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Conserved domains on  [gi|17537707|ref|NP_494387|]
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CC domain-containing protein [Caenorhabditis elegans]

Protein Classification

CC domain-containing protein( domain architecture ID 10522910)

CC domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
CC pfam04942
CC domain; This short domain contains four conserved cysteines that probably for two ...
 27-60 2.50e-07

CC domain; This short domain contains four conserved cysteines that probably for two disulphide bonds. The domain is named after the characteriztic CC motif.


:

Pssm-ID: 428212  Cd Length: 34  Bit Score: 43.37  E-value: 2.50e-07
                          10        20        30
                  ....*....|....*....|....*....|....
gi 17537707    27 IEAYLDCKGPMSPAIFRACPVGEVLVLEDNCCDS 60
Cdd:pfam04942   1 DASTLTCKSPTGPAINGACPSGYVVVSGGRCCPK 34
CC pfam04942
CC domain; This short domain contains four conserved cysteines that probably for two ...
 65-104 2.96e-07

CC domain; This short domain contains four conserved cysteines that probably for two disulphide bonds. The domain is named after the characteriztic CC motif.


:

Pssm-ID: 428212  Cd Length: 34  Bit Score: 43.37  E-value: 2.96e-07
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|
gi 17537707    65 DTLTATClkgyghKGAWAPAINNMCPTGSRVTKGYWCCYT 104
Cdd:pfam04942   1 DASTLTC------KSPTGPAINGACPSGYVVVSGGRCCPK 34
 
Name Accession Description Interval E-value
CC pfam04942
CC domain; This short domain contains four conserved cysteines that probably for two ...
 27-60 2.50e-07

CC domain; This short domain contains four conserved cysteines that probably for two disulphide bonds. The domain is named after the characteriztic CC motif.


Pssm-ID: 428212  Cd Length: 34  Bit Score: 43.37  E-value: 2.50e-07
                          10        20        30
                  ....*....|....*....|....*....|....
gi 17537707    27 IEAYLDCKGPMSPAIFRACPVGEVLVLEDNCCDS 60
Cdd:pfam04942   1 DASTLTCKSPTGPAINGACPSGYVVVSGGRCCPK 34
CC pfam04942
CC domain; This short domain contains four conserved cysteines that probably for two ...
 65-104 2.96e-07

CC domain; This short domain contains four conserved cysteines that probably for two disulphide bonds. The domain is named after the characteriztic CC motif.


Pssm-ID: 428212  Cd Length: 34  Bit Score: 43.37  E-value: 2.96e-07
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|
gi 17537707    65 DTLTATClkgyghKGAWAPAINNMCPTGSRVTKGYWCCYT 104
Cdd:pfam04942   1 DASTLTC------KSPTGPAINGACPSGYVVVSGGRCCPK 34
 
Name Accession Description Interval E-value
CC pfam04942
CC domain; This short domain contains four conserved cysteines that probably for two ...
 27-60 2.50e-07

CC domain; This short domain contains four conserved cysteines that probably for two disulphide bonds. The domain is named after the characteriztic CC motif.


Pssm-ID: 428212  Cd Length: 34  Bit Score: 43.37  E-value: 2.50e-07
                          10        20        30
                  ....*....|....*....|....*....|....
gi 17537707    27 IEAYLDCKGPMSPAIFRACPVGEVLVLEDNCCDS 60
Cdd:pfam04942   1 DASTLTCKSPTGPAINGACPSGYVVVSGGRCCPK 34
CC pfam04942
CC domain; This short domain contains four conserved cysteines that probably for two ...
 65-104 2.96e-07

CC domain; This short domain contains four conserved cysteines that probably for two disulphide bonds. The domain is named after the characteriztic CC motif.


Pssm-ID: 428212  Cd Length: 34  Bit Score: 43.37  E-value: 2.96e-07
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|
gi 17537707    65 DTLTATClkgyghKGAWAPAINNMCPTGSRVTKGYWCCYT 104
Cdd:pfam04942   1 DASTLTC------KSPTGPAINGACPSGYVVVSGGRCCPK 34
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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