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Conserved domains on  [gi|18394403|ref|NP_564006|]
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7-dehydrocholesterol reductase-like protein [Arabidopsis thaliana]

Protein Classification

DUF1754 domain-containing protein( domain architecture ID 10554084)

DUF1754 domain-containing protein similar to Schizosaccharomyces pombe protein C31G5.21

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
FAM32A pfam08555
FAM32A; FAM32A, also known as OTAG12, has been linked to ovarian tumour in humans and mice.
 3-108 3.69e-06

FAM32A; FAM32A, also known as OTAG12, has been linked to ovarian tumour in humans and mice.


:

Pssm-ID: 369948  Cd Length: 91  Bit Score: 42.81  E-value: 3.69e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18394403     3 AYDNVIGGKLKLKGKALdvkaGGVKKKKKHKRQEEQALKITDHELIEGESTEAlgkliegeegdEEMNRSEKASEDAKLQ 82
Cdd:pfam08555   1 EYSNVVGGKLKLKGKKI----VKVKKKKKKKKKKSKSKEEVITEKEEEEKSSA-----------ESDDKSGKADGDNERI 65

                          90       100
                  ....*....|....*....|....*.
gi 18394403    83 QQLDDDDHLTPAERRYIEQKQRLDVQ 108
Cdd:pfam08555  66 EKEEDGMNLTEAERAFEEAQKKRLKE 91
 
Name Accession Description Interval E-value
FAM32A pfam08555
FAM32A; FAM32A, also known as OTAG12, has been linked to ovarian tumour in humans and mice.
 3-108 3.69e-06

FAM32A; FAM32A, also known as OTAG12, has been linked to ovarian tumour in humans and mice.


Pssm-ID: 369948  Cd Length: 91  Bit Score: 42.81  E-value: 3.69e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18394403     3 AYDNVIGGKLKLKGKALdvkaGGVKKKKKHKRQEEQALKITDHELIEGESTEAlgkliegeegdEEMNRSEKASEDAKLQ 82
Cdd:pfam08555   1 EYSNVVGGKLKLKGKKI----VKVKKKKKKKKKKSKSKEEVITEKEEEEKSSA-----------ESDDKSGKADGDNERI 65

                          90       100
                  ....*....|....*....|....*.
gi 18394403    83 QQLDDDDHLTPAERRYIEQKQRLDVQ 108
Cdd:pfam08555  66 EKEEDGMNLTEAERAFEEAQKKRLKE 91
 
Name Accession Description Interval E-value
FAM32A pfam08555
FAM32A; FAM32A, also known as OTAG12, has been linked to ovarian tumour in humans and mice.
 3-108 3.69e-06

FAM32A; FAM32A, also known as OTAG12, has been linked to ovarian tumour in humans and mice.


Pssm-ID: 369948  Cd Length: 91  Bit Score: 42.81  E-value: 3.69e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18394403     3 AYDNVIGGKLKLKGKALdvkaGGVKKKKKHKRQEEQALKITDHELIEGESTEAlgkliegeegdEEMNRSEKASEDAKLQ 82
Cdd:pfam08555   1 EYSNVVGGKLKLKGKKI----VKVKKKKKKKKKKSKSKEEVITEKEEEEKSSA-----------ESDDKSGKADGDNERI 65

                          90       100
                  ....*....|....*....|....*.
gi 18394403    83 QQLDDDDHLTPAERRYIEQKQRLDVQ 108
Cdd:pfam08555  66 EKEEDGMNLTEAERAFEEAQKKRLKE 91
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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