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Conserved domains on  [gi|193203975|ref|NP_494430|]
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C6 domain-containing protein [Caenorhabditis elegans]

Protein Classification

C6 domain-containing protein( domain architecture ID 10660190)

C6 domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
C6 smart01048
This domain of unknown function is found in a C. elegans protein; It is presumed to be an ...
 516-622 6.35e-16

This domain of unknown function is found in a C. elegans protein; It is presumed to be an extracellular domain. The C6 domain contains six conserved cysteine residues in most copies of the domain. However some copies of the domain are missing cysteine residues 1 and 3 suggesting that these form a disulphide bridge.


:

Pssm-ID: 214994  Cd Length: 98  Bit Score: 73.69  E-value: 6.35e-16
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193203975   516 CNPEAVMLGVGDAnqpQTMVDVTYSDFMSTPIAGTADSTSTMKISCSAI-DGYTVLMQLNAqtiPLEGQFE--PQEVTIT 592
Cdd:smart01048   1 CSSCANLLGVGDN---ATQIDGTYGDFLTTPTIGTATGCSTVTITCSGTsAGDNAYLLFNG---PAENQLDsgPQTVTIT 74

                           90       100       110
                   ....*....|....*....|....*....|
gi 193203975   593 VTCNSaDMTWTYtadagTGPVTIDVNSVRC 622
Cdd:smart01048  75 LTCNS-DGQWVY-----VTTVGTVVTSVSC 98
C6 smart01048
This domain of unknown function is found in a C. elegans protein; It is presumed to be an ...
 166-268 2.30e-12

This domain of unknown function is found in a C. elegans protein; It is presumed to be an extracellular domain. The C6 domain contains six conserved cysteine residues in most copies of the domain. However some copies of the domain are missing cysteine residues 1 and 3 suggesting that these form a disulphide bridge.


:

Pssm-ID: 214994  Cd Length: 98  Bit Score: 63.29  E-value: 2.30e-12
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193203975   166 CDPALITYGVGDDQTPevaIDVTHSAVTTT------AGVSSMTITCSG-ADDFNVQMDLNGaftPVENNLDPPPQTVTIN 238
Cdd:smart01048   1 CSSCANLLGVGDNATQ---IDGTYGDFLTTptigtaTGCSTVTITCSGtSAGDNAYLLFNG---PAENQLDSGPQTVTIT 74

                           90       100       110
                   ....*....|....*....|....*....|
gi 193203975   239 AQCNtADMIWNYVTmvngqPSTQALDSVTC 268
Cdd:smart01048  75 LTCN-SDGQWVYVT-----TVGTVVTSVSC 98
C6 smart01048
This domain of unknown function is found in a C. elegans protein; It is presumed to be an ...
 286-388 2.30e-12

This domain of unknown function is found in a C. elegans protein; It is presumed to be an extracellular domain. The C6 domain contains six conserved cysteine residues in most copies of the domain. However some copies of the domain are missing cysteine residues 1 and 3 suggesting that these form a disulphide bridge.


:

Pssm-ID: 214994  Cd Length: 98  Bit Score: 63.29  E-value: 2.30e-12
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193203975   286 CDPALITYGVGDDQTPevaIDVTHSAVTTT------AGVSSMTITCSG-ADDFNVQMDLNGaftPVENNLDPPPQTVTIN 358
Cdd:smart01048   1 CSSCANLLGVGDNATQ---IDGTYGDFLTTptigtaTGCSTVTITCSGtSAGDNAYLLFNG---PAENQLDSGPQTVTIT 74

                           90       100       110
                   ....*....|....*....|....*....|
gi 193203975   359 AQCNtADMIWNYVTmvngqPSTQALDSVTC 388
Cdd:smart01048  75 LTCN-SDGQWVYVT-----TVGTVVTSVSC 98
C6 smart01048
This domain of unknown function is found in a C. elegans protein; It is presumed to be an ...
 46-148 2.39e-12

This domain of unknown function is found in a C. elegans protein; It is presumed to be an extracellular domain. The C6 domain contains six conserved cysteine residues in most copies of the domain. However some copies of the domain are missing cysteine residues 1 and 3 suggesting that these form a disulphide bridge.


:

Pssm-ID: 214994  Cd Length: 98  Bit Score: 63.29  E-value: 2.39e-12
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193203975    46 CSPDTLVLGQGDNQNPevaIDVTHSAVTTT------AGTSSMTITCSG-ATDFNVQMELNGaftPAENDQDPLPQTVTIN 118
Cdd:smart01048   1 CSSCANLLGVGDNATQ---IDGTYGDFLTTptigtaTGCSTVTITCSGtSAGDNAYLLFNG---PAENQLDSGPQTVTIT 74

                           90       100       110
                   ....*....|....*....|....*....|
gi 193203975   119 AQCNtADMKWNYVTvingeTFTEPLDSVTC 148
Cdd:smart01048  75 LTCN-SDGQWVYVT-----TVGTVVTSVSC 98
C6 smart01048
This domain of unknown function is found in a C. elegans protein; It is presumed to be an ...
 406-508 3.57e-12

This domain of unknown function is found in a C. elegans protein; It is presumed to be an extracellular domain. The C6 domain contains six conserved cysteine residues in most copies of the domain. However some copies of the domain are missing cysteine residues 1 and 3 suggesting that these form a disulphide bridge.


:

Pssm-ID: 214994  Cd Length: 98  Bit Score: 62.90  E-value: 3.57e-12
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193203975   406 CDPALITYGVGDDQTPevaIDVTHSAVTTT------AGVSSMTITCSG-ADDFNVQMDLNGaftPVENNLDPPPQTVTIN 478
Cdd:smart01048   1 CSSCANLLGVGDNATQ---IDGTYGDFLTTptigtaTGCSTVTITCSGtSAGDNAYLLFNG---PAENQLDSGPQTVTIT 74

                           90       100       110
                   ....*....|....*....|....*....|
gi 193203975   479 AQCNtADMIWNYVTmvngqPSTQALDTVTC 508
Cdd:smart01048  75 LTCN-SDGQWVYVT-----TVGTVVTSVSC 98
 
Name Accession Description Interval E-value
C6 smart01048
This domain of unknown function is found in a C. elegans protein; It is presumed to be an ...
 516-622 6.35e-16

This domain of unknown function is found in a C. elegans protein; It is presumed to be an extracellular domain. The C6 domain contains six conserved cysteine residues in most copies of the domain. However some copies of the domain are missing cysteine residues 1 and 3 suggesting that these form a disulphide bridge.


Pssm-ID: 214994  Cd Length: 98  Bit Score: 73.69  E-value: 6.35e-16
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193203975   516 CNPEAVMLGVGDAnqpQTMVDVTYSDFMSTPIAGTADSTSTMKISCSAI-DGYTVLMQLNAqtiPLEGQFE--PQEVTIT 592
Cdd:smart01048   1 CSSCANLLGVGDN---ATQIDGTYGDFLTTPTIGTATGCSTVTITCSGTsAGDNAYLLFNG---PAENQLDsgPQTVTIT 74

                           90       100       110
                   ....*....|....*....|....*....|
gi 193203975   593 VTCNSaDMTWTYtadagTGPVTIDVNSVRC 622
Cdd:smart01048  75 LTCNS-DGQWVY-----VTTVGTVVTSVSC 98
C6 smart01048
This domain of unknown function is found in a C. elegans protein; It is presumed to be an ...
 166-268 2.30e-12

This domain of unknown function is found in a C. elegans protein; It is presumed to be an extracellular domain. The C6 domain contains six conserved cysteine residues in most copies of the domain. However some copies of the domain are missing cysteine residues 1 and 3 suggesting that these form a disulphide bridge.


Pssm-ID: 214994  Cd Length: 98  Bit Score: 63.29  E-value: 2.30e-12
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193203975   166 CDPALITYGVGDDQTPevaIDVTHSAVTTT------AGVSSMTITCSG-ADDFNVQMDLNGaftPVENNLDPPPQTVTIN 238
Cdd:smart01048   1 CSSCANLLGVGDNATQ---IDGTYGDFLTTptigtaTGCSTVTITCSGtSAGDNAYLLFNG---PAENQLDSGPQTVTIT 74

                           90       100       110
                   ....*....|....*....|....*....|
gi 193203975   239 AQCNtADMIWNYVTmvngqPSTQALDSVTC 268
Cdd:smart01048  75 LTCN-SDGQWVYVT-----TVGTVVTSVSC 98
C6 smart01048
This domain of unknown function is found in a C. elegans protein; It is presumed to be an ...
 286-388 2.30e-12

This domain of unknown function is found in a C. elegans protein; It is presumed to be an extracellular domain. The C6 domain contains six conserved cysteine residues in most copies of the domain. However some copies of the domain are missing cysteine residues 1 and 3 suggesting that these form a disulphide bridge.


Pssm-ID: 214994  Cd Length: 98  Bit Score: 63.29  E-value: 2.30e-12
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193203975   286 CDPALITYGVGDDQTPevaIDVTHSAVTTT------AGVSSMTITCSG-ADDFNVQMDLNGaftPVENNLDPPPQTVTIN 358
Cdd:smart01048   1 CSSCANLLGVGDNATQ---IDGTYGDFLTTptigtaTGCSTVTITCSGtSAGDNAYLLFNG---PAENQLDSGPQTVTIT 74

                           90       100       110
                   ....*....|....*....|....*....|
gi 193203975   359 AQCNtADMIWNYVTmvngqPSTQALDSVTC 388
Cdd:smart01048  75 LTCN-SDGQWVYVT-----TVGTVVTSVSC 98
C6 smart01048
This domain of unknown function is found in a C. elegans protein; It is presumed to be an ...
 46-148 2.39e-12

This domain of unknown function is found in a C. elegans protein; It is presumed to be an extracellular domain. The C6 domain contains six conserved cysteine residues in most copies of the domain. However some copies of the domain are missing cysteine residues 1 and 3 suggesting that these form a disulphide bridge.


Pssm-ID: 214994  Cd Length: 98  Bit Score: 63.29  E-value: 2.39e-12
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193203975    46 CSPDTLVLGQGDNQNPevaIDVTHSAVTTT------AGTSSMTITCSG-ATDFNVQMELNGaftPAENDQDPLPQTVTIN 118
Cdd:smart01048   1 CSSCANLLGVGDNATQ---IDGTYGDFLTTptigtaTGCSTVTITCSGtSAGDNAYLLFNG---PAENQLDSGPQTVTIT 74

                           90       100       110
                   ....*....|....*....|....*....|
gi 193203975   119 AQCNtADMKWNYVTvingeTFTEPLDSVTC 148
Cdd:smart01048  75 LTCN-SDGQWVYVT-----TVGTVVTSVSC 98
C6 smart01048
This domain of unknown function is found in a C. elegans protein; It is presumed to be an ...
 406-508 3.57e-12

This domain of unknown function is found in a C. elegans protein; It is presumed to be an extracellular domain. The C6 domain contains six conserved cysteine residues in most copies of the domain. However some copies of the domain are missing cysteine residues 1 and 3 suggesting that these form a disulphide bridge.


Pssm-ID: 214994  Cd Length: 98  Bit Score: 62.90  E-value: 3.57e-12
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193203975   406 CDPALITYGVGDDQTPevaIDVTHSAVTTT------AGVSSMTITCSG-ADDFNVQMDLNGaftPVENNLDPPPQTVTIN 478
Cdd:smart01048   1 CSSCANLLGVGDNATQ---IDGTYGDFLTTptigtaTGCSTVTITCSGtSAGDNAYLLFNG---PAENQLDSGPQTVTIT 74

                           90       100       110
                   ....*....|....*....|....*....|
gi 193203975   479 AQCNtADMIWNYVTmvngqPSTQALDTVTC 508
Cdd:smart01048  75 LTCN-SDGQWVYVT-----TVGTVVTSVSC 98
C6 pfam01681
C6 domain; This domain of unknown function is found in the C. elegans protein Swiss:Q19522. It ...
 532-622 4.77e-09

C6 domain; This domain of unknown function is found in the C. elegans protein Swiss:Q19522. It is presumed to be an extracellular domain. The C6 domain contains six conserved cysteine residues in most copies of the domain. However some copies of the domain are missing cysteine residues 1 and 3 suggesting that these form a disulphide bridge.


