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Conserved domains on  [gi|392891661|ref|NP_496374|]
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FHA domain-containing protein [Caenorhabditis elegans]

Protein Classification

FHA domain-containing protein( domain architecture ID 10044413)

FHA (forkhead-associated) domain-containing protein participates in signal transduction pathways via protein-protein interactions involving recognition of pThr and pTyr phosphopeptides

Gene Ontology:  GO:0051219
PubMed:  10518219|11069759
SCOP:  4002605

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
FHA cd00060
forkhead associated (FHA) domain superfamily; Forkhead-associated (FHA) domains are small ...
8-101 1.49e-09

forkhead associated (FHA) domain superfamily; Forkhead-associated (FHA) domains are small phosphopeptide recognition modules mostly found in eubacteria and eukaryotes. It is about 95-120 residues long that fold into an 11-stranded beta-sandwich. FHA domains can mediate the recognition of phosphorylated and non-phosphorylated substrates, as well as protein oligomerization. They specifically recognize threonine phosphorylation (pThr) accompanying activation of protein serine/threonine kinases. FHA domains show diverse ligand specificity. They may recognize the pTXXD motif, the pTXXI/L motif, and TQ clusters (singly and multiply phosphorylated). In eukaryotes, FHA superfamily members include forkhead-type transcription factors, as well as other signaling proteins, such as many regulatory proteins, kinases, phosphatases, motor proteins called kinesins, and metabolic enzymes. Many of them localize to the nucleus, where they participate in establishing or maintaining cell cycle checkpoints, DNA repair, or transcriptional regulation. FHA domains play important roles in human diseases, particularly in relation to DNA damage responses and cancers. In bacteria, FHA domain-containing proteins may participate in injection of viral proteins into host cells, transmembrane transporters, and cell division. FHA domain-containing proteins rarely include more than one copy of the domain. The only exception in eukaryotes is the checkpoint kinase Rad53 from Saccharomyces cerevisiae, which harbors two FHA domains (FHA1 and FHA2) flanking a central kinase domain. The two FHA domains recognize different phosphorylated targets and function independently from one another. In contrast, Mycobacterium tuberculosis ABC transporter Rv1747 contains two FHA domains but only one of them is essential for protein function.


:

Pssm-ID: 438714 [Multi-domain]  Cd Length: 92  Bit Score: 54.59  E-value: 1.49e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392891661   8 IKNSSGEEVYVLKEKgsVVNFGREKKVCHITFDPHaarVSRIHASIEWGDEGLFFTD-KSKEGTEINGTRLKQsSQELHE 86
Cdd:cd00060    5 LDGDGGGREFPLTKG--VVTIGRSPDCDIVLDDPS---VSRRHARIEVDGGGVYLEDlGSTNGTFVNGKRITP-PVPLQD 78
                         90
                 ....*....|....*
gi 392891661  87 GvYQLAIGGISMTLE 101
Cdd:cd00060   79 G-DVIRLGDTTFRFE 92
PLN03115 super family cl33637
ferredoxin--NADP(+) reductase; Provisional
184-252 2.48e-04

ferredoxin--NADP(+) reductase; Provisional


The actual alignment was detected with superfamily member PLN03115:

Pssm-ID: 215585 [Multi-domain]  Cd Length: 367  Bit Score: 42.68  E-value: 2.48e-04
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 392891661 184 RPRGKRGPISYRPRMNFddemenrGSRGPRARkADKSGVFDEEAPAKKAKIAPQASQSLIKNFFRPKAP 252
Cdd:PLN03115  30 RIRLKKGPLYYRNNVSS-------GKRVVSIR-AQVTTETTTEAPAKVVKVSKKNEEGVVVNKFRPKEP 90
 
Name Accession Description Interval E-value
FHA cd00060
forkhead associated (FHA) domain superfamily; Forkhead-associated (FHA) domains are small ...
8-101 1.49e-09

forkhead associated (FHA) domain superfamily; Forkhead-associated (FHA) domains are small phosphopeptide recognition modules mostly found in eubacteria and eukaryotes. It is about 95-120 residues long that fold into an 11-stranded beta-sandwich. FHA domains can mediate the recognition of phosphorylated and non-phosphorylated substrates, as well as protein oligomerization. They specifically recognize threonine phosphorylation (pThr) accompanying activation of protein serine/threonine kinases. FHA domains show diverse ligand specificity. They may recognize the pTXXD motif, the pTXXI/L motif, and TQ clusters (singly and multiply phosphorylated). In eukaryotes, FHA superfamily members include forkhead-type transcription factors, as well as other signaling proteins, such as many regulatory proteins, kinases, phosphatases, motor proteins called kinesins, and metabolic enzymes. Many of them localize to the nucleus, where they participate in establishing or maintaining cell cycle checkpoints, DNA repair, or transcriptional regulation. FHA domains play important roles in human diseases, particularly in relation to DNA damage responses and cancers. In bacteria, FHA domain-containing proteins may participate in injection of viral proteins into host cells, transmembrane transporters, and cell division. FHA domain-containing proteins rarely include more than one copy of the domain. The only exception in eukaryotes is the checkpoint kinase Rad53 from Saccharomyces cerevisiae, which harbors two FHA domains (FHA1 and FHA2) flanking a central kinase domain. The two FHA domains recognize different phosphorylated targets and function independently from one another. In contrast, Mycobacterium tuberculosis ABC transporter Rv1747 contains two FHA domains but only one of them is essential for protein function.


Pssm-ID: 438714 [Multi-domain]  Cd Length: 92  Bit Score: 54.59  E-value: 1.49e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392891661   8 IKNSSGEEVYVLKEKgsVVNFGREKKVCHITFDPHaarVSRIHASIEWGDEGLFFTD-KSKEGTEINGTRLKQsSQELHE 86
Cdd:cd00060    5 LDGDGGGREFPLTKG--VVTIGRSPDCDIVLDDPS---VSRRHARIEVDGGGVYLEDlGSTNGTFVNGKRITP-PVPLQD 78
                         90
                 ....*....|....*
gi 392891661  87 GvYQLAIGGISMTLE 101
Cdd:cd00060   79 G-DVIRLGDTTFRFE 92
FHA COG1716
Forkhead associated (FHA) domain, binds pSer, pThr, pTyr [Signal transduction mechanisms];
23-102 8.12e-09

Forkhead associated (FHA) domain, binds pSer, pThr, pTyr [Signal transduction mechanisms];


Pssm-ID: 441322 [Multi-domain]  Cd Length: 96  Bit Score: 52.27  E-value: 8.12e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392891661  23 GSVVNFGREKKvCHITFDphAARVSRIHASIEWGDEGLFFTD-KSKEGTEINGTRLKQsSQELHEGVyQLAIGGISMTLE 101
Cdd:COG1716   20 GGPLTIGRAPD-NDIVLD--DPTVSRRHARIRRDGGGWVLEDlGSTNGTFVNGQRVTE-PAPLRDGD-VIRLGKTELRFR 94

                 .
gi 392891661 102 V 102
Cdd:COG1716   95 L 95
FHA pfam00498
FHA domain; The FHA (Forkhead-associated) domain is a phosphopeptide binding motif.
26-87 8.16e-09

FHA domain; The FHA (Forkhead-associated) domain is a phosphopeptide binding motif.


Pssm-ID: 459831 [Multi-domain]  Cd Length: 66  Bit Score: 51.42  E-value: 8.16e-09
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 392891661   26 VNFGREKKvCHITFDphAARVSRIHASIEWGDEGLFF-TD-KSKEGTEINGTRLKQSSQELHEG 87
Cdd:pfam00498   1 VTIGRSPD-CDIVLD--DPSVSRRHAEIRYDGGGRFYlEDlGSTNGTFVNGQRLGPEPVRLKDG 61
PLN03115 PLN03115
ferredoxin--NADP(+) reductase; Provisional
184-252 2.48e-04

ferredoxin--NADP(+) reductase; Provisional


Pssm-ID: 215585 [Multi-domain]  Cd Length: 367  Bit Score: 42.68  E-value: 2.48e-04
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 392891661 184 RPRGKRGPISYRPRMNFddemenrGSRGPRARkADKSGVFDEEAPAKKAKIAPQASQSLIKNFFRPKAP 252
Cdd:PLN03115  30 RIRLKKGPLYYRNNVSS-------GKRVVSIR-AQVTTETTTEAPAKVVKVSKKNEEGVVVNKFRPKEP 90
FHA smart00240
Forkhead associated domain; Found in eukaryotic and prokaryotic proteins. Putative nuclear ...
28-77 2.87e-04

Forkhead associated domain; Found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain.


Pssm-ID: 214578 [Multi-domain]  Cd Length: 52  Bit Score: 38.31  E-value: 2.87e-04
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|..
gi 392891661    28 FGREKKVCHITFDPHaaRVSRIHASIEWGDEGLFFT--DKSKEGTEINGTRL 77
Cdd:smart00240   3 IGRSSEDCDIQLDGP--SISRRHAVIVYDGGGRFYLidLGSTNGTFVNGKRI 52
 
Name Accession Description Interval E-value
FHA cd00060
forkhead associated (FHA) domain superfamily; Forkhead-associated (FHA) domains are small ...
8-101 1.49e-09

forkhead associated (FHA) domain superfamily; Forkhead-associated (FHA) domains are small phosphopeptide recognition modules mostly found in eubacteria and eukaryotes. It is about 95-120 residues long that fold into an 11-stranded beta-sandwich. FHA domains can mediate the recognition of phosphorylated and non-phosphorylated substrates, as well as protein oligomerization. They specifically recognize threonine phosphorylation (pThr) accompanying activation of protein serine/threonine kinases. FHA domains show diverse ligand specificity. They may recognize the pTXXD motif, the pTXXI/L motif, and TQ clusters (singly and multiply phosphorylated). In eukaryotes, FHA superfamily members include forkhead-type transcription factors, as well as other signaling proteins, such as many regulatory proteins, kinases, phosphatases, motor proteins called kinesins, and metabolic enzymes. Many of them localize to the nucleus, where they participate in establishing or maintaining cell cycle checkpoints, DNA repair, or transcriptional regulation. FHA domains play important roles in human diseases, particularly in relation to DNA damage responses and cancers. In bacteria, FHA domain-containing proteins may participate in injection of viral proteins into host cells, transmembrane transporters, and cell division. FHA domain-containing proteins rarely include more than one copy of the domain. The only exception in eukaryotes is the checkpoint kinase Rad53 from Saccharomyces cerevisiae, which harbors two FHA domains (FHA1 and FHA2) flanking a central kinase domain. The two FHA domains recognize different phosphorylated targets and function independently from one another. In contrast, Mycobacterium tuberculosis ABC transporter Rv1747 contains two FHA domains but only one of them is essential for protein function.


Pssm-ID: 438714 [Multi-domain]  Cd Length: 92  Bit Score: 54.59  E-value: 1.49e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392891661   8 IKNSSGEEVYVLKEKgsVVNFGREKKVCHITFDPHaarVSRIHASIEWGDEGLFFTD-KSKEGTEINGTRLKQsSQELHE 86
Cdd:cd00060    5 LDGDGGGREFPLTKG--VVTIGRSPDCDIVLDDPS---VSRRHARIEVDGGGVYLEDlGSTNGTFVNGKRITP-PVPLQD 78
                         90
                 ....*....|....*
gi 392891661  87 GvYQLAIGGISMTLE 101
Cdd:cd00060   79 G-DVIRLGDTTFRFE 92
FHA COG1716
Forkhead associated (FHA) domain, binds pSer, pThr, pTyr [Signal transduction mechanisms];
23-102 8.12e-09

