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Conserved domains on  [gi|18129620|ref|NP_542438|]
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uncharacterized protein Dmel_CG3430 [Drosophila melanogaster]

Protein Classification

mini-chromosome maintenance complex-binding protein( domain architecture ID 10560849)

mini-chromosome maintenance (MCM) complex-binding protein is an associated component of the MCM complex that acts as a regulator of DNA replication; it binds to the MCM complex and promotes its disassembly from chromatin, thereby acting as a key regulator of the pre-replication complex (pre-RC) unloading from replicated DNA

Gene Ontology:  GO:0003682|GO:0006261
PubMed:  21196493

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
MCM_bind pfam09739
Mini-chromosome maintenance replisome factor; This entry is of proteins of approximately 600 ...
24-590 0e+00

Mini-chromosome maintenance replisome factor; This entry is of proteins of approximately 600 residues in length containing alternating regions of conservation and low complexity. The Arabidopsis protein is a replisome factor found to bind with the mini-chromosome maintenance, MCM-binding, complex and is crucial for efficient DNA replication. The family now spans the full-length proteins.


:

Pssm-ID: 462870  Cd Length: 572  Bit Score: 828.05  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18129620    24 LKDLLKDPSRWHSIPLLNYTPLHKLKDQTLVRFRGMIQDMMDPEIYLERYEVKSAD-GSKRVQEGKYRDCLKIANGEVID 102
Cdd:pfam09739   1 FKEKLKDDSILSSIPLLNDVPLHNLKPNTLVRFRCMIQDMFDPEFYLGAYEVKNTTtGESRWRTGKYRDVAECPSQEEVD 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18129620   103 YNADGNVHGERRTMFVVSVPGLNDWSKEHEKLCCPQIDLASLGQSPSSAKKRTIVGEEEAMDVDVASETTF----KRPCL 178
Cdd:pfam09739  81 FNSESNVTWERQTLYCVPIPGENSWVKEHEENNNSQARVESSTSTSSNREKRSREEDDEEMDVDVSEDKTEisssEGACE 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18129620   179 KEIQKDSEPVGASKSS-VLGSDYLINSPLPDRPSMACMVKVYEEFDTYQLNSLVDFVGFLSVDASLDAATLEIDDC-ENL 256
Cdd:pfam09739 161 SKRSETDTPSSASASSsVSSADYLLNFPLPGEPGPACLVKVYDDPDEFKLNDVLEFVGVLSVDPALSAISDDSDDLmDTL 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18129620   257 SELQAAHPSPFLIPRLHAFGVQVLPHANPLLDKSlrQPTEICEETYPTHLAVHKDLRMLLKLCLFDDDLAAEYLLSHLIS 336
Cdd:pfam09739 241 EEDQAHNPPPSLVPRLHAIIVRKLSHNNPLLNNS--PNSNFEPSFPELAAAIREELLDHLTHLLGGDELAAEYLLLHLIS 318
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18129620   337 TVYSRSEMQSIGKFALNLCNLPK-NCEAYATKLYQILELLLPASHYMPMTLVTLNTAAFAPKKDYETNKLVSGVLQLAPH 415
Cdd:pfam09739 319 RVYSRRDVLALGKFSLNLSGLPKeSLSVFTKQLYQAIQQLVPKSHYLPMTLENLNTLRFIPKKDYTTNRLVSGVLQLAPG 398
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18129620   416 THLVLDETCMQQGKLEANGVHAVQHLAHLINNQELKCDFQYYQIDYQANIPVLVLSEGRSMLPSDFVLPINADSKAVELV 495
Cdd:pfam09739 399 THLVLDETQLQQGQLDSTGVENVTALKNLIEWQKVEYDFEYYQMEFPTDIPVLVLSEGKSMLPSDCQVPLQPDSSPSELV 478
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18129620   496 DESLKAAHHYlQPSRLQQFRKYLTTARTSGFNVSEEHTEMIQQDFVDMRKANVKSNADDLHGLLVLSRLLGIARGKDTLD 575
Cdd:pfam09739 479 EEYLEAAHHY-TPELLNKFRIYLTTARLLDYSISEEMTKAIEDDFVAMRQADRKVSADDLHRLLVLARLLSLSYGETTLS 557
                         570
                  ....*....|....*
gi 18129620   576 KETWQLATEFEAKRR 590
Cdd:pfam09739 558 LEHWQRAKELERLRK 572
 
