NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|392891482|ref|NP_496241|]
View 

G-protein coupled receptors family 1 profile domain-containing protein [Caenorhabditis elegans]

Protein Classification

G protein-coupled receptor family protein( domain architecture ID 705710)

G protein-coupled receptor family protein is a seven-transmembrane G protein-coupled receptor (7TM-GPCR) family protein which typically transmits an extracellular signal into the cell by the conformational rearrangement of the 7TM helices and by the subsequent binding and activation of an intracellular heterotrimeric G protein; GPCR ligands include light-sensitive compounds, odors, pheromones, hormones, and neurotransmitters

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

Name Accession Description Interval E-value
7tm_GPCRs super family cl28897
seven-transmembrane G protein-coupled receptor superfamily; This hierarchical evolutionary ...
32-418 1.82e-16

seven-transmembrane G protein-coupled receptor superfamily; This hierarchical evolutionary model represents the seven-transmembrane (7TM) receptors, often referred to as G protein-coupled receptors (GPCRs), which transmit physiological signals from the outside of the cell to the inside via G proteins. GPCRs constitute the largest known superfamily of transmembrane receptors across the three kingdoms of life that respond to a wide variety of extracellular stimuli including peptides, lipids, neurotransmitters, amino acids, hormones, and sensory stimuli such as light, smell and taste. All GPCRs share a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes. However, some 7TM receptors, such as the type 1 microbial rhodopsins, do not activate G proteins. Based on sequence similarity, GPCRs can be divided into six major classes: class A (the rhodopsin-like family), class B (the Methuselah-like, adhesion and secretin-like receptor family), class C (the metabotropic glutamate receptor family), class D (the fungal mating pheromone receptors), class E (the cAMP receptor family), and class F (the frizzled/smoothened receptor family). Nearly 800 human GPCR genes have been identified and are involved essentially in all major physiological processes. Approximately 40% of clinically marketed drugs mediate their effects through modulation of GPCR function for the treatment of a variety of human diseases including bacterial infections.


The actual alignment was detected with superfamily member cd14978:

Pssm-ID: 475119 [Multi-domain]  Cd Length: 299  Bit Score: 79.60  E-value: 1.82e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392891482  32 FVIISGCTTVALFGVLANMLLMAVF-RRSLPSSI--FLATLATCDMLICLTYTLLFGVDAgIWYRKNTTLFFLYHRYIVP 108
Cdd:cd14978    1 VLYGYVLPVICIFGIIGNILNLVVLtRKSMRSSTnvYLAALAVSDILVLLSALPLFLLPY-IADYSSSFLSYFYAYFLPY 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392891482 109 VFFIAKVVQFAIPFILILITFERYLWTCterKRKAFSAIFNERGRIVTVIFVCFFSVAIRIPVLYAMKVKTFPLCDDYFR 188
Cdd:cd14978   80 IYPLANTFQTASVWLTVALTVERYIAVC---HPLKARTWCTPRRARRVILIIIIFSLLLNLPRFFEYEVVECENCNNNSY 156
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392891482 189 SESLDGTPFAATEAYEIYDFHVITAIQMMFPFVVLLLLNLTIIKRLvaekrenmypilrgagtttevkkasfvqgnlpen 268
Cdd:cd14978  157 YYVIPTLLRQNETYLLKYYFWLYAIFVVLLPFILLLILNILLIRAL---------------------------------- 202
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392891482 269 yvllqvaadvikeslihssaavsseivenqnvdditdsvdvelprHRPSIFNTFVLALRESSRSKRSQLRNAIYTMLAIV 348
Cdd:cd14978  203 ---------------------------------------------RKSKKRRRLLRRRRRLLSRSQRRERRTTIMLIAVV 237
                        330       340       350       360       370       380       390
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392891482 349 TSYLVCNGVHLFLTILERFDPSYLYestdrmqsSTFYIVLSDTVSICYMASSAIRIFIYAKCNPKLRQEI 418
Cdd:cd14978  238 IVFLICNLPAGILNILEAIFGESFL--------SPIYQLLGDISNLLVVLNSAVNFIIYCLFSSKFRRTF 299
 
Name Accession Description Interval E-value
7tmA_FMRFamide_R-like cd14978
FMRFamide (Phe-Met-Arg-Phe) receptors and related proteins, member of the class A family of ...
32-418 1.82e-16