Forkhead associated (FHA) domain, binds pSer, pThr, pTyr [Signal transduction mechanisms];


Pssm-ID: 441322 [Multi-domain]  Cd Length: 96  Bit Score: 52.27  E-value: 8.12e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392891661  23 GSVVNFGREKKvCHITFDphAARVSRIHASIEWGDEGLFFTD-KSKEGTEINGTRLKQsSQELHEGVyQLAIGGISMTLE 101
Cdd:COG1716   20 GGPLTIGRAPD-NDIVLD--DPTVSRRHARIRRDGGGWVLEDlGSTNGTFVNGQRVTE-PAPLRDGD-VIRLGKTELRFR 94

                 .
gi 392891661 102 V 102
Cdd:COG1716   95 L 95
FHA pfam00498
FHA domain; The FHA (Forkhead-associated) domain is a phosphopeptide binding motif.
26-87 8.16e-09

FHA domain; The FHA (Forkhead-associated) domain is a phosphopeptide binding motif.


Pssm-ID: 459831 [Multi-domain]  Cd Length: 66  Bit Score: 51.42  E-value: 8.16e-09
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 392891661   26 VNFGREKKvCHITFDphAARVSRIHASIEWGDEGLFF-TD-KSKEGTEINGTRLKQSSQELHEG 87
Cdd:pfam00498   1 VTIGRSPD-CDIVLD--DPSVSRRHAEIRYDGGGRFYlEDlGSTNGTFVNGQRLGPEPVRLKDG 61
COG3456 COG3456
Predicted component of the type VI protein secretion system, contains a FHA domain [Signal ...
35-121 8.69e-07

Predicted component of the type VI protein secretion system, contains a FHA domain [Signal transduction mechanisms, Intracellular trafficking, secretion, and vesicular transport];


Pssm-ID: 442679 [Multi-domain]  Cd Length: 402  Bit Score: 50.53  E-value: 8.69e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392891661  35 CHITFDPHAARVSRIHASIEWGDEGLFFTDKSKEGTEING--TRL-KQSSQELHEGVyQLAIGGISMTLEVDGDELEE-- 109
Cdd:COG3456   36 CDWVLPDPDRSVSRRHAEIRFRDGAFCLTDLSTNGTFLNGsdHPLgPGRPVRLRDGD-RLRIGDYEIRVEISGEDEGAdd 114
                         90
                 ....*....|..
gi 392891661 110 TVIDSPQPDESS 121
Cdd:COG3456  115 PLAAAPEPAVSS 126
FHA_TCF19 cd22685
forkhead associated (FHA) domain found in transcription factor 19 (TCF-19) and similar ...
4-87 3.71e-06

forkhead associated (FHA) domain found in transcription factor 19 (TCF-19) and similar proteins; TCF-19, also called transcription factor SC1, was identified as a putative trans-activating factor with expression beginning at the late G1-S boundary in dividing cells. It also functions as a novel islet factor necessary for proliferation and survival in the INS-1 beta cell line. It plays an important role in susceptibility to both Type 1 Diabetes Mellitus (T1DM) and Type 2 Diabetes Mellitus (T2DM); it has been suggested that it may positively impact beta cell mass under conditions of beta cell stress and increased insulin demand. TCF-19 contains an N-terminal fork head association domain (FHA), a proline rich region, and a C-terminal plant homeodomain (PHD) finger. The FHA domain may serve as a nuclear signaling domain or as a phosphoprotein binding domain. The proline rich region is a common characteristic of trans-activating factors. The PHD finger may allow TCF-19 to interact with chromatin via methylated histone H3.


Pssm-ID: 438737 [Multi-domain]  Cd Length: 130  Bit Score: 45.87  E-value: 3.71e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392891661   4 NGIKIKNSSGEEVYVLKEKGSVVNFGREKKVCHITFDP--HAARVSRIHASI-----EWGDEGLFFTDKSKEGTEINGTR 76
Cdd:cd22685    8 IGLSASRSEPRDLYTFRPDLCEYRIGRNPEVCDVFLCSsqHPNLISREHAEIhaerdGNGNWKVLIEDRSTNGTYVNDVR 87
                         90
                 ....*....|..
gi 392891661  77 LKQ-SSQELHEG 87
Cdd:cd22685   88 LQDgQRRELSDG 99
FHA_NBN cd22667
forkhead associated (FHA) domain found in nibrin and similar proteins; Nibrin (NBN), also ...
6-101 4.31e-06

forkhead associated (FHA) domain found in nibrin and similar proteins; Nibrin (NBN), also called cell cycle regulatory protein p95, or Nijmegen breakage syndrome protein 1 (NBS1), is a novel DNA double-strand break repair protein that is mutated in Nijmegen breakage syndrome. It is a component of the MRE11-RAD50-NBN (MRN complex) which plays a critical role in the cellular response to DNA damage and the maintenance of chromosome integrity. Nibrin modulates the DNA damage signal sensing by recruiting PI3/PI4-kinase family members ATM, ATR, and probably DNA-dependent protein kinase catalytic subunit (DNA-PKcs) to the DNA damage sites and activating their functions. It can also recruit MRE11 and RAD50 to the proximity of DSBs by an interaction with the histone H2AX. Nibrin also functions in telomere length maintenance by generating the 3' overhang which serves as a primer for telomerase dependent telomere elongation. Nibrin is a major player in the control of intra-S-phase checkpoint. This subfamily also includes Schizosaccharomyces pombe DNA repair and telomere maintenance protein Nbs1 and Arabidopsis thaliana AtNbs1. SpNbs1 is an FHA domain-containing protein required for DNA damage repair and S-phase DNA damage checkpoint. It is involved in telomere length maintenance and maintenance of chromatin structure. AtNbs1 is a component of MRN complex. It also functions in the very early stages of meiosis. The FHA domain is a small phosphopeptide recognition module.


Pssm-ID: 438719 [Multi-domain]  Cd Length: 108  Bit Score: 45.01  E-value: 4.31e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392891661   6 IKIKNSSGEEVYVLKEKGSVVnFGRekKVCHITFDpHAARVSRIHASIEWGDEG-----------LFFTDKSKEGTEING 74
Cdd:cd22667    3 LLSEQDGAGTSYYLLPGGEYT-VGR--KDCDIIIV-DDSSISRKHATLTVLHPEanlsdpdtrpeLTLKDLSKYGTFVNG 78
                         90       100
                 ....*....|....*....|....*....
gi 392891661  75 TRLKQ-SSQELHEG-VYQLAIGGISMTLE 101
Cdd:cd22667   79 EKLKGgSEVTLKDGdVITFGVLGSKFRVE 107
FHA_TIFA-like cd22664
forkhead associated (FHA) domain found in the family of TRAF-interacting protein with FHA ...
25-106 2.14e-04

forkhead associated (FHA) domain found in the family of TRAF-interacting protein with FHA domain-containing protein A (TIFA); The TIFA family includes TIFA and TIFA-like protein, TIFAB. TIFA, also called putative MAPK-activating protein PM14, putative NF-kappa-B-activating protein 20, or TRAF2-binding protein (T2BP), is an adapter molecule that plays a key role in the activation of proinflammatory NF-kappa-B signaling following detection of bacterial pathogen-associated molecular pattern metabolites (PAMPs). It promotes activation of an innate immune response by inducing the oligomerization and polyubiquitination of TRAF6, which leads to the activation of TAK1 and IKK through a proteasome-independent mechanism. TIFA-dependent innate immune response is triggered by ADP-D-glycero-beta-D-manno-heptose (ADP-heptose), a potent PAMP present in all Gram-negative and some Gram-positive bacteria: ADP-heptose is recognized by ALPK1, which phosphorylates TIFA at Thr-9, leading to TIFA homooligomerization and subsequent activation of proinflammatory NF-kappa-B signaling. TIFAB, also called TIFA-like protein, inhibits TIFA-mediated TRAF6 activation possibly by inducing a conformational change in TIFA. It regulates USP15-mediated p53 signaling during stressed and malignant hematopoiesis. Both TIFA and TIFAB harbor a conserved FHA domain, which is a small phosphopeptide recognition module.


