NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|17535957|ref|NP_493795|]
View 

Cytochrome b-c1 complex subunit 7 [Caenorhabditis elegans]

Protein Classification

cytochrome b-c1 complex subunit 7( domain architecture ID 10491599)

cytochrome b-c1 complex subunit 7 is the 14kD subunit of the ubiquinol-cytochrome c oxidoreductase (b-c1 complex) which is part of the respiratory electron transport chain; similar to Saccharomyces cerevisiae Qcr7p

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
UCR_14kD pfam02271
Ubiquinol-cytochrome C reductase complex 14kD subunit; The ubiquinol-cytochrome C reductase ...
 16-116 2.62e-32

Ubiquinol-cytochrome C reductase complex 14kD subunit; The ubiquinol-cytochrome C reductase complex (cytochrome bc1 complex) is a respiratory multienzyme complex. This Pfam family represents the 14kD (or VI) subunit of the complex which is not directly involved in electron transfer, but has a role in assembly of the complex.


:

Pssm-ID: 460519  Cd Length: 100  Bit Score: 109.53  E-value: 2.62e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17535957    16 GTIASTLRKFA--WSNLWGGREYGLQFHDTYFEPAPEVTEALRRLnlqEPHVFDQRKIRLSRAHTLALHGEKLPKAEWTQ 93
Cdd:pfam02271   1 PWLSKLLKPIAkwYANAAGYRKLGLRYDDLLIEENPDVQEALRRL---PPKESYDRVFRIRRALQLSLKHKLLPKEQWTK 77

                          90       100
                  ....*....|....*....|...
gi 17535957    94 WDQESWYLKPYLDEIEAEKKARA 116
Cdd:pfam02271  78 PEEDVPYLTPYIDEVEKEAKERE 100
 
Name Accession Description Interval E-value
UCR_14kD pfam02271
Ubiquinol-cytochrome C reductase complex 14kD subunit; The ubiquinol-cytochrome C reductase ...
 16-116 2.62e-32

Ubiquinol-cytochrome C reductase complex 14kD subunit; The ubiquinol-cytochrome C reductase complex (cytochrome bc1 complex) is a respiratory multienzyme complex. This Pfam family represents the 14kD (or VI) subunit of the complex which is not directly involved in electron transfer, but has a role in assembly of the complex.


Pssm-ID: 460519  Cd Length: 100  Bit Score: 109.53  E-value: 2.62e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17535957    16 GTIASTLRKFA--WSNLWGGREYGLQFHDTYFEPAPEVTEALRRLnlqEPHVFDQRKIRLSRAHTLALHGEKLPKAEWTQ 93
Cdd:pfam02271   1 PWLSKLLKPIAkwYANAAGYRKLGLRYDDLLIEENPDVQEALRRL---PPKESYDRVFRIRRALQLSLKHKLLPKEQWTK 77

                          90       100
                  ....*....|....*....|...
gi 17535957    94 WDQESWYLKPYLDEIEAEKKARA 116
Cdd:pfam02271  78 PEEDVPYLTPYIDEVEKEAKERE 100
 
Name Accession Description Interval E-value
UCR_14kD pfam02271
Ubiquinol-cytochrome C reductase complex 14kD subunit; The ubiquinol-cytochrome C reductase ...
 16-116 2.62e-32

Ubiquinol-cytochrome C reductase complex 14kD subunit; The ubiquinol-cytochrome C reductase complex (cytochrome bc1 complex) is a respiratory multienzyme complex. This Pfam family represents the 14kD (or VI) subunit of the complex which is not directly involved in electron transfer, but has a role in assembly of the complex.


Pssm-ID: 460519  Cd Length: 100  Bit Score: 109.53  E-value: 2.62e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17535957    16 GTIASTLRKFA--WSNLWGGREYGLQFHDTYFEPAPEVTEALRRLnlqEPHVFDQRKIRLSRAHTLALHGEKLPKAEWTQ 93
Cdd:pfam02271   1 PWLSKLLKPIAkwYANAAGYRKLGLRYDDLLIEENPDVQEALRRL---PPKESYDRVFRIRRALQLSLKHKLLPKEQWTK 77

                          90       100
                  ....*....|....*....|...
gi 17535957    94 WDQESWYLKPYLDEIEAEKKARA 116
Cdd:pfam02271  78 PEEDVPYLTPYIDEVEKEAKERE 100
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH