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Conserved domains on  [gi|18394220|ref|NP_563969|]
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Translation machinery associated TMA7 [Arabidopsis thaliana]

Protein Classification

translation machinery-associated protein 7( domain architecture ID 10557399)

translation machinery-associated protein 7 (TMA7) may be involved in protein synthesis

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
TMA7 pfam09072
Translation machinery associated TMA7; TMA7 plays a role in protein translation. Deletions of ...
3-64 8.47e-15

Translation machinery associated TMA7; TMA7 plays a role in protein translation. Deletions of the TMA7 gene results in altered protein synthesis rates.


:

Pssm-ID: 462671  Cd Length: 62  Bit Score: 61.52  E-value: 8.47e-15
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 18394220    3 SKQGGKAKPLKQPKADKKEYDETDLANIQKKKDEEKALKELRAKASQKGSFGGSGLKKSGKK 64
Cdd:pfam09072  1 GRQGGKKKPLKAPKKQAKELDEDDLAFKQKQKEEAKALKELKAKAKGKGPLGGGGIKKSGKK 62
 
Name Accession Description Interval E-value
TMA7 pfam09072
Translation machinery associated TMA7; TMA7 plays a role in protein translation. Deletions of ...
3-64 8.47e-15

Translation machinery associated TMA7; TMA7 plays a role in protein translation. Deletions of the TMA7 gene results in altered protein synthesis rates.


Pssm-ID: 462671  Cd Length: 62  Bit Score: 61.52  E-value: 8.47e-15
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 18394220    3 SKQGGKAKPLKQPKADKKEYDETDLANIQKKKDEEKALKELRAKASQKGSFGGSGLKKSGKK 64
Cdd:pfam09072  1 GRQGGKKKPLKAPKKQAKELDEDDLAFKQKQKEEAKALKELKAKAKGKGPLGGGGIKKSGKK 62
 
Name Accession Description Interval E-value
TMA7 pfam09072
Translation machinery associated TMA7; TMA7 plays a role in protein translation. Deletions of ...
3-64 8.47e-15

Translation machinery associated TMA7; TMA7 plays a role in protein translation. Deletions of the TMA7 gene results in altered protein synthesis rates.


Pssm-ID: 462671  Cd Length: 62  Bit Score: 61.52  E-value: 8.47e-15
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 18394220    3 SKQGGKAKPLKQPKADKKEYDETDLANIQKKKDEEKALKELRAKASQKGSFGGSGLKKSGKK 64
Cdd:pfam09072  1 GRQGGKKKPLKAPKKQAKELDEDDLAFKQKQKEEAKALKELKAKAKGKGPLGGGGIKKSGKK 62
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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