Pssm-ID: 438716  Cd Length: 133  Bit Score: 40.77  E-value: 2.14e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392891661  25 VVNFGREKKVCHITFdpHAARVSRIHASIE----WGDEGLFFTDK--SKEGT-EINGTRLKQSSQ-ELHeGVYQLAIGGI 96
Cdd:cd22664   34 VLKFGRDSNCCHYTL--QDKRVSRIQFSLQpfkeFNSSVLCFEIKnlSKKTKlWVNGLELGYLNKvELP-AKCTVRFGEF 110
                         90
                 ....*....|
gi 392891661  97 SMTLEVDGDE 106
Cdd:cd22664  111 QFLLEKEDGE 120
PLN03115 PLN03115
ferredoxin--NADP(+) reductase; Provisional
184-252 2.48e-04

ferredoxin--NADP(+) reductase; Provisional


Pssm-ID: 215585 [Multi-domain]  Cd Length: 367  Bit Score: 42.68  E-value: 2.48e-04
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 392891661 184 RPRGKRGPISYRPRMNFddemenrGSRGPRARkADKSGVFDEEAPAKKAKIAPQASQSLIKNFFRPKAP 252
Cdd:PLN03115  30 RIRLKKGPLYYRNNVSS-------GKRVVSIR-AQVTTETTTEAPAKVVKVSKKNEEGVVVNKFRPKEP 90
FHA smart00240
Forkhead associated domain; Found in eukaryotic and prokaryotic proteins. Putative nuclear ...
28-77 2.87e-04

Forkhead associated domain; Found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain.


Pssm-ID: 214578 [Multi-domain]  Cd Length: 52  Bit Score: 38.31  E-value: 2.87e-04
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|..
gi 392891661    28 FGREKKVCHITFDPHaaRVSRIHASIEWGDEGLFFT--DKSKEGTEINGTRL 77
Cdd:smart00240   3 IGRSSEDCDIQLDGP--SISRRHAVIVYDGGGRFYLidLGSTNGTFVNGKRI 52
FHA_PPP1R8 cd22674
forkhead associated (FHA) domain found in protein phosphatase 1 regulatory inhibitor subunit 8 ...
28-88 3.11e-04

forkhead associated (FHA) domain found in protein phosphatase 1 regulatory inhibitor subunit 8 (PPP1R8) and similar proteins; PPP1R8, also called nuclear inhibitor of protein phosphatase 1 (NIPP-1), is an inhibitor subunit of the major nuclear protein phosphatase-1 (PP-1). It has RNA-binding activity but does not cleave RNA and may target PP-1 to RNA-associated substrates. It may also be involved in pre-mRNA splicing and binds DNA and might act as a transcriptional repressor. PPP1R8 seems to be required for cell proliferation. PPP1R8 contains an FHA domain that mediates interactions with threonine-phosphorylated maternal embryonic leucine zipper kinase (MELK). The FHA domain is a small phosphopeptide recognition module.


Pssm-ID: 438726 [Multi-domain]  Cd Length: 108  Bit Score: 39.56  E-value: 3.11e-04
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 392891661  28 FGREKKVCHITFDpHAArVSRIHASIEW--GDEGLFFTD-KSKEGTEINGTRLKQSS-QELHEGV 88
Cdd:cd22674   31 FGRNSDVCDFVLD-HPS-CSRVHAALVYhkHLNRVFLIDlGSTHGTFVGGIRLEPHKpQQLPIDS 93
FHA_Ct664-like cd22696
forkhead associated (FHA) domain found in Chlamydia trachomatis Ct664 protein and similar ...
21-103 7.98e-04

forkhead associated (FHA) domain found in Chlamydia trachomatis Ct664 protein and similar proteins; This subfamily corresponds to a group of uncharacterized FHA domain-containing proteins which show high sequence similarity with Chlamydia trachomatis Ct664 protein. Ct664 situates within the type III secretion system cluster that also encodes an STPK (CT673 in C. trachomatis), suggesting a role of CT664 in the chlamydial type III secretion system by mediating phosphorylation-dependent protein-protein interactions. The FHA domain is a small phosphopeptide recognition module.


Pssm-ID: 438748 [Multi-domain]  Cd Length: 97  Bit Score: 38.24  E-value: 7.98e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392891661  21 EKGSVVNFGREKKVCHITF-DPhaaRVSRIHASIEWGDEGLFFTD--KSKEGTEINGTRLkqSSQELHEGvyQLAIG-GI 96
Cdd:cd22696   18 ESGKTYFIGKDPTVCDIVLqDP---SISRQHARLSIDQDNRVFIEdlSSKNGVLVNGKPI--EGKEEISG--SDVISlGT 90

                 ....*..
gi 392891661  97 SMTLEVD 103
Cdd:cd22696   91 TSFLLVD 97
FHA_DUN1-like cd22683
forkhead associated (FHA) domain found in Saccharomyces cerevisiae DNA damage response protein ...
25-87 8.71e-04

forkhead associated (FHA) domain found in Saccharomyces cerevisiae DNA damage response protein kinase DUN1 and similar proteins; DUN1 is a protein kinase that controls the DNA damage response in yeast. It phosphorylates SML1 on serine residues and cooperates with the PAN deadenylation complex in the regulation of RAD5 mRNA levels and cell survival in response to replicational stress. It contains an FHA domain, which is a small phosphopeptide recognition module.


Pssm-ID: 438735 [Multi-domain]  Cd Length: 96  Bit Score: 38.24  E-value: 8.71e-04
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 392891661  25 VVNFGREKKVCHITFDPHaarVSRIHASIEWGDEGLFFTDK-SKEGTEINGTRLKQSSQELHEG 87
Cdd:cd22683   22 VTTIGRSRSCDLVLSDPS---ISRFHAELRLEQNGINVIDNnSANGTFINGKRIKGKTYILKNG 82
FHA_Rv1747-like_rpt1 cd22694
first forkhead associated (FHA) domain found in Mycobacterium tuberculosis ABC transporter ...
23-79 9.61e-04

first forkhead associated (FHA) domain found in Mycobacterium tuberculosis ABC transporter ATP-binding/permease protein Rv1747 and similar proteins; Rv1747 is a putative ATP-binding cassette (ABC) transporter involved in the translocation of an unknown substrate across the membrane. It is required for normal virulent infection by M. tuberculosis. Rv1747 has a cytoplasmic regulatory module consisting of two pThr-interacting forkhead-associated (FHA) domains connected by a conformationally disordered linker with two phospho-acceptor threonines (pThr). Recruitment and phosphorylation of Rv1747 depend on the interaction between its two non-redundant FHA domains and the autophosphorylated form of serine/threonine protein kinase PknF. This model corresponds to the first FHA domain. The FHA domain is a small phosphopeptide recognition module.


Pssm-ID: 438746 [Multi-domain]  Cd Length: 93  Bit Score: 38.08  E-value: 9.61e-04
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 392891661  23 GSVVNFGREKKvCHITFDPhaARVSRIHASIEWGDEGLFFTDK-SKEGTEINGTRLKQ 79
Cdd:cd22694   15 GSSVRIGRDPD-ADVRLDD--PRVSRRHALLEFDGDGWVYTDLgSRNGTYLNGRRVQQ 69
FHA_RAD53-like_rpt2 cd22690
second forkhead associated (FHA) domain found in Saccharomyces cerevisiae Serine ...
28-87 1.72e-03

second forkhead associated (FHA) domain found in Saccharomyces cerevisiae Serine/threonine-protein kinase RAD53 and similar proteins; RAD53, also called CHEK2 homolog, or serine-protein kinase 1 (Spk1), is a nuclear protein kinase that phosphorylates proteins on serine, threonine, and tyrosine. It controls S-phase checkpoint as well as G1 and G2 DNA damage checkpoints and prevents entry into anaphase and mitotic exit after DNA damage via regulation of the Polo kinase CDC5. It may be involved in the phosphorylation of RPH1. RAD53 contains two FHA domains. This model corresponds to the second one. The FHA domain is a small phosphopeptide recognition module.


Pssm-ID: 438742 [Multi-domain]  Cd Length: 105  Bit Score: 37.66  E-value: 1.72e-03
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 392891661  28 FGREKKVCHITFDPHaarVSRIHASI-----EWGDEGLFFTDKSKEGTEINGTRLKQSSQ-ELHEG 87
Cdd:cd22690   23 IGRSKDCDEEITDPR---ISKHHCIItrkrsGKGLDDVYVTDTSTNGTFINNNRLGKGSQsLLQDG 85
FHA_AGGF1 cd22686
forkhead associated (FHA) domain found in angiogenic factor with G patch and FHA domains 1 ...
29-86 2.43e-03

forkhead associated (FHA) domain found in angiogenic factor with G patch and FHA domains 1 (AGGF1) and similar proteins; AGGF1, also called angiogenic factor VG5Q, or G patch domain-containing protein 7 (GPATC7), or vasculogenesis gene on 5q protein, is an angiogenic factor involved in vascular development, angiogenesis, specification of hemangioblasts, and differentiation of veins. It promotes angiogenesis and the proliferation of endothelial cells. It inhibits inflammatory effect and preserve vascular integrity in non-nervous system diseases. Mutated AGGF1 causes susceptibility to Klippel-Trenaunay syndrome, a vascular disorder. Increased AGGF1 expression is associated with tumor angiogenesis. The FHA domain is a small phosphopeptide recognition module.


Pssm-ID: 438738 [Multi-domain]  Cd Length: 123  Bit Score: 37.65  E-value: 2.43e-03
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 392891661  29 GREKKVCHITFDPHAArVSRIHASIE-WGDEGLFF-TD-KSKEGTEINGTRLKQSSQELHE 86
Cdd:cd22686   31 GREKDHGHTIRIPELG-VSKFHAEIYyDDDEQSYTiVDlGSQNGTYLNGVRISQPKEKSDP 90
FHA_RAD53-like_rpt1 cd22689
first forkhead associated (FHA) domain found in Saccharomyces cerevisiae Serine ...
8-107 5.63e-03

first forkhead associated (FHA) domain found in Saccharomyces cerevisiae Serine/threonine-protein kinase RAD53 and similar proteins; RAD53, also called CHEK2 homolog, or serine-protein kinase 1 (Spk1), is a nuclear protein kinase that phosphorylates proteins on serine, threonine, and tyrosine. It controls S-phase checkpoint as well as G1 and G2 DNA damage checkpoints and prevents entry into anaphase and mitotic exit after DNA damage via regulation of the Polo kinase CDC5. It may be involved in the phosphorylation of RPH1. RAD53 contains two FHA domains. This model corresponds to the first one. The FHA domain is a small phosphopeptide recognition module.


Pssm-ID: 438741 [Multi-domain]  Cd Length: 132  Bit Score: 36.87  E-value: 5.63e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392891661   8 IKNSSGEEVYVLKEKGS---VVNFGREKKvCHITFDphAARVSRIHASIEWGDEG-----LFFTDKSKEGTEINGTRL-K 78
Cdd:cd22689   26 IRDLSGDISQVLKEKRSikkVWTFGRHPA-CDYHLG--NSRLSNKHFQILLGESDpsdgnVLLNDISSNGTWLNGQRLeK 102
                         90       100
                 ....*....|....*....|....*....
gi 392891661  79 QSSQELHEGvyqlaiGGISMTLEVDGDEL 107
Cdd:cd22689  103 NSNQLLSQG------DEITIGVGVTGDIL 125
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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