|
Name |
Accession |
Description |
Interval |
E-value |
| PLN02785 |
PLN02785 |
Protein HOTHEAD |
18-594 |
0e+00 |
|
Protein HOTHEAD
Pssm-ID: 215420 [Multi-domain] Cd Length: 587 Bit Score: 1117.19 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18410230 18 LSSTASKGKEKKSKFNPYRYTFIDKASTFSSSSSSSFSsNGQDSSYDYIVIGGGTAGCPLAATLSQNFSVLVLERGGVPF 97
Cdd:PLN02785 12 LCLPTSSSSQGKSHFTPYRYPFIDKASSFSSSSSSSSS-SGGDSAYDYIVVGGGTAGCPLAATLSQNFSVLLLERGGVPF 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18410230 98 TNANVSFLRNFHIGLADISASSASQAFVSTDGVYNARARVLGGGSCINAGFYSRADAAFVKRAGWDPKLVKESYPWVERE 177
Cdd:PLN02785 91 GNANVSFLENFHIGLADTSPTSASQAFISTDGVINARARVLGGGTCINAGFYSRASTRFIQKAGWDAKLVNESYPWVERQ 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18410230 178 IVHQPKLTLWQKALRDSLLEVGVRPFNGFTYDHVSGTKIGGTIFDRFGRRHTAAELLAYANPQKLRVLIYATVQKIVFDT 257
Cdd:PLN02785 171 IVHWPKVAPWQAALRDSLLEVGVSPFNGFTYDHVYGTKVGGTIFDEFGRRHTAAELLAAGNPNKLRVLLHATVQKIVFDT 250
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18410230 258 SGTRPRVTGVIFKDEKGNQHQALLSNRKGSEVILSSGAIGSPQMLMLSGIGPKKELQRLKIPVVLENEHVGKGMADNPMN 337
Cdd:PLN02785 251 SGKRPRATGVIFKDENGNQHQAFLSNNKGSEIILSAGAIGSPQMLLLSGIGPKKELKKHKIPVVLHNEHVGKGMADNPMN 330
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18410230 338 TILVPSKAPIEQSLIQTVGITKMGVYVEASTGFGQSPESIHTHYGIMSNKNELFSTIPAKQRRPEATQAYITRNKYQLHE 417
Cdd:PLN02785 331 SIFVPSKAPVEQSLIQTVGITKMGVYIEASSGFGQSPDSIHCHHGIMSAEIGQLSTIPPKQRTPEAIQAYIHRKKNLPHE 410
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18410230 418 AFNGSFILEKLAYPISRGHLSLVNTNVDDNPSVTFNYFKHPVDLQRCVEAIRLVSKVVTSNRFLNYTQCDKQNVHKMLSL 497
Cdd:PLN02785 411 AFNGGFILEKIAGPISTGHLSLINTNVDDNPSVTFNYFKHPQDLQRCVYGIRTIEKIVKTNHFTNFTQCDKQTMEKVLNM 490
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18410230 498 SVKANINLRPKQLNDTKSMAQFCKDTVVTIWHYHGGCLVGKVVSPNRKVLGVDRLRVIDGSTFDESPGTNPQATMMMMGR 577
Cdd:PLN02785 491 SVKANINLIPKHTNDTKSLEQFCKDTVITIWHYHGGCHVGKVVDQNYKVLGVSRLRVIDGSTFDESPGTNPQATVMMMGR 570
|
570
....*....|....*..
