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Conserved domains on  [gi|18397116|ref|NP_564331|]
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SAUR-like auxin-responsive protein family [Arabidopsis thaliana]

Protein Classification

SAUR-like auxin-responsive family protein( domain architecture ID 10494974)

SAUR-like auxin-responsive family protein similar to Arabidopsis thaliana SAUR proteins that may provide a mechanistic link between auxin and plasma membrane H+-ATPases (PM H+-ATPases)

Gene Ontology:  GO:0009733

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Auxin_inducible pfam02519
Auxin responsive protein; This family consists of the protein products of the ARG7 auxin ...
 7-95 4.49e-32

Auxin responsive protein; This family consists of the protein products of the ARG7 auxin responsive genes family none of which have any identified functional role.


:

Pssm-ID: 460580  Cd Length: 92  Bit Score: 107.72  E-value: 4.49e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18397116     7 LMKMAKKWQQRAALRRKRISFQRSNSTTSsssAVEKGCFVVYTADQV-RFAFPISYLSNSVIQELLKISEEEFGIPTEGP 85
Cdd:pfam02519   1 LKQMARKWQKRAALGRKRISSPRTTSSSD---VPEKGHFVVYVGDERrRFVVPLEYLNHPLFRELLRMSEEEFGFPSDGP 77

                          90
                  ....*....|
gi 18397116    86 ITLPFDSIRF 95
Cdd:pfam02519  78 ITLPCDVVVF 87
 
Name Accession Description Interval E-value
Auxin_inducible pfam02519
Auxin responsive protein; This family consists of the protein products of the ARG7 auxin ...
 7-95 4.49e-32

Auxin responsive protein; This family consists of the protein products of the ARG7 auxin responsive genes family none of which have any identified functional role.


Pssm-ID: 460580  Cd Length: 92  Bit Score: 107.72  E-value: 4.49e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18397116     7 LMKMAKKWQQRAALRRKRISFQRSNSTTSsssAVEKGCFVVYTADQV-RFAFPISYLSNSVIQELLKISEEEFGIPTEGP 85
Cdd:pfam02519   1 LKQMARKWQKRAALGRKRISSPRTTSSSD---VPEKGHFVVYVGDERrRFVVPLEYLNHPLFRELLRMSEEEFGFPSDGP 77

                          90
                  ....*....|
gi 18397116    86 ITLPFDSIRF 95
Cdd:pfam02519  78 ITLPCDVVVF 87
PLN03090 PLN03090
auxin-responsive family protein; Provisional
 40-95 2.73e-08

auxin-responsive family protein; Provisional


Pssm-ID: 178639  Cd Length: 104  Bit Score: 47.46  E-value: 2.73e-08
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 18397116   40 VEKGCFVVYTA-DQVRFAFPISYLSNSVIQELLKISEEEFGIPTEGPITLPFDSIRF 95
Cdd:PLN03090  40 VPKGHFPVYVGeNRSRYIVPISFLTHPEFQSLLQQAEEEFGFDHDMGLTIPCEEVVF 96
 
Name Accession Description Interval E-value
Auxin_inducible pfam02519
Auxin responsive protein; This family consists of the protein products of the ARG7 auxin ...
 7-95 4.49e-32

Auxin responsive protein; This family consists of the protein products of the ARG7 auxin responsive genes family none of which have any identified functional role.


Pssm-ID: 460580  Cd Length: 92  Bit Score: 107.72  E-value: 4.49e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18397116     7 LMKMAKKWQQRAALRRKRISFQRSNSTTSsssAVEKGCFVVYTADQV-RFAFPISYLSNSVIQELLKISEEEFGIPTEGP 85
Cdd:pfam02519   1 LKQMARKWQKRAALGRKRISSPRTTSSSD---VPEKGHFVVYVGDERrRFVVPLEYLNHPLFRELLRMSEEEFGFPSDGP 77

                          90
                  ....*....|
gi 18397116    86 ITLPFDSIRF 95
Cdd:pfam02519  78 ITLPCDVVVF 87
PLN03090 PLN03090
auxin-responsive family protein; Provisional
 40-95 2.73e-08

auxin-responsive family protein; Provisional


Pssm-ID: 178639  Cd Length: 104  Bit Score: 47.46  E-value: 2.73e-08
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 18397116   40 VEKGCFVVYTA-DQVRFAFPISYLSNSVIQELLKISEEEFGIPTEGPITLPFDSIRF 95
Cdd:PLN03090  40 VPKGHFPVYVGeNRSRYIVPISFLTHPEFQSLLQQAEEEFGFDHDMGLTIPCEEVVF 96
PLN03219 PLN03219
uncharacterized protein; Provisional
 40-102 7.61e-06

uncharacterized protein; Provisional


Pssm-ID: 178758 [Multi-domain]  Cd Length: 108  Bit Score: 41.27  E-value: 7.61e-06
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 18397116   40 VEKGCFVVYTADQV---RFAFPISYLSNSVIQELLKISEEEFGI-PTEGPITLPFDSIRFSWSISSN 102
Cdd:PLN03219  39 VPKGHVAVYVGEQMekkRFVVPISYLNHPLFREFLNRAEEECGFhHSMGGLTIPCREESFLHLITSH 105
PLN03220 PLN03220
uncharacterized protein; Provisional
 40-89 1.64e-04

uncharacterized protein; Provisional


Pssm-ID: 178759  Cd Length: 105  Bit Score: 37.80  E-value: 1.64e-04
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 18397116   40 VEKGCFVVYTADQV-----RFAFPISYLSNSVIQELLKISEEEFGIPTE-GPITLP 89
Cdd:PLN03220  35 VPKGHVAVYVGEQIemekkRFVVPISFLNHPSFKEFLSRAEEEFGFNHPmGGLTIP 90
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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