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Conserved domains on  [gi|17559338|ref|NP_504978|]
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ShKT domain-containing protein [Caenorhabditis elegans]

Protein Classification

ShKT domain-containing protein( domain architecture ID 10480162)

ShKT (ShK toxin) domain-containing protein similar to Toxocara canis surface coat glycoprotein TES-120 precursor

CATH:  1.10.10.740
SCOP:  3000917
TCDB:  8.B.14

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ShK pfam01549
ShK domain-like; This domain of is found in several C. elegans proteins. The domain is 30 ...
 124-157 8.84e-05

ShK domain-like; This domain of is found in several C. elegans proteins. The domain is 30 amino acids long and rich in cysteine residues. There are 6 conserved cysteine positions in the domain that form three disulphide bridges. The domain is found in the potassium channel inhibitor ShK in sea anemone.


:

Pssm-ID: 426319  Cd Length: 37  Bit Score: 38.91  E-value: 8.84e-05
                          10        20        30
                  ....*....|....*....|....*....|....
gi 17559338   124 FPRLNCASITKTQCNSIAWRTIIAQDCPASCGFC 157
Cdd:pfam01549   4 DPHSDCASWAALGCTSPFYQDFMKENCPKTCGFC 37
ShK pfam01549
ShK domain-like; This domain of is found in several C. elegans proteins. The domain is 30 ...
 161-196 2.55e-03

ShK domain-like; This domain of is found in several C. elegans proteins. The domain is 30 amino acids long and rich in cysteine residues. There are 6 conserved cysteine positions in the domain that form three disulphide bridges. The domain is found in the potassium channel inhibitor ShK in sea anemone.


:

Pssm-ID: 426319  Cd Length: 37  Bit Score: 34.68  E-value: 2.55e-03
                          10        20        30
                  ....*....|....*....|....*....|....*..
gi 17559338   161 GCVDAVTDCANDVSI-CNVVGLQDFVNQYCQKTCARC 196
Cdd:pfam01549   1 SCVDPHSDCASWAALgCTSPFYQDFMKENCPKTCGFC 37
 
Name Accession Description Interval E-value
ShK pfam01549
ShK domain-like; This domain of is found in several C. elegans proteins. The domain is 30 ...
 124-157 8.84e-05

ShK domain-like; This domain of is found in several C. elegans proteins. The domain is 30 amino acids long and rich in cysteine residues. There are 6 conserved cysteine positions in the domain that form three disulphide bridges. The domain is found in the potassium channel inhibitor ShK in sea anemone.


Pssm-ID: 426319  Cd Length: 37  Bit Score: 38.91  E-value: 8.84e-05
                          10        20        30
                  ....*....|....*....|....*....|....
gi 17559338   124 FPRLNCASITKTQCNSIAWRTIIAQDCPASCGFC 157
Cdd:pfam01549   4 DPHSDCASWAALGCTSPFYQDFMKENCPKTCGFC 37
ShK pfam01549
ShK domain-like; This domain of is found in several C. elegans proteins. The domain is 30 ...
 161-196 2.55e-03

ShK domain-like; This domain of is found in several C. elegans proteins. The domain is 30 amino acids long and rich in cysteine residues. There are 6 conserved cysteine positions in the domain that form three disulphide bridges. The domain is found in the potassium channel inhibitor ShK in sea anemone.


Pssm-ID: 426319  Cd Length: 37  Bit Score: 34.68  E-value: 2.55e-03
                          10        20        30
                  ....*....|....*....|....*....|....*..
gi 17559338   161 GCVDAVTDCANDVSI-CNVVGLQDFVNQYCQKTCARC 196
Cdd:pfam01549   1 SCVDPHSDCASWAALgCTSPFYQDFMKENCPKTCGFC 37
 
Name Accession Description Interval E-value
ShK pfam01549
ShK domain-like; This domain of is found in several C. elegans proteins. The domain is 30 ...
 124-157 8.84e-05

ShK domain-like; This domain of is found in several C. elegans proteins. The domain is 30 amino acids long and rich in cysteine residues. There are 6 conserved cysteine positions in the domain that form three disulphide bridges. The domain is found in the potassium channel inhibitor ShK in sea anemone.


Pssm-ID: 426319  Cd Length: 37  Bit Score: 38.91  E-value: 8.84e-05
                          10        20        30
                  ....*....|....*....|....*....|....
gi 17559338   124 FPRLNCASITKTQCNSIAWRTIIAQDCPASCGFC 157
Cdd:pfam01549   4 DPHSDCASWAALGCTSPFYQDFMKENCPKTCGFC 37
ShK pfam01549
ShK domain-like; This domain of is found in several C. elegans proteins. The domain is 30 ...
 161-196 2.55e-03

ShK domain-like; This domain of is found in several C. elegans proteins. The domain is 30 amino acids long and rich in cysteine residues. There are 6 conserved cysteine positions in the domain that form three disulphide bridges. The domain is found in the potassium channel inhibitor ShK in sea anemone.


Pssm-ID: 426319  Cd Length: 37  Bit Score: 34.68  E-value: 2.55e-03
                          10        20        30
                  ....*....|....*....|....*....|....*..
gi 17559338   161 GCVDAVTDCANDVSI-CNVVGLQDFVNQYCQKTCARC 196
Cdd:pfam01549   1 SCVDPHSDCASWAALgCTSPFYQDFMKENCPKTCGFC 37
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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