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Conserved domains on  [gi|30678304|ref|NP_563653|]
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NIM1-interacting 1 [Arabidopsis thaliana]

Protein Classification

NPR1_interact domain-containing protein( domain architecture ID 11238908)

NPR1_interact domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
NPR1_interact pfam15699
NPR1 interacting; This family of proteins interacts via a motif at the C-terminus with the ...
 44-138 3.76e-22

NPR1 interacting; This family of proteins interacts via a motif at the C-terminus with the regulatory protein NPR1.


:

Pssm-ID: 464810  Cd Length: 108  Bit Score: 84.46  E-value: 3.76e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30678304    44 KKIDTFFKLIKHYQEARKRRR-EELAENSGVVRRKSNGGERSGIVVPAFQPEDFSQCRTGLKPPLMFVSDHKEENTKV-- 120
Cdd:pfam15699   7 EKMEKFFALIRNIRDARDRRRkEELTDSKGKKKEKEEKRSASGIWVPSFEPEDFIGEDEFLKPSNSVNNDEKKQDEKEse 86

                          90       100
                  ....*....|....*....|..
gi 30678304   121 EQEEDQTEERNE----DKALDL 138
Cdd:pfam15699  87 EGEPEAKKEGKEgdekDHGLDL 108
 
Name Accession Description Interval E-value
NPR1_interact pfam15699
NPR1 interacting; This family of proteins interacts via a motif at the C-terminus with the ...
 44-138 3.76e-22

NPR1 interacting; This family of proteins interacts via a motif at the C-terminus with the regulatory protein NPR1.


Pssm-ID: 464810  Cd Length: 108  Bit Score: 84.46  E-value: 3.76e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30678304    44 KKIDTFFKLIKHYQEARKRRR-EELAENSGVVRRKSNGGERSGIVVPAFQPEDFSQCRTGLKPPLMFVSDHKEENTKV-- 120
Cdd:pfam15699   7 EKMEKFFALIRNIRDARDRRRkEELTDSKGKKKEKEEKRSASGIWVPSFEPEDFIGEDEFLKPSNSVNNDEKKQDEKEse 86

                          90       100
                  ....*....|....*....|..
gi 30678304   121 EQEEDQTEERNE----DKALDL 138
Cdd:pfam15699  87 EGEPEAKKEGKEgdekDHGLDL 108
 
Name Accession Description Interval E-value
NPR1_interact pfam15699
NPR1 interacting; This family of proteins interacts via a motif at the C-terminus with the ...
 44-138 3.76e-22

NPR1 interacting; This family of proteins interacts via a motif at the C-terminus with the regulatory protein NPR1.


Pssm-ID: 464810  Cd Length: 108  Bit Score: 84.46  E-value: 3.76e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30678304    44 KKIDTFFKLIKHYQEARKRRR-EELAENSGVVRRKSNGGERSGIVVPAFQPEDFSQCRTGLKPPLMFVSDHKEENTKV-- 120
Cdd:pfam15699   7 EKMEKFFALIRNIRDARDRRRkEELTDSKGKKKEKEEKRSASGIWVPSFEPEDFIGEDEFLKPSNSVNNDEKKQDEKEse 86

                          90       100
                  ....*....|....*....|..
gi 30678304   121 EQEEDQTEERNE----DKALDL 138
Cdd:pfam15699  87 EGEPEAKKEGKEgdekDHGLDL 108
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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