LOW QUALITY PROTEIN: Glycoside hydrolase family 25 protein [Caenorhabditis elegans]
Protein Classification
glycoside hydrolase family 25 domain-containing protein( domain architecture ID 2550)
glycoside hydrolase family 25 domain-containing protein is a peptidoglycan hydrolase (also called lysozyme) that degrades bacterial cell walls by catalyzing the hydrolysis of 1,4-beta-linkages between N-acetylmuramic acid and N-acetyl-D-glucosamine residues
List of domain hits
| Name | Accession | Description | Interval | E-value | ||||
| GH25_muramidase super family | cl10448 | Endo-N-acetylmuramidases (muramidases) are lysozymes (also referred to as peptidoglycan ... |
21-221 | 7.78e-30 | ||||
Endo-N-acetylmuramidases (muramidases) are lysozymes (also referred to as peptidoglycan hydrolases) that degrade bacterial cell walls by catalyzing the hydrolysis of 1,4-beta-linkages between N-acetylmuramic acid and N-acetyl-D-glucosamine residues. This family of muramidases contains a glycosyl hydrolase family 25 (GH25) catalytic domain and is found in bacteria, fungi, slime molds, round worms, protozoans and bacteriophages. The bacteriophage members are referred to as endolysins which are involved in lysing the host cell at the end of the replication cycle to allow release of mature phage particles. Endolysins are typically modular enzymes consisting of a catalytically active domain that hydrolyzes the peptidoglycan cell wall and a cell wall-binding domain that anchors the protein to the cell wall. Endolysins generally have narrow substrate specificities with either intra-species or intra-genus bacteriolytic activity. The actual alignment was detected with superfamily member cd06416: Pssm-ID: 447900 Cd Length: 196 Bit Score: 109.72 E-value: 7.78e-30
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| Name | Accession | Description | Interval | E-value | ||||
| GH25_Lys1-like | cd06416 | Lys-1 is a lysozyme encoded by the Caenorhabditis elegans lys-1 gene. This gene is one of a ... |
21-221 | 7.78e-30 | ||||
Lys-1 is a lysozyme encoded by the Caenorhabditis elegans lys-1 gene. This gene is one of a several lysozyme genes upregulated upon infection by the Gram-negative bacterial pathogen Serratia marcescens. Lys-1 contains a glycosyl hydrolase family 25 (GH25) catalytic domain. This family also includes Lys-5 from Caenorhabditis elegans. Pssm-ID: 119378 Cd Length: 196 Bit Score: 109.72 E-value: 7.78e-30
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| Name | Accession | Description | Interval | E-value | ||||
| GH25_Lys1-like | cd06416 | Lys-1 is a lysozyme encoded by the Caenorhabditis elegans lys-1 gene. This gene is one of a ... |
21-221 | 7.78e-30 | ||||
Lys-1 is a lysozyme encoded by the Caenorhabditis elegans lys-1 gene. This gene is one of a several lysozyme genes upregulated upon infection by the Gram-negative bacterial pathogen Serratia marcescens. Lys-1 contains a glycosyl hydrolase family 25 (GH25) catalytic domain. This family also includes Lys-5 from Caenorhabditis elegans. Pssm-ID: 119378 Cd Length: 196 Bit Score: 109.72 E-value: 7.78e-30
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