FMRFamide (Phe-Met-Arg-Phe) receptors and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes Drosophila melanogaster G-protein coupled FMRFamide (Phe-Met-Arg-Phe-NH2) receptor DrmFMRFa-R and related invertebrate receptors, as well as the vertebrate proteins GPR139 and GPR142. DrmFMRFa-R binds with high affinity to FMRFamide and intrinsic FMRFamide-related peptides. FMRFamide is a neuropeptide from the family of FMRFamide-related peptides (FaRPs), which all containing a C-terminal RFamide (Arg-Phe-NH2) motif and have diverse functions in the central and peripheral nervous systems. FMRFamide is an important neuropeptide in many types of invertebrates such as insects, nematodes, molluscs, and worms. In invertebrates, the FMRFamide-related peptides are involved in the regulation of heart rate, blood pressure, gut motility, feeding behavior, and reproduction. On the other hand, in vertebrates such as mice, they play a role in the modulation of morphine-induced antinociception. Orphan receptors GPR139 and GPR142 are very closely related G protein-coupled receptors, but they have different expression patterns in the brain and in other tissues. These receptors couple to inhibitory G proteins and activate phospholipase C. Studies suggested that dimer formation may be required for their proper function. GPR142 is predominantly expressed in pancreatic beta-cells and mediates enhancement of glucose-stimulated insulin secretion, whereas GPR139 is mostly expressed in the brain and is suggested to play a role in the control of locomotor activity. Tryptophan and phenylalanine have been identified as putative endogenous ligands of GPR139.


Pssm-ID: 410630 [Multi-domain]  Cd Length: 299  Bit Score: 79.60  E-value: 1.82e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392891482  32 FVIISGCTTVALFGVLANMLLMAVF-RRSLPSSI--FLATLATCDMLICLTYTLLFGVDAgIWYRKNTTLFFLYHRYIVP 108
Cdd:cd14978    1 VLYGYVLPVICIFGIIGNILNLVVLtRKSMRSSTnvYLAALAVSDILVLLSALPLFLLPY-IADYSSSFLSYFYAYFLPY 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392891482 109 VFFIAKVVQFAIPFILILITFERYLWTCterKRKAFSAIFNERGRIVTVIFVCFFSVAIRIPVLYAMKVKTFPLCDDYFR 188
Cdd:cd14978   80 IYPLANTFQTASVWLTVALTVERYIAVC---HPLKARTWCTPRRARRVILIIIIFSLLLNLPRFFEYEVVECENCNNNSY 156
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392891482 189 SESLDGTPFAATEAYEIYDFHVITAIQMMFPFVVLLLLNLTIIKRLvaekrenmypilrgagtttevkkasfvqgnlpen 268
Cdd:cd14978  157 YYVIPTLLRQNETYLLKYYFWLYAIFVVLLPFILLLILNILLIRAL---------------------------------- 202
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392891482 269 yvllqvaadvikeslihssaavsseivenqnvdditdsvdvelprHRPSIFNTFVLALRESSRSKRSQLRNAIYTMLAIV 348
Cdd:cd14978  203 ---------------------------------------------RKSKKRRRLLRRRRRLLSRSQRRERRTTIMLIAVV 237
                        330       340       350       360       370       380       390
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392891482 349 TSYLVCNGVHLFLTILERFDPSYLYestdrmqsSTFYIVLSDTVSICYMASSAIRIFIYAKCNPKLRQEI 418
Cdd:cd14978  238 IVFLICNLPAGILNILEAIFGESFL--------SPIYQLLGDISNLLVVLNSAVNFIIYCLFSSKFRRTF 299
 
Name Accession Description Interval E-value
7tmA_FMRFamide_R-like cd14978
FMRFamide (Phe-Met-Arg-Phe) receptors and related proteins, member of the class A family of ...
32-418 1.82e-16

FMRFamide (Phe-Met-Arg-Phe) receptors and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes Drosophila melanogaster G-protein coupled FMRFamide (Phe-Met-Arg-Phe-NH2) receptor DrmFMRFa-R and related invertebrate receptors, as well as the vertebrate proteins GPR139 and GPR142. DrmFMRFa-R binds with high affinity to FMRFamide and intrinsic FMRFamide-related peptides. FMRFamide is a neuropeptide from the family of FMRFamide-related peptides (FaRPs), which all containing a C-terminal RFamide (Arg-Phe-NH2) motif and have diverse functions in the central and peripheral nervous systems. FMRFamide is an important neuropeptide in many types of invertebrates such as insects, nematodes, molluscs, and worms. In invertebrates, the FMRFamide-related peptides are involved in the regulation of heart rate, blood pressure, gut motility, feeding behavior, and reproduction. On the other hand, in vertebrates such as mice, they play a role in the modulation of morphine-induced antinociception. Orphan receptors GPR139 and GPR142 are very closely related G protein-coupled receptors, but they have different expression patterns in the brain and in other tissues. These receptors couple to inhibitory G proteins and activate phospholipase C. Studies suggested that dimer formation may be required for their proper function. GPR142 is predominantly expressed in pancreatic beta-cells and mediates enhancement of glucose-stimulated insulin secretion, whereas GPR139 is mostly expressed in the brain and is suggested to play a role in the control of locomotor activity. Tryptophan and phenylalanine have been identified as putative endogenous ligands of GPR139.


Pssm-ID: 410630 [Multi-domain]  Cd Length: 299  Bit Score: 79.60  E-value: 1.82e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392891482  32 FVIISGCTTVALFGVLANMLLMAVF-RRSLPSSI--FLATLATCDMLICLTYTLLFGVDAgIWYRKNTTLFFLYHRYIVP 108
Cdd:cd14978    1 VLYGYVLPVICIFGIIGNILNLVVLtRKSMRSSTnvYLAALAVSDILVLLSALPLFLLPY-IADYSSSFLSYFYAYFLPY 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392891482 109 VFFIAKVVQFAIPFILILITFERYLWTCterKRKAFSAIFNERGRIVTVIFVCFFSVAIRIPVLYAMKVKTFPLCDDYFR 188
Cdd:cd14978   80 IYPLANTFQTASVWLTVALTVERYIAVC---HPLKARTWCTPRRARRVILIIIIFSLLLNLPRFFEYEVVECENCNNNSY 156
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392891482 189 SESLDGTPFAATEAYEIYDFHVITAIQMMFPFVVLLLLNLTIIKRLvaekrenmypilrgagtttevkkasfvqgnlpen 268
Cdd:cd14978  157 YYVIPTLLRQNETYLLKYYFWLYAIFVVLLPFILLLILNILLIRAL---------------------------------- 202
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392891482 269 yvllqvaadvikeslihssaavsseivenqnvdditdsvdvelprHRPSIFNTFVLALRESSRSKRSQLRNAIYTMLAIV 348
Cdd:cd14978  203 ---------------------------------------------RKSKKRRRLLRRRRRLLSRSQRRERRTTIMLIAVV 237
                        330       340       350       360       370       380       390
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392891482 349 TSYLVCNGVHLFLTILERFDPSYLYestdrmqsSTFYIVLSDTVSICYMASSAIRIFIYAKCNPKLRQEI 418
Cdd:cd14978  238 IVFLICNLPAGILNILEAIFGESFL--------SPIYQLLGDISNLLVVLNSAVNFIIYCLFSSKFRRTF 299
7tm_classA_rhodopsin-like cd00637
rhodopsin receptor-like class A family of the seven-transmembrane G protein-coupled receptor ...
34-234 1.72e-07

rhodopsin receptor-like class A family of the seven-transmembrane G protein-coupled receptor superfamily; Class A rhodopsin-like receptors constitute about 90% of all GPCRs. The class A GPCRs include the light-sensitive rhodopsin as well as receptors for biogenic amines, lipids, nucleotides, odorants, peptide hormones, and a variety of other ligands. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes. Based on sequence similarity, GPCRs can be divided into six major classes: class A (rhodopsin-like family), class B (Methuselah-like, adhesion and secretin-like receptor family), class C (metabotropic glutamate receptor family), class D (fungal mating pheromone receptors), class E (cAMP receptor family), and class F (frizzled/smoothened receptor family). Nearly 800 human GPCR genes have been identified and are involved essentially in all major physiological processes. Approximately 40% of clinically marketed drugs mediate their effects through modulation of GPCR function for the treatment of a variety of human diseases including bacterial infections.


Pssm-ID: 410626 [Multi-domain]  Cd Length: 275  Bit Score: 52.29  E-value: 1.72e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392891482  34 IISGCTTVALFGVLANMLLMAVFRRS----LPSSIFLATLATCDMLICLTYTLLFGVDAGIWYRKNTTLFFLYHRYIVPV 109
Cdd:cd00637    1 LAVLYILIFVVGLVGNLLVILVILRNrrlrTVTNYFILNLAVADLLVGLLVIPFSLVSLLLGRWWFGDALCKLLGFLQSV 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392891482 110 FFIAKVvqfaipFILILITFERYLWTCterKRKAFSAIFNERGRIVTVIFVCFFSVAIRIPVLYAMKVKTFPLCDDYFrs 189
Cdd:cd00637   81 SLLASI------LTLTAISVDRYLAIV---HPLRYRRRFTRRRAKLLIALIWLLSLLLALPPLLGWGVYDYGGYCCCC-- 149
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*
gi 392891482 190 esldgTPFAATEAYEIYDFhVITAIQMMFPFVVLLLLNLTIIKRL 234
Cdd:cd00637  150 -----LCWPDLTLSKAYTI-FLFVLLFLLPLLVIIVCYVRIFRKL 188
7tmA_NPYR-like cd15203
neuropeptide Y receptors and related proteins, member of the class A family of ...
32-234 1.56e-04

neuropeptide Y receptors and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; NPY is a 36-amino acid peptide neurotransmitter with a C-terminal tyrosine amide residue that is widely distributed in the brain and the autonomic nervous system of many mammalian species. NPY exerts its functions through five, G-protein coupled receptor subtypes including NPY1R, NPY2R, NPY4R, NPY5R, and NPY6R; however, NPY6R is not functional in humans. NYP receptors are also activated by its two other family members, peptide YY (PYY) and pancreatic polypeptide (PP). They typically couple to Gi or Go proteins, which leads to a decrease in adenylate cyclase activity, thereby decreasing intracellular cAMP levels, and are involved in diverse physiological roles including appetite regulation, circadian rhythm, and anxiety. Also included in this subgroup is prolactin-releasing peptide (PrRP) receptor (previously known as GPR10), which is activated by its endogenous ligand PrRP, a neuropeptide possessing C-terminal Arg-Phe-amide motif. There are two active isoforms of PrRP in mammals: one consists of 20 amino acid residues (PrRP-20) and the other consists of 31 amino acid residues (PrRP-31). PrRP receptor shows significant sequence homology to the NPY receptors, and a micromolar level of NPY can bind and completely inhibit the PrRP-evoked intracellular calcium response in PrRP receptor-expressing cells, suggesting that the PrRP receptor shares a common ancestor with the NPY receptors.


Pssm-ID: 320331 [Multi-domain]  Cd Length: 293  Bit Score: 43.36  E-value: 1.56e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392891482  32 FVIISGCTTVALFGVLAN-MLLMAVFR-RSLPSS--IFLATLATCDMLICLTyTLLFgvdagiwyrknTTLFFLYHRYIV 107
Cdd:cd15203    1 IILILLYGLIIVLGVVGNlLVIYVVLRnKSMQTVtnIFILNLAVSDLLLCLV-SLPF-----------TLIYTLTKNWPF 68
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392891482 108 P------VFFIAKVVQFAIPFILILITFERYLWTCTERKRKafsaiFNERGRIVTVIFVCFFSVAIRIPVLYAMKVKTFP 181
Cdd:cd15203   69 GsilcklVPSLQGVSIFVSTLTLTAIAIDRYQLIVYPTRPR-----MSKRHALLIIALIWILSLLLSLPLAIFQELSDVP 143
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 392891482 182 L----CDDYFRSESLDGTPFAateayEIYDFhVITAIQMMFPFVVLLLLNLTIIKRL 234
Cdd:cd15203  144 IeilpYCGYFCTESWPSSSSR-----LIYTI-SVLVLQFVIPLLIISFCYFRISLKL 194
7tmA_GPRnna14-like cd15001
GPRnna14 and related proteins, member of the class A family of seven-transmembrane G ...
39-223 4.53e-04

GPRnna14 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes the orphan G-protein coupled receptor GPRnna14 found in body louse (Pediculus humanus humanus) as well as its closely related proteins of unknown function. These receptors are members of the class A rhodopsin-like G-protein coupled receptors. As an obligatory parasite of humans, the body louse is an important vector for human diseases, including epidemic typhus, relapsing fever, and trench fever. GPRnna14 shares significant sequence similarity with the members of the neurotensin receptor family. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320132 [Multi-domain]  Cd Length: 266  Bit Score: 41.88  E-value: 4.53e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392891482  39 TTVALFGVLAN-MLLMAVFR-RSLPSSI--FLATLATCDMLICLTYtLLFGVDAGIWYRKNTTLFFLYH-RYIVPVFFIA 113
Cdd:cd15001    7 VITFVLGLIGNsLVIFVVARfRRMRSVTnvFLASLATADLLLLVFC-VPLKTAEYFSPTWSLGAFLCKAvAYLQLLSFIC 85
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392891482 114 KVvqfaipFILILITFERYLWTCTERKRKAFSAIFNERgRIVTVIFVcfFSVAIRIPVLYAMKVKTFPLCDDYFRSESLD 193
Cdd:cd15001   86 SV------LTLTAISIERYYVILHPMKAKSFCTIGRAR-KVALLIWI--LSAILASPVLFGQGLVRYESENGVTVYHCQK 156
                        170       180       190
                 ....*....|....*....|....*....|.
gi 392891482 194 GTP-FAATEAYEIYDFHVItaiqMMFPFVVL 223
Cdd:cd15001  157 AWPsTLYSRLYVVYLAIVI----FFIPLIVM 183
7tmA_GPR31 cd15199
G protein-coupled receptor 31, member of the class A family of seven-transmembrane G ...
61-240 9.08e-04

G protein-coupled receptor 31, member of the class A family of seven-transmembrane G protein-coupled receptors; GPR31, also known as 12-(S)-HETE receptor, is a high-affinity receptor for 12-(S)-hydroxy-5,8,10,14-eicosatetraenoic acid. Phylogenetic analysis showed that GPR31 and oxoeicosanoid receptor 1 (OXER1, GPR170) are the most closely related receptors to the hydroxycarboxylic acid receptor family (HCARs). GPR31, like OXER1, activates the ERK1/2 (MAPK3/MAPK1) pathway of intracellular signaling, but unlike the OXER1, does not cause increase in the cytosolic calcium level. GPR31 is also shown to activate NFkB. 12-(S)-HETE is a 12-lipoxygenase metabolite of arachidonic acid produced by mammalian platelets and tumor cells. It promotes tumor cells adhesion to endothelial cells and sub-endothelial matrix, which is a critical step for metastasis.


Pssm-ID: 320327 [Multi-domain]  Cd Length: 278  Bit Score: 40.93  E-value: 9.08e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392891482  61 PSSIFLATLATCDML--ICLTYTLLFGVDAGIWYRKNTTLfflyhRYIVPVFFIAKVVQFAIpfiLILITFERYLWTCTE 138
Cdd:cd15199   34 PYAVYLLNLVLADVLllICLPFKAYFYLNGNRWSLGGGTC-----KALLFMLSLSRGVSIAF---LTAVALDRYFRVVHP 105
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392891482 139 RKRKAFsaiFNERGRIVTVIFVCFFSVAIRIPVLYAMKVKTFPLCDDYFRSESLDgtpfaateaYEIYDFHVITAIQMMF 218
Cdd:cd15199  106 RGKKNS---LSLQAAPYISFLVWLLLVGLTIPTLLASQPKNFTECNSFSPKDDED---------FSDTWQEAVFFLQFLL 173
                        170       180
                 ....*....|....*....|..
gi 392891482 219 PFVVLLLLNLTIIKRLVAEKRE 240
Cdd:cd15199  174 PFGLIVFCTVRIIRRLKKRLRD 195
7tmA_ETH-R cd14997
ecdysis-triggering hormone receptors, member of the class A family of seven-transmembrane G ...
38-235 3.85e-03

ecdysis-triggering hormone receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; This subgroup represents the ecdysis-triggering hormone receptors found in insects, which are members of the class A family of seven-transmembrane G-protein coupled receptors. Ecdysis-triggering hormones are vital regulatory signals that govern the stereotypic physiological sequence leading to cuticle shedding in insects. Thus, the ETH signaling system has been a target for the design of more sophisticated insect-selective pest control strategies. Two subtypes of ecdysis-triggering hormone receptor were identified in Drosophila melanogaster. Blood-borne ecdysis-triggering hormone (ETH) activates the behavioral sequence through direct actions on the central nervous system. In insects, ecdysis is thought to be controlled by the interaction between peptide hormones; in particular between ecdysis-triggering hormone (ETH) from the periphery and eclosion hormone (EH) and crustacean cardioactive peptide (CCAP) from the central nervous system. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320128 [Multi-domain]  Cd Length: 294  Bit Score: 39.20  E-value: 3.85e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392891482  38 CTTVALFGVLANMLLMAV---FRRSL-PSSIFLATLATCDMLICLTYTLLFGVDagIWYRKnTTLFFLYHRYIVPvfFIA 113
Cdd:cd14997    7 YGVIFVVGVLGNVLVGIVvwkNKDMRtPTNIFLVNLSVADLLVLLVCMPVALVE--TWARE-PWLLGEFMCKLVP--FVE 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392891482 114 KVVQFAIPFILILITFERYLWTCTERKRKAFSAifneRGRIVTVIFVCF-FSVAIRIPVLyamkvkTFPlcdDYFRSESL 192
Cdd:cd14997   82 LTVAHASVLTILAISFERYYAICHPLQAKYVCT----KRRALVIIALIWlLALLTSSPVL------FIT---EFKEEDFN 148
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*...
gi 392891482 193 DGTPFA--ATEAYEIYDFHVITAIQMMF---PFVVLLLLNLTIIKRLV 235
Cdd:cd14997  149 DGTPVAvcRTPADTFWKVAYILSTIVVFfvvPLAILSGLYSVICRRLV 196
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH