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Conserved domains on  [gi|392928093|ref|NP_510555|]
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G-protein coupled receptors family 1 profile domain-containing protein [Caenorhabditis elegans]

Protein Classification

G-protein coupled receptor( domain architecture ID 11606548)

G-protein coupled receptor (GPCR) transmits physiological signals from the outside of the cell to the inside by binding to an extracellular agonist, which induces conformational changes that lead to the activation of heterotrimeric G proteins, which then bind to and activate numerous downstream effector proteins

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
7tmA_FMRFamide_R-like cd14978
FMRFamide (Phe-Met-Arg-Phe) receptors and related proteins, member of the class A family of ...
30-380 2.50e-59

FMRFamide (Phe-Met-Arg-Phe) receptors and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes Drosophila melanogaster G-protein coupled FMRFamide (Phe-Met-Arg-Phe-NH2) receptor DrmFMRFa-R and related invertebrate receptors, as well as the vertebrate proteins GPR139 and GPR142. DrmFMRFa-R binds with high affinity to FMRFamide and intrinsic FMRFamide-related peptides. FMRFamide is a neuropeptide from the family of FMRFamide-related peptides (FaRPs), which all containing a C-terminal RFamide (Arg-Phe-NH2) motif and have diverse functions in the central and peripheral nervous systems. FMRFamide is an important neuropeptide in many types of invertebrates such as insects, nematodes, molluscs, and worms. In invertebrates, the FMRFamide-related peptides are involved in the regulation of heart rate, blood pressure, gut motility, feeding behavior, and reproduction. On the other hand, in vertebrates such as mice, they play a role in the modulation of morphine-induced antinociception. Orphan receptors GPR139 and GPR142 are very closely related G protein-coupled receptors, but they have different expression patterns in the brain and in other tissues. These receptors couple to inhibitory G proteins and activate phospholipase C. Studies suggested that dimer formation may be required for their proper function. GPR142 is predominantly expressed in pancreatic beta-cells and mediates enhancement of glucose-stimulated insulin secretion, whereas GPR139 is mostly expressed in the brain and is suggested to play a role in the control of locomotor activity. Tryptophan and phenylalanine have been identified as putative endogenous ligands of GPR139.


:

Pssm-ID: 410630 [Multi-domain]  Cd Length: 299  Bit Score: 198.24  E-value: 2.50e-59
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392928093  30 PMYGYMMPFIVTLTVATNSFIVVVLSHKYLRTPTNYVLLAMAVTELLTGLSCLPWFTYYYTLSGYKNDLqtglpSFWCDM 109
Cdd:cd14978    1 VLYGYVLPVICIFGIIGNILNLVVLTRKSMRSSTNVYLAALAVSDILVLLSALPLFLLPYIADYSSSFL-----SYFYAY 75
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392928093 110 IPYMAAFLPSIFHTMAIWLTVYLAIQRYIYICVPSLVRKFCTIHRSKQVIFFIISVATIMYTPdlMAFHNKSHDVFDSkr 189
Cdd:cd14978   76 FLPYIYPLANTFQTASVWLTVALTVERYIAVCHPLKARTWCTPRRARRVILIIIIFSLLLNLP--RFFEYEVVECENC-- 151
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392928093 190 nrtMKLCYRHRAPFMLKLGDDIYYKVMFTTQTVAVHLIPSVLLVIFTWKLVGAIRVADRRHANLLSKYSTTTRSTRRkfs 269
Cdd:cd14978  152 ---NNNSYYYVIPTLLRQNETYLLKYYFWLYAIFVVLLPFILLLILNILLIRALRKSKKRRRLLRRRRRLLSRSQRR--- 225
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392928093 270 eltnssenENKItrlfkqrdsvsvgneprrahglkqnTRMLVVVILLFLITEIPAALIFTIHVLSVslkfSFVDYQFLNI 349
Cdd:cd14978  226 --------ERRT-------------------------TIMLIAVVIVFLICNLPAGILNILEAIFG----ESFLSPIYQL 268
                        330       340       350
                 ....*....|....*....|....*....|.
gi 392928093 350 LLIVRNVLIVVSYPFRFAIYCGMSQQFRDVV 380
Cdd:cd14978  269 LGDISNLLVVLNSAVNFIIYCLFSSKFRRTF 299
 
Name Accession Description Interval E-value
7tmA_FMRFamide_R-like cd14978
FMRFamide (Phe-Met-Arg-Phe) receptors and related proteins, member of the class A family of ...
30-380 2.50e-59

FMRFamide (Phe-Met-Arg-Phe) receptors and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes Drosophila melanogaster G-protein coupled FMRFamide (Phe-Met-Arg-Phe-NH2) receptor DrmFMRFa-R and related invertebrate receptors, as well as the vertebrate proteins GPR139 and GPR142. DrmFMRFa-R binds with high affinity to FMRFamide and intrinsic FMRFamide-related peptides. FMRFamide is a neuropeptide from the family of FMRFamide-related peptides (FaRPs), which all containing a C-terminal RFamide (Arg-Phe-NH2) motif and have diverse functions in the central and peripheral nervous systems. FMRFamide is an important neuropeptide in many types of invertebrates such as insects, nematodes, molluscs, and worms. In invertebrates, the FMRFamide-related peptides are involved in the regulation of heart rate, blood pressure, gut motility, feeding behavior, and reproduction. On the other hand, in vertebrates such as mice, they play a role in the modulation of morphine-induced antinociception. Orphan receptors GPR139 and GPR142 are very closely related G protein-coupled receptors, but they have different expression patterns in the brain and in other tissues. These receptors couple to inhibitory G proteins and activate phospholipase C. Studies suggested that dimer formation may be required for their proper function. GPR142 is predominantly expressed in pancreatic beta-cells and mediates enhancement of glucose-stimulated insulin secretion, whereas GPR139 is mostly expressed in the brain and is suggested to play a role in the control of locomotor activity. Tryptophan and phenylalanine have been identified as putative endogenous ligands of GPR139.


Pssm-ID: 410630 [Multi-domain]  Cd Length: 299  Bit Score: 198.24  E-value: 2.50e-59
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392928093  30 PMYGYMMPFIVTLTVATNSFIVVVLSHKYLRTPTNYVLLAMAVTELLTGLSCLPWFTYYYTLSGYKNDLqtglpSFWCDM 109
Cdd:cd14978    1 VLYGYVLPVICIFGIIGNILNLVVLTRKSMRSSTNVYLAALAVSDILVLLSALPLFLLPYIADYSSSFL-----SYFYAY 75
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392928093 110 IPYMAAFLPSIFHTMAIWLTVYLAIQRYIYICVPSLVRKFCTIHRSKQVIFFIISVATIMYTPdlMAFHNKSHDVFDSkr 189
Cdd:cd14978   76 FLPYIYPLANTFQTASVWLTVALTVERYIAVCHPLKARTWCTPRRARRVILIIIIFSLLLNLP--RFFEYEVVECENC-- 151
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392928093 190 nrtMKLCYRHRAPFMLKLGDDIYYKVMFTTQTVAVHLIPSVLLVIFTWKLVGAIRVADRRHANLLSKYSTTTRSTRRkfs 269
Cdd:cd14978  152 ---NNNSYYYVIPTLLRQNETYLLKYYFWLYAIFVVLLPFILLLILNILLIRALRKSKKRRRLLRRRRRLLSRSQRR--- 225
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392928093 270 eltnssenENKItrlfkqrdsvsvgneprrahglkqnTRMLVVVILLFLITEIPAALIFTIHVLSVslkfSFVDYQFLNI 349
Cdd:cd14978  226 --------ERRT-------------------------TIMLIAVVIVFLICNLPAGILNILEAIFG----ESFLSPIYQL 268
                        330       340       350
                 ....*....|....*....|....*....|.
gi 392928093 350 LLIVRNVLIVVSYPFRFAIYCGMSQQFRDVV 380
Cdd:cd14978  269 LGDISNLLVVLNSAVNFIIYCLFSSKFRRTF 299
7tm_1 pfam00001
7 transmembrane receptor (rhodopsin family); This family contains, amongst other ...
50-265 9.94e-10

7 transmembrane receptor (rhodopsin family); This family contains, amongst other G-protein-coupled receptors (GCPRs), members of the opsin family, which have been considered to be typical members of the rhodopsin superfamily. They share several motifs, mainly the seven transmembrane helices, GCPRs of the rhodopsin superfamily. All opsins bind a chromophore, such as 11-cis-retinal. The function of most opsins other than the photoisomerases is split into two steps: light absorption and G-protein activation. Photoisomerases, on the other hand, are not coupled to G-proteins - they are thought to generate and supply the chromophore that is used by visual opsins.


Pssm-ID: 459624 [Multi-domain]  Cd Length: 256  Bit Score: 59.23  E-value: 9.94e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392928093   50 IVVVLSHKYLRTPTNYVLLAMAVTELLTGLSCLPWFTYYYTLSGYKNdlqtgLPSFWCDMIpymaAFLPSIFHTMAIWLT 129
Cdd:pfam00001   6 ILVILRNKKLRTPTNIFLLNLAVADLLFSLLTLPFWLVYYLNHGDWP-----FGSALCKIV----GALFVVNGYASILLL 76
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392928093  130 VYLAIQRYIYICVPSLVRKFCTIHRSKQVIFFIISVATIMYTPDLMaFHNKShdvfdSKRNRTMKLCYRHrapFMLKLGD 209
Cdd:pfam00001  77 TAISIDRYLAIVHPLRYKRRRTPRRAKVLILVIWVLALLLSLPPLL-FGWTL-----TVPEGNVTVCFID---FPEDLSK 147
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 392928093  210 DIYYKVMFttqTVAVHLIPSVLLVIFTWKLVGAIrvadRRHANLLSKYSTTTRSTR 265
Cdd:pfam00001 148 PVSYTLLI---SVLGFLLPLLVILVCYTLIIRTL----RKSASKQKSSERTQRRRK 196
 
Name Accession Description Interval E-value
7tmA_FMRFamide_R-like cd14978
FMRFamide (Phe-Met-Arg-Phe) receptors and related proteins, member of the class A family of ...
30-380 2.50e-59

FMRFamide (Phe-Met-Arg-Phe) receptors and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes Drosophila melanogaster G-protein coupled FMRFamide (Phe-Met-Arg-Phe-NH2) receptor DrmFMRFa-R and related invertebrate receptors, as well as the vertebrate proteins GPR139 and GPR142. DrmFMRFa-R binds with high affinity to FMRFamide and intrinsic FMRFamide-related peptides. FMRFamide is a neuropeptide from the family of FMRFamide-related peptides (FaRPs), which all containing a C-terminal RFamide (Arg-Phe-NH2) motif and have diverse functions in the central and peripheral nervous systems. FMRFamide is an important neuropeptide in many types of invertebrates such as insects, nematodes, molluscs, and worms. In invertebrates, the FMRFamide-related peptides are involved in the regulation of heart rate, blood pressure, gut motility, feeding behavior, and reproduction. On the other hand, in vertebrates such as mice, they play a role in the modulation of morphine-induced antinociception. Orphan receptors GPR139 and GPR142 are very closely related G protein-coupled receptors, but they have different expression patterns in the brain and in other tissues. These receptors couple to inhibitory G proteins and activate phospholipase C. Studies suggested that dimer formation may be required for their proper function. GPR142 is predominantly expressed in pancreatic beta-cells and mediates enhancement of glucose-stimulated insulin secretion, whereas GPR139 is mostly expressed in the brain and is suggested to play a role in the control of locomotor activity. Tryptophan and phenylalanine have been identified as putative endogenous ligands of GPR139.


Pssm-ID: 410630 [Multi-domain]  Cd Length: 299  Bit Score: 198.24  E-value: 2.50e-59
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392928093  30 PMYGYMMPFIVTLTVATNSFIVVVLSHKYLRTPTNYVLLAMAVTELLTGLSCLPWFTYYYTLSGYKNDLqtglpSFWCDM 109
Cdd:cd14978    1 VLYGYVLPVICIFGIIGNILNLVVLTRKSMRSSTNVYLAALAVSDILVLLSALPLFLLPYIADYSSSFL-----SYFYAY 75
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392928093 110 IPYMAAFLPSIFHTMAIWLTVYLAIQRYIYICVPSLVRKFCTIHRSKQVIFFIISVATIMYTPdlMAFHNKSHDVFDSkr 189
Cdd:cd14978   76 FLPYIYPLANTFQTASVWLTVALTVERYIAVCHPLKARTWCTPRRARRVILIIIIFSLLLNLP--RFFEYEVVECENC-- 151
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392928093 190 nrtMKLCYRHRAPFMLKLGDDIYYKVMFTTQTVAVHLIPSVLLVIFTWKLVGAIRVADRRHANLLSKYSTTTRSTRRkfs 269
Cdd:cd14978  152 ---NNNSYYYVIPTLLRQNETYLLKYYFWLYAIFVVLLPFILLLILNILLIRALRKSKKRRRLLRRRRRLLSRSQRR--- 225
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392928093 270 eltnssenENKItrlfkqrdsvsvgneprrahglkqnTRMLVVVILLFLITEIPAALIFTIHVLSVslkfSFVDYQFLNI 349
Cdd:cd14978  226 --------ERRT-------------------------TIMLIAVVIVFLICNLPAGILNILEAIFG----ESFLSPIYQL 268
                        330       340       350
                 ....*....|....*....|....*....|.
gi 392928093 350 LLIVRNVLIVVSYPFRFAIYCGMSQQFRDVV 380
Cdd:cd14978  269 LGDISNLLVVLNSAVNFIIYCLFSSKFRRTF 299
7tm_classA_rhodopsin-like cd00637
rhodopsin receptor-like class A family of the seven-transmembrane G protein-coupled receptor ...
38-352 1.21e-19

rhodopsin receptor-like class A family of the seven-transmembrane G protein-coupled receptor superfamily; Class A rhodopsin-like receptors constitute about 90% of all GPCRs. The class A GPCRs include the light-sensitive rhodopsin as well as receptors for biogenic amines, lipids, nucleotides, odorants, peptide hormones, and a variety of other ligands. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes. Based on sequence similarity, GPCRs can be divided into six major classes: class A (rhodopsin-like family), class B (Methuselah-like, adhesion and secretin-like receptor family), class C (metabotropic glutamate receptor family), class D (fungal mating pheromone receptors), class E (cAMP receptor family), and class F (frizzled/smoothened receptor family). Nearly 800 human GPCR genes have been identified and are involved essentially in all major physiological processes. Approximately 40% of clinically marketed drugs mediate their effects through modulation of GPCR function for the treatment of a variety of human diseases including bacterial infections.


Pssm-ID: 410626 [Multi-domain]  Cd Length: 275  Bit Score: 88.88  E-value: 1.21e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392928093  38 FIVTLTVATNSF-IVVVLSHKYLRTPTNYVLLAMAVTELLTGLSCLPWFTYYYTLSGYkndlqtGLPSFWCDMIPYMAAF 116
Cdd:cd00637    7 LIFVVGLVGNLLvILVILRNRRLRTVTNYFILNLAVADLLVGLLVIPFSLVSLLLGRW------WFGDALCKLLGFLQSV 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392928093 117 LP--SIFHTMAIwltvylAIQRYIYICVPSLVRKFCTIHRSKQVIFFIISVATIMYTPDLMAFHnkshdVFDSKRNRTMK 194
Cdd:cd00637   81 SLlaSILTLTAI------SVDRYLAIVHPLRYRRRFTRRRAKLLIALIWLLSLLLALPPLLGWG-----VYDYGGYCCCC 149
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392928093 195 LCYRHRAPFMlklgddIYYKVMFTTQTVavhlIPSVLLVIFTWKLVGAIRVADRRHANLLSKYSTTTRSTRRKfseltns 274
Cdd:cd00637  150 LCWPDLTLSK------AYTIFLFVLLFL----LPLLVIIVCYVRIFRKLRRHRRRIRSSSSNSSRRRRRRRER------- 212
                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 392928093 275 senenKItrlfkqrdsvsvgneprrahglkqnTRMLVVVILLFLITEIPAALIFTIHVLSVSLKFSFVDYQFLNILLI 352
Cdd:cd00637  213 -----KV-------------------------TKTLLIVVVVFLLCWLPYFILLLLDVFGPDPSPLPRILYFLALLLA 260
7tmA_CCKR-like cd14993
cholecystokinin receptors and related proteins, member of the class A family of ...
39-377 1.66e-13

cholecystokinin receptors and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group represents four G-protein coupled receptors that are members of the RFamide receptor family, including cholecystokinin receptors (CCK-AR and CCK-BR), orexin receptors (OXR), neuropeptide FF receptors (NPFFR), and pyroglutamylated RFamide peptide receptor (QRFPR). These RFamide receptors are activated by their endogenous peptide ligands that share a common C-terminal arginine (R) and an amidated phenylanine (F) motif. CCK-AR (type A, alimentary; also known as CCK1R) is found abundantly on pancreatic acinar cells and binds only sulfated CCK-peptides with very high affinity, whereas CCK-BR (type B, brain; also known as CCK2R), the predominant form in the brain and stomach, binds CCK or gastrin and discriminates poorly between sulfated and non-sulfated peptides. CCK is implicated in regulation of digestion, appetite control, and body weight, and is involved in neurogenesis via CCK-AR. There is some evidence to support that CCK and gastrin, via their receptors, are involved in promoting cancer development and progression, acting as growth and invasion factors. Orexins (OXs; also referred to as hypocretins) are neuropeptide hormones that regulate the sleep-wake cycle and potently influence homeostatic systems regulating appetite and feeding behavior or modulating emotional responses such as anxiety or panic. OXs are synthesized as prepro-orexin (PPO) in the hypothalamus and then proteolytically cleaved into two forms of isoforms: orexin-A (OX-A) and orexin-B (OX-B). OXA is a 33 amino-acid peptide with N-terminal pyroglutamyl residue and two intramolecular disulfide bonds, whereas OXB is a 28 amino-acid linear peptide with no disulfide bonds. OX-A binds orexin receptor 1 (OX1R) with high-affinity, but also binds with somewhat low-affinity to OX2R, and signals primarily to Gq coupling, whereas OX-B shows a strong preference for the orexin receptor 2 (OX2R) and signals through Gq or Gi/o coupling. The 26RFa, also known as QRFP (Pyroglutamylated RFamide peptide), is a 26-amino acid residue peptide that exerts similar orexigenic activity including the regulation of feeding behavior in mammals. It is the ligand for G-protein coupled receptor 103 (GPR103), which is predominantly expressed in paraventricular (PVN) and ventromedial (VMH) nuclei of the hypothalamus. GPR103 shares significant protein sequence homology with orexin receptors (OX1R and OX2R), which have recently shown to produce a neuroprotective effect in Alzheimer's disease by forming a functional heterodimer with GPR103. Neuropeptide FF (NPFF) is a mammalian octapeptide that has been implicated in a wide range of physiological functions in the brain including pain sensitivity, insulin release, food intake, memory, blood pressure, and opioid-induced tolerance and hyperalgesia. The effects of NPFF are mediated through neuropeptide FF1 and FF2 receptors (NPFF1-R and NPFF2-R) which are predominantly expressed in the brain. NPFF induces pro-nociceptive effects, mainly through the NPFF1-R, and anti-nociceptive effects, mainly through the NPFF2-R.


Pssm-ID: 320124 [Multi-domain]  Cd Length: 296  Bit Score: 71.09  E-value: 1.66e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392928093  39 IVTLTVATNSF-IVVVLSHKYLRTPTNYVLLAMAVTELLTGLSCLPwftyyYTLSGYKNDLQTgLPSFWCDMIPYM--AA 115
Cdd:cd14993   10 VFLLALVGNSLvIAVVLRNKHMRTVTNYFLVNLAVADLLVSLFCMP-----LTLLENVYRPWV-FGEVLCKAVPYLqgVS 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392928093 116 FLPSIFHTMAIwltvylAIQRYIYICVPSLVRKFCTIHRSKQVIFFIISVATIMYTPDLMAFHNKSHDvFDSKRNRTMKL 195
Cdd:cd14993   84 VSASVLTLVAI------SIDRYLAICYPLKARRVSTKRRARIIIVAIWVIAIIIMLPLLVVYELEEII-SSEPGTITIYI 156
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392928093 196 CYRHRAPFMLKLgddiYYkvmFTTQTVAVHLIPSVLLVIFtwklvgairvadrrhanllskYSTTTRSTRRKFSELTNSS 275
Cdd:cd14993  157 CTEDWPSPELRK----AY---NVALFVVLYVLPLLIISVA---------------------YSLIGRRLWRRKPPGDRGS 208
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392928093 276 ENENKITRLFKQRdsvsvgnepRRAhglkqnTRMLVVVILLFLITEIPaaliftIHVLSVSLKF--SFVDYQFLNILLIV 353
Cdd:cd14993  209 ANSTSSRRILRSK---------KKV------ARMLIVVVVLFALSWLP------YYVLSILLDFgpLSSEESDENFLLIL 267
                        330       340       350
                 ....*....|....*....|....*....|.
gi 392928093 354 RNVLIvvsypFRFA-------IYCGMSQQFR 377
Cdd:cd14993  268 PFAQL-----LGYSnsainpiIYCFMSKKFR 293
7tmA_Opsins_type2_animals cd14969
type 2 opsins in animals, member of the class A family of seven-transmembrane G ...
31-162 6.40e-11

type 2 opsins in animals, member of the class A family of seven-transmembrane G protein-coupled receptors; This rhodopsin family represents the type 2 opsins found in vertebrates and invertebrates except sponge. Type 2 opsins primarily function as G protein coupled receptors and are responsible for vision as well as for circadian rhythm and pigment regulation. On the contrary, type 1 opsins such as bacteriorhodopsin and proteorhodopsin are found in both prokaryotic and eukaryotic microbes, functioning as light-gated ion channels, proton pumps, sensory receptors and in other unknown functions. Although these two opsin types share seven-transmembrane domain topology and a conserved lysine reside in the seventh helix, type 1 opsins do not activate G-proteins and are not evolutionarily related to type 2. Type 2 opsins can be classified into six distinct subfamilies including the vertebrate opsins/encephalopsins, the G(o) opsins, the G(s) opsins, the invertebrate G(q) opsins, the photoisomerases, and the neuropsins.


Pssm-ID: 381741 [Multi-domain]  Cd Length: 284  Bit Score: 63.38  E-value: 6.40e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392928093  31 MYGYMMPFIVTLTVATNSF-IVVVLSHKYLRTPTNYVLLAMAVTELLTGLSCLPWfTYYYTLSGYkndlqtglpSFWCDM 109
Cdd:cd14969    2 VLAVYLSLIGVLGVVLNGLvIIVFLKKKKLRTPLNLFLLNLALADLLMSVVGYPL-SFYSNLSGR---------WSFGDP 71
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|...
gi 392928093 110 IPYMAAFLPSIFHTMAIWLTVYLAIQRYIYICVPSLVRKFcTIHRSKQVIFFI 162
Cdd:cd14969   72 GCVIYGFAVTFLGLVSISTLAALAFERYLVIVRPLKAFRL-SKRRALILIAFI 123
7tmA_GPRnna14-like cd15001
GPRnna14 and related proteins, member of the class A family of seven-transmembrane G ...
50-378 8.08e-11

GPRnna14 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes the orphan G-protein coupled receptor GPRnna14 found in body louse (Pediculus humanus humanus) as well as its closely related proteins of unknown function. These receptors are members of the class A rhodopsin-like G-protein coupled receptors. As an obligatory parasite of humans, the body louse is an important vector for human diseases, including epidemic typhus, relapsing fever, and trench fever. GPRnna14 shares significant sequence similarity with the members of the neurotensin receptor family. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320132 [Multi-domain]  Cd Length: 266  Bit Score: 62.68  E-value: 8.08e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392928093  50 IVVVLSHKYLRTPTNYVLLAMAVTELLTGLSCLPWFTYYYTLSGYKndlqtgLPSFWCDMIPYM--AAFLPSIFHTMAIw 127
Cdd:cd15001   21 IFVVARFRRMRSVTNVFLASLATADLLLLVFCVPLKTAEYFSPTWS------LGAFLCKAVAYLqlLSFICSVLTLTAI- 93
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392928093 128 ltvylAIQRYIYICVPSLVRKFCTIHRSKQVIFFIISVATIMYTPDLMAfhnKSHDVFDSKRNRTMKLCyRHRAPFMLKL 207
Cdd:cd15001   94 -----SIERYYVILHPMKAKSFCTIGRARKVALLIWILSAILASPVLFG---QGLVRYESENGVTVYHC-QKAWPSTLYS 164
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392928093 208 gddIYYKVmftTQTVAVHLIPSVLLVIftwklvgairvadrrhanllskysTTTRSTRrkfseltnssenenkitrlfkq 287
Cdd:cd15001  165 ---RLYVV---YLAIVIFFIPLIVMTF------------------------AYARDTR---------------------- 192
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392928093 288 rdsvsvgneprrahglKQNTRMLVVVILLFLITEIPaalIFTIHVLSvslKFSFVDYQFLNILLIVRNVLIVVSY----- 362
Cdd:cd15001  193 ----------------KQVIKMLISVVVLFAVCWGP---LLIDNLLV---SFDVISTLHTQALKYMRIAFHLLSYansci 250
                        330
                 ....*....|....*..
gi 392928093 363 -PFrfaIYCGMSQQFRD 378
Cdd:cd15001  251 nPI---IYAFMSKNFRS 264
7tmA_amine_R-like cd14967
amine receptors and similar proteins, member of the class A family of seven-transmembrane G ...
38-238 8.68e-11

amine receptors and similar proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; Amine receptors of the class A family of GPCRs include adrenoceptors, 5-HT (serotonin) receptors, muscarinic cholinergic receptors, dopamine receptors, histamine receptors, and trace amine receptors. The receptors of amine subfamily are major therapeutic targets for the treatment of neurological disorders and psychiatric diseases. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320098 [Multi-domain]  Cd Length: 259  Bit Score: 62.58  E-value: 8.68e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392928093  38 FIVTLTVATNSF-IVVVLSHKYLRTPTNYVLLAMAVTELLTGLSCLPWFTyYYTLSGYKNdlqtgLPSFWCDMIPYMAAF 116
Cdd:cd14967    8 LIILVTVFGNLLvILAVYRNRRLRTVTNYFIVSLAVADLLVALLVMPFSA-VYTLLGYWP-----FGPVLCRFWIALDVL 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392928093 117 LP--SIFHTMAIwltvylAIQRYIYICVPSLVRKFCTIHRSKQVIFFIISVATIMYTPDLMAFHNKSHDVFDskrnrtmk 194
Cdd:cd14967   82 CCtaSILNLCAI------SLDRYLAITRPLRYRQLMTKKRALIMIAAVWVYSLLISLPPLVGWRDETQPSVV-------- 147
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....
gi 392928093 195 lcyrhraPFMLKLGDDIYYKVMfttQTVAVHLIPSVLLVIFTWK 238
Cdd:cd14967  148 -------DCECEFTPNKIYVLV---SSVISFFIPLLIMIVLYAR 181
7tm_1 pfam00001
7 transmembrane receptor (rhodopsin family); This family contains, amongst other ...
50-265 9.94e-10

7 transmembrane receptor (rhodopsin family); This family contains, amongst other G-protein-coupled receptors (GCPRs), members of the opsin family, which have been considered to be typical members of the rhodopsin superfamily. They share several motifs, mainly the seven transmembrane helices, GCPRs of the rhodopsin superfamily. All opsins bind a chromophore, such as 11-cis-retinal. The function of most opsins other than the photoisomerases is split into two steps: light absorption and G-protein activation. Photoisomerases, on the other hand, are not coupled to G-proteins - they are thought to generate and supply the chromophore that is used by visual opsins.


Pssm-ID: 459624 [Multi-domain]  Cd Length: 256  Bit Score: 59.23  E-value: 9.94e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392928093   50 IVVVLSHKYLRTPTNYVLLAMAVTELLTGLSCLPWFTYYYTLSGYKNdlqtgLPSFWCDMIpymaAFLPSIFHTMAIWLT 129
Cdd:pfam00001   6 ILVILRNKKLRTPTNIFLLNLAVADLLFSLLTLPFWLVYYLNHGDWP-----FGSALCKIV----GALFVVNGYASILLL 76
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392928093  130 VYLAIQRYIYICVPSLVRKFCTIHRSKQVIFFIISVATIMYTPDLMaFHNKShdvfdSKRNRTMKLCYRHrapFMLKLGD 209
Cdd:pfam00001  77 TAISIDRYLAIVHPLRYKRRRTPRRAKVLILVIWVLALLLSLPPLL-FGWTL-----TVPEGNVTVCFID---FPEDLSK 147
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 392928093  210 DIYYKVMFttqTVAVHLIPSVLLVIFTWKLVGAIrvadRRHANLLSKYSTTTRSTR 265
Cdd:pfam00001 148 PVSYTLLI---SVLGFLLPLLVILVCYTLIIRTL----RKSASKQKSSERTQRRRK 196
7tmA_D2-like_dopamine_R cd15053
D2-like dopamine receptors, member of the class A family of seven-transmembrane G ...
32-244 1.78e-08

D2-like dopamine receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Dopamine receptors are members of the class A G protein-coupled receptors that are involved in many neurological processes in the central nervous system (CNS). The neurotransmitter dopamine is the primary endogenous agonist for dopamine receptors. Dopamine receptors consist of at least five subtypes: D1, D2, D3, D4, and D5. The D1 and D5 subtypes are members of the D1-like family of dopamine receptors, whereas the D2, D3 and D4 subtypes are members of the D2-like family. The D1-like family receptors are coupled to G proteins of the G(s) family, which activate adenylate cyclase, causing cAMP formation and activation of protein kinase A. In contrast, activation of D2-like family receptors is linked to G proteins of the G(i) family, which inhibit adenylate cyclase. Dopamine receptors are major therapeutic targets for neurological and psychiatric disorders such as drug abuse, depression, schizophrenia, or Parkinson's disease.


Pssm-ID: 320181 [Multi-domain]  Cd Length: 263  Bit Score: 55.43  E-value: 1.78e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392928093  32 YGYMMPFIVTLTVATNSFIVV-VLSHKYLRTPTNYVLLAMAVTELLTGLSCLPWFTYYYTlsgykNDLQTGLPSFWCDMi 110
Cdd:cd15053    3 WALFLLLLPLLTVFGNVLVIMsVFRERSLQTATNYFIVSLAVADLLVAILVMPFAVYVEV-----NGGKWYLGPILCDI- 76
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392928093 111 pYMAafLPSIFHTMAIWLTVYLAIQRYIYICVPSLVRKFCTIHRSKQVIFFIISVATIMYTPDLMAFHNkshdvfdsKRN 190
Cdd:cd15053   77 -YIA--MDVMCSTASIFNLCAISIDRYIAVTQPIKYARQKNSKRVLLTIAIVWVVSAAIACPLLFGLNN--------VPY 145
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....
gi 392928093 191 RTMKLCYRHRAPFMLklgddiyYKVMFTtqtvavHLIPSVLLVIFTWKLVGAIR 244
Cdd:cd15053  146 RDPEECRFYNPDFII-------YSSISS------FYIPCIVMLLLYYRIFRALR 186
7tmA_TACR_family cd14992
tachykinin receptor and closely related proteins, member of the class A family of ...
38-234 2.43e-08

tachykinin receptor and closely related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This subfamily includes G-protein coupled receptors for a variety of neuropeptides of the tachykinin (TK) family as well as closely related receptors. The tachykinins are widely distributed throughout the mammalian central and peripheral nervous systems and act as excitatory transmitters on neurons and cells in the gastrointestinal tract. The TKs are characterized by a common five-amino acid C-terminal sequence, Phe-X-Gly-Leu-Met-NH2, where X is a hydrophobic residue. The three major mammalian tachykinins are substance P (SP), neurokinin A (NKA), and neurokinin B (NKB). The physiological actions of tachykinins are mediated through three types of receptors: neurokinin receptor type 1 (NK1R), NK2R, and NK3R. SP is a high-affinity endogenous ligand for NK1R, which interacts with the Gq protein and activates phospholipase C, leading to elevation of intracellular calcium. NK2R is a high-affinity receptor for NKA, the tachykinin neuropeptide substance K. SP and NKA are found in the enteric nervous system and mediate in the regulation of gastrointestinal motility, secretion, vascular permeability, and pain perception. NK3R is activated by its high-affinity ligand, NKB, which is primarily involved in the central nervous system and plays a critical role in the regulation of gonadotropin hormone release and the onset of puberty.


Pssm-ID: 320123 [Multi-domain]  Cd Length: 291  Bit Score: 55.52  E-value: 2.43e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392928093  38 FIVTLTVATNSFIVVVLSHKYLRTPTNYVLLAMAVTELLTGLSCLPW-FTYYYTLSGYkndlqtgLPSFWCDMIPYM--A 114
Cdd:cd14992   10 IILVSVVGNFIVIAALARHKNLRGATNYFIASLAISDLLMALFCTPFnFTYVVSLSWE-------YGHFLCKIVNYLrtV 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392928093 115 AFLPSIFHTMAIwltvylAIQRYIYICVPSLVRKFCTIHRSKQVIFFIISVATIMYTPDLMAFhnKSHDVFDSKRNRTMK 194
Cdd:cd14992   83 SVYASSLTLTAI------AFDRYFAIIHPLKPRHRQSYTTTVIIIITIWVVSLLLAIPQLYYA--TTEVLFSVKNQEKIF 154
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|
gi 392928093 195 LCYrhrapfMLKLGDDIYYKVMFTTQTVAVHLIPsvLLVI 234
Cdd:cd14992  155 CCQ------IPPVDNKTYEKVYFLLIFVVIFVLP--LIVM 186
7tmA_NTSR-like cd14979
neurotensin receptors and related G protein-coupled receptors, member of the class A family of ...
50-380 3.21e-08

neurotensin receptors and related G protein-coupled receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; This subfamily includes the neurotensin receptors and related G-protein coupled receptors, including neuromedin U receptors, growth hormone secretagogue receptor, motilin receptor, the putative GPR39 and the capa receptors from insects. These receptors all bind peptide hormones with diverse physiological effects. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320110 [Multi-domain]  Cd Length: 300  Bit Score: 55.05  E-value: 3.21e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392928093  50 IVVVLSHKYLRTPTNYVLLAMAVTELLTGLSCLPwfTYYYTLSGYKNDLqtgLPSFWCdmipYMAAFLPSIFHTMAIWLT 129
Cdd:cd14979   22 CIVIARHKSLRTTTNYYLFSLAVSDLLILLVGLP--VELYNFWWQYPWA---FGDGGC----KLYYFLFEACTYATVLTI 92
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392928093 130 VYLAIQRYIYICVPSLVRKFCTIHRSKQVIFFIISVATIMYTPDLMAFHNKSHDVFDSKRNRTMKLCyrhrapfMLKLgD 209
Cdd:cd14979   93 VALSVERYVAICHPLKAKTLVTKRRVKRFILAIWLVSILCAIPILFLMGIQYLNGPLPGPVPDSAVC-------TLVV-D 164
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392928093 210 DIYYKVMFTTQTVAVHLIPSVLLVIFtwklvgAIRVADRRHANLLSKYSTTTRSTRRkfseltnssenenkitrlfkqrd 289
Cdd:cd14979  165 RSTFKYVFQVSTFIFFVLPMFVISIL------YFRIGVKLRSMRNIKKGTRAQGTRN----------------------- 215
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392928093 290 svsvGNEPRRAHGLKQNTRMLVVVILLFLITEIPaaliFTIHVLSVSLKFSFVD--YQFLNILLIVRNVLIVVSYPFRFA 367
Cdd:cd14979  216 ----VELSLSQQARRQVVKMLGAVVIAFFVCWLP----FHAQRLMFSYASKEDTflFDFYQYLYPISGILFYLSSAINPI 287
                        330
                 ....*....|...
gi 392928093 368 IYCGMSQQFRDVV 380
Cdd:cd14979  288 LYNLMSSRFRVAF 300
7tmA_CCK_R cd15206
cholecystokinin receptors, member of the class A family of seven-transmembrane G ...
27-242 4.57e-08

cholecystokinin receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Cholecystokinin receptors (CCK-AR and CCK-BR) are a group of G-protein coupled receptors which bind the peptide hormones cholecystokinin (CCK) or gastrin. CCK, which facilitates digestion in the small intestine, and gastrin, a major regulator of gastric acid secretion, are highly similar peptides. Like gastrin, CCK is a naturally-occurring linear peptide that is synthesized as a preprohormone, then proteolytically cleaved to form a family of peptides with the common C-terminal sequence (Gly-Trp-Met-Asp-Phe-NH2), which is required for full biological activity. CCK-AR (type A, alimentary; also known as CCK1R) is found abundantly on pancreatic acinar cells and binds only sulfated CCK-peptides with very high affinity, whereas CCK-BR (type B, brain; also known as CCK2R), the predominant form in the brain and stomach, binds CCK or gastrin and discriminates poorly between sulfated and non-sulfated peptides. CCK is implicated in regulation of digestion, appetite control, and body weight, and is involved in neurogenesis via CCK-AR. There is some evidence to support that CCK and gastrin, via their receptors, are involved in promoting cancer development and progression, acting as growth and invasion factors.


Pssm-ID: 320334 [Multi-domain]  Cd Length: 269  Bit Score: 54.32  E-value: 4.57e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392928093  27 WAVPMYgyMMPFIvtLTVATNSFIVVVL-SHKYLRTPTNYVLLAMAVTELLTGLSCLPwFTYYYTLsgYKNDLqtgLPSF 105
Cdd:cd15206    2 LIIPLY--SVIFL--LAVVGNILVIVTLvQNKRMRTVTNVFLLNLAVSDLLLAVFCMP-FTLVGQL--LRNFI---FGEV 71
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392928093 106 WCDMIPYMAAFLPSIfhtmAIWLTVYLAIQRYIYICVPSLVRKFCTIHRSKQVIFFIISVATIMYTPDLmafhnkshdVF 185
Cdd:cd15206   72 MCKLIPYFQAVSVSV----STFTLVAISLERYFAICHPLKSRVWQTLSHAYKVIAGIWLLSFLIMSPIL---------VF 138
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 392928093 186 DSKRNRTMKLCYRHRAPFMLKLGDDIYYKVMFTTQTVAVHLIPSVLLVIFTWKLVGA 242
Cdd:cd15206  139 SNLIPMSRPGGHKCREVWPNEIAEQAWYVFLDLMLLVIPGLVMSVAYGLISWTLLEA 195
7TM_GPCR_Srw pfam10324
Serpentine type 7TM GPCR chemoreceptor Srw; Chemoreception is mediated in Caenorhabditis ...
37-387 6.32e-08

Serpentine type 7TM GPCR chemoreceptor Srw; Chemoreception is mediated in Caenorhabditis elegans by members of the seven-transmembrane G-protein-coupled receptor class (7TM GPCRs) of proteins which are of the serpentine type. Srw is a solo family amongst the superfamilies of chemoreceptors. Chemoperception is one of the central senses of soil nematodes like C. elegans which are otherwise 'blind' and 'deaf'. The genes encoding Srw do not appear to be under as strong an adaptive evolutionary pressure as those of Srz.


Pssm-ID: 402097  Cd Length: 318  Bit Score: 54.52  E-value: 6.32e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392928093   37 PFIVTLTVATNSFIVVVLSHKYLRTPTNYVLL-AMAVTELLTGLSCLPWFTYYYTLSgYKNDLQTGLPSFWCDMIPYMAA 115
Cdd:pfam10324   4 FILSFIGFIINIFHLIILTRKSMRTSSINIIMiGIAICDIITMLLTIYNFIPEFIIS-YENSECIPPDSYLKVLLDWILE 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392928093  116 FLPSIFHTMAIWLTVYLAIQRYIYICVPsLVRKFCTIHRSKQVIFFIISVATImYTPdLMAFHNKSHDVFDSKRNRTMKL 195
Cdd:pfam10324  83 SLQDYSRRCSTWLGVFMALIRTLVVKNP-MSNKIQKLSKPKFGLIIIIIVFIL-SLP-ISIFYYFRYEIVEVGGIWKPPP 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392928093  196 -CYRHRAPF-----------MLKLGDDIYYKVMFTTQTVAVHLIPSVLLVIFTWKLVGAIRVADRRHANLLSKYSTTTRS 263
Cdd:pfam10324 160 nCAGFPPNYtetryvlvvseLFTANDGLLLKIFLLIDGIFSKIIPCILLPILTILLIIELRKAKKSRKNLSSSSKNKSDR 239
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392928093  264 TrrkfseltnssenenkitrlfkqrdsvsvgneprrahglkqnTRMLVVVILLFLITEIPAALIFTI-HVLSVSLKFSFV 342
Cdd:pfam10324 240 T------------------------------------------TKLVIFMTISFFIAEFPLGISYIIqFFFTDNPGIRRI 277
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....*
gi 392928093  343 DYQFLNILlivrNVLIVVSYPFRFAIYCGMSQQFRDVVRQMFTGK 387
Cdd:pfam10324 278 LTYLSVIF----SLLFTINSISHCFICFLMSSQYRKTAKKLFGCK 318
7tmA_OXR cd15208
orexin receptors, member of the class A family of seven-transmembrane G protein-coupled ...
33-377 2.42e-07

orexin receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Orexins (OXs, also referred to as hypocretins) are neuropeptide hormones that regulate the sleep-wake cycle and potently influence homeostatic systems regulating appetite and feeding behavior or modulating emotional responses such as anxiety or panic. OXs are synthesized as prepro-orexin (PPO) in the hypothalamus and then proteolytically cleaved into two forms of isoforms: orexin-A (OX-A) and orexin-B (OX-B). OXA is a 33 amino-acid peptide with N-terminal pyroglutamyl residue and two intramolecular disulfide bonds, whereas OXB is a 28 amino-acid linear peptide with no disulfide bonds. OX-A binds orexin receptor 1 (OX1R) with high-affinity, but also binds with somewhat low-affinity to OX2R, and signals primarily to Gq coupling, whereas OX-B shows a strong preference for the orexin receptor 2 (OX2R) and signals through Gq or Gi/o coupling. Thus, activation of OX1R or OX2R will activate phospholipase activity and the phosphatidylinositol and calcium signaling pathways. Additionally, OX2R activation can also lead to inhibition of adenylate cyclase.


Pssm-ID: 320336 [Multi-domain]  Cd Length: 303  Bit Score: 52.39  E-value: 2.42e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392928093  33 GYMMPFIVTLtVATNSFIVVVLSHKYLRTPTNYVLLAMAVTELLTGLSCLP----------WFtyyytlsgykndLQTGL 102
Cdd:cd15208    6 LYILVFIVGL-VGNVLVCFAVWRNHHMRTVTNYFIVNLSLADFLVIIICLPatllvdvtetWF------------FGQVL 72
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392928093 103 psfwCDMIPYMAA--FLPSIFHTMAIwltvylAIQRYIYICVPslVRKFCTIHRSKQVIFFIISVATIMYTPDLMAFhNK 180
Cdd:cd15208   73 ----CKIIPYLQTvsVSVSVLTLSCI------ALDRWYAICHP--LMFKSTAKRARVSILIIWIVSLLIMIPQAIVM-EC 139
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392928093 181 SHDVFDSKRNRTMKLCYRHrapfmlkLGDDIYYKVMFTTQTVAVHLIPSVLLVIftwklvgairvadrrhanllsKYSTT 260
Cdd:cd15208  140 SRVVPLANKTILLTVCDER-------WSDSIYQKVYHICFFLVTYLLPLCLMIL---------------------AYFQI 191
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392928093 261 TRSTRRKFSELTNSSENenkitRLFKQRDSVSVGNEPRRAHGLKQNTRMLVVVILLFLITEIPaaliftIHVLSVsLKFS 340
Cdd:cd15208  192 FRKLWCRQIPGTSSVVQ-----RKWNKPRKSAVAAEEKQLRSRRKTAKMLIVVVIMFAICYLP------VHLLNI-LRYV 259
                        330       340       350       360
                 ....*....|....*....|....*....|....*....|.
gi 392928093 341 F----VDYQFLNILLIVRNVLIVVSYPFRFAIYCGMSQQFR 377
Cdd:cd15208  260 FglftVDRETIYAWFLFSHWLVYANSAINPIIYNFMSGKFR 300
7tmA_MWS_opsin cd15080
medium wave-sensitive opsins, member of the class A family of seven-transmembrane G ...
34-160 1.00e-06

medium wave-sensitive opsins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes Medium Wave-Sensitive opsin, which mediates visual transduction in response to light at medium wavelengths (green). Vertebrate cone opsins are expressed in cone photoreceptor cells of the retina and involved in mediating photopic vision, which allows color perception. The cone opsins can be classified into four classes according to their peak absorption wavelengths: SWS1 (ultraviolet sensitive), SWS2 (short wave-sensitive), MWS/LWS (medium/long wave-sensitive), and RH2 (medium wave-sensitive, rhodopsin-like opsins). Members of this group belong to the class A of the G protein-coupled receptors and possess seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops.


Pssm-ID: 381742 [Multi-domain]  Cd Length: 280  Bit Score: 50.60  E-value: 1.00e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392928093  34 YMMPFIVTLTVATNSFIVVVLSHKYLRTPTNYVLLAMAVTELLTGLSCLPwFTYYYTLSGYKNDLQTGLpsfwcdmipYM 113
Cdd:cd15080    6 YMFLLILLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFT-TTMYTSMHGYFVFGPTGC---------NL 75
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*..
gi 392928093 114 AAFLPSIFHTMAIWLTVYLAIQRYIYICVPSLVRKFCTIHRSKQVIF 160
Cdd:cd15080   76 EGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAF 122
7tmA_TAAR5 cd15318
trace amine-associated receptor 5, member of the class A family of seven-transmembrane G ...
42-145 1.85e-06

trace amine-associated receptor 5, member of the class A family of seven-transmembrane G protein-coupled receptors; The trace amine-associated receptor 5 is one of the 15 identified amine-activated G protein-coupled receptors (TAARs), a distinct subfamily within the class A G protein-coupled receptors. Trace amines are endogenous amines of unknown function that have strong structural and metabolic similarity to classical monoamine neurotransmitters (serotonin, noradrenaline, adrenaline, dopamine, and histamine), which play critical roles in human and animal physiological activities such as cognition, consciousness, mood, motivation, perception, and autonomic responses. However, trace amines are found in the mammalian brain at very low concentrations compared to classical monoamines. Trace amines, including p-tyramine, beta-phenylethylamine, and tryptamine, are also thought to act as chemical messengers to exert their biological effects in vertebrates. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320441 [Multi-domain]  Cd Length: 282  Bit Score: 49.47  E-value: 1.85e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392928093  42 LTVATNSFIVVVLSH-KYLRTPTNYVLLAMAVTELLTGLSCLPWFTYYYTLSGYkndlqtglpsFWCDMIPYMAAFLPSI 120
Cdd:cd15318   13 IIVLGNLFVVVTVSHfKALHTPTNFLLLSLALADMLLGLTVLPFSTIRSVESCW----------YFGDSFCRLHTCLDTL 82
                         90       100
                 ....*....|....*....|....*
gi 392928093 121 FHTMAIWLTVYLAIQRYIYICVPSL 145
Cdd:cd15318   83 FCLTSIFHLCFISIDRHCAICDPLL 107
7tmA_ETH-R cd14997
ecdysis-triggering hormone receptors, member of the class A family of seven-transmembrane G ...
50-166 3.63e-06

ecdysis-triggering hormone receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; This subgroup represents the ecdysis-triggering hormone receptors found in insects, which are members of the class A family of seven-transmembrane G-protein coupled receptors. Ecdysis-triggering hormones are vital regulatory signals that govern the stereotypic physiological sequence leading to cuticle shedding in insects. Thus, the ETH signaling system has been a target for the design of more sophisticated insect-selective pest control strategies. Two subtypes of ecdysis-triggering hormone receptor were identified in Drosophila melanogaster. Blood-borne ecdysis-triggering hormone (ETH) activates the behavioral sequence through direct actions on the central nervous system. In insects, ecdysis is thought to be controlled by the interaction between peptide hormones; in particular between ecdysis-triggering hormone (ETH) from the periphery and eclosion hormone (EH) and crustacean cardioactive peptide (CCAP) from the central nervous system. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320128 [Multi-domain]  Cd Length: 294  Bit Score: 48.83  E-value: 3.63e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392928093  50 IVVVLSHKYLRTPTNYVLLAMAVTELLTGLSCLP------WFTYYYTLSgykndlqtglpSFWCDMIPYMAA--FLPSIF 121
Cdd:cd14997   22 GIVVWKNKDMRTPTNIFLVNLSVADLLVLLVCMPvalvetWAREPWLLG-----------EFMCKLVPFVELtvAHASVL 90
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*
gi 392928093 122 HTMAIwltvylAIQRYIYICVPSLVRKFCTIHRskqvIFFIISVA 166
Cdd:cd14997   91 TILAI------SFERYYAICHPLQAKYVCTKRR----ALVIIALI 125
7tmA_TAARs cd15055
trace amine-associated receptors, member of the class A family of seven-transmembrane G ...
38-168 3.69e-06

trace amine-associated receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; The trace amine-associated receptors (TAARs) are a distinct subfamily within the class A G protein-coupled receptor family. Trace amines are endogenous amines of unknown function that have strong structural and metabolic similarity to classical monoamine neurotransmitters (serotonin, noradrenaline, adrenaline, dopamine, and histamine), which play critical roles in human and animal physiological activities such as cognition, consciousness, mood, motivation, perception, and autonomic responses. However, trace amines are found in the mammalian brain at very low concentrations compared to classical monoamines. Trace amines, including p-tyramine, beta-phenylethylamine, and tryptamine, are also thought to act as chemical messengers to exert their biological effects in vertebrates. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320183 [Multi-domain]  Cd Length: 285  Bit Score: 48.70  E-value: 3.69e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392928093  38 FIVTLTVATNSFIVVVLSH-KYLRTPTNYVLLAMAVTELLTGLSCLP----------WFtyyytlsgykndlqtgLPSFW 106
Cdd:cd15055    9 SISLLTVLGNLLVIISISHfKQLHTPTNLLLLSLAVADFLVGLLVMPfsmirsietcWY----------------FGDTF 72
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 392928093 107 CDMIPYMAAFLP--SIFHTMAIwltvylAIQRYIYICVPSLVRKFCTIHRSKQVIFFIISVATI 168
Cdd:cd15055   73 CKLHSSLDYILTsaSIFNLVLI------AIDRYVAVCDPLLYPTKITIRRVKICICLCWFVSAL 130
7tmA_mAChR cd15049
muscarinic acetylcholine receptor subfamily, member of the class A family of ...
38-255 5.13e-06

muscarinic acetylcholine receptor subfamily, member of the class A family of seven-transmembrane G protein-coupled receptors; Muscarinic acetylcholine receptors (mAChRs) regulate the activity of many fundamental central and peripheral functions. The mAChR family consists of 5 subtypes M1-M5, which can be further divided into two major groups according to their G-protein coupling preference. The M1, M3 and M5 receptors selectively interact with G proteins of the G(q/11) family, whereas the M2 and M4 receptors preferentially link to the G(i/o) types of G proteins. Activation of mAChRs by agonist (acetylcholine) leads to a variety of biochemical and electrophysiological responses. In general, the exact nature of these responses and the subsequent physiological effects mainly depend on the molecular and pharmacological identity of the activated receptor subtype(s). All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 341322 [Multi-domain]  Cd Length: 262  Bit Score: 48.08  E-value: 5.13e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392928093  38 FIVTLTVATNsfIVVVLS---HKYLRTPTNYVLLAMAVTELLTGLSCLPWFTyYYTLSGYKNdlqtgLPSFWCDM---IP 111
Cdd:cd15049    9 SLSLVTVGGN--ILVILSfrvNRQLRTVNNYFLLSLACADLIIGLVSMNLYT-VYLVMGYWP-----LGPLLCDLwlaLD 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392928093 112 YMAAfLPSIFHTMAIWLTVYLAIQRyiyicvPSLVRKFCTIHRSKQVIFFIISVATIMYTPDLMAFHnkshdVFDSKRNR 191
Cdd:cd15049   81 YVAS-NASVMNLLLISFDRYFSVTR------PLTYRAKRTPKRAILMIALAWVISFVLWAPAILGWQ-----YFVGERTV 148
                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 392928093 192 TMKLCYrhrAPFMlklgDDIYykVMFTTqTVAVHLIPSVLLVIFTWKLVGAIrVADRRHANLLS 255
Cdd:cd15049  149 PDGQCY---IQFL----DDPA--ITFGT-AIAAFYLPVLVMTILYWRIYRET-ARERKAARTLS 201
7tmA_leucokinin-like cd15393
leucokinin-like peptide receptor from tick and related proteins, member of the class A family ...
39-196 6.76e-06

leucokinin-like peptide receptor from tick and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This subgroup includes a leucokinin-like peptide receptor from the Southern cattle tick, Boophilus microplus, a pest of cattle world-wide. Leucokinins are invertebrate neuropeptides that exhibit myotropic and diuretic activity. This receptor is the first neuropeptide receptor known from the Acari and the second known in the subfamily of leucokinin-like peptide G-protein-coupled receptors. The other known leucokinin-like peptide receptor is a lymnokinin receptor from the mollusc Lymnaea stagnalis.


Pssm-ID: 320515 [Multi-domain]  Cd Length: 288  Bit Score: 47.79  E-value: 6.76e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392928093  39 IVTLTVATNSF-IVVVLSHKYLRTPTNYVLLAMAVTELLTGLSCLPwFTYYYTLSGYKNdlqtgLPSFWCDMIPYM--AA 115
Cdd:cd15393   10 ISLVAVVGNFLvIWVVAKNRRMRTVTNIFIANLAVADIIIGLFSIP-FQFQAALLQRWV-----LPRFMCPFCPFVqvLS 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392928093 116 FLPSIFHTMAIwltvylAIQRYIYICVPslVRKFCTIHRSKQVIFFIISVATIMYTPDLMAFHNKSHDvfDSKRNRTMKL 195
Cdd:cd15393   84 VNVSVFTLTVI------AVDRYRAVIHP--LKARCSKKSAKIIILIIWILALLVALPVALALRVEELT--DKTNNGVKPF 153

                 .
gi 392928093 196 C 196
Cdd:cd15393  154 C 154
7tmA_5-HT1_5_7 cd15064
serotonin receptor subtypes 1, 5 and 7, member of the class A family of seven-transmembrane G ...
38-138 1.05e-05

serotonin receptor subtypes 1, 5 and 7, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes serotonin receptor subtypes 1, 5, and 7 that are activated by the neurotransmitter serotonin. The 5-HT1 and 5-HT5 receptors mediate inhibitory neurotransmission by coupling to G proteins of the G(i/o) family. The 5-HT1 receptor subfamily includes 5-HT1A, 5-HT1B, 5-HT1D, 5-HT1E, and 5-HT1F. There is no 5-HT1C receptor subtype, as it has been reclassified as 5-HT2C receptor. The 5-HT5A and 5-HT5B receptors have been cloned from rat and mouse, but only the 5-HT5A isoform has been identified in human because of the presence of premature stop codons in the human 5-HT5B gene, which prevents a functional receptor from being expressed. The 5-HT7 receptor is coupled to Gs, which positively stimulates adenylate cyclase activity, leading to increased intracellular cAMP formation and calcium influx. In the CNS, serotonin is involved in the regulation of appetite, mood, sleep, cognition, learning and memory, as well as implicated in neurologic disorders such as migraine, schizophrenia, and depression.


Pssm-ID: 320192 [Multi-domain]  Cd Length: 258  Bit Score: 46.94  E-value: 1.05e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392928093  38 FIVTLTVATNSF-IVVVLSHKYLRTPTNYVLLAMAVTELLTGLSCLPwFTYYYTLSGYKNdLQTGLPSFW--CDMIPYMA 114
Cdd:cd15064    9 LIILATILGNALvIAAILLTRKLHTPANYLIASLAVADLLVAVLVMP-LSAVYELTGRWI-LGQVLCDIWisLDVTCCTA 86
                         90       100
                 ....*....|....*....|....
gi 392928093 115 aflpSIFHTMAIWLTVYLAIQRYI 138
Cdd:cd15064   87 ----SILHLCVIALDRYWAITDAV 106
7tmA_TAAR2_3_4 cd15312
trace amine-associated receptors 2, 3, 4, and similar receptors, member of the class A family ...
29-161 1.38e-05

trace amine-associated receptors 2, 3, 4, and similar receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; TAAR2, TAAR3, and TAAR4 are among the 15 identified trace amine-associated receptor subtypes, which form a distinct subfamily within the class A G protein-coupled receptor family. Trace amines are endogenous amines of unknown function that have strong structural and metabolic similarity to classical monoamine neurotransmitters (serotonin, noradrenaline, adrenaline, dopamine, and histamine), which play critical roles in human and animal physiological activities such as cognition, consciousness, mood, motivation, perception, and autonomic responses. However, trace amines are found in the mammalian brain at very low concentrations compared to classical monoamines. Trace amines, including p-tyramine, beta-phenylethylamine, and tryptamine, are also thought to act as chemical messengers to exert their biological effects in vertebrates. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320437 [Multi-domain]  Cd Length: 289  Bit Score: 46.96  E-value: 1.38e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392928093  29 VPMYGYMMPFIVtLTVATNSFIVVVLSH-KYLRTPTNYVLLAMAVTELLTGLSCLPwFTYYYTLSG--YKNDLQTGLPSF 105
Cdd:cd15312    1 VAMYLFMAGAIL-LTVFGNLMVIISISHfKQLHSPTNFLILSLAITDFLLGFLVMP-YSMVRSVEScwYFGDLFCKIHSS 78
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 392928093 106 wCDMIPYMAaflpSIFHTMAIwltvylAIQRYIYICVPSLVRKFCTIHRSKQVIFF 161
Cdd:cd15312   79 -LDMMLSTT----SIFHLCFI------AVDRYYAVCDPLHYRTKITTPVIKVFLVI 123
7tmA_mAChR_GAR-2-like cd15302
muscarinic acetylcholine receptor GAR-2 and similar proteins, member of the class A family of ...
33-250 2.35e-05

muscarinic acetylcholine receptor GAR-2 and similar proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; Muscarinic acetylcholine receptors (mAChRs) regulate the activity of many fundamental central and peripheral functions. The mAChR family consists of 5 subtypes M1-M5, which can be further divided into two major groups according to their G-protein coupling preference. The M1, M3 and M5 receptors selectively interact with G proteins of the G(q/11) family, whereas the M2 and M4 receptors preferentially link to the G(i/o) types of G proteins. Activation of mAChRs by agonist (acetylcholine) leads to a variety of biochemical and electrophysiological responses. In general, the exact nature of these responses and the subsequent physiological effects mainly depend on the molecular and pharmacological identity of the activated receptor subtype(s). All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320429 [Multi-domain]  Cd Length: 266  Bit Score: 46.27  E-value: 2.35e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392928093  33 GYMMPFIVTLTVATNsfIVVVLSH---KYLRTPTNYVLLAMAVTELLTGLSCLPWFTYYYtLSGYKNDLQtglpSFWCDM 109
Cdd:cd15302    4 ALITAILSIITVIGN--ILVLLSFyvdRNIRQPSNYFIASLAVSDLLIGLESMPFYTVYV-LNGDYWPLG----WVLCDL 76
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392928093 110 ---IPYMAAfLPSIFHTMAIwltvylAIQRYIYICVPSLVRKFCTIHRSKQVIFFIISVATIMYTPDLM---AFHNKSHD 183
Cdd:cd15302   77 wlsVDYTVC-LVSIYTVLLI------TIDRYCSVKIPAKYRNWRTPRKVLLIIAITWIIPALLFFISIFgwqYFTGQGRS 149
                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 392928093 184 VFDSKrnrtmklCYrhrAPFMlklgDDIYYKVMFTTQTVAVHLIpsVLLVIFTwklvGAIRVADRRH 250
Cdd:cd15302  150 LPEGE-------CY---VQFM----TDPYFNMGMYIGYYWTTLI--VMLILYA----GIYRAANRAR 196
7tmA_Trissin_R cd15012
trissin receptor and related proteins, member of the class A family of seven-transmembrane G ...
50-234 2.50e-05

trissin receptor and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This subgroup represents the Drosophila melanogaster trissin receptor and closely related invertebrate proteins which are a member of the class A family of seven-transmembrane G-protein coupled receptors. The cysteine-rich trissin has been shown to be an endogenous ligand for the orphan CG34381 in Drosophila melanogaster. Trissin is a peptide composed of 28 amino acids with three intrachain disulfide bonds with no significant structural similarities to known endogenous peptides. Cysteine-rich peptides are known to have antimicrobial or toxicant activities, although frequently their mechanism of action is poorly understood. Since the expression of trissin and its receptor is reported to predominantly localize to the brain and thoracicoabdominal ganglion, trissin is predicted to behave as a neuropeptide. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320140 [Multi-domain]  Cd Length: 277  Bit Score: 46.28  E-value: 2.50e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392928093  50 IVVVLSHKYLRTPTNYVLLAMAVTELLTGLSCLPWFTYYYTLSGYkndlqtglpsFWCDMIPYMAAFLPSIFHTMAIWLT 129
Cdd:cd15012   21 ILVVTSHRRMRTITNFFLANLAVADLCVGIFCVLQNLSIYLIPSW----------PFGEVLCRMYQFVHSLSYTASIGIL 90
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392928093 130 VYLAIQRYIYICVPSLVRKFCTIHRSKQVIFFIISVATIMYTPDLMAFHNKSHDVfDSKRNRTMkLCYRHRAPFMLKLGD 209
Cdd:cd15012   91 VVISVERYIAILHPLRCKQLLTAARLRVTIVTVWLTSAVYNTPYFVFSQTVEILV-TQDGQEEE-ICVLDREMFNSKLYD 168
                        170       180
                 ....*....|....*....|....*
gi 392928093 210 DIYYKVMFttqtvavhLIPSVLLVI 234
Cdd:cd15012  169 TINFIVWY--------LIPLLIMTV 185
7tmA_TACR cd15390
neurokinin receptors (or tachykinin receptors), member of the class A family of ...
34-220 2.51e-05

neurokinin receptors (or tachykinin receptors), member of the class A family of seven-transmembrane G protein-coupled receptors; This group represents G-protein coupled receptors for a variety of neuropeptides of the tachykinin (TK) family. The tachykinins are widely distributed throughout the mammalian central and peripheral nervous systems and act as excitatory transmitters on neurons and cells in the gastrointestinal tract. The TKs are characterized by a common five-amino acid C-terminal sequence, Phe-X-Gly-Leu-Met-NH2, where X is a hydrophobic residue. The three major mammalian tachykinins are substance P (SP), neurokinin A (NKA), and neurokinin B (NKB). The physiological actions of tachykinins are mediated through three types of receptors: neurokinin receptor type 1 (NK1R), NK2R, and NK3R. SP is a high-affinity endogenous ligand for NK1R, which interacts with the Gq protein and activates phospholipase C, leading to elevation of intracellular calcium. NK2R is a high-affinity receptor for NKA, the tachykinin neuropeptide substance K. SP and NKA are found in the enteric nervous system and mediate in the regulation of gastrointestinal motility, secretion, vascular permeability, and pain perception. NK3R is activated by its high-affinity ligand, NKB, which is primarily involved in the central nervous system and plays a critical role in the regulation of gonadotropin hormone release and the onset of puberty.


Pssm-ID: 320512 [Multi-domain]  Cd Length: 289  Bit Score: 46.13  E-value: 2.51e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392928093  34 YMMPFIVTLTVAT-NSFIV--VVLSHKYLRTPTNYVLLAMAVTELLT-GLSCLPWFTYYYTlsgykNDLQTGLpsFWCDM 109
Cdd:cd15390    3 WSIVFVVMVLVAIgGNLIViwIVLAHKRMRTVTNYFLVNLAVADLLIsAFNTVFNFTYLLY-----NDWPFGL--FYCKF 75
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392928093 110 IPYMA--AFLPSIFHTMAIWLTVYLAIqryIYICVPSLVRKfctihRSKQVIFFIISVATIMYTPDLMAFHNKSHDVFDS 187
Cdd:cd15390   76 SNFVAitTVAASVFTLMAISIDRYIAI---VHPLRPRLSRR-----TTKIAIAVIWLASFLLALPQLLYSTTETYYYYTG 147
                        170       180       190
                 ....*....|....*....|....*....|...
gi 392928093 188 KrnrTMKLCYRHRAPFMLKLGDDIYYKVMFTTQ 220
Cdd:cd15390  148 S---ERTVCFIAWPDGPNSLQDFVYNIVLFVVT 177
7tmA_Dop1R2-like cd15067
dopamine 1-like receptor 2 from Drosophila melanogaster and similar proteins, member of the ...
42-135 2.95e-05

dopamine 1-like receptor 2 from Drosophila melanogaster and similar proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; G protein-coupled dopamine 1-like receptor 2 is expressed in Drosophila heads and it shows significant sequence similarity with vertebrate and invertebrate dopamine receptors. Although the Drosophila Dop1R2 receptor does not cluster into the D1-like structural group, it does show pharmacological properties similar to D1-like receptors. As shown in vertebrate D1-like receptors, agonist stimulation of Dop1R2 activates adenylyl cyclase to increase cAMP levels and also generates a calcium signal through stimulation of phospholipase C.


Pssm-ID: 320195 [Multi-domain]  Cd Length: 262  Bit Score: 45.81  E-value: 2.95e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392928093  42 LTVATNSF-IVVVLSHKYLRTPTNYVLLAMAVTELLTGLSCLPWFTYYYTLSGYkndLQTGLpsFWCDM---IPYMAAfL 117
Cdd:cd15067   12 VTVAGNLLvILAVLRERYLRTVTNYFIVSLAVADLLVGSIVMPFSILHEMTGGY---WLFGR--DWCDVwhsFDVLAS-T 85
                         90
                 ....*....|....*...
gi 392928093 118 PSIFHTMAIWLTVYLAIQ 135
Cdd:cd15067   86 ASILNLCVISLDRYWAIT 103
7tmA_capaR cd15134
neuropeptide capa receptor and similar invertebrate proteins, member of the class A family of ...
51-172 3.36e-05

neuropeptide capa receptor and similar invertebrate proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; CapaR is a G-protein coupled receptor for the Drosophila melanogaster capa neuropeptides (Drm-capa-1 and -2), which act on the Malpighian tubules to increase fluid transport. The capa peptides are evolutionarily related to vertebrate Neuromedin U neuropeptide and contain a C-terminal FPRXamide motif. CapaR regulates fluid homeostasis through its ligands, thereby acts as a desiccation stress-responsive receptor. CapaR undergoes desensitization, with internalization mediated by beta-arrestin-2.


Pssm-ID: 320262 [Multi-domain]  Cd Length: 298  Bit Score: 45.78  E-value: 3.36e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392928093  51 VVVLSHKYLRTPTNYVLLAMAVTELLTGLSCLPwFTYYYTLSGYkndlqtglPSFWCDMIPYMAAFLPSIFHTMAIWLTV 130
Cdd:cd15134   23 IVIARNRSMHTATNYYLFSLAVSDLLLLILGLP-FELYTIWQQY--------PWVFGEVFCKLRAFLSEMSSYASVLTIT 93
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|..
gi 392928093 131 YLAIQRYIYICVPSLVRKFCTIHRSKQVIFFIISVATIMYTP 172
Cdd:cd15134   94 AFSVERYLAICHPLRSHTMSKLSRAIRIIIAIWIIAFVCALP 135
7tmA_NPYR-like cd15203
neuropeptide Y receptors and related proteins, member of the class A family of ...
50-190 3.52e-05

neuropeptide Y receptors and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; NPY is a 36-amino acid peptide neurotransmitter with a C-terminal tyrosine amide residue that is widely distributed in the brain and the autonomic nervous system of many mammalian species. NPY exerts its functions through five, G-protein coupled receptor subtypes including NPY1R, NPY2R, NPY4R, NPY5R, and NPY6R; however, NPY6R is not functional in humans. NYP receptors are also activated by its two other family members, peptide YY (PYY) and pancreatic polypeptide (PP). They typically couple to Gi or Go proteins, which leads to a decrease in adenylate cyclase activity, thereby decreasing intracellular cAMP levels, and are involved in diverse physiological roles including appetite regulation, circadian rhythm, and anxiety. Also included in this subgroup is prolactin-releasing peptide (PrRP) receptor (previously known as GPR10), which is activated by its endogenous ligand PrRP, a neuropeptide possessing C-terminal Arg-Phe-amide motif. There are two active isoforms of PrRP in mammals: one consists of 20 amino acid residues (PrRP-20) and the other consists of 31 amino acid residues (PrRP-31). PrRP receptor shows significant sequence homology to the NPY receptors, and a micromolar level of NPY can bind and completely inhibit the PrRP-evoked intracellular calcium response in PrRP receptor-expressing cells, suggesting that the PrRP receptor shares a common ancestor with the NPY receptors.


Pssm-ID: 320331 [Multi-domain]  Cd Length: 293  Bit Score: 45.67  E-value: 3.52e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392928093  50 IVVVLSHKYLRTPTNYVLLAMAVTELLTGLSCLPwFTYYYTLSGYkndlqTGLPSFWCDMIPYMAAFlpSIFhtMAIWLT 129
Cdd:cd15203   22 IYVVLRNKSMQTVTNIFILNLAVSDLLLCLVSLP-FTLIYTLTKN-----WPFGSILCKLVPSLQGV--SIF--VSTLTL 91
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 392928093 130 VYLAIQRYIYICVPslVRKFCTIHRSKQVIFFIISVATIMYTPdLMAFHNKSHDVFDSKRN 190
Cdd:cd15203   92 TAIAIDRYQLIVYP--TRPRMSKRHALLIIALIWILSLLLSLP-LAIFQELSDVPIEILPY 149
7tmA_TAAR1 cd15314
trace amine-associated receptor 1 and similar receptors, member of the class A family of ...
29-83 4.35e-05

trace amine-associated receptor 1 and similar receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; The trace amine-associated receptor 1 (TAAR1) is one of the 15 identified trace amine-associated receptor subtypes, which form a distinct subfamily within the class A G protein-coupled receptor family. Trace amines are endogenous amines of unknown function that have strong structural and metabolic similarity to classical monoamine neurotransmitters (serotonin, noradrenaline, adrenaline, dopamine, and histamine), which play critical roles in human and animal physiological activities such as cognition, consciousness, mood, motivation, perception, and autonomic responses. However, trace amines are found in the mammalian brain at very low concentrations compared to classical monoamines. TAAR1 is coupled to the Gs protein, which leads to activation of adenylate cyclase, and is thought to play functional role in the regulation of brain monoamines. TAAR1 is also shown to be activated by psychoactive compounds such as Ecstasy (MDMA), amphetamine and LSD. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320438 [Multi-domain]  Cd Length: 282  Bit Score: 45.31  E-value: 4.35e-05
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 392928093  29 VPMYGYMMpFIVTLTVATNSFIVVVLSH-KYLRTPTNYVLLAMAVTELLTGLSCLP 83
Cdd:cd15314    1 VLLYIFLG-LISLVTVCGNLLVIISIAHfKQLHTPTNYLILSLAVADLLVGGLVMP 55
7tmA_CCK-BR cd15979
cholecystokinin receptor type B, member of the class A family of seven-transmembrane G ...
35-202 5.04e-05

cholecystokinin receptor type B, member of the class A family of seven-transmembrane G protein-coupled receptors; Cholecystokinin receptors (CCK-AR and CCK-BR) are a group of G-protein coupled receptors which bind the peptide hormones cholecystokinin (CCK) or gastrin. CCK, which facilitates digestion in the small intestine, and gastrin, a major regulator of gastric acid secretion, are highly similar peptides. Like gastrin, CCK is a naturally-occurring linear peptide that is synthesized as a preprohormone, then proteolytically cleaved to form a family of peptides with the common C-terminal sequence (Gly-Trp-Met-Asp-Phe-NH2), which is required for full biological activity. CCK-AR (type A, alimentary; also known as CCK1R) is found abundantly on pancreatic acinar cells and binds only sulfated CCK-peptides with very high affinity, whereas CCK-BR (type B, brain; also known as CCK2R), the predominant form in the brain and stomach, binds CCK or gastrin and discriminates poorly between sulfated and non-sulfated peptides. CCK is implicated in regulation of digestion, appetite control, and body weight, and is involved in neurogenesis via CCK-AR. There is some evidence to support that CCK and gastrin, via their receptors, are involved in promoting cancer development and progression, acting as growth and invasion factors.


Pssm-ID: 320645 [Multi-domain]  Cd Length: 275  Bit Score: 45.19  E-value: 5.04e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392928093  35 MMPFIVTLTVATNSFIVVVLS-HKYLRTPTNYVLLAMAVTELLTGLSCLPwFTYYYTLSGyknDLQTGlpsfwcDMIPYM 113
Cdd:cd15979    6 LYSVIFLLSVFGNMLIIVVLGlNKRLRTVTNSFLLSLALSDLMLAVFCMP-FTLIPNLMG---TFIFG------EVICKA 75
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392928093 114 AAFLPSIFHTMAIWLTVYLAIQRYIYICVPSLVRKFCTIHRSKQVIFFIISVATIMYTPDLMAFHNKSHdvfdSKRNRTM 193
Cdd:cd15979   76 VAYLMGVSVSVSTFSLVAIAIERYSAICNPLQSRVWQTRSHAYRVIAATWLLSGLIMIPYPVYSVTVPV----PVGDRPR 151

                 ....*....
gi 392928093 194 KLCYRHRAP 202
Cdd:cd15979  152 GHQCRHAWP 160
7tmA_NPY2R cd15399
neuropeptide Y receptor type 2, member of the class A family of seven-transmembrane G ...
39-166 5.42e-05

neuropeptide Y receptor type 2, member of the class A family of seven-transmembrane G protein-coupled receptors; NPY is a 36-amino acid peptide neurotransmitter with a C-terminal tyrosine amide residue that is widely distributed in the brain and the autonomic nervous system of many mammalian species. NPY exerts its functions through five, G-protein coupled receptor subtypes including NPY1R, NPY2R, NPY4R, NPY5R, and NPY6R; however, NPY6R is not functional in humans. NYP receptors are also activated by its two other family members, peptide YY (PYY) and pancreatic polypeptide (PP). They typically couple to G(i) or G(o) proteins, which leads to a decrease in adenylate cyclase activity, thereby decreasing intracellular cAMP levels, and are involved in diverse physiological roles including appetite regulation, circadian rhythm, and anxiety. When NPY signals through NPY2R in concert with NPY5R, it induces angiogenesis and consequently plays an important role in revascularization and wound healing. On the other hand, when NPY acts through NPY1R and NPYR5, it acts as a vascular mitogen, leading to restenosis and atherosclerosis.


Pssm-ID: 320521 [Multi-domain]  Cd Length: 285  Bit Score: 45.20  E-value: 5.42e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392928093  39 IVTLTVATNSFIV-VVLSHKYLRTPTNYVLLAMAVTELLTGLSCLPwFTYYYTLSGykndlQTGLPSFWCDMIPYMAAFl 117
Cdd:cd15399   10 IILLGVVGNSLVIyVVIKFKNMRTVTNFFIANLAVADLMVNTLCLP-FTLVYTLLD-----EWKFGAVLCHLVPYAQAL- 82
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*....
gi 392928093 118 psIFHTMAIWLTVyLAIQRYIYIcVPSLVRKFctihrSKQVIFFIISVA 166
Cdd:cd15399   83 --AVHVSTVTLTV-IALDRHRCI-VYHLESKI-----SKKISFLIIGLT 122
7tmA_GHSR-like cd15928
growth hormone secretagogue receptor, motilin receptor, and related proteins, member of the ...
50-377 5.94e-05

growth hormone secretagogue receptor, motilin receptor, and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This subfamily includes growth hormone secretagogue receptor (GHSR or ghrelin receptor), motilin receptor (also called GPR38), and related proteins. Both GHSR and GPR38 bind peptide hormones. Ghrelin, the endogenous ligand for GHSR, is an acylated 28-amino acid peptide hormone produced by ghrelin cells in the gastrointestinal tract. Ghrelin is also called the hunger hormone and is involved in the regulation of growth hormone release, appetite and feeding, gut motility, lipid and glucose metabolism, and energy balance. Motilin, the ligand for GPR38, is a 22 amino acid peptide hormone expressed throughout the gastrointestinal tract and stimulates contraction of gut smooth muscle. It is involved in the regulation of digestive tract motility.


Pssm-ID: 320594 [Multi-domain]  Cd Length: 288  Bit Score: 45.17  E-value: 5.94e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392928093  50 IVVVLSHKYLRTPTNYVLLAMAVTELLTGLsCLPWFTYyytlsgyknDLQTGLPSFWCDMIPYMAAFLPSIFHTMAIWLT 129
Cdd:cd15928   22 VLVIGRSRDMRTTTNLYLSSLAVSDLLIFL-VLPLDLY---------RLWRYRPWRFGDLLCRLMYFFSETCTYASILHI 91
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392928093 130 VYLAIQRYIYICVPSLVRKFCTIHRSKQVIFFIISVATIMYTPDLMAF---HNKSHDVFDSKRNRTmklcyrhrAPFMLK 206
Cdd:cd15928   92 TALSVERYLAICHPLRAKVLVTRGRVKLLIAVIWAVAIVSAGPALVLVgveHIQGQQTPRGFECTV--------VNVSSG 163
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392928093 207 LGddiyyKVMFTTQTvAVHLIPSVLLVIFtwklvgairvadrrhanllskYSTTTRstrrkfsELTNSSenenkitrlfk 286
Cdd:cd15928  164 LL-----SVMLWVST-SFFFVPMVCLSLL---------------------YGLIGR-------ALWDRR----------- 198
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392928093 287 qRDSVSVGNEpRRAHGLKQNTRMLVVVILLFLITEIPaaliftIHVLSVSLKFSFVD----YQFLNILLIVRNVLIVVSY 362
Cdd:cd15928  199 -QRSRTAGAS-RRDNNHRQTVRMLAVIVLAFVLCWLP------FHVGRVIFNHSRAStkhlHYVSQYFNLVSFVLFYLSA 270
                        330
                 ....*....|....*
gi 392928093 363 PFRFAIYCGMSQQFR 377
Cdd:cd15928  271 AINPILYNLMSKRYR 285
7tmA_5-HT2A cd15304
serotonin receptor subtype 2A, member of the class A family of seven-transmembrane G ...
39-139 6.10e-05

serotonin receptor subtype 2A, member of the class A family of seven-transmembrane G protein-coupled receptors; The 5-HT2 receptors are a subfamily of serotonin receptors that bind the neurotransmitter serotonin (5HT; 5-hydroxytryptamine) in the central nervous system (CNS). The 5-HT2 subfamily is composed of three subtypes that mediate excitatory neurotransmission: 5-HT2A, 5-HT2B, and 5-HT2C. They are selectively linked to G proteins of the G(q/11) family and activate phospholipase C, which leads to activation of protein kinase C and calcium release. In the CNS, serotonin is involved in the regulation of appetite, mood, sleep, cognition, learning and memory, as well as implicated in diseases such as migraine, schizophrenia, and depression. Indeed, 5-HT2 receptors are attractive targets for a variety of psychoactive drugs, ranging from atypical antipsychotic drugs, antidepressants, and anxiolytics, which have an antagonistic action on 5-HT2 receptors, to hallucinogens, which act as agonists at postsynaptic 5-HT2 receptors. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 341345 [Multi-domain]  Cd Length: 267  Bit Score: 44.92  E-value: 6.10e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392928093  39 IVTLTVATNSFIVVVLS-HKYLRTPTNYVLLAMAVTELLTGLSCLPwFTYYYTLSGYKndlqTGLPSFWCDMIPYMAAFL 117
Cdd:cd15304   10 VIILTIAGNILVIMAVSlEKKLQNATNYFLMSLAIADMLLGFLVMP-VSMLTILYGYR----WPLPSKLCAVWIYLDVLF 84
                         90       100
                 ....*....|....*....|....
gi 392928093 118 P--SIFHTMAIWLTVYLAIQRYIY 139
Cdd:cd15304   85 StaSIMHLCAISLDRYIAIRNPIH 108
7tmA_NMU-R cd15133
neuromedin U receptors, member of the class A family of seven-transmembrane G protein-coupled ...
34-378 6.42e-05

neuromedin U receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Neuromedin U (NMU) is a highly conserved neuropeptide with a common C-terminal heptapeptide sequence (FLFRPRN-amide) found at the highest levels in the gastrointestinal tract and pituitary gland of mammals. Disruption or replacement of residues in the conserved heptapeptide region can result in the reduced ability of NMU to stimulate smooth-muscle contraction. Two G-protein coupled receptor subtypes, NMU-R1 and NMU-R2, with a distinct expression pattern, have been identified to bind NMU. NMU-R1 is expressed primarily in the peripheral nervous system, while NMU-R2 is mainly found in the central nervous system. Neuromedin S, a 36 amino-acid neuropeptide that shares a conserved C-terminal heptapeptide sequence with NMU, is a highly potent and selective NMU-R2 agonist. Pharmacological studies have shown that both NMU and NMS inhibit food intake and reduce body weight, and that NMU increases energy expenditure.


Pssm-ID: 320261 [Multi-domain]  Cd Length: 298  Bit Score: 44.83  E-value: 6.42e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392928093  34 YMMPFIVTLtVATNSFIVVVLSHKYLRTPTNYVLLAMAVTELLTGLSCLP------WFTYYYTLSGYKNDLQTGLPSFWC 107
Cdd:cd15133    7 YLLIFVVGV-VGNVLTCLVIARHKAMRTPTNYYLFSLAVSDLLVLLLGMPlelyelWQNYPFLLGSGGCYFKTFLFETVC 85
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392928093 108 dmipymaafLPSIFHTMAiwltvyLAIQRYIYICVPSLVRKFCTIHRSKQVIFFIISVATIMYTPdlmafHNKSHDVFDS 187
Cdd:cd15133   86 ---------LASILNVTA------LSVERYIAVVHPLAARTCSTRPRVTRVLGCVWGVSMLCALP-----NTSLHGIKFL 145
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392928093 188 KRNRTMKLCYRHRAPFMlklgddIYYKVMFTTQTVAVHLIPSVLLVIFtwkLVGAIRVadRRHANLLSkystttrstrrk 267
Cdd:cd15133  146 GSGVPASAQCTVRKPQA------IYNMIPQHTGHLFFVLPMAVISVLY---LLMALRL--ARERGLDA------------ 202
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392928093 268 fseltnssenenkitRLFKQRDSVSVGNEPRRAHGLKQNTRMLVVVILLFLITEIPaaliFTIHvlsvSLKFSFVD---- 343
Cdd:cd15133  203 ---------------TGAGSKIGTRTGQLLQHPRTRAQVTKMLFILVVVFAICWAP----FHID----RLMWSFISdwtd 259
                        330       340       350
                 ....*....|....*....|....*....|....*..
gi 392928093 344 --YQFLNILLIVRNVLIVVSYPFRFAIYCGMSQQFRD 378
Cdd:cd15133  260 nlHEVFQYVHIISGVFFYLSSAVNPILYNLMSTRFRE 296
7tmA_Adenosine_R_A2B cd15069
adenosine receptor subtype 2AB, member of the class A family of seven-transmembrane G ...
39-159 8.60e-05

adenosine receptor subtype 2AB, member of the class A family of seven-transmembrane G protein-coupled receptors; The A2B receptor, a member of the adenosine receptor family of G protein-coupled receptors, binds adenosine as its endogenous ligand and is involved in regulating myocardial oxygen consumption and coronary blood flow. High-affinity A2A and low-affinity A2B receptors are preferentially coupled to G proteins of the stimulatory (Gs) family, which lead to activation of adenylate cyclase and thereby increasing the intracellular cAMP levels. The A2A receptor activation protects against tissue injury and acts as anti-inflammatory agent. In human skin endothelial cells, activation of A2B receptor, but not the A2A receptor, promotes angiogenesis. Alternatively, activated A2A receptor, but not the A2B receptor, promotes angiogenesis in human umbilical vein and lung microvascular endothelial cells. The A2A receptor alters cardiac contractility indirectly by modulating the anti-adrenergic effect of A1 receptor, while the A2B receptor exerts direct effects on cardiac contractile function, but does not modulate beta-adrenergic or A1 anti-adrenergic effects.


Pssm-ID: 320197 [Multi-domain]  Cd Length: 294  Bit Score: 44.54  E-value: 8.60e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392928093  39 IVTLTVATNSFIV-VVLSHKYLRTPTNYVLLAMAVTELLTGLSCLPwftYYYTLS-GYKNDLQTGLpsfwcdmipYMAAF 116
Cdd:cd15069   10 IAALSVAGNVLVCaAVGTNSTLQTPTNYFLVSLAAADVAVGLFAIP---FAITISlGFCTDFHSCL---------FLACF 77
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*...
gi 392928093 117 L-----PSIFHTMAIwltvylAIQRYIYICVPSLVRKFCTIHRSKQVI 159
Cdd:cd15069   78 VlvltqSSIFSLLAV------AVDRYLAIKVPLRYKSLVTGKRARGVI 119
7tmA_5-HT7 cd15329
serotonin receptor subtype 7, member of the class A family of seven-transmembrane G ...
38-136 1.01e-04

serotonin receptor subtype 7, member of the class A family of seven-transmembrane G protein-coupled receptors; The 5-HT7 receptor, one of 14 mammalian serotonin receptors, is a member of the class A of GPCRs and is activated by the neurotransmitter serotonin (5-hydroxytryptamine, 5-HT). 5-HT7 receptor mainly couples to Gs protein, which positively stimulates adenylate cyclase, leading to increased intracellular cAMP formation and calcium influx. 5-HT7 receptor is expressed in various human tissues, mainly in the brain, the lower gastrointestinal tract and in vital blood vessels including the coronary artery. In the CNS, serotonin is involved in the regulation of appetite, mood, sleep, cognition, learning and memory, as well as implicated in neurologic disorders such as migraine, schizophrenia, and depression.


Pssm-ID: 320452 [Multi-domain]  Cd Length: 260  Bit Score: 44.18  E-value: 1.01e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392928093  38 FIVTLTVATNSFIVV-VLSHKYLRTPTNYVLLAMAVTELLTGLSCLPwFTYYYTLSGYKNdlqtgLPSFWCDMIPYMAAF 116
Cdd:cd15329    9 IIILGTVVGNALVIIaVCLVKKLRTPSNYLIVSLAVSDLLVALLVMP-LAIIYELSGYWP-----FGEILCDVWISFDVL 82
                         90       100
                 ....*....|....*....|..
gi 392928093 117 L--PSIFHTMAIWLTVYLAIQR 136
Cdd:cd15329   83 LctASILNLCAISVDRYLVITR 104
7tmA_NMU-R1 cd15358
neuromedin U receptor subtype 1, member of the class A family of seven-transmembrane G ...
34-173 1.19e-04

neuromedin U receptor subtype 1, member of the class A family of seven-transmembrane G protein-coupled receptors; Neuromedin U (NMU) is a highly conserved neuropeptide with a common C-terminal heptapeptide sequence (FLFRPRN-amide) found at the highest levels in the gastrointestinal tract and pituitary gland of mammals. Disruption or replacement of residues in the conserved heptapeptide region can result in the reduced ability of NMU to stimulate smooth-muscle contraction. Two G-protein coupled receptor subtypes, NMU-R1 and NMU-R2, with a distinct expression pattern, have been identified to bind NMU. NMU-R1 is expressed primarily in the peripheral nervous system, while NMU-R2 is mainly found in the central nervous system. Neuromedin S, a 36 amino-acid neuropeptide that shares a conserved C-terminal heptapeptide sequence with NMU, is a highly potent and selective NMU-R2 agonist. Pharmacological studies have shown that both NMU and NMS inhibit food intake and reduce body weight, and that NMU increases energy expenditure.


Pssm-ID: 320480 [Multi-domain]  Cd Length: 305  Bit Score: 43.99  E-value: 1.19e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392928093  34 YMMPFIVTlTVATNSFIVVVLSHKYLRTPTNYVLLAMAVTELLTGLSCLPwFTYYYTLSGYKNDLQTGLPSFwcDMIPYM 113
Cdd:cd15358    7 YLLIFVVG-AVGNGLTCIVILRHKVMRTPTNYYLFSLAVSDLLVLLLGMP-LELYEMWSNYPFLLGAGGCYF--KTLLFE 82
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 392928093 114 AAFLPSIFHTMAiwltvyLAIQRYIYICVPSLVRKFCTIHRSKQVIFFIISVATIMYTPD 173
Cdd:cd15358   83 TVCFASILNVTA------LSVERYIAVVHPLKAKYVVTRTHAKRVIGAVWVVSILCSIPN 136
7tmA_TAAR5-like cd15317
trace amine-associated receptor 5 and similar receptors, member of the class A family of ...
38-178 1.22e-04

trace amine-associated receptor 5 and similar receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Included in this group are mammalian TAAR5, TAAR6, TAAR8, TAAR9, and similar proteins. They are among the 15 identified trace amine-associated receptors (TAARs), a distinct subfamily within the class A G protein-coupled receptors. Trace amines are endogenous amines of unknown function that have strong structural and metabolic similarity to classical monoamine neurotransmitters (serotonin, noradrenaline, adrenaline, dopamine, and histamine), which play critical roles in human and animal physiological activities such as cognition, consciousness, mood, motivation, perception, and autonomic responses. However, trace amines are found in the mammalian brain at very low concentrations compared to classical monoamines. Trace amines, including p-tyramine, beta-phenylethylamine, and tryptamine, are also thought to act as chemical messengers to exert their biological effects in vertebrates. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320440 [Multi-domain]  Cd Length: 290  Bit Score: 43.98  E-value: 1.22e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392928093  38 FIVTLTVATNSFIVVVLSH-KYLRTPTNYVLLAMAVTELLTGLSCLPWFT-------YYYTLSGYKndLQTGLPSFWCdm 109
Cdd:cd15317    9 LAMLITVSGNLVVIISISHfKQLHSPTNMLVLSLATADFLLGLCVMPFSMirtvetcWYFGDLFCK--FHTGLDLLLC-- 84
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 392928093 110 ipymaafLPSIFHTmaiwltVYLAIQRYIYICVPSLVRKFCTIhrskQVIFFIISVATI---MYTPDLMAFH 178
Cdd:cd15317   85 -------TTSIFHL------CFIAIDRYYAVCDPLRYPSKITV----QVAWRFIAIGWLvpgIYTFGLIYTG 139
7tmA_PR4-like cd15392
neuropeptide Y receptor-like found in insect and related proteins, member of the class A ...
31-143 1.33e-04

neuropeptide Y receptor-like found in insect and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This subgroup includes a novel G protein-coupled receptor (also known as PR4 receptor) from Drosophila melanogaster, which can be activated by the members of the neuropeptide Y (NPY) family, including NPY, peptide YY (PYY) and pancreatic polypeptide (PP), when expressed in Xenopus oocytes. These homologous peptides of 36-amino acids in length contain a hairpin-like structural motif, which referred to as the pancreatic polypeptide fold, and function as gastrointestinal hormones and neurotransmitters. The PR4 receptor also shares strong sequence homology to the mammalian tachykinin receptors (NK1R, NK2R, and NK3R), whose endogenous ligands are substance P (SP), neurokinin A (NKA), and neurokinin B (NKB), respectively. The tachykinins function as excitatory transmitters on neurons and cells in the gastrointestinal tract.


Pssm-ID: 320514 [Multi-domain]  Cd Length: 287  Bit Score: 43.89  E-value: 1.33e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392928093  31 MYGYMMPFIVTLTVATNSFIV-VVLSHKYLRTPTNYVLLAMAVTELLTGLSCLPwFTYYYTLsgYKNDLQTGlpSFWCDM 109
Cdd:cd15392    2 IIILMYSTIFVLAVGGNGLVCyIVVSYPRMRTVTNYFIVNLALSDILMAVFCVP-FSFIALL--ILQYWPFG--EFMCPV 76
                         90       100       110
                 ....*....|....*....|....*....|....
gi 392928093 110 IPYMAAFlpSIFhtMAIWLTVYLAIQRYIYICVP 143
Cdd:cd15392   77 VNYLQAV--SVF--VSAFTLVAISIDRYVAIMWP 106
7tmA_TRH-R cd14995
thyrotropin-releasing hormone receptor, member of the class A family of seven-transmembrane G ...
50-249 1.61e-04

thyrotropin-releasing hormone receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; TRH-R is a member of the class A rhodopsin-like G protein-coupled receptors, which binds the tripeptide thyrotropin releasing hormone. The TRH-R activates phosphoinositide metabolism through a pertussis-toxin-insensitive G-protein, the G(q)/G(11) class. TRH stimulates the synthesis and release of thyroid-stimulating hormone in the anterior pituitary. TRH is produced in many other tissues, especially within the nervous system, where it appears to act as a neurotransmitter/neuromodulator. It also stimulates the synthesis and release of prolactin. In the CNS, TRH stimulates a number of behavioral and pharmacological actions, including increased turnover of catecholamines in the nucleus accumbens. There are two thyrotropin-releasing hormone receptors in some mammals, thyrotropin-releasing hormone receptor 1 (TRH1) which has been found in a number of species including rat, mouse, and human and thyrotropin-releasing hormone receptor 2 (TRH2) which has, only been found in rodents. These TRH receptors are found in high levels in the anterior pituitary, and are also found in the retina and in certain areas of the brain.


Pssm-ID: 320126 [Multi-domain]  Cd Length: 269  Bit Score: 43.53  E-value: 1.61e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392928093  50 IVVVLSHKYLRTPTNYVLLAMAVTELLTGL-SCLPWFT-YYYTLSGYkndlqtglpsFWCDMIPYMAAFLPSI-FHTMAI 126
Cdd:cd14995   22 VLVVLRTRHMRTPTNCYLVSLAVADLMVLVaAGLPNEIeSLLGPDSW----------IYGYAGCLLITYLQYLgINASSL 91
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392928093 127 WLTVYlAIQRYIYICVPSLVRKFCTIHRSKQVIFFIISVATIMYTPDLMAFH-NKSHDVFDSKRNRTMKLCyRHrapfml 205
Cdd:cd14995   92 SITAF-TIERYIAICHPMKAQFICTVSRAKKIICFVWIFTSLYCSPWLFLLDlSIKHYGDDIVVRCGYKVS-RH------ 163
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....
gi 392928093 206 klgddiYYKVMFTTQTVAVHLIPsVLLVIFTWKLVGAIRVADRR 249
Cdd:cd14995  164 ------YYLPIYLADFVLFYVIP-LLLAIVLYGLIGRILFSSRK 200
7tmA_photoreceptors_insect cd15079
insect photoreceptors R1-R6 and similar proteins, member of the class A family of ...
31-143 1.62e-04

insect photoreceptors R1-R6 and similar proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes the insect photoreceptors and their closely related proteins. The Drosophila eye is composed of about 800 unit eyes called ommatidia, each of which contains eight photoreceptor cells (R1-R8). The six outer photoreceptors (R1-R6) function like the vertebrate rods and are responsible for motion detection in dim light and image formation. The R1-R6 photoreceptors express a blue-absorbing pigment, Rhodopsin 1(Rh1). The inner photoreceptors (R7 and R8) are considered the equivalent of the color-sensitive vertebrate cone cells, which express a range of different pigments. The R7 photoreceptors express one of two different UV absorbing pigments, either Rh3 or Rh4. Likewise, the R8 photoreceptors express either the blue absorbing pigment Rh5 or green absorbing pigment Rh6. These photoreceptors belong the class A of the G protein-coupled receptors and possess seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops.


Pssm-ID: 320207 [Multi-domain]  Cd Length: 292  Bit Score: 43.72  E-value: 1.62e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392928093  31 MYGYMMPFIVTLTVATNSFIV-VVLSHKYLRTPTNYVLLAMAVTELLTgLSCLPWFTYyytlsgykNDLQTG--LPSFWC 107
Cdd:cd15079    2 LLGFIYIFLGIVSLLGNGLVIyIFSTTKSLRTPSNMLVVNLAISDFLM-MIKMPIFIY--------NSFYEGwaLGPLGC 72
                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 392928093 108 DMIpymaAFLPSIFHTMAIWLTVYLAIQRYIYICVP 143
Cdd:cd15079   73 QIY----AFLGSLSGIGSIWTNAAIAYDRYNVIVKP 104
7tmA_Melanopsin-like cd15083
vertebrate melanopsins and related opsins, member of the class A family of seven-transmembrane ...
33-162 2.43e-04

vertebrate melanopsins and related opsins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group represent the Gq-coupled rhodopsin subfamily consists of melanopsins, insect photoreceptors R1-R6, invertebrate Gq opsins as well as their closely related opsins. Melanopsins (also called Opsin-4) are the primary photoreceptor molecules for non-visual functions such as the photo-entrainment of the circadian rhythm and pupillary constriction in mammals. Mammalian melanopsins are expressed only in the inner retina, whereas non-mammalian vertebrate melanopsins are localized in various extra-retinal tissues such as iris, brain, pineal gland, and skin. The outer photoreceptors (R1-R6) are the insect Drosophila equivalent to the vertebrate rods and are responsible for image formation and motion detection. The invertebrate G(q) opsins includes the arthropod and mollusk visual opsins as well as invertebrate melanopsins, which are also found in vertebrates. Arthropods possess color vision by the use of multiple opsins sensitive to different light wavelengths. Members of this subfamily belong to the class A of the G protein-coupled receptors and have seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops.


Pssm-ID: 320211 [Multi-domain]  Cd Length: 291  Bit Score: 43.09  E-value: 2.43e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392928093  33 GYMMPFIVTLTVATNSFIV-VVLSHKYLRTPTNYVLLAMAVTELLTGLSCLPWFTYyytlSGYKNDLQTGLPSfwCDMIp 111
Cdd:cd15083    4 GIFILIIGLIGVVGNGLVIyAFCRFKSLRTPANYLIINLAISDFLMCILNCPLMVI----SSFSGRWIFGKTG--CDMY- 76
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|.
gi 392928093 112 ymaAFLPSIFHTMAIWLTVYLAIQRYIYICVPSLVRKFCTIHRSKQVIFFI 162
Cdd:cd15083   77 ---GFSGGLFGIMSINTLAAIAVDRYLVITRPMKASVRISHRRALIVIAVV 124
7tmA_NPFFR2 cd15980
neuropeptide FF receptor 2, member of the class A family of seven-transmembrane G ...
28-349 4.21e-04

neuropeptide FF receptor 2, member of the class A family of seven-transmembrane G protein-coupled receptors; Neuropeptide FF (NPFF) is a mammalian octapeptide that belongs to a family of neuropeptides containing an RF-amide motif at their C-terminus that have been implicated in a wide range of physiological functions in the brain including pain sensitivity, insulin release, food intake, memory, blood pressure, and opioid-induced tolerance and hyperalgesia. The effects of these peptides are mediated through neuropeptide FF1 and FF2 receptors (NPFF1-R and NPFF2-R) which are predominantly expressed in the brain. NPFF induces pro-nociceptive effects, mainly through the NPFF1-R, and anti-nociceptive effects, mainly through the NPFF2-R. NPFF has been shown to inhibit adenylate cyclase via the Gi protein coupled to NPFF1-R.


Pssm-ID: 320646 [Multi-domain]  Cd Length: 299  Bit Score: 42.57  E-value: 4.21e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392928093  28 AVPMYGYMMPFIVTLtVATNSFIVVVLSHKYLRTPTNYVLLAMAVTELLTGLSCLPwftyyytlSGYKNDLQTGLPsfWC 107
Cdd:cd15980    1 AVFIASYLLIFLLCM-MGNGVVCFIVLRSKHMRTVTNLFILNLAISDLLVGIFCMP--------TTLLDNIIAGWP--FG 69
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392928093 108 DMIPYMAAFLPSIFHTMAIWLTVYLAIQRYIYICVPslVRKFCTIHRSKQVIFFIISVATIMYTPDLMAFH---NKSHDV 184
Cdd:cd15980   70 STVCKMSGMVQGISVSASVFTLVAIAVDRFRCIVYP--FKQKLTISTAVVIIVIIWVLAIAIMCPSAVMLHvqeEKNYRV 147
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392928093 185 FDSKRNRTMKLcYRHRAPFMLKLGDDIYYKVMFTTqtvaVHLIPSVLLVIFtWKLVGairvadrrhanlLSKYSTTTRST 264
Cdd:cd15980  148 VLGSQNKTSPV-YWCREDWPNQEMRKIYTTVLFAN----IYLAPLSLIVIM-YARIG------------ITLFKTAMPHT 209
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392928093 265 RRKFSEltnssenenkitrlfkQRDSVSvgnepRRAHGLkqnTRMLVVVILLFLITEIPaalIFTIHVLSVSLKFSFVDY 344
Cdd:cd15980  210 GKHNQE----------------QRHVVS-----RKKQKV---IKMLLIVALLFILSWLP---LWTLMMLSDYANLSPNQL 262

                 ....*
gi 392928093 345 QFLNI 349
Cdd:cd15980  263 QIINI 267
7tmA_QRFPR cd15205
pyroglutamylated RFamide peptide receptor, member of the class A family of seven-transmembrane ...
39-172 5.59e-04

pyroglutamylated RFamide peptide receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; 26RFa, also known as QRFP (Pyroglutamylated RFamide peptide), is a 26-amino acid residue peptide that belongs to a family of neuropeptides containing an Arg-Phe-NH2 (RFamide) motif at its C-terminus. 26Rfa/QRFP exerts similar orexigenic activity including the regulation of feeding behavior in mammals. It is the ligand for G-protein coupled receptor 103 (GPR103), which is predominantly expressed in paraventricular (PVN) and ventromedial (VMH) nuclei of the hypothalamus. GPR103 shares significant protein sequence homology with orexin receptors (OX1R and OX2R), which have recently shown to produce a neuroprotective effect in Alzheimer's disease by forming a functional heterodimer with GPR103.


Pssm-ID: 320333 [Multi-domain]  Cd Length: 298  Bit Score: 42.08  E-value: 5.59e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392928093  39 IVTLTVATNSF-IVVVLSHKYLRTPTNYVLLAMAVTELLTGLSCLPwFTYYYTLSgykNDLQTGlpSFWCDMIPYM--AA 115
Cdd:cd15205   10 IFVLALFGNSLvIYVVTRKRAMRTATNIFICSLALSDLLITFFCIP-FTLLQNIS---SNWLGG--AFMCKMVPFVqsTA 83
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 392928093 116 FLPSIFHTMAIwltvylAIQRYIYICVPSLVRKFCTIHRSKQVIFFIISVATIMYTP 172
Cdd:cd15205   84 VVTSILTMTCI------AVERHQGIVHPLKMKWQYTNRRAFTMLGLVWIVSVIVGSP 134
7tmA_KiSS1R cd15095
KiSS1-derived peptide (kisspeptin) receptor, member of the class A family of ...
21-235 5.68e-04

KiSS1-derived peptide (kisspeptin) receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; The G protein-coupled KiSS1-derived peptide receptor (GPR54 or kisspeptin receptor) binds the peptide hormone kisspeptin (previously known as metastin), which encoded by the metastasis suppressor gene (KISS1) expressed in various endocrine and reproductive tissues. The KiSS1 receptor is coupled to G proteins of the G(q/11) family, which lead to activation of phospholipase C and increase of intracellular calcium. This signaling cascade plays an important role in reproduction by regulating the secretion of gonadotropin-releasing hormone.


Pssm-ID: 320223 [Multi-domain]  Cd Length: 288  Bit Score: 41.88  E-value: 5.68e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392928093  21 IMVPVDWAVpmygymmpfIVTLTVATNSFIV-VVLSHKYLRTPTNYVLLAMAVTELLTGLSCLPWFTYYYTLSGYKndlq 99
Cdd:cd15095    1 WLVPLIFAI---------IFLVGLAGNSLVIyVVSRHREMRTVTNYYIVNLAVTDLAFLVCCVPFTAALYATPSWV---- 67
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392928093 100 tgLPSFWCDMIPYMaafLPSIFHTMAIWLTVyLAIQRYIYICVPSLVRKFCTIHRSKQVIFFIISVATIMYTPDLMafhn 179
Cdd:cd15095   68 --FGDFMCKFVNYM---MQVTVQATCLTLTA-LSVDRYYAIVHPIRSLRFRTPRVAVVVSACIWIVSFLLSIPVAI---- 137
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 392928093 180 kSHDVFDSKRNRTMKLCyRHRAPFmlklgdDIYYKVMFTTQTVAVHLIPsvLLVIF 235
Cdd:cd15095  138 -YYRLEEGYWYGPQTYC-REVWPS------KAFQKAYMIYTVLLTYVIP--LAIIA 183
7tmA_D3_dopamine_R cd15310
D3 subtype of the D2-like family of dopamine receptors, member of the class A family of ...
51-178 5.69e-04

D3 subtype of the D2-like family of dopamine receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Dopamine receptors are members of the class A G protein-coupled receptors that are involved in many neurological processes in the central nervous system (CNS). The neurotransmitter dopamine is the primary endogenous agonist for dopamine receptors. Dopamine receptors consist of at least five subtypes: D1, D2, D3, D4, and D5. The D1 and D5 subtypes are members of the D1-like family of dopamine receptors, whereas the D2, D3 and D4 subtypes are members of the D2-like family. Activation of D2-like family receptors is linked to G proteins of the G(i) family. This leads to a decrease in adenylate cyclase activity, thereby decreasing cAMP levels. Dopamine receptors are major therapeutic targets for neurological and psychiatric disorders such as drug abuse, depression, schizophrenia, or Parkinson's disease.


Pssm-ID: 320436 [Multi-domain]  Cd Length: 259  Bit Score: 41.88  E-value: 5.69e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392928093  51 VVVLSHKYLRTPTNYVLLAMAVTELLTGLSCLPWFTYYYTLSGYKNdlqtgLPSFWCDMIPYMAAFLPsifhTMAIWLTV 130
Cdd:cd15310   23 MAVLRERALQTTTNYLVVSLAVADLLVATLVMPWVVYLEVTGGVWN-----FSRICCDVFVTLDVMMC----TASILNLC 93
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|.
gi 392928093 131 YLAIQRYIYICVPSLVRKFCTIHRSKQVIFFIISVATIMYT---PDLMAFH 178
Cdd:cd15310   94 AISIDRYTAVVMPVHYQHGTGQSSCRRVSLMITAVWVLAFAvscPLLFGFN 144
7tmA_mAChR_M3 cd15299
muscarinic acetylcholine receptor subtype M3, member of the class A family of ...
27-239 5.77e-04

muscarinic acetylcholine receptor subtype M3, member of the class A family of seven-transmembrane G protein-coupled receptors; Muscarinic acetylcholine receptors (mAChRs) regulate the activity of many fundamental central and peripheral functions. The mAChR family consists of 5 subtypes M1-M5, which can be further divided into two major groups according to their G-protein coupling preference. The M1, M3 and M5 receptors selectively interact with G proteins of the G(q/11) family, whereas the M2 and M4 receptors preferentially link to the G(i/o) types of G proteins. The M3 receptor is mainly located in smooth muscle, exocrine glands and vascular endothelium. It induces vomiting in the central nervous system and is a critical regulator of glucose homeostasis by modulating insulin secretion. Generally, M3 receptor causes contraction of smooth muscle resulting in vasoconstriction and increased glandular secretion. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320426 [Multi-domain]  Cd Length: 274  Bit Score: 41.86  E-value: 5.77e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392928093  27 WAVPMYGYMMPFIVTLTVATNSFIVVVLS-HKYLRTPTNYVLLAMAVTELLTGLSCLPWFTYYYTLSGYkndlqtGLPSF 105
Cdd:cd15299    1 WQVVLIAFLTGILALVTIIGNILVIVSFKvNKQLKTVNNYFLLSLACADLIIGVISMNLFTTYIIMNRW------ALGNL 74
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392928093 106 WCD---MIPYMAAFlPSIFHTMAIWLTVYLAIQRyiyicvPSLVRKFCTIHRSKQVIFFIISVATIMYTPDLMAFHnksh 182
Cdd:cd15299   75 ACDlwlSIDYVASN-ASVMNLLVISFDRYFSITR------PLTYRAKRTTKRAGVMIGLAWVISFVLWAPAILFWQ---- 143
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 392928093 183 dVFDSKRNRTMKLCYrhrAPFmlkLGDDIyykVMFTTQTVAVHLiPSVLLVIFTWKL 239
Cdd:cd15299  144 -YFVGKRTVPPDECF---IQF---LSEPI---ITFGTAIAAFYL-PVTIMTILYWRI 189
7tmA_TACR-like cd15202
tachykinin receptors and related receptors, member of the class A family of ...
38-377 6.41e-04

tachykinin receptors and related receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes the neurokinin/tachykinin receptors and its closely related receptors such as orphan GPR83 and leucokinin-like peptide receptor. The tachykinins are widely distributed throughout the mammalian central and peripheral nervous systems and act as excitatory transmitters on neurons and cells in the gastrointestinal tract. The TKs are characterized by a common five-amino acid C-terminal sequence, Phe-X-Gly-Leu-Met-NH2, where X is a hydrophobic residue. The three major mammalian tachykinins are substance P (SP), neurokinin A (NKA), and neurokinin B (NKB). The physiological actions of tachykinins are mediated through three types of receptors: neurokinin receptor type 1 (NK1R), NK2R, and NK3R. SP is a high-affinity endogenous ligand for NK1R, which interacts with the Gq protein and activates phospholipase C, leading to elevation of intracellular calcium. NK2R is a high-affinity receptor for NKA, the tachykinin neuropeptide substance K. SP and NKA are found in the enteric nervous system and mediate in the regulation of gastrointestinal motility, secretion, vascular permeability, and pain perception. NK3R is activated by its high-affinity ligand, NKB, which is primarily involved in the central nervous system and plays a critical role in the regulation of gonadotropin hormone release and the onset of puberty.


Pssm-ID: 320330 [Multi-domain]  Cd Length: 288  Bit Score: 41.72  E-value: 6.41e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392928093  38 FIVTLTVATNSFIV-VVLSHKYLRTPTNYVLLAMAVTELLTGLSCLPwFTYYYTLSGYkndlqTGLPSFWCDMIPY--MA 114
Cdd:cd15202    9 FIIVFSLFGNVLVCwIIFKNQRMRTVTNYFIVNLAVADIMITLFNTP-FTFVRAVNNT-----WIFGLFMCHFSNFaqYC 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392928093 115 AFLPSIFHTMAIwltvylAIQRYIYICVPSLVRkfCTIHRSKQVIFFIISVATIMYTPDLMAfhnKSHDVFDSKRNRTMK 194
Cdd:cd15202   83 SVHVSAYTLTAI------AVDRYQAIMHPLKPR--ISKTKAKFIIAVIWTLALAFALPHAIC---SKLETFKYSEDIVRS 151
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392928093 195 LCYRhrapfMLKLGDDIYYKVMFTTQTVAVHLIPsVLLVIFTWKLVGairvadrrhanllskystttrsTRRKFSELTNS 274
Cdd:cd15202  152 LCLE-----DWPERADLFWKYYDLALFILQYFLP-LLVISFAYARVG----------------------IKLWASNMPGD 203
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392928093 275 SENEnkitRLFKQRDSVsvgneprrahglKQNTRMLVVVILLFLITEIPaaliFTIHVLSVSLkFSFVDYQFLNILLIVR 354
Cdd:cd15202  204 ATTE----RYFALRRKK------------KKVIKMLMVVVVLFALCWLP----FNIYVLLLSS-KPDYLIKTINAVYFAF 262
                        330       340
                 ....*....|....*....|...
gi 392928093 355 NVLIVVSYPFRFAIYCGMSQQFR 377
Cdd:cd15202  263 HWLAMSSTCYNPFIYCWLNERFR 285
7tmA_AstA_R_insect cd15096
allatostatin-A receptor in insects, member of the class A family of seven-transmembrane G ...
38-169 6.68e-04

allatostatin-A receptor in insects, member of the class A family of seven-transmembrane G protein-coupled receptors; The G protein-coupled AstA receptor binds allatostatin A. Three distinct types of allatostatin have been identified in the insects and crustaceans: AstA, AstB, and AstC. They both inhibit the biosynthesis of juvenile hormone and exert an inhibitory influence on food intake. Therefore, allatostatins are considered as potential targets for insect control.


Pssm-ID: 320224 [Multi-domain]  Cd Length: 284  Bit Score: 41.90  E-value: 6.68e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392928093  38 FIVTLTVATNSF-IVVVLSHKYLRTPTNYVLLAMAVTELLTGLSCLPWFTYYYTLSGYKndlqtgLPSFWCDMIPYMAAF 116
Cdd:cd15096    9 LIFIVGLIGNSLvILVVLSNQQMRSTTNILILNLAVADLLFVVFCVPFTATDYVLPTWP------FGDVWCKIVQYLVYV 82
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|...
gi 392928093 117 lpSIFHTmaIWLTVYLAIQRYIYICVPSlvrKFCTIHRSKQVIFFIISVATIM 169
Cdd:cd15096   83 --TAYAS--VYTLVLMSLDRYLAVVHPI---TSMSIRTERNTLIAIVGIWIVI 128
7tmA_GHSR cd15131
growth hormone secretagogue receptor, member of the class A family of seven-transmembrane G ...
50-172 7.64e-04

growth hormone secretagogue receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; Growth hormone secretagogue receptor, GHSR, is also known as GH-releasing peptide receptor (GHRP) or Ghrelin receptor. Ghrelin, the endogenous ligand for GHSR, is an acylated 28-amino acid peptide hormone produced by ghrelin cells in the gastrointestinal tract. Ghrelin, also called hunger hormone, is involved in the regulation of growth hormone release, appetite and feeding, gut motility, lipid and glucose metabolism, and energy balance. It also plays a role in the cardiovascular, immune, and reproductive systems. GHSR couples to G-alpha-11 proteins. Both ghrelin and GHSR are expressed in a wide range of cancer tissues. Recent studies suggested that ghrelin may play a role in processes associated with cancer progression, including cell proliferation, metastasis, apoptosis, and angiogenesis.


Pssm-ID: 320259 [Multi-domain]  Cd Length: 291  Bit Score: 41.41  E-value: 7.64e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392928093  50 IVVVLSHKYLRTPTNYVLLAMAVTELLTGLsCLPwfTYYYTLSGYKndlqtglPSFWCDMIPYMAAFLPSIFHTMAIWLT 129
Cdd:cd15131   22 MLVVSKYRDMRTTTNLYLSSMAFSDLLIFL-CMP--LDLYRLWQYR-------PWNFGDLLCKLFQFVSESCTYSTILNI 91
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|...
gi 392928093 130 VYLAIQRYIYICVPSLVRKFCTIHRSKQVIFFIISVATIMYTP 172
Cdd:cd15131   92 TALSVERYFAICFPLRAKVVVTKRRVKLVILVLWAVSFLSAGP 134
7tmA_Adenosine_R cd14968
adenosine receptor subfamily, member of the class A family of seven-transmembrane G ...
39-180 8.47e-04

adenosine receptor subfamily, member of the class A family of seven-transmembrane G protein-coupled receptors; The adenosine receptors (or P1 receptors), a family of G protein-coupled purinergic receptors, bind adenosine as their endogenous ligand. There are four types of adenosine receptors in human, designated as A1, A2A, A2B, and A3. Each type is encoded by a different gene and has distinct functions with some overlap. For example, both A1 and A2A receptors are involved in regulating myocardial oxygen consumption and coronary blood flow in the heart, while the A2A receptor also has a broad spectrum of anti-inflammatory effects in the body. These two receptors also expressed in the brain, where they have important roles in the release of other neurotransmitters such as dopamine and glutamate, while the A2B and A3 receptors found primarily in the periphery and play important roles in inflammation and immune responses. The A1 and A3 receptors preferentially interact with G proteins of the G(i/o) family, thereby lowering the intracellular cAMP levels, whereas the A2A and A2B receptors interact with G proteins of the G(s) family, activating adenylate cyclase to elevate cAMP levels.


Pssm-ID: 341316 [Multi-domain]  Cd Length: 285  Bit Score: 41.47  E-value: 8.47e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392928093  39 IVTLTVATNSF-IVVVLSHKYLRTPTNYVLLAMAVTELLTGLSCLPwFTYYYTLsGYKNDLQTGLpsfwcdmipYMAAFL 117
Cdd:cd14968   10 IAVLSVLGNVLvIWAVKLNRALRTVTNYFIVSLAVADILVGALAIP-LAILISL-GLPTNFHGCL---------FMACLV 78
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 392928093 118 -----PSIFHTMAIwltvylAIQRYIYICVPSLVRKFCTIHRSKQVIFFIISVATIMYTPDLMAFHNK 180
Cdd:cd14968   79 lvltqSSIFSLLAI------AIDRYLAIKIPLRYKSLVTGRRAWGAIAVCWVLSFLVGLTPMFGWNNG 140
7tmA_Histamine_H2R cd15051
histamine subtype H2 receptor, member of the class A family of seven-transmembrane G ...
39-134 8.68e-04

histamine subtype H2 receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes histamine receptor subtype H2R, a member of histamine receptor family, which belongs to the class A of GPCRs. Histamine plays a key role as chemical mediator and neurotransmitter in various physiological and pathophysiological processes in the central and peripheral nervous system. Histamine exerts its functions by binding to four different G protein-coupled receptors (H1-H4). The H2R subtype selectively interacts with the G(s)-type G protein that activates adenylate cyclase, leading to increased cAMP production and activation of Protein Kinase A. H2R is found in various tissues such as the brain, stomach, and heart. Its most prominent role is in histamine-induced gastric acid secretion. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320179 [Multi-domain]  Cd Length: 287  Bit Score: 41.55  E-value: 8.68e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392928093  39 IVTLTVATNSFIVV-VLSHKYLRTPTNYVLLAMAVTELLTGLSCLPwFTYYYTLSGYKNdlqtgLPSFWCDMIPYMAAFL 117
Cdd:cd15051   10 IILLTVIGNVLVCLaVAVNRRLRNLTNYFIVSLAVTDLLLGLLVLP-FSAIYELRGEWP-----LGPVFCNIYISLDVML 83
                         90
                 ....*....|....*....
gi 392928093 118 --PSIFHTMAIWLTVYLAI 134
Cdd:cd15051   84 ctASILNLFAISLDRYLAI 102
7tmA_Galanin_R-like cd14971
galanin receptor and related proteins, member of the class A family of seven-transmembrane G ...
27-134 1.37e-03

galanin receptor and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This subfamily includes G-protein coupled galanin receptors, kisspeptin receptor and allatostatin-A receptor (AstA-R) in insects. These receptors, which are members of the class A of seven transmembrane GPCRs, share a high degree of sequence homology among themselves. The galanin receptors bind galanin, a neuropeptide that is widely expressed in the brain, peripheral tissues, and endocrine glands. Galanin is implicated in numerous neurological and psychiatric diseases including Alzheimer's disease, eating disorders, and epilepsy, among many others. KiSS1-derived peptide receptor (also known as GPR54 or kisspeptin receptor) binds the peptide hormone kisspeptin (metastin), which encoded by the metastasis suppressor gene (KISS1) expressed in various endocrine and reproductive tissues. AstA-R is a G-protein coupled receptor that binds allatostatin A. Three distinct types of allatostatin have been identified in the insects and crustaceans: AstA, AstB, and AstC. They both inhibit the biosynthesis of juvenile hormone and exert an inhibitory influence on food intake. Therefore, allatostatins are considered as potential targets for insect control.


Pssm-ID: 320102 [Multi-domain]  Cd Length: 281  Bit Score: 40.91  E-value: 1.37e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392928093  27 WAVPMYGYmmpFIVTLTVATNSFIV-VVLSHKYLRTPTNYVLLAMAVTELLTGLSCLPWFTYYYTLSGYKndlqtgLPSF 105
Cdd:cd14971    1 WIVPLFFA---LIFLLGLVGNSLVIlVVARNKPMRSTTNLFILNLAVADLTFLLFCVPFTATIYPLPGWV------FGDF 71
                         90       100       110
                 ....*....|....*....|....*....|.
gi 392928093 106 WCDMIPYM--AAFLPSIFHTMAIWLTVYLAI 134
Cdd:cd14971   72 MCKFVHYFqqVSMHASIFTLVAMSLDRFLAV 102
7tmA_5-HT2C cd15305
serotonin receptor subtype 2C, member of the class A family of seven-transmembrane G ...
39-138 1.64e-03

serotonin receptor subtype 2C, member of the class A family of seven-transmembrane G protein-coupled receptors; The 5-HT2 receptors are a subfamily of serotonin receptors that bind the neurotransmitter serotonin (5HT; 5-hydroxytryptamine) in the central nervous system (CNS). The 5-HT2 subfamily is composed of three subtypes that mediate excitatory neurotransmission: 5-HT2A, 5-HT2B, and 5-HT2C. They are selectively linked to G proteins of the G(q/11) family and activate phospholipase C, which leads to activation of protein kinase C and calcium release. In the CNS, serotonin is involved in the regulation of appetite, mood, sleep, cognition, learning and memory, as well as implicated in diseases such as migraine, schizophrenia, and depression. Indeed, 5-HT2 receptors are attractive targets for a variety of psychoactive drugs, ranging from atypical antipsychotic drugs, antidepressants, and anxiolytics, which have an antagonistic action on 5-HT2 receptors, to hallucinogens, which act as agonists at postsynaptic 5-HT2 receptors. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 341346 [Multi-domain]  Cd Length: 275  Bit Score: 40.66  E-value: 1.64e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392928093  39 IVTLTVATNSFIVVVLS-HKYLRTPTNYVLLAMAVTELLTGLSCLPwftyyYTLSGYKNDLQTGLPSFWCDMIPYMAAFL 117
Cdd:cd15305   10 IIILTIGGNILVIMAVSlEKKLQNATNFFLMSLAVADMLVGILVMP-----VSLIAILYDYAWPLPRYLCPIWISLDVLF 84
                         90       100
                 ....*....|....*....|...
gi 392928093 118 P--SIFHTMAIWLTVYLAIQRYI 138
Cdd:cd15305   85 StaSIMHLCAISLDRYVAIRNPI 107
7tmA_Pinopsin cd15084
non-visual pinopsins, member of the class A family of seven-transmembrane G protein-coupled ...
35-143 1.67e-03

non-visual pinopsins, member of the class A family of seven-transmembrane G protein-coupled receptors; Pinopsins are found in the pineal organ of birds, reptiles and amphibians, but are absent from teleosts and mammals. The vertebrate non-visual opsin family includes pinopsins, parapinopsin, VA (vertebrate ancient) opsins, and parietopsins. These non-visual opsins are expressed in various extra-retinal tissues and/or in non-rod, non-cone retinal cells. They are thought to be involved in light-dependent physiological functions such as photo-entrainment of circadian rhythm, photoperiodicity and body color change. Pinopsins belong the class A of the G protein-coupled receptors and possess seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops.


Pssm-ID: 320212 [Multi-domain]  Cd Length: 295  Bit Score: 40.62  E-value: 1.67e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392928093  35 MMPFIVTLTVATNSFIVVV-LSHKYLRTPTNYVLLAMAVTELLTglsclpwfTYYYTLSGYKNDLqTGLPSFWCDMIPYm 113
Cdd:cd15084   16 LMGMVVALASFVNGLVIVVsIKYKKLRSPLNYILVNLAVADLLV--------TLFGSSVSFSNNI-VGFFVFGKTMCEF- 85
                         90       100       110
                 ....*....|....*....|....*....|
gi 392928093 114 AAFLPSIFHTMAIWLTVYLAIQRYIYICVP 143
Cdd:cd15084   86 EGFMVSLTGIVGLWSLAILAFERYLVICKP 115
7tmA_Octopamine_R cd15063
octopamine receptors in invertebrates, member of the class A family of seven-transmembrane G ...
38-159 2.44e-03

octopamine receptors in invertebrates, member of the class A family of seven-transmembrane G protein-coupled receptors; G-protein coupled receptor for octopamine (OA), which functions as a neurotransmitter, neurohormone, and neuromodulator in invertebrate nervous system. Octopamine (also known as beta, 4-dihydroxyphenethylamine) is an endogenous trace amine that is highly similar to norepinephrine, but lacks a hydroxyl group, and has effects on the adrenergic and dopaminergic nervous systems. Based on the pharmacological and signaling profiles, the octopamine receptors can be classified into at least two groups: OA1 receptors elevate intracellular calcium levels in muscle, whereas OA2 receptors activate adenylate cyclase and increase cAMP production.


Pssm-ID: 320191 [Multi-domain]  Cd Length: 266  Bit Score: 39.79  E-value: 2.44e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392928093  38 FIVTLTVATNSFIVV-VLSHKYLRTPTNYVLLAMAVTELLTGLSCLP----WFTYYYTLSGYkndlqtglpsFWCDMIPY 112
Cdd:cd15063    9 FLNVLVVLGNLLVIAaVLCSRKLRTVTNLFIVSLACADLLVGTLVLPfsavNEVLDVWIFGH----------TWCQIWLA 78
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*....
gi 392928093 113 MAAFL--PSIFHTMAIWLTVYLAIQRYIYicVPSLVRKFctihRSKQVI 159
Cdd:cd15063   79 VDVWMctASILNLCAISLDRYLAITRPIR--YPSLMSTK----RAKCLI 121
7tmA_NPFFR cd15207
neuropeptide FF receptors, member of the class A family of seven-transmembrane G ...
50-196 3.04e-03

neuropeptide FF receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Neuropeptide FF (NPFF) is a mammalian octapeptide that belongs to a family of neuropeptides containing an RF-amide motif at their C-terminus that have been implicated in a wide range of physiological functions in the brain including pain sensitivity, insulin release, food intake, memory, blood pressure, and opioid-induced tolerance and hyperalgesia. The effects of these peptides are mediated through neuropeptide FF1 and FF2 receptors (NPFF1-R and NPFF2-R) which are predominantly expressed in the brain. NPFF induces pro-nociceptive effects, mainly through the NPFF1-R, and anti-nociceptive effects, mainly through the NPFF2-R. NPFF has been shown to inhibit adenylate cyclase via the Gi protein coupled to NPFF1-R.


Pssm-ID: 320335 [Multi-domain]  Cd Length: 291  Bit Score: 39.53  E-value: 3.04e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392928093  50 IVVVLSHKYLRTPTNYVLLAMAVTELLTGLSCLPwftyyYTLSgykNDLQTGLP--SFWCDMIPYM-----AAflpSIFH 122
Cdd:cd15207   22 CLVVAKNPRMRTVTNYFILNLAVSDLLVGVFCMP-----FTLV---DNILTGWPfgDVMCKLSPLVqgvsvAA---SVFT 90
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 392928093 123 TMAIWLTVYLAIqryIYICVPSLvrkfcTIHRSKQVIFFIISVATIMYTPDLMAFHNKSHDVFdskRNRTMKLC 196
Cdd:cd15207   91 LVAIAVDRYRAV---VHPTEPKL-----TNRQAFVIIVAIWVLALAIMIPQALVLEVKEYQFF---RGQTVHIC 153
7tmA_motilin_R cd15132
motilin receptor, member of the class A family of seven-transmembrane G protein-coupled ...
50-377 4.63e-03

motilin receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; Motilin receptor, also known as GPR38, is a G-protein coupled receptor that binds the endogenous ligand motilin. Motilin is a 22 amino acid peptide hormone expressed throughout the gastrointestinal tract and stimulates contraction of gut smooth muscle. Motilin is also called as the housekeeper of the gut because it is responsible for the proper filling and emptying of the gastrointestinal tract in response to food intake, and for stimulating the production of pepsin. Motilin receptor shares significant amino acid sequence identity with the growth hormone secretagogue receptor (GHSR) and neurotensin receptors (NTS-R1 and 2).


Pssm-ID: 320260 [Multi-domain]  Cd Length: 289  Bit Score: 39.01  E-value: 4.63e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392928093  50 IVVVLSHKYLRTPTNYVLLAMAVTELLTgLSCLPWFTYyytlsgyknDLQTGLP----SFWCDMIPYM--AAFLPSIFHT 123
Cdd:cd15132   22 VLIIRRYKDMRTTTNLYLSSMAVSDLLI-LLCLPFDLY---------RLWKSRPwifgEFLCRLYHYIseGCTYATILHI 91
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392928093 124 MAiwltvyLAIQRYIYICVPSLVRKFCTIHRSKQVIFFIISVATIMYTPDL----MAFHNKSHDVFDSKRNRtmklcyrh 199
Cdd:cd15132   92 TA------LSIERYLAICFPLRAKVLVTRRRVKCVIAALWAFALLSAGPFLflvgVEQDNNIHPDDFSRECK-------- 157
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392928093 200 RAPFMLKLGddiYYKVMFTTQTvAVHLIPsVLLVIFTWKLVGairvadrrhanllskystttrstrrkfseltnssenen 279
Cdd:cd15132  158 HTPYAVSSG---LLGIMIWVTT-TYFFLP-MLCLSFLYGFIG-------------------------------------- 194
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392928093 280 kiTRLFKQRDSVSVGNEPRRAHGLKQNTRMLVVVILLFLITEIP---AALIFTIHVLSVSLKFSfvdyQFLNILLIvrnV 356
Cdd:cd15132  195 --RKLWKSKNDLRGPNAAARERSHRQTVRILAVVVLAFIICWLPfhiGRILFANTEDYRTMMFS----QYFNIVAM---Q 265
                        330       340
                 ....*....|....*....|.
gi 392928093 357 LIVVSYPFRFAIYCGMSQQFR 377
Cdd:cd15132  266 LFYLSASINPILYNLISRKYR 286
7tmA_VA_opsin cd15082
non-visual VA (vertebrate ancient) opsins, member of the class A family of seven-transmembrane ...
27-143 5.18e-03

non-visual VA (vertebrate ancient) opsins, member of the class A family of seven-transmembrane G protein-coupled receptors; The vertebrate ancient (VA) opsin photopigments were originally identified in salmon and they appear to have diverged early in the evolution of vertebrate opsins. VA opsins are localized in the inner retina and the brain in teleosts. The vertebrate non-visual opsin family includes pinopsins, parapinopsin, VA (vertebrate ancient) opsins, and parietopsins. These non-visual opsins are expressed in various extraretinal tissues and/or in non-rod, non-cone retinal cells. They are thought to be involved in light-dependent physiological functions such as photo-entrainment of circadian rhythm, photoperiodicity, and body color change. The VA opsins belong the class A of the G protein-coupled receptors and possess seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops.


Pssm-ID: 320210 [Multi-domain]  Cd Length: 291  Bit Score: 39.01  E-value: 5.18e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392928093  27 WAVPMYGYMMpFIVTLTVATNSFIVVVLSHKY--LRTPTNYVLLAMAVTELLTGLS--CLPWFT----YYYtlsgykndl 98
Cdd:cd15082   11 WNFTVLAALM-FVVTSLSLAENFAVMLVTFRFkqLRQPLNYIIVNLSVADFLVSLTggTISFLTnargYFF--------- 80
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*
gi 392928093  99 qtgLPSFWCdmipYMAAFLPSIFHTMAIWLTVYLAIQRYIYICVP 143
Cdd:cd15082   81 ---LGVWAC----VLEGFAVTFFGIVALWSLAVLAFERFFVICRP 118
7tmA_Opioid_R-like cd14970
opioid receptors and related proteins, member of the class A family of seven-transmembrane G ...
34-172 7.93e-03

opioid receptors and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes opioid receptors, somatostatin receptors, melanin-concentrating hormone receptors (MCHRs), and neuropeptides B/W receptors. Together they constitute the opioid receptor-like family, members of the class A G-protein coupled receptors. Opioid receptors are coupled to inhibitory G proteins of the G(i/o) family and are involved in regulating a variety of physiological functions such as pain, addiction, mood, stress, epileptic seizure, and obesity, among many others. G protein-coupled somatostatin receptors (SSTRs), which display strong sequence similarity with opioid receptors, binds somatostatin (somatotropin release inhibiting factor), a polypeptide hormone that regulates a wide variety of physiological functions such as neurotransmission, cell proliferation, contractility of smooth muscle cells, and endocrine signaling as well as inhibition of the release of many secondary hormones. MCHR binds melanin concentrating hormone and is presumably involved in the neuronal regulation of food intake. Despite strong homology with somatostatin receptors, MCHR does not appear to bind somatostatin. Neuropeptides B/W receptors are primarily expressed in the CNS and stimulate the cortisol secretion by activating the adenylate cyclase- and the phospholipase C-dependent signaling pathways.


Pssm-ID: 320101 [Multi-domain]  Cd Length: 282  Bit Score: 38.43  E-value: 7.93e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392928093  34 YMMPFIVTLTvaTNSF-IVVVLSHKYLRTPTNYVLLAMAVTELLTgLSCLPWFTYYYTLSGYKndlqtgLPSFWCDMIPY 112
Cdd:cd14970    7 YSVVCVVGLT--GNSLvIYVILRYSKMKTVTNIYILNLAVADELF-LLGLPFLATSYLLGYWP------FGEVMCKIVLS 77
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 392928093 113 MAAFlpSIFhTMAIWLTVyLAIQRYIYICVPSLVRKFCTIHRSKQVIFFIISVATIMYTP 172
Cdd:cd14970   78 VDAY--NMF-TSIFCLTV-MSVDRYLAVVHPVKSLRFRTPRKAKLVSLCVWALSLVLGLP 133
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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