|
Name |
Accession |
Description |
Interval |
E-value |
| Bromo_brd8_like |
cd05507 |
Bromodomain, brd8_like subgroup. In mammals, brd8 (bromodomain containing 8) interacts with ... |
642-744 |
1.66e-44 |
|
Bromodomain, brd8_like subgroup. In mammals, brd8 (bromodomain containing 8) interacts with the thyroid hormone receptor in a ligand-dependent fashion and enhances thyroid hormone-dependent activation from thyroid response elements. Brd8 is thought to be a nuclear receptor coactivator. Bromodomains are 110 amino acid long domains, that are found in many chromatin associated proteins. Bromodomains can interact specifically with acetylated lysine.
Pssm-ID: 99939 Cd Length: 104 Bit Score: 155.21 E-value: 1.66e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17534575 642 EDTTKLKLLAMYRYLHDCEWSEAFKKPVPL-GEATYDQGVLERIDLSLIKKEIDNGTINSESGFLLRAYRMLSNAIMYNG 720
Cdd:cd05507 1 YRAWKKAILLVYRTLASHRYASVFLKPVTEdIAPGYHSVVYRPMDLSTIKKNIENGTIRSTAEFQRDVLLMFQNAIMYNS 80
|
90 100
....*....|....*....|....
gi 17534575 721 YDHDVHLHAKYIIEHVMNDIHTLN 744
Cdd:cd05507 81 SDHDVYLMAVEMQREVMSQIQQLL 104
|
|
| BROMO |
smart00297 |
bromo domain; |
646-743 |
1.80e-19 |
|
bromo domain;
Pssm-ID: 197636 [Multi-domain] Cd Length: 107 Bit Score: 84.25 E-value: 1.80e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17534575 646 KLKLLAMYRYLHDCEWSEAFKKPVPLGEA-TYDQGVLERIDLSLIKKEIDNGTINSESGFLLRAYRMLSNAIMYNGYDHD 724
Cdd:smart00297 9 QELLKAVLDKLDSHPLSWPFLKPVSRKEApDYYDIIKKPMDLKTIKKKLENGKYSSVEEFVADFNLMFSNARTYNGPDSE 88
|
90
....*....|....*....
gi 17534575 725 VHLHAKYIIEHVMNDIHTL 743
Cdd:smart00297 89 VYKDAKKLEKFFEKKLREL 107
|
|
| Bromodomain |
pfam00439 |
Bromodomain; Bromodomains are 110 amino acid long domains, that are found in many chromatin ... |
662-731 |
4.16e-09 |
|
Bromodomain; Bromodomains are 110 amino acid long domains, that are found in many chromatin associated proteins. Bromodomains can interact specifically with acetylated lysine.
Pssm-ID: 425683 [Multi-domain] Cd Length: 84 Bit Score: 53.86 E-value: 4.16e-09
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 17534575 662 SEAFKKPVPLGEA-TYDQGVLERIDLSLIKKEIDNGTINSESGFLLRAYRMLSNAIMYNGYDHDVHLHAKY 731
Cdd:pfam00439 14 AAPFLEPVDPDEYpDYYSVIKKPMDLSTIKKKLENGEYKSLAEFLADVKLIFSNARTYNGPGSVIYKAAEK 84
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
180-530 |
7.02e-07 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 53.25 E-value: 7.02e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17534575 180 PPTKPPGDDVTTGSRGFLTPTHSTPALDMSFFTPPRQMRTLADAVREAAPVEVIPEFVEPDPPVQDALPDEIMEPVSLTP 259
Cdd:PHA03307 67 PPTGPPPGPGTEAPANESRSTPTWSLSTLAPASPAREGSPTPPGPSSPDPPPPTPPPASPPPSPAPDLSEMLRPVGSPGP 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17534575 260 IKKPKTEKEPEKEIP-ASEPVSSPKKSVIPASPKAISHPSTPAKSPqktpqkkkeitpvevkieeikeeeDVTPSQSPPA 338
Cdd:PHA03307 147 PPAASPPAAGASPAAvASDAASSRQAALPLSSPEETARAPSSPPAE------------------------PPPSTPPAAA 202
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17534575 339 TQTPRSRGRPRIHSSASkktekPETPRAESPDPLPPPPSKKRPKEPSQEPSTNTSSKRPRTSTVVPMITRRRKEGTPHSR 418
Cdd:PHA03307 203 SPRPPRRSSPISASASS-----PAPAPGRSAADDAGASSSDSSSSESSGCGWGPENECPLPRPAPITLPTRIWEASGWNG 277
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17534575 419 MSSVPPIARSESSFDFQTAPASPMDTSTREIEVQTDIT-IRQAVQAVSMGERRRSHIPPVTRKVRKSMMPSESiRSVSRN 497
Cdd:PHA03307 278 PSSRPGPASSSSSPRERSPSPSPSSPGSGPAPSSPRASsSSSSSRESSSSSTSSSSESSRGAAVSPGPSPSRS-PSPSRP 356
|
330 340 350
....*....|....*....|....*....|...
gi 17534575 498 SSTSTPGPRGSSVVPNAMRSQGMQTNIRLDIEK 530
Cdd:PHA03307 357 PPPADPSSPRKRPRPSRAPSSPAASAGRPTRRR 389
|
|
| PspC_subgroup_2 |
NF033839 |
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, ... |
231-404 |
1.31e-04 |
|
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site. The other form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A.
Pssm-ID: 468202 [Multi-domain] Cd Length: 557 Bit Score: 45.53 E-value: 1.31e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17534575 231 EVIPEFVEPDPPVQDALPDEIMEPVSLTPIKKPKTEKEPEKEIPASEP-VSSPKKSVIPA----SPKAISHPSTPAKSPQ 305
Cdd:NF033839 309 EVKPEPETPKPEVKPQLEKPKPEVKPQPEKPKPEVKPQLETPKPEVKPqPEKPKPEVKPQpekpKPEVKPQPETPKPEVK 388
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17534575 306 KTPQKKK-EITPVEVKIEEIKEEEDVTPSQS-PPATQTPRSRGRPRIHSSASKKTEKPETPRAESPDPLPPPPSKKRPKE 383
Cdd:NF033839 389 PQPEKPKpEVKPQPEKPKPEVKPQPEKPKPEvKPQPEKPKPEVKPQPEKPKPEVKPQPEKPKPEVKPQPETPKPEVKPQP 468
|
170 180
....*....|....*....|.
gi 17534575 384 PSQEPSTNTSSKRPRTSTVVP 404
Cdd:NF033839 469 EKPKPEVKPQPEKPKPDNSKP 489
|
|
| 2A1904 |
TIGR00927 |
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying ... |
210-522 |
8.55e-03 |
|
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273344 [Multi-domain] Cd Length: 1096 Bit Score: 39.98 E-value: 8.55e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17534575 210 FFTPPRQMRTLADAVREAAPVEVipefvepdpPVQDALPDEIMEPVSLTPIKKPKTEKE---PEKEIPASEPVSSPKKSV 286
Cdd:TIGR00927 40 HLRRPQGLPSLWAAVSSQQPIKL---------ASRDLSNDEMMMVSSDPPKSSSEMEGEmlaPQATVGRDEATPSIAMEN 110
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17534575 287 IPASPKAISH--PSTPAKSPQKTP---QKKKEITPVevkieeikeeedvTPSQSPpaTQTPRSRGRPRIHS--SASKKTE 359
Cdd:TIGR00927 111 TPSPPRRTAKitPTTPKNNYSPTAagtERVKEDTPA-------------TPSRAL--NHYISTSGRQRVKSytPKPRGEV 175
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17534575 360 KPETPRAESPDPLPPPPSKKRPKEPSQEPSTNTSSkrPRTSTVVPMITRRRKEGTPHSRMSSVPPIARSESSFDFQTAPA 439
Cdd:TIGR00927 176 KSSSPTQTREKVRKYTPSPLGRMVNSYAPSTFMTM--PRSHGITPRTTVKDSEITATYKMLETNPSKRTAGKTTPTPLKG 253
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17534575 440 SPMDTST---REIEVQTDITIRQAVQAVSMGERRRshippvtrkvrksmmpsesirsVSRNSSTSTPG---------PRG 507
Cdd:TIGR00927 254 MTDNTPTfltREVETDLLTSPRSVVEKNTLTTPRR----------------------VESNSSTNHWGlvgknnlttPQG 311
|
330
....*....|....*
gi 17534575 508 SSVVPNAMRSQGMQT 522
Cdd:TIGR00927 312 TVLEHTPATSEGQVT 326
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| Bromo_brd8_like |
cd05507 |
Bromodomain, brd8_like subgroup. In mammals, brd8 (bromodomain containing 8) interacts with ... |
642-744 |
1.66e-44 |
|
Bromodomain, brd8_like subgroup. In mammals, brd8 (bromodomain containing 8) interacts with the thyroid hormone receptor in a ligand-dependent fashion and enhances thyroid hormone-dependent activation from thyroid response elements. Brd8 is thought to be a nuclear receptor coactivator. Bromodomains are 110 amino acid long domains, that are found in many chromatin associated proteins. Bromodomains can interact specifically with acetylated lysine.
Pssm-ID: 99939 Cd Length: 104 Bit Score: 155.21 E-value: 1.66e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17534575 642 EDTTKLKLLAMYRYLHDCEWSEAFKKPVPL-GEATYDQGVLERIDLSLIKKEIDNGTINSESGFLLRAYRMLSNAIMYNG 720
Cdd:cd05507 1 YRAWKKAILLVYRTLASHRYASVFLKPVTEdIAPGYHSVVYRPMDLSTIKKNIENGTIRSTAEFQRDVLLMFQNAIMYNS 80
|
90 100
....*....|....*....|....
gi 17534575 721 YDHDVHLHAKYIIEHVMNDIHTLN 744
Cdd:cd05507 81 SDHDVYLMAVEMQREVMSQIQQLL 104
|
|
| BROMO |
smart00297 |
bromo domain; |
646-743 |
1.80e-19 |
|
bromo domain;
Pssm-ID: 197636 [Multi-domain] Cd Length: 107 Bit Score: 84.25 E-value: 1.80e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17534575 646 KLKLLAMYRYLHDCEWSEAFKKPVPLGEA-TYDQGVLERIDLSLIKKEIDNGTINSESGFLLRAYRMLSNAIMYNGYDHD 724
Cdd:smart00297 9 QELLKAVLDKLDSHPLSWPFLKPVSRKEApDYYDIIKKPMDLKTIKKKLENGKYSSVEEFVADFNLMFSNARTYNGPDSE 88
|
90
....*....|....*....
gi 17534575 725 VHLHAKYIIEHVMNDIHTL 743
Cdd:smart00297 89 VYKDAKKLEKFFEKKLREL 107
|
|
| Bromodomain |
cd04369 |
Bromodomain. Bromodomains are found in many chromatin-associated proteins and in nuclear ... |
649-740 |
1.04e-10 |
|
Bromodomain. Bromodomains are found in many chromatin-associated proteins and in nuclear histone acetyltransferases. They interact specifically with acetylated lysine.
Pssm-ID: 99922 [Multi-domain] Cd Length: 99 Bit Score: 58.92 E-value: 1.04e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17534575 649 LLAMYRYLHDCewSEAFKKPVPLGEAT-YDQGVLERIDLSLIKKEIDNGTINSESGFLLRAYRMLSNAIMYNGYDHDVHL 727
Cdd:cd04369 9 LDALKKLKRDL--SEPFLEPVDPKEAPdYYEVIKNPMDLSTIKKKLKNGEYKSLEEFEADVRLIFSNAKTYNGPGSPIYK 86
|
90
....*....|...
gi 17534575 728 HAKYIIEHVMNDI 740
Cdd:cd04369 87 DAKKLEKLFEKLL 99
|
|
| Bromodomain |
pfam00439 |
Bromodomain; Bromodomains are 110 amino acid long domains, that are found in many chromatin ... |
662-731 |
4.16e-09 |
|
Bromodomain; Bromodomains are 110 amino acid long domains, that are found in many chromatin associated proteins. Bromodomains can interact specifically with acetylated lysine.
Pssm-ID: 425683 [Multi-domain] Cd Length: 84 Bit Score: 53.86 E-value: 4.16e-09
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 17534575 662 SEAFKKPVPLGEA-TYDQGVLERIDLSLIKKEIDNGTINSESGFLLRAYRMLSNAIMYNGYDHDVHLHAKY 731
Cdd:pfam00439 14 AAPFLEPVDPDEYpDYYSVIKKPMDLSTIKKKLENGEYKSLAEFLADVKLIFSNARTYNGPGSVIYKAAEK 84
|
|
| Bromo_RACK7 |
cd05508 |
Bromodomain, RACK7_like subfamily. RACK7 (also called human protein kinase C-binding protein) ... |
659-734 |
1.51e-08 |
|
Bromodomain, RACK7_like subfamily. RACK7 (also called human protein kinase C-binding protein) was identified as a potential tumor suppressor genes, it shares domain architecture with BS69/ZMYND11; both have been implicated in the regulation of cellular proliferation. Bromodomains are 110 amino acid long domains, that are found in many chromatin associated proteins. Bromodomains can interact specifically with acetylated lysine.
Pssm-ID: 99940 Cd Length: 99 Bit Score: 52.77 E-value: 1.51e-08
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 17534575 659 CEWSEAFKKPVPLGEA-TYDQGVLERIDLSLIKKEIDNGTINSESGFLLRAYRMLSNAIMYNGYDHDVHLHAKYIIE 734
Cdd:cd05508 17 QPGAEPFLKPVDLEQFpDYAQYVFKPMDLSTLEKNVRKKAYGSTDAFLADAKWILHNAIIYNGGDHKLTQAAKAIVK 93
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
180-530 |
7.02e-07 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 53.25 E-value: 7.02e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17534575 180 PPTKPPGDDVTTGSRGFLTPTHSTPALDMSFFTPPRQMRTLADAVREAAPVEVIPEFVEPDPPVQDALPDEIMEPVSLTP 259
Cdd:PHA03307 67 PPTGPPPGPGTEAPANESRSTPTWSLSTLAPASPAREGSPTPPGPSSPDPPPPTPPPASPPPSPAPDLSEMLRPVGSPGP 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17534575 260 IKKPKTEKEPEKEIP-ASEPVSSPKKSVIPASPKAISHPSTPAKSPqktpqkkkeitpvevkieeikeeeDVTPSQSPPA 338
Cdd:PHA03307 147 PPAASPPAAGASPAAvASDAASSRQAALPLSSPEETARAPSSPPAE------------------------PPPSTPPAAA 202
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17534575 339 TQTPRSRGRPRIHSSASkktekPETPRAESPDPLPPPPSKKRPKEPSQEPSTNTSSKRPRTSTVVPMITRRRKEGTPHSR 418
Cdd:PHA03307 203 SPRPPRRSSPISASASS-----PAPAPGRSAADDAGASSSDSSSSESSGCGWGPENECPLPRPAPITLPTRIWEASGWNG 277
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17534575 419 MSSVPPIARSESSFDFQTAPASPMDTSTREIEVQTDIT-IRQAVQAVSMGERRRSHIPPVTRKVRKSMMPSESiRSVSRN 497
Cdd:PHA03307 278 PSSRPGPASSSSSPRERSPSPSPSSPGSGPAPSSPRASsSSSSSRESSSSSTSSSSESSRGAAVSPGPSPSRS-PSPSRP 356
|
330 340 350
....*....|....*....|....*....|...
gi 17534575 498 SSTSTPGPRGSSVVPNAMRSQGMQTNIRLDIEK 530
Cdd:PHA03307 357 PPPADPSSPRKRPRPSRAPSSPAASAGRPTRRR 389
|
|
| PTZ00449 |
PTZ00449 |
104 kDa microneme/rhoptry antigen; Provisional |
261-453 |
1.50e-06 |
|
104 kDa microneme/rhoptry antigen; Provisional
Pssm-ID: 185628 [Multi-domain] Cd Length: 943 Bit Score: 52.00 E-value: 1.50e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17534575 261 KKPKTEKEPE---KEIPASE--PVSSPKKSVIPASPKAISHPSTPaKSPQKTPQKKKEITPVEVKIEEIKEEEDVTPSQS 335
Cdd:PTZ00449 547 GKPGETKEGEvgkKPGPAKEhkPSKIPTLSKKPEFPKDPKHPKDP-EEPKKPKRPRSAQRPTRPKSPKLPELLDIPKSPK 625
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17534575 336 PPATQTPRSRGRPRIHSSASKKTEKPETPRAESPDPLPPPPSKKRPKEPSQEPSTNTSSKRPRTSTVVPMI--------- 406
Cdd:PTZ00449 626 RPESPKSPKRPPPPQRPSSPERPEGPKIIKSPKPPKSPKPPFDPKFKEKFYDDYLDAAAKSKETKTTVVLDesfesilke 705
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 17534575 407 TRRRKEGTPHSRMSSVPPIARSESSFDFqTAPASPMDTSTREIEVQT 453
Cdd:PTZ00449 706 TLPETPGTPFTTPRPLPPKLPRDEEFPF-EPIGDPDAEQPDDIEFFT 751
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
161-509 |
3.88e-05 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 47.63 E-value: 3.88e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17534575 161 AIAGRLEAEGSLNLETLVLPPTKPPgDDVTTGSRGFLTPTHSTPALDMSFFTPPRQMRtladavREAAPVEVIPEFVEPD 240
Cdd:PHA03247 2628 PPSPSPAANEPDPHPPPTVPPPERP-RDDPAPGRVSRPRRARRLGRAAQASSPPQRPR------RRAARPTVGSLTSLAD 2700
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17534575 241 PPVQDALPDEIMEP-VSLTPIKK-PKTEKEPEKEIPASE-PVSSPKKSVIPASPKAISHPSTPAKSPQKTPQKKKEITPV 317
Cdd:PHA03247 2701 PPPPPPTPEPAPHAlVSATPLPPgPAAARQASPALPAAPaPPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPP 2780
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17534575 318 EVKIEEIKEEEDVTPSQSP--------PATQTPRSRGRPRIHSSASKkTEKPETPRAESPDPLPPPPSKKRPKEPSQEPS 389
Cdd:PHA03247 2781 RRLTRPAVASLSESRESLPspwdpadpPAAVLAPAAALPPAASPAGP-LPPPTSAQPTAPPPPPGPPPPSLPLGGSVAPG 2859
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17534575 390 TNTSSKRPRTSTVVPMITRRRkegtPHSRMSSVPPIARSESSFDFQ----------TAPASPMDTSTREIEVQ------- 452
Cdd:PHA03247 2860 GDVRRRPPSRSPAAKPAAPAR----PPVRRLARPAVSRSTESFALPpdqperppqpQAPPPPQPQPQPPPPPQpqppppp 2935
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 17534575 453 -----------TDITIRQAVQAVSMGERRRSHIP---PVTRKVRKSMMPSESIRSVSRNSSTSTPGPRGSS 509
Cdd:PHA03247 2936 pprpqpplaptTDPAGAGEPSGAVPQPWLGALVPgrvAVPRFRVPQPAPSREAPASSTPPLTGHSLSRVSS 3006
|
|
| PspC_subgroup_2 |
NF033839 |
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, ... |
231-404 |
1.31e-04 |
|
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site. The other form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A.