Name Accession Description Interval E-value
MCM_bind pfam09739
Mini-chromosome maintenance replisome factor; This entry is of proteins of approximately 600 ...
24-590 0e+00

Mini-chromosome maintenance replisome factor; This entry is of proteins of approximately 600 residues in length containing alternating regions of conservation and low complexity. The Arabidopsis protein is a replisome factor found to bind with the mini-chromosome maintenance, MCM-binding, complex and is crucial for efficient DNA replication. The family now spans the full-length proteins.


Pssm-ID: 462870  Cd Length: 572  Bit Score: 828.05  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18129620    24 LKDLLKDPSRWHSIPLLNYTPLHKLKDQTLVRFRGMIQDMMDPEIYLERYEVKSAD-GSKRVQEGKYRDCLKIANGEVID 102
Cdd:pfam09739   1 FKEKLKDDSILSSIPLLNDVPLHNLKPNTLVRFRCMIQDMFDPEFYLGAYEVKNTTtGESRWRTGKYRDVAECPSQEEVD 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18129620   103 YNADGNVHGERRTMFVVSVPGLNDWSKEHEKLCCPQIDLASLGQSPSSAKKRTIVGEEEAMDVDVASETTF----KRPCL 178
Cdd:pfam09739  81 FNSESNVTWERQTLYCVPIPGENSWVKEHEENNNSQARVESSTSTSSNREKRSREEDDEEMDVDVSEDKTEisssEGACE 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18129620   179 KEIQKDSEPVGASKSS-VLGSDYLINSPLPDRPSMACMVKVYEEFDTYQLNSLVDFVGFLSVDASLDAATLEIDDC-ENL 256
Cdd:pfam09739 161 SKRSETDTPSSASASSsVSSADYLLNFPLPGEPGPACLVKVYDDPDEFKLNDVLEFVGVLSVDPALSAISDDSDDLmDTL 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18129620   257 SELQAAHPSPFLIPRLHAFGVQVLPHANPLLDKSlrQPTEICEETYPTHLAVHKDLRMLLKLCLFDDDLAAEYLLSHLIS 336
Cdd:pfam09739 241 EEDQAHNPPPSLVPRLHAIIVRKLSHNNPLLNNS--PNSNFEPSFPELAAAIREELLDHLTHLLGGDELAAEYLLLHLIS 318
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18129620   337 TVYSRSEMQSIGKFALNLCNLPK-NCEAYATKLYQILELLLPASHYMPMTLVTLNTAAFAPKKDYETNKLVSGVLQLAPH 415
Cdd:pfam09739 319 RVYSRRDVLALGKFSLNLSGLPKeSLSVFTKQLYQAIQQLVPKSHYLPMTLENLNTLRFIPKKDYTTNRLVSGVLQLAPG 398
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18129620   416 THLVLDETCMQQGKLEANGVHAVQHLAHLINNQELKCDFQYYQIDYQANIPVLVLSEGRSMLPSDFVLPINADSKAVELV 495
Cdd:pfam09739 399 THLVLDETQLQQGQLDSTGVENVTALKNLIEWQKVEYDFEYYQMEFPTDIPVLVLSEGKSMLPSDCQVPLQPDSSPSELV 478
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18129620   496 DESLKAAHHYlQPSRLQQFRKYLTTARTSGFNVSEEHTEMIQQDFVDMRKANVKSNADDLHGLLVLSRLLGIARGKDTLD 575
Cdd:pfam09739 479 EEYLEAAHHY-TPELLNKFRIYLTTARLLDYSISEEMTKAIEDDFVAMRQADRKVSADDLHRLLVLARLLSLSYGETTLS 557
                         570
                  ....*....|....*
gi 18129620   576 KETWQLATEFEAKRR 590
Cdd:pfam09739 558 LEHWQRAKELERLRK 572
 