Pssm-ID: 460292  Cd Length: 90  Bit Score: 53.67  E-value: 4.77e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193203975  532 QTMVDVTYSDFMSTPIAGTADSTSTMKISC----SAIDGYTVLMQLNAqtipleGQFEPQEVTITVTCNSADMtWTYTad 607
Cdd:pfam01681  10 GFEIDVTYTDGMTTLDHGTATGCSTVTITCagttSAENAYILGGPFND------GQPLTGTVTITLTCNSVGQ-WVYT-- 80

                          90
                  ....*....|....*
gi 193203975  608 agtgpVTIDVNSVRC 622
Cdd:pfam01681  81 -----YGRVITSVSC 90
C6 pfam01681
C6 domain; This domain of unknown function is found in the C. elegans protein Swiss:Q19522. It ...
 46-148 1.46e-05

C6 domain; This domain of unknown function is found in the C. elegans protein Swiss:Q19522. It is presumed to be an extracellular domain. The C6 domain contains six conserved cysteine residues in most copies of the domain. However some copies of the domain are missing cysteine residues 1 and 3 suggesting that these form a disulphide bridge.


Pssm-ID: 460292  Cd Length: 90  Bit Score: 43.66  E-value: 1.46e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193203975   46 CSPDTLVLGQGDNQNPEVAIDVTHSAVTTTaGTSSMTITCSGATDFNVQMELNGAFtpaeNDQDPLPQTVTINAQCNTAD 125
Cdd:pfam01681   1 CSPLLITLGGFEIDVTYTDGMTTLDHGTAT-GCSTVTITCAGTTSAENAYILGGPF----NDGQPLTGTVTITLTCNSVG 75

                          90       100
                  ....*....|....*....|...
gi 193203975  126 MkWNYvtvingeTFTEPLDSVTC 148
Cdd:pfam01681  76 Q-WVY-------TYGRVITSVSC 90
C6 pfam01681
C6 domain; This domain of unknown function is found in the C. elegans protein Swiss:Q19522. It ...
 166-268 4.58e-05

C6 domain; This domain of unknown function is found in the C. elegans protein Swiss:Q19522. It is presumed to be an extracellular domain. The C6 domain contains six conserved cysteine residues in most copies of the domain. However some copies of the domain are missing cysteine residues 1 and 3 suggesting that these form a disulphide bridge.


Pssm-ID: 460292  Cd Length: 90  Bit Score: 42.50  E-value: 4.58e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193203975  166 CDPALITYGVGDDQTPEVAIDVTHSAVTTTaGVSSMTITCSGADDFNVQMDLNGAFtpveNNLDPPPQTVTINAQCNTAD 245
Cdd:pfam01681   1 CSPLLITLGGFEIDVTYTDGMTTLDHGTAT-GCSTVTITCAGTTSAENAYILGGPF----NDGQPLTGTVTITLTCNSVG 75

                          90       100
                  ....*....|....*....|...
gi 193203975  246 MiWNYvtmvngqPSTQALDSVTC 268
Cdd:pfam01681  76 Q-WVY-------TYGRVITSVSC 90
C6 pfam01681
C6 domain; This domain of unknown function is found in the C. elegans protein Swiss:Q19522. It ...
 286-388 4.58e-05

C6 domain; This domain of unknown function is found in the C. elegans protein Swiss:Q19522. It is presumed to be an extracellular domain. The C6 domain contains six conserved cysteine residues in most copies of the domain. However some copies of the domain are missing cysteine residues 1 and 3 suggesting that these form a disulphide bridge.


Pssm-ID: 460292  Cd Length: 90  Bit Score: 42.50  E-value: 4.58e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193203975  286 CDPALITYGVGDDQTPEVAIDVTHSAVTTTaGVSSMTITCSGADDFNVQMDLNGAFtpveNNLDPPPQTVTINAQCNTAD 365
Cdd:pfam01681   1 CSPLLITLGGFEIDVTYTDGMTTLDHGTAT-GCSTVTITCAGTTSAENAYILGGPF----NDGQPLTGTVTITLTCNSVG 75

                          90       100
                  ....*....|....*....|...
gi 193203975  366 MiWNYvtmvngqPSTQALDSVTC 388
Cdd:pfam01681  76 Q-WVY-------TYGRVITSVSC 90
C6 pfam01681
C6 domain; This domain of unknown function is found in the C. elegans protein Swiss:Q19522. It ...
 406-508 6.96e-05

C6 domain; This domain of unknown function is found in the C. elegans protein Swiss:Q19522. It is presumed to be an extracellular domain. The C6 domain contains six conserved cysteine residues in most copies of the domain. However some copies of the domain are missing cysteine residues 1 and 3 suggesting that these form a disulphide bridge.


Pssm-ID: 460292  Cd Length: 90  Bit Score: 41.73  E-value: 6.96e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193203975  406 CDPALITYGVGDDQTPEVAIDVTHSAVTTTaGVSSMTITCSGADDFNVQMDLNGAFtpveNNLDPPPQTVTINAQCNTAD 485
Cdd:pfam01681   1 CSPLLITLGGFEIDVTYTDGMTTLDHGTAT-GCSTVTITCAGTTSAENAYILGGPF----NDGQPLTGTVTITLTCNSVG 75

                          90       100
                  ....*....|....*....|...
gi 193203975  486 MiWNYvtmvngqPSTQALDTVTC 508
Cdd:pfam01681  76 Q-WVY-------TYGRVITSVSC 90
 
Name Accession Description Interval E-value
C6 smart01048
This domain of unknown function is found in a C. elegans protein; It is presumed to be an ...
 516-622 6.35e-16

This domain of unknown function is found in a C. elegans protein; It is presumed to be an extracellular domain. The C6 domain contains six conserved cysteine residues in most copies of the domain. However some copies of the domain are missing cysteine residues 1 and 3 suggesting that these form a disulphide bridge.


Pssm-ID: 214994  Cd Length: 98  Bit Score: 73.69  E-value: 6.35e-16
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193203975   516 CNPEAVMLGVGDAnqpQTMVDVTYSDFMSTPIAGTADSTSTMKISCSAI-DGYTVLMQLNAqtiPLEGQFE--PQEVTIT 592
Cdd:smart01048   1 CSSCANLLGVGDN---ATQIDGTYGDFLTTPTIGTATGCSTVTITCSGTsAGDNAYLLFNG---PAENQLDsgPQTVTIT 74

                           90       100       110
                   ....*....|....*....|....*....|
gi 193203975   593 VTCNSaDMTWTYtadagTGPVTIDVNSVRC 622
Cdd:smart01048  75 LTCNS-DGQWVY-----VTTVGTVVTSVSC 98
C6 smart01048
This domain of unknown function is found in a C. elegans protein; It is presumed to be an ...
 166-268 2.30e-12

This domain of unknown function is found in a C. elegans protein; It is presumed to be an extracellular domain. The C6 domain contains six conserved cysteine residues in most copies of the domain. However some copies of the domain are missing cysteine residues 1 and 3 suggesting that these form a disulphide bridge.


Pssm-ID: 214994  Cd Length: 98  Bit Score: 63.29  E-value: 2.30e-12
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193203975   166 CDPALITYGVGDDQTPevaIDVTHSAVTTT------AGVSSMTITCSG-ADDFNVQMDLNGaftPVENNLDPPPQTVTIN 238
Cdd:smart01048   1 CSSCANLLGVGDNATQ---IDGTYGDFLTTptigtaTGCSTVTITCSGtSAGDNAYLLFNG---PAENQLDSGPQTVTIT 74

                           90       100       110
                   ....*....|....*....|....*....|
gi 193203975   239 AQCNtADMIWNYVTmvngqPSTQALDSVTC 268
Cdd:smart01048  75 LTCN-SDGQWVYVT-----TVGTVVTSVSC 98
C6 smart01048
This domain of unknown function is found in a C. elegans protein; It is presumed to be an ...
 286-388 2.30e-12

This domain of unknown function is found in a C. elegans protein; It is presumed to be an extracellular domain. The C6 domain contains six conserved cysteine residues in most copies of the domain. However some copies of the domain are missing cysteine residues 1 and 3 suggesting that these form a disulphide bridge.


Pssm-ID: 214994  Cd Length: 98  Bit Score: 63.29  E-value: 2.30e-12
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193203975   286 CDPALITYGVGDDQTPevaIDVTHSAVTTT------AGVSSMTITCSG-ADDFNVQMDLNGaftPVENNLDPPPQTVTIN 358
Cdd:smart01048   1 CSSCANLLGVGDNATQ---IDGTYGDFLTTptigtaTGCSTVTITCSGtSAGDNAYLLFNG---PAENQLDSGPQTVTIT 74

                           90       100       110
                   ....*....|....*....|....*....|
gi 193203975   359 AQCNtADMIWNYVTmvngqPSTQALDSVTC 388
Cdd:smart01048  75 LTCN-SDGQWVYVT-----TVGTVVTSVSC 98
C6 smart01048
This domain of unknown function is found in a C. elegans protein; It is presumed to be an ...
 46-148 2.39e-12

This domain of unknown function is found in a C. elegans protein; It is presumed to be an extracellular domain. The C6 domain contains six conserved cysteine residues in most copies of the domain. However some copies of the domain are missing cysteine residues 1 and 3 suggesting that these form a disulphide bridge.


Pssm-ID: 214994  Cd Length: 98  Bit Score: 63.29  E-value: 2.39e-12
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193203975    46 CSPDTLVLGQGDNQNPevaIDVTHSAVTTT------AGTSSMTITCSG-ATDFNVQMELNGaftPAENDQDPLPQTVTIN 118
Cdd:smart01048   1 CSSCANLLGVGDNATQ---IDGTYGDFLTTptigtaTGCSTVTITCSGtSAGDNAYLLFNG---PAENQLDSGPQTVTIT 74

                           90       100       110
                   ....*....|....*....|....*....|
gi 193203975   119 AQCNtADMKWNYVTvingeTFTEPLDSVTC 148
Cdd:smart01048  75 LTCN-SDGQWVYVT-----TVGTVVTSVSC 98
C6 smart01048
This domain of unknown function is found in a C. elegans protein; It is presumed to be an ...
 406-508 3.57e-12

This domain of unknown function is found in a C. elegans protein; It is presumed to be an extracellular domain. The C6 domain contains six conserved cysteine residues in most copies of the domain. However some copies of the domain are missing cysteine residues 1 and 3 suggesting that these form a disulphide bridge.


Pssm-ID: 214994  Cd Length: 98  Bit Score: 62.90  E-value: 3.57e-12
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193203975   406 CDPALITYGVGDDQTPevaIDVTHSAVTTT------AGVSSMTITCSG-ADDFNVQMDLNGaftPVENNLDPPPQTVTIN 478
Cdd:smart01048   1 CSSCANLLGVGDNATQ---IDGTYGDFLTTptigtaTGCSTVTITCSGtSAGDNAYLLFNG---PAENQLDSGPQTVTIT 74

                           90       100       110
                   ....*....|....*....|....*....|
gi 193203975   479 AQCNtADMIWNYVTmvngqPSTQALDTVTC 508
Cdd:smart01048  75 LTCN-SDGQWVYVT-----TVGTVVTSVSC 98
C6 pfam01681
C6 domain; This domain of unknown function is found in the C. elegans protein Swiss:Q19522. It ...
 532-622 4.77e-09

C6 domain; This domain of unknown function is found in the C. elegans protein Swiss:Q19522. It is presumed to be an extracellular domain. The C6 domain contains six conserved cysteine residues in most copies of the domain. However some copies of the domain are missing cysteine residues 1 and 3 suggesting that these form a disulphide bridge.


Pssm-ID: 460292  Cd Length: 90  Bit Score: 53.67  E-value: 4.77e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193203975  532 QTMVDVTYSDFMSTPIAGTADSTSTMKISC----SAIDGYTVLMQLNAqtipleGQFEPQEVTITVTCNSADMtWTYTad 607
Cdd:pfam01681  10 GFEIDVTYTDGMTTLDHGTATGCSTVTITCagttSAENAYILGGPFND------GQPLTGTVTITLTCNSVGQ-WVYT-- 80

                          90
                  ....*....|....*
gi 193203975  608 agtgpVTIDVNSVRC 622
Cdd:pfam01681  81 -----YGRVITSVSC 90
C6 pfam01681
C6 domain; This domain of unknown function is found in the C. elegans protein Swiss:Q19522. It ...
 46-148 1.46e-05

C6 domain; This domain of unknown function is found in the C. elegans protein Swiss:Q19522. It is presumed to be an extracellular domain. The C6 domain contains six conserved cysteine residues in most copies of the domain. However some copies of the domain are missing cysteine residues 1 and 3 suggesting that these form a disulphide bridge.


Pssm-ID: 460292  Cd Length: 90  Bit Score: 43.66  E-value: 1.46e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193203975   46 CSPDTLVLGQGDNQNPEVAIDVTHSAVTTTaGTSSMTITCSGATDFNVQMELNGAFtpaeNDQDPLPQTVTINAQCNTAD 125
Cdd:pfam01681   1 CSPLLITLGGFEIDVTYTDGMTTLDHGTAT-GCSTVTITCAGTTSAENAYILGGPF----NDGQPLTGTVTITLTCNSVG 75

                          90       100
                  ....*....|....*....|...
gi 193203975  126 MkWNYvtvingeTFTEPLDSVTC 148
Cdd:pfam01681  76 Q-WVY-------TYGRVITSVSC 90
C6 pfam01681
C6 domain; This domain of unknown function is found in the C. elegans protein Swiss:Q19522. It ...
 166-268 4.58e-05

C6 domain; This domain of unknown function is found in the C. elegans protein Swiss:Q19522. It is presumed to be an extracellular domain. The C6 domain contains six conserved cysteine residues in most copies of the domain. However some copies of the domain are missing cysteine residues 1 and 3 suggesting that these form a disulphide bridge.


Pssm-ID: 460292  Cd Length: 90  Bit Score: 42.50  E-value: 4.58e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193203975  166 CDPALITYGVGDDQTPEVAIDVTHSAVTTTaGVSSMTITCSGADDFNVQMDLNGAFtpveNNLDPPPQTVTINAQCNTAD 245
Cdd:pfam01681   1 CSPLLITLGGFEIDVTYTDGMTTLDHGTAT-GCSTVTITCAGTTSAENAYILGGPF----NDGQPLTGTVTITLTCNSVG 75

                          90       100
                  ....*....|....*....|...
gi 193203975  246 MiWNYvtmvngqPSTQALDSVTC 268
Cdd:pfam01681  76 Q-WVY-------TYGRVITSVSC 90
C6 pfam01681
C6 domain; This domain of unknown function is found in the C. elegans protein Swiss:Q19522. It ...
 286-388 4.58e-05

C6 domain; This domain of unknown function is found in the C. elegans protein Swiss:Q19522. It is presumed to be an extracellular domain. The C6 domain contains six conserved cysteine residues in most copies of the domain. However some copies of the domain are missing cysteine residues 1 and 3 suggesting that these form a disulphide bridge.


Pssm-ID: 460292  Cd Length: 90  Bit Score: 42.50  E-value: 4.58e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193203975  286 CDPALITYGVGDDQTPEVAIDVTHSAVTTTaGVSSMTITCSGADDFNVQMDLNGAFtpveNNLDPPPQTVTINAQCNTAD 365
Cdd:pfam01681   1 CSPLLITLGGFEIDVTYTDGMTTLDHGTAT-GCSTVTITCAGTTSAENAYILGGPF----NDGQPLTGTVTITLTCNSVG 75

                          90       100
                  ....*....|....*....|...
gi 193203975  366 MiWNYvtmvngqPSTQALDSVTC 388
Cdd:pfam01681  76 Q-WVY-------TYGRVITSVSC 90
C6 pfam01681
C6 domain; This domain of unknown function is found in the C. elegans protein Swiss:Q19522. It ...
 406-508 6.96e-05

C6 domain; This domain of unknown function is found in the C. elegans protein Swiss:Q19522. It is presumed to be an extracellular domain. The C6 domain contains six conserved cysteine residues in most copies of the domain. However some copies of the domain are missing cysteine residues 1 and 3 suggesting that these form a disulphide bridge.


Pssm-ID: 460292  Cd Length: 90  Bit Score: 41.73  E-value: 6.96e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193203975  406 CDPALITYGVGDDQTPEVAIDVTHSAVTTTaGVSSMTITCSGADDFNVQMDLNGAFtpveNNLDPPPQTVTINAQCNTAD 485
Cdd:pfam01681   1 CSPLLITLGGFEIDVTYTDGMTTLDHGTAT-GCSTVTITCAGTTSAENAYILGGPF----NDGQPLTGTVTITLTCNSVG 75

                          90       100
                  ....*....|....*....|...
gi 193203975  486 MiWNYvtmvngqPSTQALDTVTC 508
Cdd:pfam01681  76 Q-WVY-------TYGRVITSVSC 90
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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