gi 18410230 578 YMGVKILRERLGNKAGV 594
Cdd:PLN02785 571 YMGVKILRERLGRAAGV 587
|
|
| BetA |
COG2303 |
Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General ... |
60-588 |
2.10e-68 |
|
Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General function prediction only]; Choline dehydrogenase or related flavoprotein is part of the Pathway/BioSystem: Non-phosphorylated Entner-Doudoroff pathway
Pssm-ID: 441878 [Multi-domain] Cd Length: 531 Bit Score: 230.87 E-value: 2.10e-68
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18410230 60 DSSYDYIVIGGGTAGCPLAATLSQN--FSVLVLERGGV---PFTNANVSFLRNFHIGLADISASSASQAFVSTDGVYNAR 134
Cdd:COG2303 2 LEEYDYVIVGAGSAGCVLANRLSEDagLRVLLLEAGGRdddPLIRMPAGYAKLLGNPRYDWRYETEPQPGLNGRRLYWPR 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18410230 135 ARVLGGGSCINAGFYSRADAA-FVKRA-----GWdpklvkeSY----PW---VEREI--------------VHQPKL-TL 186
Cdd:COG2303 82 GKVLGGSSSINGMIYVRGQPEdFDLWAqlgnqGW-------GYddvlPYfkrAEDNErgadayhgrsgplpVSDPPLpNP 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18410230 187 WQKALRDSLLEVGVRP---FNGftydhvsGTKIGGTIFD---RFGRRHTAAEllAYANPQK----LRVLIYATVQKIVFD 256
Cdd:COG2303 155 LSDAFIEAAEELGIPRaddFNG-------GACEGCGFCQvtcRNGARWSAAR--AYLPPALkrpnLTVRTGALVTRILFD 225
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18410230 257 tsGTRprVTGVIFKDeKGNQHQAllsnRKGSEVILSSGAIGSPQMLMLSGIGPKKELQRLKIPVVLENEHVGKGMADNPM 336
Cdd:COG2303 226 --GGR--ATGVEYRD-DGEEHTV----RAAREVILAAGAINSPQLLLLSGIGPASHLREHGIPVVHDLPGVGRNLQDHLE 296
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18410230 337 NTILVPSKAPIeqSLIQTVGITKMGV-YVEASTGFGQSpeSIHTHYGIMSNKNEL------FSTIPAKQRRPEATQAYIT 409
Cdd:COG2303 297 VSVVFRFKEPV--TLNKSLRKARIGLqYLLTRSGPLTS--NVAEAGGFFRSDPGLerpdlqFHFLPLGLTPRWGKKALHD 372
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18410230 410 RNKYQLHeafnGSFIleklaYPISRGHLSLVNTNVDDNPSVTFNYFKHPVDLQRCVEAIRLVSKVVTSNRFLNYTQCDkq 489
Cdd:COG2303 373 GHGFTAH----VEQL-----RPESRGRVTLDSADPLGAPLIRPNYLSDENDRRVLVAGVRLAREIAAQPALAPYRGEE-- 441
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18410230 490 nvhkmlslsvkaninLRPKQLNDTKSMAQFCKDTVVTIWHYHGGCLVGK----VVSPNRKVLGVDRLRVIDGSTFDESPG 565
Cdd:COG2303 442 ---------------ILPGPDVQSDEELAFIRARAYTIYHPVGTCRMGTdpdsVVDPRLRVHGVENLRVVDASVMPTITS 506
|
570 580
....*....|....*....|...
gi 18410230 566 TNPQATMMMMGrYMGVKILRERL 588
Cdd:COG2303 507 GNTNAPTIMLA-EKAADMILGDY 528
|
|
| PRK02106 |
PRK02106 |
choline dehydrogenase; Validated |
60-584 |
3.59e-39 |
|
choline dehydrogenase; Validated
Pssm-ID: 235000 [Multi-domain] Cd Length: 560 Bit Score: 151.14 E-value: 3.59e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18410230 60 DSSYDYIVIGGGTAGCPLAATLSQ--NFSVLVLERGGvpfTNANVSFLRNFHIGLAD-ISASSASQAFVST-----DG-- 129
Cdd:PRK02106 3 TMEYDYIIIGAGSAGCVLANRLSEdpDVSVLLLEAGG---PDYRWDFFIQMPAALAFpLQGKRYNWAYETEpephmNNrr 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18410230 130 VYNARARVLGGGSCINAGFYSRADAAFVKRAGWDPKLVKESY----PWVER-EIVHQP-----------KLTLWQKA--- 190
Cdd:PRK02106 80 MECPRGKVLGGSSSINGMVYIRGNAMDYDNWAELPGLEGWSYadclPYFKKaETRDGGeddyrggdgplSVTRGKPGtnp 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18410230 191 LRDSLLEVGVRPfnGFTY-DHVSGTKIGG------TIFDrfGRRHTAAEllAYANPQK----LRVLIYATVQKIVFDTsg 259
Cdd:PRK02106 160 LFQAFVEAGVQA--GYPRtDDLNGYQQEGfgpmdrTVTN--GRRWSAAR--AYLDPALkrpnLTIVTHALTDRILFEG-- 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18410230 260 trPRVTGVIFkdEKGNQHQALLSNRkgsEVILSSGAIGSPQMLMLSGIGPKKELQRLKIPVVLENEHVGKGMADNPMNTI 339
Cdd:PRK02106 232 --KRAVGVEY--ERGGGRETARARR---EVILSAGAINSPQLLQLSGIGPAEHLKELGIPVVHDLPGVGENLQDHLEVYI 304
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18410230 340 LVPSKAPIE-QSLIQTVGITKMGV-YVEASTGFGQSpesihTHY---GIMSNKNEL------FSTIPAKQRR--PEATQA 406
Cdd:PRK02106 305 QYECKQPVSlYPALKWWNKPKIGAeWLFTGTGLGAS-----NHFeagGFIRSRAGVdwpniqYHFLPVAIRYdgSNAVKG 379
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18410230 407 YitrnKYQLHEAFNgsfileklaYPISRGHLSLVNTNVDDNPSVTFNYFKHPVDLQRCVEAIRLVSKVVTSNRFLNYTqc 486
Cdd:PRK02106 380 H----GFQAHVGPM---------RSPSRGSVKLKSADPRAHPSILFNYMSTEQDWREFRDAIRLTREIMAQPALDPYR-- 444
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18410230 487 dKQNVHKMLSLSVKANINlrpkqlndtksmaQFCKDTVVTIWHYHGGCLVGK----VVSPNRKVLGVDRLRVIDGSTFDE 562
Cdd:PRK02106 445 -GREISPGADVQTDEEID-------------AFVREHAETAYHPSCTCKMGTdpmaVVDPEGRVHGVEGLRVVDASIMPT 510
|
570 580
....*....|....*....|..
gi 18410230 563 SPGTNPQATMMMMGRYMGVKIL 584
Cdd:PRK02106 511 ITNGNLNAPTIMIAEKAADLIR 532
|
|
| GMC_oxred_C |
pfam05199 |
GMC oxidoreductase; This domain found associated with pfam00732. |
431-576 |
2.04e-28 |
|
GMC oxidoreductase; This domain found associated with pfam00732.
Pssm-ID: 398739 [Multi-domain] Cd Length: 143 Bit Score: 110.56 E-value: 2.04e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18410230 431 PISRGHLSLVNTNVDDNPSVTFNYFKHPVDLQRCVEAIRLVSKVVTSNRFLNYTqcdkqnvhkmlSLSVKANINLRPKQL 510
Cdd:pfam05199 1 PRSRGRVTLSSSDPTGLPVIDPNYLSDPADLAALRAALRLARRILAAAGLVLGV-----------ELTPGPVPEVSDAAV 69
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 18410230 511 NDTKSMAQFCKDTVVTIWHYHGGCLVGK-----VVSPNRKVLGVDRLRVIDGSTFDESPGTNPQATMMMMG 576
Cdd:pfam05199 70 TSDDELLAYIRAAASTSYHPMGTCRMGAdpddaVVDPDLRVHGVDNLRVVDASVFPSSPSGNPTLTIYALA 140
|
|
| GMC_oxred_N |
pfam00732 |
GMC oxidoreductase; This family of proteins bind FAD as a cofactor. |
63-335 |
4.03e-17 |
|
GMC oxidoreductase; This family of proteins bind FAD as a cofactor.
Pssm-ID: 366272 [Multi-domain] Cd Length: 218 Bit Score: 80.40 E-value: 4.03e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18410230 63 YDYIVIGGGTAGCplaatlsqnfsvlvlerggvpfTNANVSFLRnfhigladisassasqafvstdgvynaRARVLGGGS 142
Cdd:pfam00732 1 YDYLYEGGGSAGS----------------------VNGRRMILP---------------------------AGSTVGGGS 31
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18410230 143 CINAGFYSRADAAFVKR-------AGWDPKLVKESYPWVEREI-------VHQPKLTLWQKALRDSLLEVGVRP--FNGF 206
Cdd:pfam00732 32 SVNWSACIRTPAAVLDEwasefglEGWGYDDYLPYMDKVEGPLgvttkgiEESPLNQALLKAAEELGYPVEAVPrnSNGC 111
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18410230 207 TYDHVSGTKIggtifdRFGRRH-TAAELLAYANPQKLRVLIYATVQKIVFDtsGTRPRVTGVIFKDEKGNQHQALLSNRk 285
Cdd:pfam00732 112 HYCGFCGLGC------PTGAKQsTARTWLRPALERNLRILTGAKAEKIIIL--GRGGRAVGVEARDGGGGIKRLITAAK- 182
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 18410230 286 gsEVILSSGAIGSPQMLMLSGIGPKKelqrlkipvvlenEHVGKGMADNP 335
Cdd:pfam00732 183 --EVVVAAGALNTPPLLLRSGLGKNP-------------HPVGKNLQLHP 217
|
|
| DadA |
COG0665 |
Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism]; |
62-106 |
9.77e-04 |
|
Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism];
Pssm-ID: 440429 [Multi-domain] Cd Length: 364 Bit Score: 41.81 E-value: 9.77e-04
10 20 30 40
....*....|....*....|....*....|....*....|....*...
gi 18410230 62 SYDYIVIGGGTAGCPLAATLSQ-NFSVLVLERGGVPF--TNANVSFLR 106
Cdd:COG0665 2 TADVVVIGGGIAGLSTAYHLARrGLDVTVLERGRPGSgaSGRNAGQLR 49
|
|
| PTZ00367 |
PTZ00367 |
squalene epoxidase; Provisional |
63-92 |
1.30e-03 |
|
squalene epoxidase; Provisional
Pssm-ID: 240384 [Multi-domain] Cd Length: 567 Bit Score: 41.76 E-value: 1.30e-03
10 20 30
....*....|....*....|....*....|.
gi 18410230 63 YDYIVIGGGTAGCPLAATLS-QNFSVLVLER 92
Cdd:PTZ00367 34 YDVIIVGGSIAGPVLAKALSkQGRKVLMLER 64
|
|
| GG-red-SF |
TIGR02032 |
geranylgeranyl reductase family; This model represents a subfamily which includes ... |
63-96 |
2.61e-03 |
|
geranylgeranyl reductase family; This model represents a subfamily which includes geranylgeranyl reductases involved in chlorophyll and bacteriochlorophyll biosynthesis as well as other related enzymes which may also act on geranylgeranyl groups or related substrates. [Biosynthesis of cofactors, prosthetic groups, and carriers, Chlorophyll and bacteriochlorphyll]
Pssm-ID: 273936 [Multi-domain] Cd Length: 295 Bit Score: 39.99 E-value: 2.61e-03
10 20 30
....*....|....*....|....*....|....*
gi 18410230 63 YDYIVIGGGTAGCPLAATLSQ-NFSVLVLERGGVP 96
Cdd:TIGR02032 1 YDVVVVGAGPAGASAAYRLADkGLRVLLLEKKSFP 35
|
|
| LhgO |
COG0579 |
L-2-hydroxyglutarate oxidase LhgO [Carbohydrate transport and metabolism]; |
62-92 |
6.43e-03 |
|
L-2-hydroxyglutarate oxidase LhgO [Carbohydrate transport and metabolism];
Pssm-ID: 440344 [Multi-domain] Cd Length: 418 Bit Score: 39.36 E-value: 6.43e-03
10 20 30
....*....|....*....|....*....|...
gi 18410230 62 SYDYIVIGGGTAGCPLAATLSQ--NFSVLVLER 92
Cdd:COG0579 4 MYDVVIIGAGIVGLALARELSRyeDLKVLVLEK 36
|
|
| COG1233 |
COG1233 |
Phytoene dehydrogenase-related protein [Secondary metabolites biosynthesis, transport and ... |
61-96 |
7.87e-03 |
|
Phytoene dehydrogenase-related protein [Secondary metabolites biosynthesis, transport and catabolism];
Pssm-ID: 440846 [Multi-domain] Cd Length: 491 Bit Score: 39.06 E-value: 7.87e-03
10 20 30
....*....|....*....|....*....|....*....
gi 18410230 61 SSYDYIVIGGGTAGcpL--AATLSQN-FSVLVLERGGVP 96
Cdd:COG1233 2 MMYDVVVIGAGIGG--LaaAALLARAgYRVTVLEKNDTP 38
|
|
| PRK06370 |
PRK06370 |
FAD-containing oxidoreductase; |
62-93 |
8.41e-03 |
|
FAD-containing oxidoreductase;
Pssm-ID: 235787 [Multi-domain] Cd Length: 463 Bit Score: 39.03 E-value: 8.41e-03
10 20 30
....*....|....*....|....*....|...
gi 18410230 62 SYDYIVIGGGTAGCPLAATLSQ-NFSVLVLERG 93
Cdd:PRK06370 5 RYDAIVIGAGQAGPPLAARAAGlGMKVALIERG 37
|
|
| PRK06292 |
PRK06292 |
dihydrolipoamide dehydrogenase; Validated |
62-93 |
9.47e-03 |
|
dihydrolipoamide dehydrogenase; Validated
Pssm-ID: 235774 [Multi-domain] Cd Length: 460 Bit Score: 38.62 E-value: 9.47e-03
10 20 30
....*....|....*....|....*....|...
gi 18410230 62 SYDYIVIGGGTAGCPLAATLSQN-FSVLVLERG 93
Cdd:PRK06292 3 KYDVIVIGAGPAGYVAARRAAKLgKKVALIEKG 35
|
|
|