Name Accession Description Interval E-value
MCM_bind pfam09739
Mini-chromosome maintenance replisome factor; This entry is of proteins of approximately 600 ...
24-590 0e+00

Mini-chromosome maintenance replisome factor; This entry is of proteins of approximately 600 residues in length containing alternating regions of conservation and low complexity. The Arabidopsis protein is a replisome factor found to bind with the mini-chromosome maintenance, MCM-binding, complex and is crucial for efficient DNA replication. The family now spans the full-length proteins.


Pssm-ID: 462870  Cd Length: 572  Bit Score: 828.05  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18129620    24 LKDLLKDPSRWHSIPLLNYTPLHKLKDQTLVRFRGMIQDMMDPEIYLERYEVKSAD-GSKRVQEGKYRDCLKIANGEVID 102
Cdd:pfam09739   1 FKEKLKDDSILSSIPLLNDVPLHNLKPNTLVRFRCMIQDMFDPEFYLGAYEVKNTTtGESRWRTGKYRDVAECPSQEEVD 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18129620   103 YNADGNVHGERRTMFVVSVPGLNDWSKEHEKLCCPQIDLASLGQSPSSAKKRTIVGEEEAMDVDVASETTF----KRPCL 178
Cdd:pfam09739  81 FNSESNVTWERQTLYCVPIPGENSWVKEHEENNNSQARVESSTSTSSNREKRSREEDDEEMDVDVSEDKTEisssEGACE 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18129620   179 KEIQKDSEPVGASKSS-VLGSDYLINSPLPDRPSMACMVKVYEEFDTYQLNSLVDFVGFLSVDASLDAATLEIDDC-ENL 256
Cdd:pfam09739 161 SKRSETDTPSSASASSsVSSADYLLNFPLPGEPGPACLVKVYDDPDEFKLNDVLEFVGVLSVDPALSAISDDSDDLmDTL 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18129620   257 SELQAAHPSPFLIPRLHAFGVQVLPHANPLLDKSlrQPTEICEETYPTHLAVHKDLRMLLKLCLFDDDLAAEYLLSHLIS 336
Cdd:pfam09739 241 EEDQAHNPPPSLVPRLHAIIVRKLSHNNPLLNNS--PNSNFEPSFPELAAAIREELLDHLTHLLGGDELAAEYLLLHLIS 318
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18129620   337 TVYSRSEMQSIGKFALNLCNLPK-NCEAYATKLYQILELLLPASHYMPMTLVTLNTAAFAPKKDYETNKLVSGVLQLAPH 415
Cdd:pfam09739 319 RVYSRRDVLALGKFSLNLSGLPKeSLSVFTKQLYQAIQQLVPKSHYLPMTLENLNTLRFIPKKDYTTNRLVSGVLQLAPG 398
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18129620   416 THLVLDETCMQQGKLEANGVHAVQHLAHLINNQELKCDFQYYQIDYQANIPVLVLSEGRSMLPSDFVLPINADSKAVELV 495
Cdd:pfam09739 399 THLVLDETQLQQGQLDSTGVENVTALKNLIEWQKVEYDFEYYQMEFPTDIPVLVLSEGKSMLPSDCQVPLQPDSSPSELV 478
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18129620   496 DESLKAAHHYlQPSRLQQFRKYLTTARTSGFNVSEEHTEMIQQDFVDMRKANVKSNADDLHGLLVLSRLLGIARGKDTLD 575
Cdd:pfam09739 479 EEYLEAAHHY-TPELLNKFRIYLTTARLLDYSISEEMTKAIEDDFVAMRQADRKVSADDLHRLLVLARLLSLSYGETTLS 557
                         570
                  ....*....|....*
gi 18129620   576 KETWQLATEFEAKRR 590
Cdd:pfam09739 558 LEHWQRAKELERLRK 572
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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