Pssm-ID: 468202 [Multi-domain] Cd Length: 557 Bit Score: 45.53 E-value: 1.31e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17534575 231 EVIPEFVEPDPPVQDALPDEIMEPVSLTPIKKPKTEKEPEKEIPASEP-VSSPKKSVIPA----SPKAISHPSTPAKSPQ 305
Cdd:NF033839 309 EVKPEPETPKPEVKPQLEKPKPEVKPQPEKPKPEVKPQLETPKPEVKPqPEKPKPEVKPQpekpKPEVKPQPETPKPEVK 388
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17534575 306 KTPQKKK-EITPVEVKIEEIKEEEDVTPSQS-PPATQTPRSRGRPRIHSSASKKTEKPETPRAESPDPLPPPPSKKRPKE 383
Cdd:NF033839 389 PQPEKPKpEVKPQPEKPKPEVKPQPEKPKPEvKPQPEKPKPEVKPQPEKPKPEVKPQPEKPKPEVKPQPETPKPEVKPQP 468
|
170 180
....*....|....*....|.
gi 17534575 384 PSQEPSTNTSSKRPRTSTVVP 404
Cdd:NF033839 469 EKPKPEVKPQPEKPKPDNSKP 489
|
|
| Bromo_Brdt_II_like |
cd05498 |
Bromodomain, Brdt_like subfamily, repeat II. Human Brdt is a testis-specific member of the BET ... |
665-730 |
2.76e-04 |
|
Bromodomain, Brdt_like subfamily, repeat II. Human Brdt is a testis-specific member of the BET subfamily of bromodomain proteins; the first bromodomain in Brdt has been shown to be essential for male germ cell differentiation. Bromodomains are 110 amino acid long domains, that are found in many chromatin associated proteins. Bromodomains can interact specifically with acetylated lysine.
Pssm-ID: 99930 Cd Length: 102 Bit Score: 40.72 E-value: 2.76e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 17534575 665 FKKPV---PLGEATYDQGVLERIDLSLIKKEIDNGTINSESGFLLRAYRMLSNAIMYNGYDHDVHLHAK 730
Cdd:cd05498 24 FYKPVdpeALGLHDYHDIIKHPMDLSTIKKKLDNREYADAQEFAADVRLMFSNCYKYNPPDHPVHAMAR 92
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
199-514 |
1.10e-03 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 43.00 E-value: 1.10e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17534575 199 PTHSTPALDMSFF--TPPRQMRTLADAVREAAPVEVIPE-FVEPDPPVQDALPdeimePVSLTPIK-----KPKTEKEPE 270
Cdd:PHA03247 2478 PVYRRPAEARFPFaaGAAPDPGGGGPPDPDAPPAPSRLApAILPDEPVGEPVH-----PRMLTWIRgleelASDDAGDPP 2552
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17534575 271 KEIPASEPVSSPKKSVIPasPKAISHPSTPA-----KSPQKTPQKKKEITPVEVKIEEIKEEEdvtPSQSPPATQ----- 340
Cdd:PHA03247 2553 PPLPPAAPPAAPDRSVPP--PRPAPRPSEPAvtsraRRPDAPPQSARPRAPVDDRGDPRGPAP---PSPLPPDTHapdpp 2627
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17534575 341 --TPRSRGRPRIHSSASkKTEKPETPRAESPDPLPPPPSKKRPKEPSQEPSTNTSSKRPR---------TSTVVPMITRR 409
Cdd:PHA03247 2628 ppSPSPAANEPDPHPPP-TVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSPPQRPRRRaarptvgslTSLADPPPPPP 2706
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17534575 410 RKEGTPHSRMSSVP-PIARSESSFDFQTAPASPMDTSTREIEVQTDITIRQAVQAVSMGERRRSH-IPPVTRKVRKSMMP 487
Cdd:PHA03247 2707 TPEPAPHALVSATPlPPGPAAARQASPALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPAPpAAPAAGPPRRLTRP 2786
|
330 340
....*....|....*....|....*..
gi 17534575 488 SESIRSVSRNSSTSTPGPRGSSVVPNA 514
Cdd:PHA03247 2787 AVASLSESRESLPSPWDPADPPAAVLA 2813
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
180-454 |
6.19e-03 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 40.31 E-value: 6.19e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17534575 180 PPTKP--PGDDVTTGSRGFL-TPTHSTPALDMSFFTPPRQMRTLADAVREAAPVevIPEFVEPDPPVQDALPDEIMEPVS 256
Cdd:PHA03247 2744 VPAGPatPGGPARPARPPTTaGPPAPAPPAAPAAGPPRRLTRPAVASLSESRES--LPSPWDPADPPAAVLAPAAALPPA 2821
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17534575 257 LTP--IKKPKTEKEPEKEIPASEPVSSPKK---SVIPASPKAISHPSTPAKSPQKTPQKKKeITPVEVKIEEIKEEEDVT 331
Cdd:PHA03247 2822 ASPagPLPPPTSAQPTAPPPPPGPPPPSLPlggSVAPGGDVRRRPPSRSPAAKPAAPARPP-VRRLARPAVSRSTESFAL 2900
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17534575 332 PSQSPPATQTPRSRGRPRIHSSAskktEKPETPRAESPDPLPPPPSKKRPKEPSQEPSTNTSSKRPRTSTVVP---MITR 408
Cdd:PHA03247 2901 PPDQPERPPQPQAPPPPQPQPQP----PPPPQPQPPPPPPPRPQPPLAPTTDPAGAGEPSGAVPQPWLGALVPgrvAVPR 2976
|
250 260 270 280
....*....|....*....|....*....|....*....|....*.
gi 17534575 409 RRkegTPHSRmSSVPPIARSESSFDFQTAPASPMDTSTREIEVQTD 454
Cdd:PHA03247 2977 FR---VPQPA-PSREAPASSTPPLTGHSLSRVSSWASSLALHEETD 3018
|
|
| PTZ00449 |
PTZ00449 |
104 kDa microneme/rhoptry antigen; Provisional |
239-513 |
6.83e-03 |
|
104 kDa microneme/rhoptry antigen; Provisional
Pssm-ID: 185628 [Multi-domain] Cd Length: 943 Bit Score: 40.06 E-value: 6.83e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17534575 239 PDPPVQDALPDEIMEPVSLtpiKKPKTEKEPEKEIPASEPVS--SPKKSVIPASPKAISHPSTP-------------AKS 303
Cdd:PTZ00449 606 PTRPKSPKLPELLDIPKSP---KRPESPKSPKRPPPPQRPSSpeRPEGPKIIKSPKPPKSPKPPfdpkfkekfyddyLDA 682
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17534575 304 PQKTPQKKKEITPVEVKIEEIKEEEDVTPSqSPPATQTPRSRGRPRIHSSASKKTEKPETPRAESPDPLPPPPSKK---- 379
Cdd:PTZ00449 683 AAKSKETKTTVVLDESFESILKETLPETPG-TPFTTPRPLPPKLPRDEEFPFEPIGDPDAEQPDDIEFFTPPEEERtffh 761
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17534575 380 -----------------RPKEPSQEPSTNTSSKRPRTST-----------VVPMiTRRRKEG---------TPHSRMSSV 422
Cdd:PTZ00449 762 etpadtplpdilaeefkEEDIHAETGEPDEAMKRPDSPSehedkppgdhpSLPK-KRHRLDGlalsttdleSDAGRIAKD 840
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17534575 423 PP-----IARSESSFDFQTAPASP-MDTSTREIEVQTDITIRQAVQAVSMGERRRSHIppvtRKVRKSMMPSESIRSvsr 496
Cdd:PTZ00449 841 ASgkivkLKRSKSFDDLTTVEEAEeMGAEARKIVVDDDGTEADDEDTHPPEEKHKSEV----RRRRPPKKPSKPKKP--- 913
|
330
....*....|....*..
gi 17534575 497 nSSTSTPGPRGSSVVPN 513
Cdd:PTZ00449 914 -SKPKKPKKPDSAFIPS 929
|
|
| PRK10819 |
PRK10819 |
transport protein TonB; Provisional |
226-316 |
7.21e-03 |
|
transport protein TonB; Provisional
Pssm-ID: 236768 [Multi-domain] Cd Length: 246 Bit Score: 38.90 E-value: 7.21e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17534575 226 EAAPVEVIPE-FVEPDPpvqdaLPDEIMEPVSLTPIKKPKTEKEPE-KEIPASEPVSS----PKKSVIPASPKAISH-PS 298
Cdd:PRK10819 60 PPQAVQPPPEpVVEPEP-----EPEPIPEPPKEAPVVIPKPEPKPKpKPKPKPKPVKKveeqPKREVKPVEPRPASPfEN 134
|
90
....*....|....*...
gi 17534575 299 TPAKSPQKTPQKKKEITP 316
Cdd:PRK10819 135 TAPARPTSSTATAAASKP 152
|
|
| Bromo_BDF1_2_I |
cd05500 |
Bromodomain. BDF1/BDF2 like subfamily, restricted to fungi, repeat I. BDF1 and BDF2 are yeast ... |
656-730 |
7.44e-03 |
|
Bromodomain. BDF1/BDF2 like subfamily, restricted to fungi, repeat I. BDF1 and BDF2 are yeast transcription factors involved in the expression of a wide range of genes, including snRNAs; they are required for sporulation and DNA repair and protect histone H4 from deacetylation. Bromodomains are 110 amino acid long domains, that are found in many chromatin associated proteins. Bromodomains can interact specifically with acetylated lysine.
Pssm-ID: 99932 Cd Length: 103 Bit Score: 36.91 E-value: 7.44e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 17534575 656 LHDcewSEAFKKPV---PLGEATYDQGVLERIDLSLIKKEIDNGTINSESGFLLRAYRMLSNAIMYNGYDHDVHLHAK 730
Cdd:cd05500 19 LKD---ARPFLVPVdpvKLNIPHYPTIIKKPMDLGTIERKLKSNVYTSVEEFTADFNLMVDNCLTFNGPEHPVSQMGK 93
|
|
| 2A1904 |
TIGR00927 |
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying ... |
210-522 |
8.55e-03 |
|
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273344 [Multi-domain] Cd Length: 1096 Bit Score: 39.98 E-value: 8.55e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17534575 210 FFTPPRQMRTLADAVREAAPVEVipefvepdpPVQDALPDEIMEPVSLTPIKKPKTEKE---PEKEIPASEPVSSPKKSV 286
Cdd:TIGR00927 40 HLRRPQGLPSLWAAVSSQQPIKL---------ASRDLSNDEMMMVSSDPPKSSSEMEGEmlaPQATVGRDEATPSIAMEN 110
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17534575 287 IPASPKAISH--PSTPAKSPQKTP---QKKKEITPVevkieeikeeedvTPSQSPpaTQTPRSRGRPRIHS--SASKKTE 359
Cdd:TIGR00927 111 TPSPPRRTAKitPTTPKNNYSPTAagtERVKEDTPA-------------TPSRAL--NHYISTSGRQRVKSytPKPRGEV 175
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17534575 360 KPETPRAESPDPLPPPPSKKRPKEPSQEPSTNTSSkrPRTSTVVPMITRRRKEGTPHSRMSSVPPIARSESSFDFQTAPA 439
Cdd:TIGR00927 176 KSSSPTQTREKVRKYTPSPLGRMVNSYAPSTFMTM--PRSHGITPRTTVKDSEITATYKMLETNPSKRTAGKTTPTPLKG 253
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17534575 440 SPMDTST---REIEVQTDITIRQAVQAVSMGERRRshippvtrkvrksmmpsesirsVSRNSSTSTPG---------PRG 507
Cdd:TIGR00927 254 MTDNTPTfltREVETDLLTSPRSVVEKNTLTTPRR----------------------VESNSSTNHWGlvgknnlttPQG 311
|
330
....*....|....*
gi 17534575 508 SSVVPNAMRSQGMQT 522
Cdd:TIGR00927 312 TVLEHTPATSEGQVT 326
|
|
| |
