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Conserved domains on  [gi|17564520|ref|NP_505713|]
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Enhancer of rudimentary homolog [Caenorhabditis elegans]

Protein Classification

ER domain-containing protein( domain architecture ID 10471567)

ER domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ER pfam01133
Enhancer of rudimentary; Enhancer of rudimentary is a protein of unknown function that is ...
 2-98 1.65e-49

Enhancer of rudimentary; Enhancer of rudimentary is a protein of unknown function that is highly conserved in plants and animals. This protein is found to be an enhancer of the rudimentary gene.


:

Pssm-ID: 460078  Cd Length: 98  Bit Score: 151.95  E-value: 1.65e-49
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17564520     2 SHTILLLQPTDNIESRSWSDYENTTECLEGICRVYEEYLKKKVPAQNEITYDISHLFEFIDDLKDLSMLVLDNTTYTYVP 81
Cdd:pfam01133   1 SHTILLVQPSKNPESRTYSDYESVNQAMEGVCKIYEEHLKEKNPNLPTITYDISDLFDFIDSLADLSCLVYQKSTNTYAP 80

                          90
                  ....*....|....*..
gi 17564520    82 HNKQYVKESIYKLMNNR 98
Cdd:pfam01133  81 HDKEWIKEKIYELLRKQ 97
 
Name Accession Description Interval E-value
ER pfam01133
Enhancer of rudimentary; Enhancer of rudimentary is a protein of unknown function that is ...
 2-98 1.65e-49

Enhancer of rudimentary; Enhancer of rudimentary is a protein of unknown function that is highly conserved in plants and animals. This protein is found to be an enhancer of the rudimentary gene.


Pssm-ID: 460078  Cd Length: 98  Bit Score: 151.95  E-value: 1.65e-49
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17564520     2 SHTILLLQPTDNIESRSWSDYENTTECLEGICRVYEEYLKKKVPAQNEITYDISHLFEFIDDLKDLSMLVLDNTTYTYVP 81
Cdd:pfam01133   1 SHTILLVQPSKNPESRTYSDYESVNQAMEGVCKIYEEHLKEKNPNLPTITYDISDLFDFIDSLADLSCLVYQKSTNTYAP 80

                          90
                  ....*....|....*..
gi 17564520    82 HNKQYVKESIYKLMNNR 98
Cdd:pfam01133  81 HDKEWIKEKIYELLRKQ 97
 
Name Accession Description Interval E-value
ER pfam01133
Enhancer of rudimentary; Enhancer of rudimentary is a protein of unknown function that is ...
 2-98 1.65e-49

Enhancer of rudimentary; Enhancer of rudimentary is a protein of unknown function that is highly conserved in plants and animals. This protein is found to be an enhancer of the rudimentary gene.


Pssm-ID: 460078  Cd Length: 98  Bit Score: 151.95  E-value: 1.65e-49
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17564520     2 SHTILLLQPTDNIESRSWSDYENTTECLEGICRVYEEYLKKKVPAQNEITYDISHLFEFIDDLKDLSMLVLDNTTYTYVP 81
Cdd:pfam01133   1 SHTILLVQPSKNPESRTYSDYESVNQAMEGVCKIYEEHLKEKNPNLPTITYDISDLFDFIDSLADLSCLVYQKSTNTYAP 80

                          90
                  ....*....|....*..
gi 17564520    82 HNKQYVKESIYKLMNNR 98
Cdd:pfam01133  81 HDKEWIKEKIYELLRKQ 97
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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