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Conserved domains on  [gi|193210341|ref|NP_508199|]
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Ovule protein [Caenorhabditis elegans]

Protein Classification

calponin repeat domain-containing protein( domain architecture ID 10449811)

calponin repeat domain-containing protein similar to Caenorhabditis elegans uncharacterized protein C53C9.2

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
Calponin pfam00402
Calponin family repeat;
25-47 6.87e-05

Calponin family repeat;


:

Pssm-ID: 459803  Cd Length: 25  Bit Score: 37.50  E-value: 6.87e-05
                          10        20
                  ....*....|....*....|...
gi 193210341   25 ISWEYGSNKFASQKGQPAFGTNR 47
Cdd:pfam00402   1 IGLQMGTNKGASQSGMTAFGAVR 23
 
Name Accession Description Interval E-value
Calponin pfam00402
Calponin family repeat;
25-47 6.87e-05

Calponin family repeat;


Pssm-ID: 459803  Cd Length: 25  Bit Score: 37.50  E-value: 6.87e-05
                          10        20
                  ....*....|....*....|...
gi 193210341   25 ISWEYGSNKFASQKGQPAFGTNR 47
Cdd:pfam00402   1 IGLQMGTNKGASQSGMTAFGAVR 23
 
Name Accession Description Interval E-value
Calponin pfam00402
Calponin family repeat;
25-47 6.87e-05

Calponin family repeat;


Pssm-ID: 459803  Cd Length: 25  Bit Score: 37.50  E-value: 6.87e-05
                          10        20
                  ....*....|....*....|...
gi 193210341   25 ISWEYGSNKFASQKGQPAFGTNR 47
Cdd:pfam00402   1 IGLQMGTNKGASQSGMTAFGAVR 23
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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