NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|22330418|ref|NP_564831|]
View 

1-acyl-sn-glycerol-3-phosphate acyltransferase [Arabidopsis thaliana]

Protein Classification

DUF3593 domain-containing protein( domain architecture ID 10573064)

DUF3593 domain-containing protein

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
DUF3593 pfam12159
Protein of unknown function (DUF3593); This family of proteins is functionally uncharacterized. ...
 85-172 4.36e-48

Protein of unknown function (DUF3593); This family of proteins is functionally uncharacterized.This family of proteins is found in bacteria and eukaryotes. Proteins in this family are typically between 98 and 228 amino acids in length. There is a conserved LHG sequence motif.


:

Pssm-ID: 463477  Cd Length: 88  Bit Score: 151.96  E-value: 4.36e-48
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22330418    85 ASQLFAVSLFPYIGFLYFLTKSKSAPKLTLFGFYFLLAFVGATIPAGIYAKVHYGTSLSNVDWLHGGAESLLALTNLFIV 164
Cdd:pfam12159   1 ASPLFALSLFPYLGFLWFLTRSKSFPRLTLFGFYFLLVFVAVTIPAGIYAKVVYGESLANVDWLHGLAESFLTLSNLLIV 80


                  ....*...
gi 22330418   165 LGLRQALR 172
Cdd:pfam12159  81 LGFRQALK 88
 
Name Accession Description Interval E-value
DUF3593 pfam12159
Protein of unknown function (DUF3593); This family of proteins is functionally uncharacterized. ...
 85-172 4.36e-48

Protein of unknown function (DUF3593); This family of proteins is functionally uncharacterized.This family of proteins is found in bacteria and eukaryotes. Proteins in this family are typically between 98 and 228 amino acids in length. There is a conserved LHG sequence motif.


Pssm-ID: 463477  Cd Length: 88  Bit Score: 151.96  E-value: 4.36e-48
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22330418    85 ASQLFAVSLFPYIGFLYFLTKSKSAPKLTLFGFYFLLAFVGATIPAGIYAKVHYGTSLSNVDWLHGGAESLLALTNLFIV 164
Cdd:pfam12159   1 ASPLFALSLFPYLGFLWFLTRSKSFPRLTLFGFYFLLVFVAVTIPAGIYAKVVYGESLANVDWLHGLAESFLTLSNLLIV 80


                  ....*...
gi 22330418   165 LGLRQALR 172
Cdd:pfam12159  81 LGFRQALK 88
 
Name Accession Description Interval E-value
DUF3593 pfam12159
Protein of unknown function (DUF3593); This family of proteins is functionally uncharacterized. ...
 85-172 4.36e-48

Protein of unknown function (DUF3593); This family of proteins is functionally uncharacterized.This family of proteins is found in bacteria and eukaryotes. Proteins in this family are typically between 98 and 228 amino acids in length. There is a conserved LHG sequence motif.


Pssm-ID: 463477  Cd Length: 88  Bit Score: 151.96  E-value: 4.36e-48
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22330418    85 ASQLFAVSLFPYIGFLYFLTKSKSAPKLTLFGFYFLLAFVGATIPAGIYAKVHYGTSLSNVDWLHGGAESLLALTNLFIV 164
Cdd:pfam12159   1 ASPLFALSLFPYLGFLWFLTRSKSFPRLTLFGFYFLLVFVAVTIPAGIYAKVVYGESLANVDWLHGLAESFLTLSNLLIV 80


                  ....*...
gi 22330418   165 LGLRQALR 172
Cdd:pfam12159  81 LGFRQALK 88
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH