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Conserved domains on  [gi|212645369|ref|NP_495257|]
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BPL/LPL catalytic domain-containing protein [Caenorhabditis elegans]

Protein Classification

biotin--[acetyl-CoA-carboxylase] ligase( domain architecture ID 11417403)

biotin--[acetyl-CoA-carboxylase] ligase catalyzes the formation of biotinyl-5'-AMP from biotin and ATP, and the succeeding biotinylation of the biotin carboxyl carrier protein

CATH:  3.30.930.10
EC:  6.3.4.-
PubMed:  10470036

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
BirA2 COG0340
Biotin-(acetyl-CoA carboxylase) ligase [Coenzyme transport and metabolism]; Biotin-(acetyl-CoA ...
952-1199 9.19e-35

Biotin-(acetyl-CoA carboxylase) ligase [Coenzyme transport and metabolism]; Biotin-(acetyl-CoA carboxylase) ligase is part of the Pathway/BioSystem: Biotin biosynthesis


:

Pssm-ID: 440109 [Multi-domain]  Cd Length: 241  Bit Score: 133.38  E-value: 9.19e-35
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 212645369  952 YFEQIHSkigqvvllvdvattTMDI-IESVNAGIPslESVVVIANRQISGRGRGGNEFLCPRGMamfNFSFSISKKSRI- 1029
Cdd:COG0340     4 VFDEVDS--------------TNDEaKELAREGAP--EGTVVVAEEQTAGRGRRGRSWVSPPGK---GLYFSLLLRPDLp 64
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 212645369 1030 AKHLPILQHIFCVALVEAARNLSGypeFPLHIKWPNDLYCERsHKVGGMLLQCSTRDDSFRVS-IGCGMNVSN------- 1101
Cdd:COG0340    65 PARLPLLSLAAGLAVAEALRELTG---VDVGLKWPNDILLNG-KKLAGILIEASGEGDGIDWVvIGIGINVNQppfdpee 140
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 212645369 1102 -DKPTMCLNDmlpkEAETRITKEQLIAETINKFTYYMKDYEDNGPETFKKKYHEYWLHSQQEVLLSDFNERV--TIRGID 1178
Cdd:COG0340   141 lDQPATSLKE----ETGKEVDREELLAALLEELEELYDRFLEEGFAPILEEWRARLATLGRRVRVETGGETLegIAVGID 216
                         250       260
                  ....*....|....*....|.
gi 212645369 1179 DDGYLQVRSKSNPDKIFSIGD 1199
Cdd:COG0340   217 EDGALLLETADGEIRAVAAGE 237
 
Name Accession Description Interval E-value
BirA2 COG0340
Biotin-(acetyl-CoA carboxylase) ligase [Coenzyme transport and metabolism]; Biotin-(acetyl-CoA ...
952-1199 9.19e-35

Biotin-(acetyl-CoA carboxylase) ligase [Coenzyme transport and metabolism]; Biotin-(acetyl-CoA carboxylase) ligase is part of the Pathway/BioSystem: Biotin biosynthesis


Pssm-ID: 440109 [Multi-domain]  Cd Length: 241  Bit Score: 133.38  E-value: 9.19e-35
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 212645369  952 YFEQIHSkigqvvllvdvattTMDI-IESVNAGIPslESVVVIANRQISGRGRGGNEFLCPRGMamfNFSFSISKKSRI- 1029
Cdd:COG0340     4 VFDEVDS--------------TNDEaKELAREGAP--EGTVVVAEEQTAGRGRRGRSWVSPPGK---GLYFSLLLRPDLp 64
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 212645369 1030 AKHLPILQHIFCVALVEAARNLSGypeFPLHIKWPNDLYCERsHKVGGMLLQCSTRDDSFRVS-IGCGMNVSN------- 1101
Cdd:COG0340    65 PARLPLLSLAAGLAVAEALRELTG---VDVGLKWPNDILLNG-KKLAGILIEASGEGDGIDWVvIGIGINVNQppfdpee 140
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 212645369 1102 -DKPTMCLNDmlpkEAETRITKEQLIAETINKFTYYMKDYEDNGPETFKKKYHEYWLHSQQEVLLSDFNERV--TIRGID 1178
Cdd:COG0340   141 lDQPATSLKE----ETGKEVDREELLAALLEELEELYDRFLEEGFAPILEEWRARLATLGRRVRVETGGETLegIAVGID 216
                         250       260
                  ....*....|....*....|.
gi 212645369 1179 DDGYLQVRSKSNPDKIFSIGD 1199
Cdd:COG0340   217 EDGALLLETADGEIRAVAAGE 237
BPL cd16442
biotin protein ligase; Biotin protein ligase (EC 6.3.4.15) catalyzes the synthesis of an ...
964-1136 1.69e-34

biotin protein ligase; Biotin protein ligase (EC 6.3.4.15) catalyzes the synthesis of an activated form of biotin, biotinyl-5'-AMP, from substrates biotin and ATP followed by biotinylation of the biotin carboxyl carrier protein subunit of acetyl-CoA carboxylase. Biotin protein ligase (BPL) is the enzyme responsible for attaching biotin to a specific lysine at the active site of biotin enzymes. Biotin attachment is a two step reaction that results in the formation of an amide linkage between the carboxyl group of biotin and the epsilon-amino group of the modified lysine.


Pssm-ID: 319741 [Multi-domain]  Cd Length: 173  Bit Score: 130.08  E-value: 1.69e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 212645369  964 VLLVDVATTTMDIIESVNAGIPsLESVVVIANRQISGRGRGGNEFLCPRG-MAMFNFSFSISKKSriaKHLPILQHIFCV 1042
Cdd:cd16442     2 LIVLDEIDSTNDEAKELARSGA-PEGTVVVAEEQTAGRGRRGRKWESPKGkGLYFSLLLRPDVPP---AEAPLLTLLAAV 77
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 212645369 1043 ALVEAARNLSGypeFPLHIKWPNDLYCErSHKVGGMLLQCSTRDDS-FRVSIGCGMNVSNDKPTMCLND-----MLPKEA 1116
Cdd:cd16442    78 AVAEALEKLGG---IPVQIKWPNDILVN-GKKLAGILTEASAEGEGvAAVVIGIGINVNNTPPPEPLPDtslatSLGKEV 153
                         170       180
                  ....*....|....*....|
gi 212645369 1117 ETRITKEQLIAETINKFTYY 1136
Cdd:cd16442   154 DRNELLEELLAALENRLELF 173
birA_ligase TIGR00121
birA, biotin-[acetyl-CoA-carboxylase] ligase region; This model represents the ...
975-1196 4.74e-21

birA, biotin-[acetyl-CoA-carboxylase] ligase region; This model represents the biotin--acetyl-CoA-carboxylase ligase region of biotin--acetyl-CoA-carboxylase ligase. In Escherichia coli and some other species, this enzyme is part of a bifunction protein BirA that includes a small, N-terminal biotin operon repressor domain. Proteins identified by this model should not be called bifunctional unless they are also identified by birA_repr_reg (TIGR00122). The protein name suggests that this enzyme transfers biotin only to acetyl-CoA-carboxylase but it also transfers the biotin moiety to other proteins. The apparent orthologs among the eukaryotes are larger proteins that contain a single copy of this domain. [Protein fate, Protein modification and repair]


Pssm-ID: 272917 [Multi-domain]  Cd Length: 237  Bit Score: 93.62  E-value: 4.74e-21
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 212645369   975 DIIESVN------AGIPSLESVVVIANRQISGRGRGGNEFLCPRGMAMFNF--SFSISKKSriakhLPILQHIFCVALVE 1046
Cdd:TIGR00121    6 DVIDSTNqyalelAKEGKLKGDLVVAEYQTAGRGRRGRKWLSPEGGLYFSLilRPDLPKSP-----APGLTLVAGIAIAE 80
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 212645369  1047 AARNLSgypeFPLHIKWPNDLYCErSHKVGGMLLQCSTRDDSFR-VSIGCGMNVSNDKPTMCLNDM---LPKEAETRITK 1122
Cdd:TIGR00121   81 VLKELG----DQVQVKWPNDILLK-DKKLGGILTELTGKENRADyVVIGIGINVQNRKPAESLREQaisLSEEAGIDLDR 155
                          170       180       190       200       210       220       230
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 212645369  1123 EQLIAETINKFTYYMKDYEDNGPETFKKKYHEYWLHSQQEV-LLSDFNERVTI-RGIDDDGYLQVRSKSNPDKIFS 1196
Cdd:TIGR00121  156 GELIEGFLRNFEENLEWFEQEGIDEILSKWEKLSAHIGREVsLTTGNGEIEGIaRGIDKDGALLLEDGGGIKKIIS 231
PRK11886 PRK11886
bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA;
975-1186 9.01e-18

bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA;


Pssm-ID: 237010 [Multi-domain]  Cd Length: 319  Bit Score: 85.61  E-value: 9.01e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 212645369  975 DIIESVNA----GIPSLESV-VVIANRQISGRGRGGNEFLCPRGMamfNFSFSISKKSRI-AKHLPILQHIFCVALVEAA 1048
Cdd:PRK11886   84 PVIDSTNQylldRIAELKSGdLCLAEYQTAGRGRRGRQWFSPFGG---NLYLSLYWRLNQgPAQAMGLSLVVGIAIAEAL 160
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 212645369 1049 RNLsGYPEfpLHIKWPNDLYCeRSHKVGGMLLQCSTR-DDSFRVSIGCGMNVS--------NDKPTMCLNdmlpkEAETR 1119
Cdd:PRK11886  161 RRL-GAID--VGLKWPNDIYL-NDRKLAGILVELSGEtGDAAHVVIGIGINVAmpdfpeelIDQPWSDLQ-----EAGPT 231
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 212645369 1120 ITKEQLIAETINKFTYYMKDYEDNGPETFKKKYHEYWLHSQQEVLLSDFNERV--TIRGIDDDGYLQVR 1186
Cdd:PRK11886  232 IDRNQLAAELIKQLRAALELFEQEGLAPFLERWKKLDLFLGREVKLIIGDKEIsgIARGIDEQGALLLE 300
BPL_LplA_LipB pfam03099
Biotin/lipoate A/B protein ligase family; This family includes biotin protein ligase, ...
971-1098 2.98e-15

Biotin/lipoate A/B protein ligase family; This family includes biotin protein ligase, lipoate-protein ligase A and B. Biotin is covalently attached at the active site of certain enzymes that transfer carbon dioxide from bicarbonate to organic acids to form cellular metabolites. Biotin protein ligase (BPL) is the enzyme responsible for attaching biotin to a specific lysine at the active site of biotin enzymes. Each organizm probably has only one BPL. Biotin attachment is a two step reaction that results in the formation of an amide linkage between the carboxyl group of biotin and the epsilon-amino group of the modified lysine. Lipoate-protein ligase A (LPLA) catalyzes the formation of an amide linkage between lipoic acid and a specific lysine residue in lipoate dependent enzymes. The unusual biosynthesis pathway of lipoic acid is mechanistically intertwined with attachment of the cofactor.


Pssm-ID: 427135  Cd Length: 132  Bit Score: 73.63  E-value: 2.98e-15
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 212645369   971 TTTMDIIESVNagIPSLES-VVVIANRQISGRGRGGNEFLCPRGMAMFNFSFSISKKSRIAKHLPILQHIFCVALVEAAR 1049
Cdd:pfam03099    6 KSTNTYLEELN--SSELESgGVVVVRRQTGGRGRGGNVWHSPKGCLTYSLLLSKEHPNVDPSVLEFYVLELVLAVLEALG 83
                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|.
gi 212645369  1050 N-LSGYPEFPLHIKWPNDLYCErSHKVGGmLLQCSTRD-DSFRVSIGCGMN 1098
Cdd:pfam03099   84 LyKPGISGIPCFVKWPNDLYVN-GRKLAG-ILQRSTRGgTLHHGVIGLGVN 132
 
Name Accession Description Interval E-value
BirA2 COG0340
Biotin-(acetyl-CoA carboxylase) ligase [Coenzyme transport and metabolism]; Biotin-(acetyl-CoA ...
952-1199 9.19e-35

Biotin-(acetyl-CoA carboxylase) ligase [Coenzyme transport and metabolism]; Biotin-(acetyl-CoA carboxylase) ligase is part of the Pathway/BioSystem: Biotin biosynthesis


Pssm-ID: 440109 [Multi-domain]  Cd Length: 241  Bit Score: 133.38  E-value: 9.19e-35
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 212645369  952 YFEQIHSkigqvvllvdvattTMDI-IESVNAGIPslESVVVIANRQISGRGRGGNEFLCPRGMamfNFSFSISKKSRI- 1029
Cdd:COG0340     4 VFDEVDS--------------TNDEaKELAREGAP--EGTVVVAEEQTAGRGRRGRSWVSPPGK---GLYFSLLLRPDLp 64
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 212645369 1030 AKHLPILQHIFCVALVEAARNLSGypeFPLHIKWPNDLYCERsHKVGGMLLQCSTRDDSFRVS-IGCGMNVSN------- 1101
Cdd:COG0340    65 PARLPLLSLAAGLAVAEALRELTG---VDVGLKWPNDILLNG-KKLAGILIEASGEGDGIDWVvIGIGINVNQppfdpee 140
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 212645369 1102 -DKPTMCLNDmlpkEAETRITKEQLIAETINKFTYYMKDYEDNGPETFKKKYHEYWLHSQQEVLLSDFNERV--TIRGID 1178
Cdd:COG0340   141 lDQPATSLKE----ETGKEVDREELLAALLEELEELYDRFLEEGFAPILEEWRARLATLGRRVRVETGGETLegIAVGID 216
                         250       260
                  ....*....|....*....|.
gi 212645369 1179 DDGYLQVRSKSNPDKIFSIGD 1199
Cdd:COG0340   217 EDGALLLETADGEIRAVAAGE 237
BPL cd16442
biotin protein ligase; Biotin protein ligase (EC 6.3.4.15) catalyzes the synthesis of an ...
964-1136 1.69e-34

biotin protein ligase; Biotin protein ligase (EC 6.3.4.15) catalyzes the synthesis of an activated form of biotin, biotinyl-5'-AMP, from substrates biotin and ATP followed by biotinylation of the biotin carboxyl carrier protein subunit of acetyl-CoA carboxylase. Biotin protein ligase (BPL) is the enzyme responsible for attaching biotin to a specific lysine at the active site of biotin enzymes. Biotin attachment is a two step reaction that results in the formation of an amide linkage between the carboxyl group of biotin and the epsilon-amino group of the modified lysine.


Pssm-ID: 319741 [Multi-domain]  Cd Length: 173  Bit Score: 130.08  E-value: 1.69e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 212645369  964 VLLVDVATTTMDIIESVNAGIPsLESVVVIANRQISGRGRGGNEFLCPRG-MAMFNFSFSISKKSriaKHLPILQHIFCV 1042
Cdd:cd16442     2 LIVLDEIDSTNDEAKELARSGA-PEGTVVVAEEQTAGRGRRGRKWESPKGkGLYFSLLLRPDVPP---AEAPLLTLLAAV 77
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 212645369 1043 ALVEAARNLSGypeFPLHIKWPNDLYCErSHKVGGMLLQCSTRDDS-FRVSIGCGMNVSNDKPTMCLND-----MLPKEA 1116
Cdd:cd16442    78 AVAEALEKLGG---IPVQIKWPNDILVN-GKKLAGILTEASAEGEGvAAVVIGIGINVNNTPPPEPLPDtslatSLGKEV 153
                         170       180
                  ....*....|....*....|
gi 212645369 1117 ETRITKEQLIAETINKFTYY 1136
Cdd:cd16442   154 DRNELLEELLAALENRLELF 173
birA_ligase TIGR00121
birA, biotin-[acetyl-CoA-carboxylase] ligase region; This model represents the ...
975-1196 4.74e-21

birA, biotin-[acetyl-CoA-carboxylase] ligase region; This model represents the biotin--acetyl-CoA-carboxylase ligase region of biotin--acetyl-CoA-carboxylase ligase. In Escherichia coli and some other species, this enzyme is part of a bifunction protein BirA that includes a small, N-terminal biotin operon repressor domain. Proteins identified by this model should not be called bifunctional unless they are also identified by birA_repr_reg (TIGR00122). The protein name suggests that this enzyme transfers biotin only to acetyl-CoA-carboxylase but it also transfers the biotin moiety to other proteins. The apparent orthologs among the eukaryotes are larger proteins that contain a single copy of this domain. [Protein fate, Protein modification and repair]


Pssm-ID: 272917 [Multi-domain]  Cd Length: 237  Bit Score: 93.62  E-value: 4.74e-21
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 212645369   975 DIIESVN------AGIPSLESVVVIANRQISGRGRGGNEFLCPRGMAMFNF--SFSISKKSriakhLPILQHIFCVALVE 1046
Cdd:TIGR00121    6 DVIDSTNqyalelAKEGKLKGDLVVAEYQTAGRGRRGRKWLSPEGGLYFSLilRPDLPKSP-----APGLTLVAGIAIAE 80
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 212645369  1047 AARNLSgypeFPLHIKWPNDLYCErSHKVGGMLLQCSTRDDSFR-VSIGCGMNVSNDKPTMCLNDM---LPKEAETRITK 1122
Cdd:TIGR00121   81 VLKELG----DQVQVKWPNDILLK-DKKLGGILTELTGKENRADyVVIGIGINVQNRKPAESLREQaisLSEEAGIDLDR 155
                          170       180       190       200       210       220       230
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 212645369  1123 EQLIAETINKFTYYMKDYEDNGPETFKKKYHEYWLHSQQEV-LLSDFNERVTI-RGIDDDGYLQVRSKSNPDKIFS 1196
Cdd:TIGR00121  156 GELIEGFLRNFEENLEWFEQEGIDEILSKWEKLSAHIGREVsLTTGNGEIEGIaRGIDKDGALLLEDGGGIKKIIS 231
PRK11886 PRK11886
bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA;
975-1186 9.01e-18

bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA;


Pssm-ID: 237010 [Multi-domain]  Cd Length: 319  Bit Score: 85.61  E-value: 9.01e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 212645369  975 DIIESVNA----GIPSLESV-VVIANRQISGRGRGGNEFLCPRGMamfNFSFSISKKSRI-AKHLPILQHIFCVALVEAA 1048
Cdd:PRK11886   84 PVIDSTNQylldRIAELKSGdLCLAEYQTAGRGRRGRQWFSPFGG---NLYLSLYWRLNQgPAQAMGLSLVVGIAIAEAL 160
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 212645369 1049 RNLsGYPEfpLHIKWPNDLYCeRSHKVGGMLLQCSTR-DDSFRVSIGCGMNVS--------NDKPTMCLNdmlpkEAETR 1119
Cdd:PRK11886  161 RRL-GAID--VGLKWPNDIYL-NDRKLAGILVELSGEtGDAAHVVIGIGINVAmpdfpeelIDQPWSDLQ-----EAGPT 231
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 212645369 1120 ITKEQLIAETINKFTYYMKDYEDNGPETFKKKYHEYWLHSQQEVLLSDFNERV--TIRGIDDDGYLQVR 1186
Cdd:PRK11886  232 IDRNQLAAELIKQLRAALELFEQEGLAPFLERWKKLDLFLGREVKLIIGDKEIsgIARGIDEQGALLLE 300
BPL_LplA_LipB pfam03099
Biotin/lipoate A/B protein ligase family; This family includes biotin protein ligase, ...
971-1098 2.98e-15

Biotin/lipoate A/B protein ligase family; This family includes biotin protein ligase, lipoate-protein ligase A and B. Biotin is covalently attached at the active site of certain enzymes that transfer carbon dioxide from bicarbonate to organic acids to form cellular metabolites. Biotin protein ligase (BPL) is the enzyme responsible for attaching biotin to a specific lysine at the active site of biotin enzymes. Each organizm probably has only one BPL. Biotin attachment is a two step reaction that results in the formation of an amide linkage between the carboxyl group of biotin and the epsilon-amino group of the modified lysine. Lipoate-protein ligase A (LPLA) catalyzes the formation of an amide linkage between lipoic acid and a specific lysine residue in lipoate dependent enzymes. The unusual biosynthesis pathway of lipoic acid is mechanistically intertwined with attachment of the cofactor.


Pssm-ID: 427135  Cd Length: 132  Bit Score: 73.63  E-value: 2.98e-15
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 212645369   971 TTTMDIIESVNagIPSLES-VVVIANRQISGRGRGGNEFLCPRGMAMFNFSFSISKKSRIAKHLPILQHIFCVALVEAAR 1049
Cdd:pfam03099    6 KSTNTYLEELN--SSELESgGVVVVRRQTGGRGRGGNVWHSPKGCLTYSLLLSKEHPNVDPSVLEFYVLELVLAVLEALG 83
                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|.
gi 212645369  1050 N-LSGYPEFPLHIKWPNDLYCErSHKVGGmLLQCSTRD-DSFRVSIGCGMN 1098
Cdd:pfam03099   84 LyKPGISGIPCFVKWPNDLYVN-GRKLAG-ILQRSTRGgTLHHGVIGLGVN 132
PRK08330 PRK08330
biotin--protein ligase; Provisional
960-1104 4.96e-10

biotin--protein ligase; Provisional


Pssm-ID: 169384 [Multi-domain]  Cd Length: 236  Bit Score: 61.30  E-value: 4.96e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 212645369  960 IGQVVLLVDVATTTMDIIESVNAGIPslESVVVIANRQISGRGRGGNEFLCPRG---MAMfnfsfsISKKSRIAKHLPIL 1036
Cdd:PRK08330    1 IGRNIIYFDEVDSTNEYAKRIAPDEE--EGTVIVADRQTAGHGRKGRAWASPEGglwMSV------ILKPKVSPEHLPKL 72
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 212645369 1037 QHIFCVALVEAARNLSgypeFPLHIKWPNDLYCErSHKVGGMLLQCStrddSFRVSIGCGMNVSNDKP 1104
Cdd:PRK08330   73 VFLGALAVVDTLREFG----IEGKIKWPNDVLVN-YKKIAGVLVEGK----GDFVVLGIGLNVNNEIP 131
PTZ00276 PTZ00276
biotin/lipoate protein ligase; Provisional
966-1100 2.39e-09

biotin/lipoate protein ligase; Provisional


Pssm-ID: 140302 [Multi-domain]  Cd Length: 245  Bit Score: 59.49  E-value: 2.39e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 212645369  966 LVDVATTTMDIIESVNAGIPSlESVVVIANRQISGRGRGGNEFLCPRGmAMFnFSFSISKKSRIAKHLPILQHIfcVALV 1045
Cdd:PTZ00276   11 FVGEVTSTMDVARTMLAAAGG-KPFAVLAESQTAGRGTGGRTWTSPKG-NMY-FTLCIPQKGVPPELVPVLPLI--TGLA 85
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 212645369 1046 EAARNLSGYPEFPLHIKWPND-LYCERshKVGGMLLQCstrdDSFRVSIGCGMNVS 1100
Cdd:PTZ00276   86 CRAAIMEVLHGAAVHTKWPNDiIYAGK--KIGGSLIES----EGEYLIIGIGMNIE 135
BirA COG1654
Biotin operon repressor [Transcription];
951-1181 7.44e-09

Biotin operon repressor [Transcription];


Pssm-ID: 441260 [Multi-domain]  Cd Length: 324  Bit Score: 58.84  E-value: 7.44e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 212645369  951 LYFEQIH-----SKIGQVVLLVDVATTTMDIiESVNAGIPSLESVVVIANRQISGRGRGGNEflcPRGMAMFNFSFSISK 1025
Cdd:COG1654    66 LDPEEIRaglstKRLGREILYVISSTSTNLL-ALELAAQGGDAGTVVAAEQQRGGRGRRRRS---WSSPGGGGLLYSLLL 141
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 212645369 1026 KSRIAkhLPILQHIFCVALVEAARNLSGYPEFPLHIKWPNDLYCERsHKVGGMLLQCSTRDDSFRVSIGCGMNVSNDKPT 1105
Cdd:COG1654   142 RPPIA--PALLSLLLLAAAVAVAAALAEGGGLVKWKKWPNDLLKKG-KKILGILEEEGGDADGVVIVVGGGGNNNNSNPE 218
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 212645369 1106 M------CLNDMLPKEAETRITKEQLIAETINKFTYYMKDYEDNGPETFKKKYHEYWLHSQQEVLLSDFNERVTIRGIDD 1179
Cdd:COG1654   219 EepqelaELATSLLLILRLRLLRLLLLLLLLLLELLELLGFLEFFFLWERLDWELLRVLKLVVVVVEIGGGGGGGGALGG 298

                  ..
gi 212645369 1180 DG 1181
Cdd:COG1654   299 GL 300
PRK13325 PRK13325
bifunctional biotin--[acetyl-CoA-carboxylase] ligase/type III pantothenate kinase;
962-1196 2.21e-05

bifunctional biotin--[acetyl-CoA-carboxylase] ligase/type III pantothenate kinase;


Pssm-ID: 183976 [Multi-domain]  Cd Length: 592  Bit Score: 48.55  E-value: 2.21e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 212645369  962 QVVLLVDVATTTMDIIESVNAGIPSLESVVVIANRQISGRGRGGNEFLCPRGMA-MFNFSFSISKKSRIAKHLPILQHIF 1040
Cdd:PRK13325   83 QTALKHECASSNDEILELARIAPDKAHKTICVTHLQSKGRGRQGRKWSHRLGEClMFSFGWVFDRPQYELGSLSPVAAVA 162
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 212645369 1041 CvalveaaRNLSGYPEFPLHIKWPNDLYCERShKVGGMLLQCSTRDDSFRVSIGCGMN------VSNDKPTMCLNDMLPK 1114
Cdd:PRK13325  163 C-------RRALSRLGLKTQIKWPNDLVVGRD-KLGGILIETVRTGGKTVAVVGIGINfvlpkeVENAASVQSLFQTASR 234
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 212645369 1115 E--AETRITKEQLIAEtinkFTYYMKDYEDNGPETFKKKYHEYWLHSQQEVLLSDFNERV---TIRGIDDDGYLQVRSKS 1189
Cdd:PRK13325  235 RgnADAAVLLETLLAE----LDAVLLQYARDGFAPFVAEYQAANRDHGKAVLLLRDGETVfegTVKGVDGQGVLHLETAE 310

                  ....*..
gi 212645369 1190 NPDKIFS 1196
Cdd:PRK13325  311 GKQTVVS 317
PRK06955 PRK06955
biotin--[acetyl-CoA-carboxylase] ligase;
991-1183 1.14e-04

biotin--[acetyl-CoA-carboxylase] ligase;


Pssm-ID: 235896 [Multi-domain]  Cd Length: 300  Bit Score: 45.54  E-value: 1.14e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 212645369  991 VVIANRQISGRGRGGNEFLCPRGMAMfnfSFSIS-KKSRIAKHLPILQHIFCVALVEAARNLSGYPEFPLHIKWPNDLYC 1069
Cdd:PRK06955   67 VRVAYEQTAGRGRQGRPWFAQPGNAL---LFSVAcVLPRPVAALAGLSLAVGVALAEALAALPAALGQRIALKWPNDLLI 143
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 212645369 1070 ERShKVGGMLLQCS-TRDDSFRVSIGCGMNVSNDKPTMCLNDM-----------LPKEAETRITKE----QLIAETINKF 1133
Cdd:PRK06955  144 AGR-KLAGILIETVwATPDATAVVIGIGLNVRRADAVAAEVDAlrareaalargLPPVALAAACAGanltDTLAAALNAL 222
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|...
gi 212645369 1134 TYYMKDYEDNGPETFKKKYHEYWLHSQQEV-LLSDFNERV--TIRGIDDDGYL 1183
Cdd:PRK06955  223 APALQAFGADGLAPFAARWHALHAYAGREVvLLEDGAELArgVAHGIDETGQL 275
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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