|
Name |
Accession |
Description |
Interval |
E-value |
| PTZ00139 |
PTZ00139 |
Succinate dehydrogenase [ubiquinone] flavoprotein subunit; Provisional |
5-640 |
0e+00 |
|
Succinate dehydrogenase [ubiquinone] flavoprotein subunit; Provisional
Pssm-ID: 240286 [Multi-domain] Cd Length: 617 Bit Score: 1078.61 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 5 VKSINRAKTPVRTYMKKQVSAttNFDVVDHTFDAVVVGAGGAGLRAAMGLSEGGMKTAVITKLFPTRSHTVAAQGGVNAA 84
Cdd:PTZ00139 1 RFAVPAFNRLTRTFFSGHLSS--AYPVIDHTYDAVVVGAGGAGLRAALGLVELGYKTACISKLFPTRSHTVAAQGGINAA 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 85 LGNMNPDNWRWHFYDTVKGSDWLGDQDAIHYMTREAERAIIELENYGMPFSRTTDGKIYQRAFGGQSNDFGRGGQAHRTC 164
Cdd:PTZ00139 79 LGNMTEDDWRWHAYDTVKGSDWLGDQDAIQYMCREAPQAVLELESYGLPFSRTKDGKIYQRAFGGQSLKFGKGGQAYRCA 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 165 CVADRTGHSLLHTLYGASLQYDCNYFVEYFALDLIMDK-GKCIGVVALDIETGQIHRFRAKNTVLATGGYGRAYFSCTSA 243
Cdd:PTZ00139 159 AAADRTGHAMLHTLYGQSLKYDCNFFIEYFALDLIMDEdGECRGVIAMSMEDGSIHRFRAHYTVIATGGYGRAYFSCTSA 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 244 HTCTGDGTALTARAGIRNSDMEFVQFHPTGIYGVGCLITEGSRGEGGYLVNSQGERFMERYAPNAKDLASRDVVSRAMTM 323
Cdd:PTZ00139 239 HTCTGDGGAMVSRAGLPLQDLEFVQFHPTGIYGAGCLITEGCRGEGGILRNSEGERFMERYAPTAKDLASRDVVSRAMTI 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 324 EINEGRGVGPNKDHIYLQLHHLPAEQLQQRLPGISETAQIFAGVDVTKEPIPVIPTVHYNMGGVPTNYKGQVLDFTPEGG 403
Cdd:PTZ00139 319 EILEGRGCGPNKDHIYLDLTHLPPETLHERLPGISETAKIFAGVDVTKEPIPVLPTVHYNMGGIPTNWKTQVLTQRNGDD 398
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 404 DKVIPGLYAAGECAAHSVHGANRLGANSLLDLVIFGRSCALTILNENKPGDSIPELPVNCEEKSCDNLNGLLHSKGDISS 483
Cdd:PTZ00139 399 DKIVPGLLAAGEAACASVHGANRLGANSLLDIVVFGRAAANTVMEILKPGRPQPDLPKDAGEASIARLDKIRHNKGDIST 478
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 484 IELRQKMQMTMQKHAAVFRRGDLLKEGVDKMSSIYKEQQNLKAcADSGKVWNSELVETLELQNLLINANQTIVAAENRTE 563
Cdd:PTZ00139 479 AQIRKRMQRTMQKHAAVFRIGESLQEGVEKIKEIYSDFKDVKI-KDKSLVWNTDLIETLELENLLTQAKQTILSAEARKE 557
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 17505833 564 SRGAHARDDFQERiDeydysnplegqqkkpfDQHWRKHSIIGI-DTKTGAVDLTYRPVIDKTLDkSETDWVPPKVRSY 640
Cdd:PTZ00139 558 SRGAHARDDFPER-D----------------DKNWMKHTLSYIrDVKKGKVRLTYRPVITTPLD-NEMETVPPAKRVY 617
|
|
| PLN00128 |
PLN00128 |
Succinate dehydrogenase [ubiquinone] flavoprotein subunit |
9-640 |
0e+00 |
|
Succinate dehydrogenase [ubiquinone] flavoprotein subunit
Pssm-ID: 177739 [Multi-domain] Cd Length: 635 Bit Score: 943.90 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 9 NRAKTPVRTYMKKQVSATTNFDVVDHTFDAVVVGAGGAGLRAAMGLSEGGMKTAVITKLFPTRSHTVAAQGGVNAALGNM 88
Cdd:PLN00128 24 SASLRTALSRFFSTGGGRSSYTIVDHTYDAVVVGAGGAGLRAAIGLSEHGFNTACITKLFPTRSHTVAAQGGINAALGNM 103
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 89 NPDNWRWHFYDTVKGSDWLGDQDAIHYMTREAERAIIELENYGMPFSRTTDGKIYQRAFGGQSNDFGRGGQAHRTCCVAD 168
Cdd:PLN00128 104 TEDDWRWHMYDTVKGSDWLGDQDAIQYMCREAPKAVIELENYGLPFSRTEDGKIYQRAFGGQSLDFGKGGQAYRCACAAD 183
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 169 RTGHSLLHTLYGASLQYDCNYFVEYFALDLIMD-KGKCIGVVALDIETGQIHRFRAKNTVLATGGYGRAYFSCTSAHTCT 247
Cdd:PLN00128 184 RTGHAMLHTLYGQAMKHNTQFFVEYFALDLIMDsDGACQGVIALNMEDGTLHRFRAHSTILATGGYGRAYFSATSAHTCT 263
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 248 GDGTALTARAGIRNSDMEFVQFHPTGIYGVGCLITEGSRGEGGYLVNSQGERFMERYAPNAKDLASRDVVSRAMTMEINE 327
Cdd:PLN00128 264 GDGNAMVARAGLPLQDLEFVQFHPTGIYGAGCLITEGSRGEGGILRNSEGERFMERYAPTAKDLASRDVVSRSMTMEIRE 343
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 328 GRGVGPNKDHIYLQLHHLPAEQLQQRLPGISETAQIFAGVDVTKEPIPVIPTVHYNMGGVPTNYKGQVLDFTPEGGDKVI 407
Cdd:PLN00128 344 GRGVGPEKDHIYLHLNHLPPEVLKERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNYHGEVVTIKGDDPDAVV 423
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 408 PGLYAAGECAAHSVHGANRLGANSLLDLVIFGRSCALTILNENKPGDSIPELPVNCEEKSCDNLNGLLHSKGDISSIELR 487
Cdd:PLN00128 424 PGLMAAGEAACASVHGANRLGANSLLDIVVFGRACANRVAEIAKPGEKQKPLPKDAGEKTIAWLDKLRNANGSLPTSKIR 503
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 488 QKMQMTMQKHAAVFRRGDLLKEGVDKMSSIYKEQQNLKAcADSGKVWNSELVETLELQNLLINANQTIVAAENRTESRGA 567
Cdd:PLN00128 504 LNMQRVMQNNAAVFRTQETLEEGCKLIDEAWDSFHDVKV-TDRSLIWNSDLIETLELENLLINACITMHSAEARKESRGA 582
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 17505833 568 HARDDFQERIDEydysnplegqqkkpfdqHWRKHSIIGIDtkTGAVDLTYRPVIDKTLDKsETDWVPPKVRSY 640
Cdd:PLN00128 583 HAREDFTKRDDE-----------------NWMKHTLGYWE--EGKVRLDYRPVHMNTLDD-EVETFPPKARVY 635
|
|
| sdhA_forward |
TIGR01816 |
succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup; Succinate ... |
54-640 |
0e+00 |
|
succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup; Succinate dehydrogenase and fumarate reductase are homologous enzymes reversible in principle but favored under different circumstances. This model represents a narrowly defined clade of the succinate dehydrogenase flavoprotein subunit as found in mitochondria, in Rickettsia, in E. coli and other Proteobacteria, and in a few other lineages. However, this model excludes all known fumarate reductases. It also excludes putative succinate dehydrogenases that appear to diverged before the split between E. coli succinate dehydrogenase and fumarate reductase. [Energy metabolism, TCA cycle]
Pssm-ID: 130875 [Multi-domain] Cd Length: 565 Bit Score: 904.90 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 54 LSEGGMKTAVITKLFPTRSHTVAAQGGVNAALGNMNPDNWRWHFYDTVKGSDWLGDQDAIHYMTREAERAIIELENYGMP 133
Cdd:TIGR01816 1 LAKGGVNTACVTKLFPTRSHTVAAQGGISAALGNMEEDNWRWHMYDTVKGSDWLGDQDAIEYMCKQAPEAVLELEHMGMP 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 134 FSRTTDGKIYQRAFGGQSNDFGRGGQAHRTCCVADRTGHSLLHTLYGASLQYDCNYFVEYFALDLIMDKGKCIGVVALDI 213
Cdd:TIGR01816 81 FSRTEDGKIYQRPFGGHTRDFGKGGAAERACAAADRTGHAILHTLYQQNLKADTSFFNEYFALDLLMEDGECRGVIAYCL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 214 ETGQIHRFRAKNTVLATGGYGRAYFSCTSAHTCTGDGTALTARAGIRNSDMEFVQFHPTGIYGVGCLITEGSRGEGGYLV 293
Cdd:TIGR01816 161 ETGEIHRFRAKAVVLATGGYGRIYFSTTNAHTLTGDGTGMVTRAGLPLQDMEFVQFHPTGIAGAGCLITEGCRGEGGILI 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 294 NSQGERFMERYAPNAKDLASRDVVSRAMTMEINEGRGVGPNKDHIYLQLHHLPAEQLQQRLPGISETAQIFAGVDVTKEP 373
Cdd:TIGR01816 241 NANGERFMERYAPTAKDLASRDVVSRSMTLEIREGRGVGPNKDHVYLDLDHLGPEVLEGRLPGISETARTFAGVDPVKDP 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 374 IPVIPTVHYNMGGVPTNYKGQVLDfTPEGGDKVIPGLYAAGECAAHSVHGANRLGANSLLDLVIFGRSCALTILNENKPG 453
Cdd:TIGR01816 321 IPVLPTVHYNMGGIPTNYHGQVLR-DGNGNDQIVPGLYAAGEAACVSVHGANRLGTNSLLDLVVFGRAAGLSAAEYAKPG 399
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 454 DSIPELPVNCEEKSCDNLNGLLHSKGDISSIELRQKMQMTMQKHAAVFRRGDLLKEGVDKMSSIYKEQQNLKAcADSGKV 533
Cdd:TIGR01816 400 SDVKPMPPNAGEESVMRLDKLRFATGGERVAALRLELQRSMQNHAGVFRTGEVLQKGVEKISALKERYKNVKI-NDKSKV 478
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 534 WNSELVETLELQNLLINANQTIVAAENRTESRGAHARDDFQERIDEydysnplegqqkkpfdqHWRKHSIIGIDTKTGAV 613
Cdd:TIGR01816 479 WNTDLVEALELQNLLECAEATAVSAEARKESRGAHAREDFPERDDE-----------------NWLKHTLSYVDINTGKV 541
|
570 580
....*....|....*....|....*..
gi 17505833 614 DLTYRPVIDKTLDKSETDwvpPKVRSY 640
Cdd:TIGR01816 542 LLSYKPVIFKPLTVADFE---PKKRVY 565
|
|
| sdhA_frdA_Gneg |
TIGR01812 |
succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial ... |
56-640 |
0e+00 |
|
succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup; This model represents the succinate dehydrogenase flavoprotein subunit as found in Gram-negative bacteria, mitochondria, and some Archaea. Mitochondrial forms interact with ubiquinone and are designated EC 1.3.5.1, but can be degraded to 1.3.99.1. Some isozymes in E. coli and other species run primarily in the opposite direction and are designated fumarate reductase. [Energy metabolism, Aerobic, Energy metabolism, Anaerobic, Energy metabolism, TCA cycle]
Pssm-ID: 273815 [Multi-domain] Cd Length: 566 Bit Score: 749.93 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 56 EGGMKTAVITKLFPTRSHTVAAQGGVNAALGNMNP-DNWRWHFYDTVKGSDWLGDQDAIHYMTREAERAIIELENYGMPF 134
Cdd:TIGR01812 20 KAGLNTAVISKVYPTRSHTVAAQGGMAAALGNVDPdDSWEWHAYDTVKGSDYLADQDAVEYMCQEAPKAILELEHWGVPF 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 135 SRTTDGKIYQRAFGGQSNDfgrggqahRTCCVADRTGHSLLHTLYGASLQYDCNYFVEYFALDLIMDKGKCIGVVALDIE 214
Cdd:TIGR01812 100 SRTPDGRIAQRPFGGHSKD--------RTCYAADKTGHALLHTLYEQCLKLGVSFFNEYFALDLIHDDGRVRGVVAYDLK 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 215 TGQIHRFRAKNTVLATGGYGRAYFSCTSAHTCTGDGTALTARAGIRNSDMEFVQFHPTGIYGVGCLITEGSRGEGGYLVN 294
Cdd:TIGR01812 172 TGEIVFFRAKAVVLATGGYGRIYKTTTNAHINTGDGMAMALRAGVPLKDMEFVQFHPTGLYPSGILITEGCRGEGGYLVN 251
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 295 SQGERFMERYAPNAKDLASRDVVSRAMTMEINEGRGVG-PNKDHIYLQLHHLPAEQLQQRLPGISETAQIFAGVDVTKEP 373
Cdd:TIGR01812 252 KNGERFMERYAPEKMELAPRDVVSRAMWTEIREGRGVGsPPGDYVYLDLRHLGEEKIEERLPQIRELAKYFAGVDPVKEP 331
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 374 IPVIPTVHYNMGGVPTNYKGQVLDFTpeggdkVIPGLYAAGECAAHSVHGANRLGANSLLDLVIFGRSCALTILNE-NKP 452
Cdd:TIGR01812 332 IPVRPTAHYSMGGIPTDYTGRVICET------IVKGLFAAGECACVSVHGANRLGGNSLLELVVFGRIAGEAAAEYaAKT 405
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 453 GDSIPELPVNCEEKSCDNLNGLLHSKGDISSIELRQKMQMTMQKHAAVFRRGDLLKEGVDKMSSIYKEQQNLKAcADSGK 532
Cdd:TIGR01812 406 GNPAADIEEEAVKAEEALIDLLVESNGGERVAKIREELGDTMDDNVGIFRTEELLKKAVDEIEELRERYKNVRI-NDKSK 484
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 533 VWNSELVETLELQNLLINANQTIVAAENRTESRGAHARDDFQERIDEydysnplegqqkkpfdqHWRKHSIIGIDtKTGA 612
Cdd:TIGR01812 485 VFNTDLLEALELGNMLDLAEVVAAGALNRKESRGAHAREDYPERDDE-----------------NWLKHTLAYYD-NPGT 546
|
570 580
....*....|....*....|....*...
gi 17505833 613 VDLTYRPVIDKTLdksetdwvPPKVRSY 640
Cdd:TIGR01812 547 PRLEYKPVTITKY--------EPAERKY 566
|
|
| sdhA |
PRK05945 |
succinate dehydrogenase/fumarate reductase flavoprotein subunit; |
59-640 |
0e+00 |
|
succinate dehydrogenase/fumarate reductase flavoprotein subunit;
Pssm-ID: 180319 [Multi-domain] Cd Length: 575 Bit Score: 542.40 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 59 MKTAVITKLFPTRSHTVAAQGGVNAALGNMNP-DNWRWHFYDTVKGSDWLGDQDAIHYMTREAERAIIELENYGMPFSRT 137
Cdd:PRK05945 29 LDVAVVAKTHPIRSHSVAAQGGIAASLKNVDPeDSWEAHAFDTVKGSDYLADQDAVAILTQEAPDVIIDLEHLGVLFSRL 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 138 TDGKIYQRAFGGQSNDfgrggqahRTCCVADRTGHSLLHTLYGASLQYDCNYFVEYFALDLIMDKGKCIGVVALDIETGQ 217
Cdd:PRK05945 109 PDGRIAQRAFGGHSHN--------RTCYAADKTGHAILHELVNNLRRYGVTIYDEWYVMRLILEDNQAKGVVMYHIADGR 180
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 218 IHRFRAKNTVLATGGYGRAYFSCTSAHTCTGDGTALTARAGIRNSDMEFVQFHPTGIYGVGCLITEGSRGEGGYLVNSQG 297
Cdd:PRK05945 181 LEVVRAKAVMFATGGYGRVFNTTSNDYASTGDGLAMTAIAGLPLEDMEFVQFHPTGLYPVGVLISEAVRGEGAYLINSEG 260
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 298 ERFMERYAPNAKDLASRDVVSRAMTMEINEGRGVGPN----KDHIYLQLHHLPAEQLQQRLPGISETAQIFAGVDVTKEP 373
Cdd:PRK05945 261 DRFMADYAPSRMELAPRDITSRAITLEIRAGRGINPDgsagGPFVYLDLRHMGKEKIMSRVPFCWEEAHRLVGVDAVTEP 340
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 374 IPVIPTVHYNMGGVPTNYKGQVLdftpEGGDKVIPGLYAAGECAAHSVHGANRLGANSLLDLVIFGRSCALTILnENKPG 453
Cdd:PRK05945 341 MPVRPTVHYCMGGIPVNTDGRVR----RSADGLVEGFFAAGECACVSVHGANRLGSNSLLECVVYGRRTGAAIA-EYVQG 415
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 454 DSIPEL-PVNCEEKSCDNLNGLLHSKGDISSIELRQKMQMTMQKHAAVFRRGDLLKEGVDKMSSIyKEQQNLKACADSGK 532
Cdd:PRK05945 416 RKLPEVdEQRYLKEAKQRIQALLDQSGTYRINQLRQQFQDCMTDHCGVFRTEEIMQEGLEKIQQL-KQQYEQIYLDDKGK 494
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 533 VWNSELVETLELQNLLINANQTIVAAENRTESRGAHARDDFQERIdeydysnplegqqkkpfDQHWRKHSIIGIDtkTGA 612
Cdd:PRK05945 495 CWNTELIEALELRSLMVVGEIILTSALNRQESRGAHSREDYPQRD-----------------DQNFLKHTLAYYS--PAG 555
|
570 580
....*....|....*....|....*...
gi 17505833 613 VDLTYRPVIdktldkseTDWVPPKVRSY 640
Cdd:PRK05945 556 IDIQYMPVV--------ITMFEPQERKY 575
|
|
| sdhA |
PRK06069 |
succinate dehydrogenase/fumarate reductase flavoprotein subunit; |
55-640 |
0e+00 |
|
succinate dehydrogenase/fumarate reductase flavoprotein subunit;
Pssm-ID: 235689 [Multi-domain] Cd Length: 577 Bit Score: 537.72 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 55 SEGGMKTAVITKLFPTRSHTVAAQGGVNAALGNMNPDNWRWHFYDTVKGSDWLGDQDAIHYMTREAERAIIELENYGMPF 134
Cdd:PRK06069 28 SGGKLSVAVVSKTQPMRSHSVSAEGGTAAVLYPEKGDSFDLHAYDTVKGSDFLADQDAVEVFVREAPEEIRFLDHWGVPW 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 135 SRTTDGKIYQRAFGGQSndfgrggqAHRTCCVADRTGHSLLHTLYGASLQYD-CNYFVEYFALDLIMDKGKCIGVVALDI 213
Cdd:PRK06069 108 SRRPDGRISQRPFGGMS--------FPRTTFAADKTGFYIMHTLYSRALRFDnIHFYDEHFVTSLIVENGVFKGVTAIDL 179
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 214 ETGQIHRFRAKNTVLATGGYGRAYFSCTSAHTCTGDGTALTARAGIRNSDMEFVQFHPTGIYGVGCLITEGSRGEGGYLV 293
Cdd:PRK06069 180 KRGEFKVFQAKAGIIATGGAGRLYGFTTYAHSVTGDGLAIAYRAGIPLKDMEFVQFHPTGLVPSGILITEAARGEGGYLI 259
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 294 NSQGERFMERYAPNAKDLASRDVVSRAMTMEINEGRGVGPNKDHIY--LQLHHLPAEQLQQRLPGISETAQIFAGVDVTK 371
Cdd:PRK06069 260 NKEGERFMKRYAPQKMELAPRDVVSRAIMTEIMEGRGFKHESGLCYvgLDLRHLGEEKINERLPLIREIAKKYAGIDPVT 339
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 372 EPIPVIPTVHYNMGGVPTNYKGQVLdfTPEGgdKVIPGLYAAGECAAHSVHGANRLGANSLLDLVIFGR---SCALTILN 448
Cdd:PRK06069 340 EPIPVRPAAHYTMGGIHTDVYGRVL--TADG--EWVRGLWAAGEAAAVSVHGANRLGSNSTAECLVWGRiagEQAAEYAL 415
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 449 ENKPGDSIPELPVNCEEKSCdnLNGLLHSKGDISSIELRQKMQMTMQKHAAVFRRGDLLKEGVDKMSSIYKEQQNLKAcA 528
Cdd:PRK06069 416 KRPAPSSPVEKLAEKEEKRI--FDKLLKKEGGEPSYEIRRELNDIMDKNFGIFRDESGLAEALKKIKKLRERYKNVRI-E 492
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 529 DSGKVWNSELVETLELQNLLINANQTIVAAENRTESRGAHARDDFQERIDEydysnplegqqkkpfdqHWRKHSIIgidT 608
Cdd:PRK06069 493 DKSRIYNTDLKDALELDGMLDLAEVVAIGALLRTESRGAHYRLDYPKRDDE-----------------NWLKHTLA---Y 552
|
570 580 590
....*....|....*....|....*....|...
gi 17505833 609 KTG-AVDLTYRPVidkTLDKsetdWvPPKVRSY 640
Cdd:PRK06069 553 YTGgGPKVTYTPV---TITK----W-KPEERKY 577
|
|
| PRK09231 |
PRK09231 |
fumarate reductase flavoprotein subunit; Validated |
59-640 |
3.37e-157 |
|
fumarate reductase flavoprotein subunit; Validated
Pssm-ID: 236421 [Multi-domain] Cd Length: 582 Bit Score: 464.49 E-value: 3.37e-157
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 59 MKTAVITKLFPTRSHTVAAQGGVNAALGNmnPDNWRWHFYDTVKGSDWLGDQDAIHYMTREAERAIIELENYGMPFSRTT 138
Cdd:PRK09231 30 LKIALISKVYPMRSHTVAAEGGSAAVAQD--HDSFDYHFHDTVAGGDWLCEQDVVEYFVHHCPTEMTQLEQWGCPWSRKP 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 139 DGKIYQRAFGGQsndfgrggQAHRTCCVADRTGHSLLHTLYGASLQY-DCNYFVEYFALDLIMDKGKCIGVVALDIETGQ 217
Cdd:PRK09231 108 DGSVNVRRFGGM--------KIERTWFAADKTGFHMLHTLFQTSLKYpQIQRFDEHFVLDILVDDGHVRGLVAMNMMEGT 179
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 218 IHRFRAKNTVLATGGYGRAYFSCTSAHTCTGDGTALTARAGIRNSDMEFVQFHPTGIYGVGCLITEGSRGEGGYLVNSQG 297
Cdd:PRK09231 180 LVQIRANAVVMATGGAGRVYRYNTNGGIVTGDGMGMAYRHGVPLRDMEFVQYHPTGLPGSGILMTEGCRGEGGILVNKDG 259
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 298 ERFMERYA---------PNAK--DLASRDVVSRAMTMEINEGRGV-GPNKDHIYLQLHHLPAEQLQQRLPGISETAQIFA 365
Cdd:PRK09231 260 YRYLQDYGlgpetplgePKNKymELGPRDKVSQAFWHEWRKGNTIsTPRGDVVYLDLRHLGEKKLHERLPFICELAKAYV 339
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 366 GVDVTKEPIPVIPTVHYNMGGVPTNYKGQvldfTPeggdkvIPGLYAAGECAAHSVHGANRLGANSLLDLVIFGRSCALT 445
Cdd:PRK09231 340 GVDPVKEPIPVRPTAHYTMGGIETDQNCE----TR------IKGLFAVGECSSVGLHGANRLGSNSLAELVVFGRVAGEQ 409
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 446 ILNENKPGDSIPELPVNCEEKSC-DNLNGLLHSKGDISSIELRQKMQMTMQKHAAVFRRGDLLKEGVDKMSSIYKEQQNL 524
Cdd:PRK09231 410 AAERAATAGPGNEAALDAQAADVeQRLKALVNQEGGENWAKIRDEMGLSMEEGCGIYRTPELMQKTIDKLAELKERFKRV 489
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 525 KAcADSGKVWNSELVETLELQNLLINANQTIVAAENRTESRGAHARDD--FQERIDEydysnplegqqkkpfdqHWRKHS 602
Cdd:PRK09231 490 RI-TDTSSVFNTDLLYTIELGYGLDVAECMAHSALARKESRGAHQRLDegCTERDDV-----------------NFLKHT 551
|
570 580 590
....*....|....*....|....*....|....*...
gi 17505833 603 iIGIDTKTGAVDLTYRPVidkTLDKSetdwvPPKVRSY 640
Cdd:PRK09231 552 -LAFYNADGTPRIEYSDV---KITKS-----PPAKRVY 580
|
|
| NadB |
COG0029 |
Aspartate oxidase [Coenzyme transport and metabolism]; Aspartate oxidase is part of the ... |
60-604 |
2.67e-154 |
|
Aspartate oxidase [Coenzyme transport and metabolism]; Aspartate oxidase is part of the Pathway/BioSystem: NAD biosynthesis
Pssm-ID: 439800 [Multi-domain] Cd Length: 521 Bit Score: 454.95 E-value: 2.67e-154
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 60 KTAVITKLFPTRSHTVAAQGGVNAALGNmnPDNWRWHFYDTVKGSDWLGDQDAIHYMTREAERAIIELENYGMPFSRTTD 139
Cdd:COG0029 28 RVTLLTKGELGESNTRWAQGGIAAVLDP--GDSPELHIADTLAAGAGLCDPEAVRVLVEEGPERIRELIELGVPFDRDED 105
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 140 GKIYQRAFGGQSndfgrggqAHRTCCVADRTGHSLLHTLYGASLQYDcN--YFVEYFALDLIMDK-GKCIGVVALDIETG 216
Cdd:COG0029 106 GELALTREGGHS--------RRRILHAGDATGREIERALLEAVRAHP-NitVLENHFAVDLITDAdGRCVGAYVLDEKTG 176
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 217 QIHRFRAKNTVLATGGYGRAYFSCTSAHTCTGDGTALTARAGIRNSDMEFVQFHPTGIYGVGC---LITEGSRGEGGYLV 293
Cdd:COG0029 177 EVETIRAKAVVLATGGAGQLYAYTTNPDVATGDGIAMAYRAGARLADMEFVQFHPTALYHPGApsfLISEAVRGEGAVLR 256
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 294 NSQGERFMERYAPNAkDLASRDVVSRAMTMEINEGRGvgpnkDHIYLQLHHLPAEQLQQRLPGISETAQIFaGVDVTKEP 373
Cdd:COG0029 257 NADGERFMPDYHPRA-ELAPRDVVARAIDAEMKKTGG-----DCVYLDISHLDAEFIRERFPTIYARCLEL-GIDITKEP 329
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 374 IPVIPTVHYNMGGVPTNYKGQvldfTPeggdkvIPGLYAAGECAAHSVHGANRLGANSLLDLVIFGRSCALTILNENKPG 453
Cdd:COG0029 330 IPVAPAAHYTMGGVATDLDGR----TS------IPGLYAVGEVACTGVHGANRLASNSLLEGLVFGRRAAEDIAARLAES 399
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 454 DSIPELPVNCEEkscdnlngLLHSKGDISSIELRQKMQMTMQKHAAVFRRGDLLKEGVDKMSSIYKEQQNLKACADSgkv 533
Cdd:COG0029 400 PLPPEIPEWDES--------VTDPDEEVLIAHLRDELRRLMWDYVGIVRTAKGLERALRRLELLREEIEEYANFRVS--- 468
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 17505833 534 wnselVETLELQNLLINANQTIVAAENRTESRGAHARDDFQERIDEydysnplegqqkkpfdqhWRKHSII 604
Cdd:COG0029 469 -----RDLLELRNLLLVAELIVRAALARKESRGAHYRSDYPETDPA------------------WRRHTVL 516
|
|
| sdhA |
PRK06452 |
succinate dehydrogenase flavoprotein subunit; Reviewed |
54-640 |
7.46e-146 |
|
succinate dehydrogenase flavoprotein subunit; Reviewed
Pssm-ID: 180567 [Multi-domain] Cd Length: 566 Bit Score: 435.09 E-value: 7.46e-146
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 54 LSEGGMKTAVITKLFPTRSHTVAAQGGVNAAL-GNMNP-DNWRWHFYDTVKGSDWLGDQDAIHYMTREAERAIIELENYG 131
Cdd:PRK06452 24 IASAGFKVAVISKVFPTRSHSAAAEGGIAAYIpGNSDPnDNPDYMTYDTVKGGDYLVDQDAAELLSNKSGEIVMLLERWG 103
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 132 MPFSRTTDGKIYQRAFGGQSNDfgrggqahRTCCVADRTGHSLLHTLYGASLQYDCNYFVEYFALDLIMDKGKCIGVVAL 211
Cdd:PRK06452 104 ALFNRQPDGRVAVRYFGGQTYP--------RTRFVGDKTGMALLHTLFERTSGLNVDFYNEWFSLDLVTDNKKVVGIVAM 175
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 212 DIETGQIHRFRAKNTVLATGGYGRAYFSCTSAHTCTGDGTALTARAGIRNSDMEFVQFHPTGIYGVGCLITEGSRGEGGY 291
Cdd:PRK06452 176 QMKTLTPFFFKTKAVVLATGGMGMLYRHTTNSYINTGDGFGIALRAGAALKDPEFVQFHPTALYPSDVLISEAARGEGGI 255
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 292 LVNSQGERFMERYAPNAKDLASRDVVSRAMTMEINEGRGVgPNkDHIYLQLHHLPAEQLQQRLPGISETAQIFAGVDVTK 371
Cdd:PRK06452 256 LKNVKGERFMTKYAPKKLDLAPRDIVSRAIITEIREGRGF-PG-GYVGLDLTHLGEEYIKERLALAVEAAKSFAGVDAFT 333
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 372 EPIPVIPTVHYNMGGVptnykgqvlDFTPEGGDKVIPGLYAAGECAAHSVHGANRLGANSLLDLVIFGRSCALTILNENK 451
Cdd:PRK06452 334 EPIPVRPAQHYYMGGI---------DVDIDGRNPDIVGLFSAGEAACVSVHGANRLGSNSLLDTLVFGQVTGRTVVQFLK 404
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 452 PGDSIPELPVNCE-EKSCDNLNGLLHSKGDISSIELRQKMQMTMQKHAAVFRRGDLLKEGVDKMSSIYKEQQNLKAcADS 530
Cdd:PRK06452 405 SNPGNPTSNYEKEaEKVVDDAYKFVKSESGVHFGQILEKLRDTMWDYVGIYRDEGGLLNAMSEINKLRGMISNMYV-TDK 483
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 531 GKVWNSELVETLELQNLLINANQTIVAAENRTESRGAHARDDFQERIdeydysnplegqqkkpfDQHWRKHSIIGIDTKT 610
Cdd:PRK06452 484 SKVYNTEFFNALELRNMLDLALVIAKSALERKESRGAHYRTDYPDRD-----------------DNNWLKHTIAYLRGNT 546
|
570 580 590
....*....|....*....|....*....|
gi 17505833 611 gaVDLTYRPVidktldkSETDWvPPKVRSY 640
Cdd:PRK06452 547 --VEVTFKPV-------KITRW-KPEPRVY 566
|
|
| SdhA |
COG1053 |
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and ... |
54-440 |
7.14e-142 |
|
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and conversion]; Succinate dehydrogenase/fumarate reductase, flavoprotein subunit is part of the Pathway/BioSystem: TCA cycle
Pssm-ID: 440673 [Multi-domain] Cd Length: 443 Bit Score: 420.01 E-value: 7.14e-142
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 54 LSEGGMKTAVITKLFPTRSHTVAAQGGVNAALGNMN----PDNWRWHFYDTVKGSDWLGDQDAIHYMTREAERAIIELEN 129
Cdd:COG1053 22 AAEAGLKVLVLEKVPPRGGHTAAAQGGINAAGTNVQkaagEDSPEEHFYDTVKGGDGLADQDLVEALAEEAPEAIDWLEA 101
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 130 YGMPFSRTTDGKIYQraFGGQSndfgrggqAHRTCCVADRTGHSLLHTLYGASLQYDCNYFVEYFALDLIMDKGKCIGVV 209
Cdd:COG1053 102 QGVPFSRTPDGRLPQ--FGGHS--------VGRTCYAGDGTGHALLATLYQAALRLGVEIFTETEVLDLIVDDGRVVGVV 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 210 ALDiETGQIHRFRAKNTVLATGGYGRAY------------FSCTSAHTCTGDGTALTARAGIRNSDMEFVQFHPTGIYGV 277
Cdd:COG1053 172 ARD-RTGEIVRIRAKAVVLATGGFGRNYemraeylpeaegALSTNAPGNTGDGIAMALRAGAALADMEFVQFHPTGLPGD 250
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 278 GCLITEGSRG-EGGYLVNSQGERFMERYAPnakdlasRDVVSRAMTMEINEG------------------RGVGPNKDHI 338
Cdd:COG1053 251 GGLISEGARGkPGGILVNKEGERFMNEYAP-------RDVVSRAILEEIDEPaylvldlrhrrrleeyleAGYLVKADTI 323
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 339 --YLQLHHLPAEQLQQRLPGISETAQifAGVDVTKE-----------PIPVIPTVHYNMGGVPTNYKGQVLDftpeGGDK 405
Cdd:COG1053 324 eeLAAKLGIDAAELAATVARYNAAAK--AGVDPRGTclgpikegpfyAIPVRPGVHYTMGGLRVDADARVLD----ADGT 397
|
410 420 430
....*....|....*....|....*....|....*
gi 17505833 406 VIPGLYAAGECAAhSVHGANRLGANSLLDLVIFGR 440
Cdd:COG1053 398 PIPGLYAAGEAAG-SVHGANRLGGNSLGDALVFGR 431
|
|
| FAD_binding_2 |
pfam00890 |
FAD binding domain; This family includes members that bind FAD. This family includes the ... |
54-432 |
6.10e-134 |
|
FAD binding domain; This family includes members that bind FAD. This family includes the flavoprotein subunits from succinate and fumarate dehydrogenase, aspartate oxidase and the alpha subunit of adenylylsulphate reductase.
Pssm-ID: 395718 [Multi-domain] Cd Length: 398 Bit Score: 398.20 E-value: 6.10e-134
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 54 LSEGGMKTAVITKLFPTRSHTVAAQGGVNAAL-GNM-NPDNWRWHFYDTVKGSDWLGDQDAIHYMTREAERAIIELENYG 131
Cdd:pfam00890 18 AAEAGLKVAVVEKGQPFGGATAWSSGGIDALGnPPQgGIDSPELHPTDTLKGLDELADHPYVEAFVEAAPEAVDWLEALG 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 132 MPFSRTTDGKIYQRAFGGQSNDFgrggqahRTCC-VADR-----TGHSLLHTLYGASLQYDCNYFVEYFALDLIMDKGKC 205
Cdd:pfam00890 98 VPFSRTEDGHLDLRPLGGLSATW-------RTPHdAADRrrglgTGHALLARLLEGLRKAGVDFQPRTAADDLIVEDGRV 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 206 IGVVALDIETGQIHRFRAK-NTVLATGGYGR---------AYFSCTSAHTCTGDGTALTARAGIRNSD--MEFVQFHPTG 273
Cdd:pfam00890 171 TGAVVENRRNGREVRIRAIaAVLLATGGFGRlaelllpaaGYADTTNPPANTGDGLALALRAGAALTDdlMEFVQFHPTS 250
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 274 IYGV----GCLItEGSRGEGGYLVNSQGERFMeryapnaKDLASRDVVSRAMTM-EINEGRGvgpnkDHIYLQLHH-LPA 347
Cdd:pfam00890 251 LVGIrlgsGLLI-EALRGEGGILVNKDGRRFM-------NELASRDVVSRAITRnEIDEGRG-----ANVYLDASGsLDA 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 348 EQLQQRLPGISETAQIFAGVDVTKEPIPVIPTVHYNMGGVPTNYKGQVLDftpeGGDKVIPGLYAAGECAAHSVHGANRL 427
Cdd:pfam00890 318 EGLEATLPAINEEAIFGLDVDPYDRPIPVFPAQHYTMGGVRTDENGRVLD----ADGQPIPGLYAAGEVACGGVHGANRL 393
|
....*
gi 17505833 428 GANSL 432
Cdd:pfam00890 394 GGNSL 398
|
|
| PRK08626 |
PRK08626 |
fumarate reductase flavoprotein subunit; Provisional |
56-578 |
1.29e-131 |
|
fumarate reductase flavoprotein subunit; Provisional
Pssm-ID: 181507 [Multi-domain] Cd Length: 657 Bit Score: 401.28 E-value: 1.29e-131
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 56 EGGMKTAVITKLFPTRSHTVAAQGGVNAALGNMNP---DNWRWHFYDTVKGSDWLGDQDAIHYMTREAERAIIELENYGM 132
Cdd:PRK08626 26 QRGLDTIVLSLVPAKRSHSAAAQGGMQASLGNAVKgegDNEDVHFADTVKGSDWGCDQEVARMFVHTAPKAVRELAAWGV 105
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 133 PFSRTTDGKiyQRAF-GGQ---------------SNDFGrGGQAHRTCCVADRTGHSLLHTLYGASLQYDCNYFVEYFAL 196
Cdd:PRK08626 106 PWTRVTAGP--RTVViNGEkvtitekeeahglinARDFG-GTKKWRTCYTADGTGHTMLYAVDNEAIKLGVPVHDRKEAI 182
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 197 DLIMDKGKCIGVVALDIETGQIHRFRAKNTVLATGGYGRAYFSCTSAHTCTGDGTALTARAGI-RNSDMEFVQFHPTGIY 275
Cdd:PRK08626 183 ALIHDGKRCYGAVVRCLITGELRAYVAKATLIATGGYGRIYKVTTNAVICEGIGAAIALETGVaPLGNMEAVQFHPTAIV 262
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 276 GVGCLITEGSRGEGGYLVNSQGERFMERYAPNAKDLASRDVVSRAMTMEINEGRGV-GPNKDHIYLQLHHLPAEQLQQRL 354
Cdd:PRK08626 263 PSGILVTEGCRGDGGLLRDKDGYRFMPDYEPEKKELASRDVVSRRMTEHIRKGKGVkSPYGPHLWLDIRILGRKHIETNL 342
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 355 PGISETAQIFAGVDVTKEPIPVIPTVHYNMGGVPTNYKGQVldftpeggdKVIPGLYAAGECAAHSVHGANRLGANSLLD 434
Cdd:PRK08626 343 REVQEICENFLGIDPAKDWIPVRPTQHYSMGGIRTNPTGES---------YGLKGLFSAGEAACWDMHGFNRLGGNSLAE 413
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 435 LV----IFGRSCALTILNENkpGDSIPELPVNCEEKSCDNLNGLLHSKGDISSIELRQKMQMTMQKHAAVFRRGDLLKEG 510
Cdd:PRK08626 414 TVvagmIVGKYVADFCLGNE--LEIDTALVEKFVKKQQDRIDELIAGEGKENVFEIKNEMQEIMMEKVGIFRNGPELEKA 491
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 17505833 511 VDKMSSIYKEQQNLKAcADSGKVWNSELVETLELQNLLINANQTIVAAENRTESRGAHARDDFQERID 578
Cdd:PRK08626 492 VKELQELLERSKNIGL-KSKKRGANPELEEALRVPRMLKLALCVAYGALARTESRGAHAREDYPKRND 558
|
|
| sdhA |
PRK06263 |
succinate dehydrogenase flavoprotein subunit; Reviewed |
74-580 |
1.39e-129 |
|
succinate dehydrogenase flavoprotein subunit; Reviewed
Pssm-ID: 235758 [Multi-domain] Cd Length: 543 Bit Score: 392.42 E-value: 1.39e-129
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 74 TVAAQGGVNAALgnmNP-DNWRWHFYDTVKGSDWLGDQDAIHYMTREAERAIIELENYGMPFSRTTDGKIYQRAFGGQSn 152
Cdd:PRK06263 46 TVMAEGGYNAVL---NPeDSFEKHFEDTMKGGAYLNDPKLVEILVKEAPKRLKDLEKFGALFDRTEDGEIAQRPFGGQS- 121
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 153 dfgrggqAHRTCCVADRTGHSLLHTLYGASLQYDCNYFVEYFALDLIMDKGK-CIGVVALDIETGQIHRFRAKNTVLATG 231
Cdd:PRK06263 122 -------FNRTCYAGDRTGHEMMMGLMEYLIKERIKILEEVMAIKLIVDENReVIGAIFLDLRNGEIFPIYAKATILATG 194
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 232 GYGRAYFSCTSAHTCTGDGTALTARAGIRNSDMEFVQFHPTGI----YGVGCLITEGSRGEGGYLVNSQGERFMERYAPN 307
Cdd:PRK06263 195 GAGQLYPITSNPIQKTGDGFAIAYRAGAELIDMEMVQFHPTGMvypySGRGILVTEAVRGEGGILYNKNGERFMKRYDPE 274
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 308 AKDLASRDVVSRAMTMEINEGRGVgpNKDHIYLQLHHLPAEQLQQRLPGISETAQIFaGVDVTKEPIPVIPTVHYNMGGV 387
Cdd:PRK06263 275 RMELSTRDVVARAIYTEIQEGRGT--NHGGVYLDVTHLPDEVIEEKLETMLEQFLDV-GVDIRKEPMEVAPTAHHFMGGI 351
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 388 PTNYKGQvldfTPeggdkvIPGLYAAGEcAAHSVHGANRLGANSLLDLVIFGRSCALTILnENKPGDSIPELPVNCEEKS 467
Cdd:PRK06263 352 RINEDCE----TN------IPGLFACGE-VAGGVHGANRLGGNALADTQVFGAIAGKSAA-KNAENNEFKKVNRSVEEDI 419
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 468 CDNLNGLLHSKGDISSIELRQKMQMTMQKHAAVFRRGDLLKEGVDKMSSIYKEQQNLKAcadSGKVwnsELVETLELQNL 547
Cdd:PRK06263 420 ARIKSEIKFLNGSINPYDLIDELKKTMWDYVSIVRNEKGLKKALEEINELKEKLKDLKV---NGIV---DFNKALELENM 493
|
490 500 510
....*....|....*....|....*....|...
gi 17505833 548 LINANQTIVAAENRTESRGAHARDDFQERIDEY 580
Cdd:PRK06263 494 ILVAELVIKSALLRKESRGAHYREDYPETNDEW 526
|
|
| sdhA |
PRK07803 |
succinate dehydrogenase flavoprotein subunit; Reviewed |
56-619 |
9.85e-124 |
|
succinate dehydrogenase flavoprotein subunit; Reviewed
Pssm-ID: 236101 [Multi-domain] Cd Length: 626 Bit Score: 379.77 E-value: 9.85e-124
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 56 EGGMKTAVITKLFPTRSHTVAAQGGVNAALGNMNP-DNWRWHFYDTVKGSDWLGDQDAIHYMTREAERAIIELENYGMPF 134
Cdd:PRK07803 29 ERGLRVAVVCKSLFGKAHTVMAEGGCAAAMGNVNPkDNWQVHFRDTMRGGKFLNNWRMAELHAKEAPDRVWELETYGALF 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 135 SRTTDGKIYQRAFGGQSndFGRggQAHrtccVADRTGHSLLHTL--YGASLQ---------YDCNY--FVEYFALDLIMD 201
Cdd:PRK07803 109 DRTKDGRISQRNFGGHT--YPR--LAH----VGDRTGLELIRTLqqKIVSLQqedhaelgdYEARIkvFAECTITELLKD 180
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 202 KGKCIGVVALDIETGQIHRFRAKNTVLATGGYGRAYFSCTSAHTCTGDGTALTARAGIRNSDMEFVQFHPTGIY---GV- 277
Cdd:PRK07803 181 GGRIAGAFGYWRESGRFVLFEAPAVVLATGGIGKSFKVTSNSWEYTGDGHALALRAGATLINMEFVQFHPTGMVwppSVk 260
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 278 GCLITEGSRGEGGYLVNSQGERFMERYAP----------------------NAK---DLASRDVVSRAMTMEINEGRGvg 332
Cdd:PRK07803 261 GILVTEGVRGDGGVLKNSEGKRFMFDYIPdvfkgqyaeteeeadrwykdndNNRrppELLPRDEVARAINSEVKAGRG-- 338
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 333 pnKDH--IYLQLH-HLPAEQLQQRLPGISETAQIFAGVDVTKEPIPVIPTVHYNMGGVPTNykgqvldftPEGGDKVIPG 409
Cdd:PRK07803 339 --SPHggVYLDIAsRLPAEEIKRRLPSMYHQFKELADVDITKEPMEVGPTCHYVMGGVEVD---------PDTGAATVPG 407
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 410 LYAAGECAAhSVHGANRLGANSLLDLVIFGRSCALTILNENKPGDSIPELPV-NCEEKSCDNLNGLLHSKGDISSIELRQ 488
Cdd:PRK07803 408 LFAAGECAG-GMHGSNRLGGNSLSDLLVFGRRAGLGAADYVRGLGSRPAVSEeAVDAAAREALAPFERPAGAENPYTLHA 486
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 489 KMQMTMQKHAAVFRRGDLLKEGVDKMSSIYKEQQNLKAcaDSGKVWNSELVETLELQNLLINANQTIVAAENRTESRGAH 568
Cdd:PRK07803 487 ELQQTMNDLVGIIRKEDEIEQALEKLAELKERAANVSV--EGHRQYNPGWHLALDLRNMLLVSECVARAALERTESRGGH 564
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|..
gi 17505833 569 ARDDFQErideydysnplegqqkkpFDQHWRKHSII-GIDTKTGAVDLTYRP 619
Cdd:PRK07803 565 TRDDHPG------------------MDPEWRRINLVcRADPVGGHVTVTRQP 598
|
|
| PLN02815 |
PLN02815 |
L-aspartate oxidase |
62-578 |
5.65e-98 |
|
L-aspartate oxidase
Pssm-ID: 215436 [Multi-domain] Cd Length: 594 Bit Score: 312.03 E-value: 5.65e-98
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 62 AVITKLFPTRSHTVAAQGGVNAALgnmNP-DNWRWHFYDTVKGSDWLGDQDAIHYMTREAERAIIELENYGMPFSRTTDG 140
Cdd:PLN02815 55 AIITKDEPHESNTNYAQGGVSAVL---DPsDSVESHMRDTIVAGAFLCDEETVRVVCTEGPERVKELIAMGASFDHGEDG 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 141 KIYQRAFGGQSNdfgrggqaHRTCCVADRTGHSLLHTLYGASLQYDCNYFVEY-FALDLIMDKG----KCIGVVALDIET 215
Cdd:PLN02815 132 NLHLAREGGHSH--------HRIVHAADMTGREIERALLEAVKNDPNITFFEHhFAIDLLTSQDggsiVCHGADVLDTRT 203
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 216 GQIHRFRAKNTVLATGGYGRAYFSCTSAHTCTGDGTALTARAGIRNSDMEFVQFHPTGIYGVGC------------LITE 283
Cdd:PLN02815 204 GEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGIAMAHRAQAVVSNMEFVQFHPTALADEGLpikpakarenafLITE 283
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 284 GSRGEGGYLVNSQGERFMERYAPNAkDLASRDVVSRAMTMEINEGrgvgpNKDHIYLQLHHLPAEQLQQRLPGI-SETAQ 362
Cdd:PLN02815 284 AVRGDGGILYNLAGERFMPLYDERA-ELAPRDVVARSIDDQLKKR-----NEKYVLLDISHKPREEILSHFPNIaAECLK 357
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 363 IfaGVDVTKEPIPVIPTVHYNMGGVPTNYKGQVldftpeggdkVIPGLYAAGECAAHSVHGANRLGANSLLDLVIFGRSC 442
Cdd:PLN02815 358 R--GLDITKQPIPVVPAAHYMCGGVRTGLQGET----------NVQGLYAAGEVACTGLHGANRLASNSLLEALVFARRA 425
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 443 AltilneNKPGDSIPELPVNCEE-----KSCDNLNGLLHSKGDISSI--ELRQKMQMTMQKHAAVFRRGDLLKEGVDKMS 515
Cdd:PLN02815 426 V------QPSIDHMARALRDVSAaaawaRPVAPTALADSVMDEILEWtaVVRKELQRIMWNYVGIVRSTERLETAERKLE 499
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 17505833 516 SIYKE-QQNLKacadsGKVWNSELV--ETLELQNLLINANQTIVAAENRTESRGAHARDDFQERID 578
Cdd:PLN02815 500 ELEAEwEAILF-----RHGWKPTMVglEACEMRNLFCVAKLVVSSALARKESRGLHYTTDYPELVE 560
|
|
| PRK08071 |
PRK08071 |
L-aspartate oxidase; Provisional |
63-576 |
1.40e-97 |
|
L-aspartate oxidase; Provisional
Pssm-ID: 236147 [Multi-domain] Cd Length: 510 Bit Score: 308.46 E-value: 1.40e-97
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 63 VITKLFPTRSHTVAAQGGVNAALGNMnpDNWRWHFYDTVKGSDWLGDQDAIHYMTREAERAIIELENYGMPFSRTTDGKI 142
Cdd:PRK08071 30 IITKKTKRNSNSHLAQGGIAAAVATY--DSPNDHFEDTLVAGCHHNNERAVRYLVEEGPKEIQELIENGMPFDGDETGPL 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 143 YqrafggqsndFGRGGqAHRTCCV----ADRTGHSLLHTLYGASLQYdcNYFVEY-FALDLIMDKGKCIGVVALDiETGQ 217
Cdd:PRK08071 108 H----------LGKEG-AHRKRRIlhagGDATGKNLLEHLLQELVPH--VTVVEQeMVIDLIIENGRCIGVLTKD-SEGK 173
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 218 IHRFRAKNTVLATGGYGRAYFSCTSAHTCTGDGTALTARAGIRNSDMEFVQFHPTGIY--GVGC-LITEGSRGEGGYLVN 294
Cdd:PRK08071 174 LKRYYADYVVLASGGCGGLYAFTSNDKTITGDGLAMAYRAGAELVDLEFIQFHPTMLYanGRCVgLVSEAVRGEGAVLIN 253
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 295 SQGERFMERYAPnAKDLASRDVVSRAMTMEINEGRGVgpnkdhiYLQLHHLPaeQLQQRLPGISETAQIfAGVDVTKEPI 374
Cdd:PRK08071 254 EDGRRFMMGIHP-LADLAPRDVVARAIHEELLSGEKV-------YLNISSIQ--NFEERFPTISALCEK-NGVDIETKRI 322
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 375 PVIPTVHYNMGGVPTNykgqvldftpEGGDKVIPGLYAAGECAAHSVHGANRLGANSLLDLVIFGRSCALTILNENKPGD 454
Cdd:PRK08071 323 PVVPGAHFLMGGVKTN----------LDGETSIPGLYAIGEVACTGVHGANRLASNSLLEGLVFGKRAAEHILTKATKPR 392
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 455 SIPELPvnceekscdnlngllHSKGDISSIEL--RQKMQMTMQKHAAVFRRGDLLKEGVDKMSSIYKEQQNLKACADSgk 532
Cdd:PRK08071 393 LNPFAE---------------KEKKFIVLNHLptKEEIQEKMMKYVGIVRTEQSLSEAKRWLEKYGVRNMILDHDALT-- 455
|
490 500 510 520
....*....|....*....|....*....|....*....|....
gi 17505833 533 vwnselVETLELQNLLINANQTIVAAENRTESRGAHARDDFQER 576
Cdd:PRK08071 456 ------NEEIELSHMLTVAKLIVVSALQRTESRGGHYRSDYPHR 493
|
|
| nadB |
TIGR00551 |
L-aspartate oxidase; L-aspartate oxidase is the B protein, NadB, of the quinolinate synthetase ... |
62-573 |
6.30e-95 |
|
L-aspartate oxidase; L-aspartate oxidase is the B protein, NadB, of the quinolinate synthetase complex. Quinolinate synthetase makes a precursor of the pyridine nucleotide portion of NAD. This model identifies proteins that cluster as L-aspartate oxidase (a flavoprotein difficult to separate from the set of closely related flavoprotein subunits of succinate dehydrogenase and fumarate reductase) by both UPGMA and neighbor-joining trees. The most distant protein accepted as an L-aspartate oxidase (NadB), that from Pyrococcus horikoshii, not only clusters with other NadB but is just one gene away from NadA. [Biosynthesis of cofactors, prosthetic groups, and carriers, Pyridine nucleotides]
Pssm-ID: 273131 [Multi-domain] Cd Length: 489 Bit Score: 300.95 E-value: 6.30e-95
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 62 AVITKLFPTRSHTVAAQGGVNAALgnMNPDNWRWHFYDTVKGSDWLGDQDAIHYMTREAERAIIELENYGMPFSRTTDGK 141
Cdd:TIGR00551 28 SVITKASVTDSNSYYAQGGIAAAL--AETDSIDAHVEDTLAAGAGICDEEAVWFVVSDGSEAVQFLVSHGVTFDRNEQGG 105
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 142 IYQRAFGGQSNdfgrggqaHRTCCVADRTGHSLLHTLYGASLQY-DCNYFVEYFALDLIMDKGKCIGVVALDIETGQIhr 220
Cdd:TIGR00551 106 VALTREGGHSY--------PRIFHAGDATGREIIPTLEKHARSEpNVNIIEGEFALDLLIETGRCAGVFVQGSGTLET-- 175
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 221 FRAKNTVLATGGYGRAYFSCTSAHTCTGDGTALTARAGIRNSDMEFVQFHPTGIYGVGC---LITEGSRGEGGYLVNSQG 297
Cdd:TIGR00551 176 LHADAVVLATGGFGGLYRFTTNPKNSTGDGIALAWRAGVPVRDLEFVQFHPTALIKPRVryfLITEAVRGEGAKLVDRDG 255
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 298 ERFMERYAPNAkDLASRDVVSRAMTMEINEGrgvgpNKDHIYLQLHHLPAeqLQQRLPGISETAQiFAGVDVTKEPIPVI 377
Cdd:TIGR00551 256 ERFMADRHPRG-ELAPRDIVARAIDMEMAEG-----GGDCVFLDASGIEN--FKDRFPTIYAVCR-GAGIDPEREPIPVA 326
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 378 PTVHYNMGGVPTNYKGQVldftpeggdkVIPGLYAAGECAAHSVHGANRLGANSLLDLVIFGRSCALTILNENKPGDSIP 457
Cdd:TIGR00551 327 PGAHYTMGGISVDAFGRT----------TIPGLYAIGETACTGLHGANRLASNSLLECLVFGLRAARTISREPPYASREY 396
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 458 ELPVNCEEKS--CDNLNGLLHSKGDISSIelrqkmqmtMQKHAAVFRRGDLLKEGVDKMssiykeqqnlkacadsgKVWN 535
Cdd:TIGR00551 397 QSGVWDEPRSenPLDRHELQHKMSSLRSV---------LWNHAGIVRLEWSLREALRKL-----------------VEIQ 450
|
490 500 510
....*....|....*....|....*....|....*...
gi 17505833 536 SELVETLELQNLLINANQTIVAAENRTESRGAHARDDF 573
Cdd:TIGR00551 451 DEVDERMELSNLKLVAKLVTISALKREESRGAHYRLDY 488
|
|
| sdhA |
PRK08641 |
succinate dehydrogenase flavoprotein subunit; Reviewed |
71-640 |
3.20e-94 |
|
succinate dehydrogenase flavoprotein subunit; Reviewed
Pssm-ID: 236319 [Multi-domain] Cd Length: 589 Bit Score: 301.89 E-value: 3.20e-94
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 71 RSHTVAAQGGVNAALGNMNPDNWRW-HFYDTVKGSDWLGDQDAIHYMTREAERAIIELENYGMPFSRTTDGKIYQRAFGG 149
Cdd:PRK08641 39 RSHSVCAQGGINGAVNTKGEGDSPWiHFDDTVYGGDFLANQPPVKAMCEAAPGIIHLLDRMGVMFNRTPEGLLDFRRFGG 118
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 150 QsndfgrggQAHRTCCVADRTGHSLLHTLYGASLQYDCNYFVEYFA----LDLIMD-KGKCIGVVALDIETGQIHRFRAK 224
Cdd:PRK08641 119 T--------LHHRTAFAGATTGQQLLYALDEQVRRYEVAGLVTKYEgwefLGAVLDdEGVCRGIVAQDLFTMEIESFPAD 190
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 225 NTVLATGGYGRAYFSCTSAHTCTGDGTALTARAGIRNSDMEFVQFHPTGIYGVGC--LITEGSRGEGGYL-VNSQGER-- 299
Cdd:PRK08641 191 AVIMATGGPGIIFGKSTNSTINTGSAASRVYQQGAYYANGEFIQIHPTAIPGDDKlrLMSESARGEGGRVwTYKDGKPwy 270
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 300 FMERYAPNAKDLASRDVVSRAMTME-INEGRGVGpNKDHIYLQLHHLPAEQLQQRLPGISETAQIFAGVDVTKEPIPVIP 378
Cdd:PRK08641 271 FLEEKYPAYGNLVPRDIATREIFDVcVEQKLGIN-GENMVYLDLSHKDPKELDIKLGGILEIYEKFTGDDPRKVPMKIFP 349
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 379 TVHYNMGGVPTNYKGQVldftpeggdkVIPGLYAAGECaAHSVHGANRLGANSLLDLV----IFGRSCALTILNENKPGD 454
Cdd:PRK08641 350 AVHYSMGGLWVDYDQMT----------NIPGLFAAGEC-DYSYHGANRLGANSLLSAIyggmVAGPNAVEYIKGLGKSAD 418
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 455 SIPELPVNCEEKS-CDNLNGLLHSKGDISSIELRQKMQMTMQKHAAVFRRGDLLKEGVDKMSSIYKEQQNLKaCADSGKV 533
Cdd:PRK08641 419 DVSSSVFEQALKQeQEKFDNILSMDGTENAYVLHKELGEWMTDNVTVVRENDKLLETDEKIQELMERYKRIS-VNDTSRW 497
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 534 WNSELVETLELQNLLINANQTIVAAENRTESRGAHARDDFQERIDEydysnplegqqkkpfdqHWRKHSIIGIDTKTGAV 613
Cdd:PRK08641 498 SNQGASFTRQLWNMLELARVITIGALNRNESRGAHYKPEFPERNDE-----------------NWLKTTMATYTPEGEEP 560
|
570 580
....*....|....*....|....*..
gi 17505833 614 DLTYRPVidktldksETDWVPPKVRSY 640
Cdd:PRK08641 561 EFSYEDV--------DTSLIPPRKRDY 579
|
|
| sdhA_Bsu |
TIGR01811 |
succinate dehydrogenase or fumarate reductase, flavoprotein subunit, Bacillus subtilis ... |
57-640 |
5.26e-94 |
|
succinate dehydrogenase or fumarate reductase, flavoprotein subunit, Bacillus subtilis subgroup; This model represents the succinate dehydrogenase flavoprotein subunit as found in the low-GC Gram-positive bacteria and a few other lineages. This enzyme may act in a complete or partial TCA cycle, or act in the opposite direction as fumarate reductase. In some but not all species, succinate dehydrogenase and fumarate reductase may be encoded as separate isozymes. [Energy metabolism, TCA cycle]
Pssm-ID: 130870 [Multi-domain] Cd Length: 603 Bit Score: 301.77 E-value: 5.26e-94
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 57 GGMKTAVI------TKLF-----PTRSHTVAAQGGVNAALGNMNPDNWRW-HFYDTVKGSDWLGDQDAIHYMTREAERAI 124
Cdd:TIGR01811 10 GGMAAAKLaelgyhVKLFsyvdaPRRAHSIAAQGGINGAVNTKGDGDSPWrHFDDTVKGGDFRARESPVKRLAVASPEII 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 125 IELENYGMPFSRTTDGKIYQRAFGGQsndfgrggQAHRTCCVADRTGHSLLHTLYGASLQYDCNYFVEYFA----LDLIM 200
Cdd:TIGR01811 90 DLMDAMGVPFAREYGGLLDTRSFGGV--------QVSRTAYARGQTGQQLLLALDSALRRQIAAGLVEKYEgwemLDIIV 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 201 -DKGKCIGVVALDIETGQIHRFRAKNTVLATGGYGRAYFSCTSAHTCTGDGTALTARAGIRNSDMEFVQFHPTGIYGVGC 279
Cdd:TIGR01811 162 vDGNRARGIIARNLVTGEIETHSADAVILATGGYGNVFGKSTNAMNSNASAAWRAYEQGAYFANPEFIQIHPTAIPVDGT 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 280 ------LITEGSRGEG----------GYLVNS--QGER--FMERYAPNAKDLASRDVVSRAMTMEINEGRGVGPNKDHIY 339
Cdd:TIGR01811 242 wqsklrLMSESLRNDGriwtpkekndNRDPNTipEDKRdyFLERRYPAFGNLVPRDIASRAIFQVCDAGKGVGPGENAVY 321
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 340 LQLHH----LPAEQLQQRLPGISETAQIFAGVDVTKEPIPVIPTVHYNMGGVPTNYKGQVldftpeggdkVIPGLYAAGE 415
Cdd:TIGR01811 322 LDFSDaderLGRKEIDAKYGNLFEMYEKFTGDDPYKVPMRIFPAVHYTMGGLWVDYDQMT----------NIPGLFAAGE 391
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 416 CaAHSVHGANRLGANSLLDlVIFGRSCAL-----TILNENKPGDSIPE-LPVNCEE--KSCDNLNGLLHSKGDISSIELR 487
Cdd:TIGR01811 392 C-DFSQHGANRLGANSLLS-AIADGYFALpftipNYLGPELSSEDMPEdAPEFQAAlaEEQERFDRLLKMRGDENPYYLH 469
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 488 QKMQMTMQKHAAVFRRGDLLKEGVDKMSSIYKEQQNLKACADSGKVWNSELVETLELQNLLINANQTIVAAENRTESRGA 567
Cdd:TIGR01811 470 RELGEIMTENCGVSRNNEKLLKTDEKIRELRERFWKNIDIPGTTKESNQVLEFARRVADYLELAELMCLDALNRNESCGA 549
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 17505833 568 HARDDFQERIDEYDYSnplegqqkkpfDQHWRKHSIIGIDTKTGAVDLTYRPVIDKTldksetdwVPPKVRSY 640
Cdd:TIGR01811 550 HFRPEFPTPDGEAERN-----------DEEFLKVTAWEFQGENDAPEFHYEELDFEL--------VPPRKRDY 603
|
|
| PRK07395 |
PRK07395 |
L-aspartate oxidase; Provisional |
60-604 |
1.25e-90 |
|
L-aspartate oxidase; Provisional
Pssm-ID: 236010 [Multi-domain] Cd Length: 553 Bit Score: 291.56 E-value: 1.25e-90
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 60 KTAVITKLFPTRSHTVAAQGGVNAALGNMnpDNWRWHFYDTVKGSDWLGDQDAIHYMTREAERAIIELENYGMPFSRTTD 139
Cdd:PRK07395 33 RVGLITKDTLKTSASDWAQGGIAAAIAPD--DSPKLHYEDTLKAGAGLCDPEAVRFLVEQAPEAIASLVEMGVAFDRHGQ 110
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 140 gkiyQRAFGGQSndfgrggqAH---RTCCVADRTGHSLLHTLYGASLQY-DCNYFVEYFALDLIMD--KGKCIGVVALdi 213
Cdd:PRK07395 111 ----HLALTLEA--------AHsrpRVLHAADTTGRAIVTTLTEQVLQRpNIEIISQALALSLWLEpeTGRCQGISLL-- 176
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 214 ETGQIHRFRAKNTVLATGGYGRAYFSCTSAHTCTGDGTALTARAGIRNSDMEFVQFHPTGIYGVGC---LITEGSRGEGG 290
Cdd:PRK07395 177 YQGQITWLRAGAVILATGGGGQVFAQTTNPAVSTGDGVALAWRAGAQLRDLEFFQFHPTALTKPGAprfLISEAVRGEGA 256
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 291 YLVNSQGERFMERYAPnAKDLASRDVVSRAMTMEINEgRGVGPNKDHIYLQLHHLPAEQLQQRLPGISETAQIFaGVDVT 370
Cdd:PRK07395 257 HLVDAQGRRFAFDYHP-AGELAPRDVVSRAIFSHLQK-TATDPATAHVWLDLRPIPAERIRRRFPNIIRVCQKW-GIDVF 333
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 371 KEPIPVIPTVHYNMGGVPTNYKGQVldftpeggdkVIPGLYAAGECAAHSVHGANRLGANSLLDLVIFGRSCA---LTIL 447
Cdd:PRK07395 334 QEPIPVAPAAHYWMGGVVTDLNNQT----------SIPGLYAVGETASTGVHGANRLASNSLLECLVFAAQLAqleLPIE 403
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 448 NENKPGDSIPELPVNCEekscdnlngllHSKGDISSIE-LRQKMQMTMQKHAAVFRRGDLLKEGVDKMSSIYKEQQNLKA 526
Cdd:PRK07395 404 PPASPDLPPISFIIDAS-----------QWKNEQEQIQrIRQELPELVWQSAGICREADTLERAIAQVEQWQQQLAALPL 472
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 527 C--------ADSGKVWNSELVETL----ELQNLLINANQTIVAAENRTESRGAHARDdfqerideyDYSNPlegqqkkpf 594
Cdd:PRK07395 473 SqflanlppGQTVSFNGPDAEQQLrlwaETRNLLDIAYLILKSALFRTESRGGHYRL---------DYPQT--------- 534
|
570
....*....|
gi 17505833 595 DQHWRKHSII 604
Cdd:PRK07395 535 DPAWQVHTLV 544
|
|
| PRK07512 |
PRK07512 |
L-aspartate oxidase; Provisional |
77-576 |
6.03e-90 |
|
L-aspartate oxidase; Provisional
Pssm-ID: 236036 [Multi-domain] Cd Length: 513 Bit Score: 288.35 E-value: 6.03e-90
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 77 AQGGVNAALGNmnPDNWRWHFYDTVKGSDWLGDQDAIHYMTREAERAIIELENYGMPFSRTTDGKIyqrAFGGQSndfgr 156
Cdd:PRK07512 50 AQGGIAAALGP--DDSPALHAADTLAAGAGLCDPAVAALITAEAPAAIEDLLRLGVPFDRDADGRL---ALGLEA----- 119
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 157 ggqAH---RTCCVA-DRTGHSLLHTLYGASLQYDCNYFVE-YFALDLIMDKGKCIGVVAldIETGQIHRFRAKNTVLATG 231
Cdd:PRK07512 120 ---AHsrrRIVHVGgDGAGAAIMRALIAAVRATPSITVLEgAEARRLLVDDGAVAGVLA--ATAGGPVVLPARAVVLATG 194
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 232 GYGRAYFSCTSAHTCTGDGTALTARAGIRNSDMEFVQFHPTGIyGVGC----LITEGSRGEGGYLVNSQGERFMERYAPN 307
Cdd:PRK07512 195 GIGGLYAVTTNPAGAFGQGLALAARAGAVIADPEFVQFHPTAI-DIGRdpapLATEALRGEGAILINEDGERFMADIHPG 273
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 308 AkDLASRDVVSRAMTMEINEGRGVgpnkdhiYLQLHHLPAEQLQQRLPGISEtAQIFAGVDVTKEPIPVIPTVHYNMGGV 387
Cdd:PRK07512 274 A-ELAPRDVVARAVFAEIAAGRGA-------FLDARAALGAHFATRFPTVYA-ACRSAGIDPARQPIPVAPAAHYHMGGI 344
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 388 PTNYKGQvldftpeggdKVIPGLYAAGECAAHSVHGANRLGANSLLDLVIFGRSCALTILNENKPGDSIPELPVNCEEKS 467
Cdd:PRK07512 345 AVDADGR----------SSLPGLWAAGEVASTGLHGANRLASNSLLEAVVFAARAAEDIAGTPAAAAAPLSAAAAPALDP 414
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 468 CDNLngllhskgdissiELRQkmqmTMQKHAAVFRRGDLLKEGVDKMSSIYKEQQnlkACADSGKVwnselvetlelqNL 547
Cdd:PRK07512 415 ADLA-------------LLRP----IMSRHVGVLRDADGLRRAIAALLPLEAGAG---PAADPATV------------AL 462
|
490 500
....*....|....*....|....*....
gi 17505833 548 LInanqtIVAAENRTESRGAHARDDFQER 576
Cdd:PRK07512 463 LI-----AVAALAREESRGAHFRTDFPLT 486
|
|
| PRK09077 |
PRK09077 |
L-aspartate oxidase; Provisional |
60-579 |
2.53e-86 |
|
L-aspartate oxidase; Provisional
Pssm-ID: 236374 [Multi-domain] Cd Length: 536 Bit Score: 279.49 E-value: 2.53e-86
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 60 KTAVITKLFPTRSHTVAAQGGVNAALGNmnPDNWRWHFYDTVKGSDWLGDQDAIHYMTREAERAIIELENYGMPFSRTTD 139
Cdd:PRK09077 32 RVAVLSKGPLSEGSTFYAQGGIAAVLDE--TDSIESHVEDTLIAGAGLCDEDAVRFIAENAREAVQWLIDQGVPFTTDEQ 109
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 140 gkiyqrAFGGQSNDFGR-GGQAHRTCC-VADRTGHSLLHTLYGASLQY-DCNYFVEYFALDLI------MDKGKCIGVVA 210
Cdd:PRK09077 110 ------ANGEEGYHLTReGGHSHRRILhAADATGKAVQTTLVERARNHpNITVLERHNAIDLItsdklgLPGRRVVGAYV 183
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 211 LDIETGQIHRFRAKNTVLATGGYGRAYFSCTSAHTCTGDGTALTARAGIRNSDMEFVQFHPTGIY---GVGCLITEGSRG 287
Cdd:PRK09077 184 LNRNKERVETIRAKFVVLATGGASKVYLYTTNPDIASGDGIAMAWRAGCRVANMEFNQFHPTCLYhpqARSFLITEALRG 263
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 288 EGGYLVNSQGERFMERYAPNAkDLASRDVVSRAMTMEINEgRGVgpnkDHIYLQLHHLPAEQLQQRLPGISETAQIFaGV 367
Cdd:PRK09077 264 EGAYLKLPDGTRFMPDFDERA-ELAPRDIVARAIDHEMKR-LGA----DCVYLDISHKPADFIRQHFPTIYERCLEL-GI 336
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 368 DVTKEPIPVIPTVHYNMGGVPTNYKGQVlDftpeggdkvIPGLYAAGECAAHSVHGANRLGANSLLDLVIFGRSCALTIL 447
Cdd:PRK09077 337 DITKEPIPVVPAAHYTCGGVMVDLHGRT-D---------LDGLYAIGEVSYTGLHGANRMASNSLLECLVYGRSAAEDIL 406
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 448 NENKPGDSIPELPVNCEEKSCDNlngllhskgDISSI------ELRQKMQ------MTMQKHAAVFRRGDLLKEGVDKMS 515
Cdd:PRK09077 407 SRLPKAPMPPTLPAWDESRVTDS---------DEEVViqhnwhELRLFMWdyvgivRTTKRLERALHRIRLLQQEIDEYY 477
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 17505833 516 SIYKEQQNLkacadsgkvwnselvetLELQNLLINANQTIVAAENRTESRGAHARDDFQERIDE 579
Cdd:PRK09077 478 ANFRVSNNL-----------------LELRNLVQVAELIVRCAMERKESRGLHYTLDYPELLPE 524
|
|
| PRK07804 |
PRK07804 |
L-aspartate oxidase; Provisional |
54-607 |
1.40e-74 |
|
L-aspartate oxidase; Provisional
Pssm-ID: 236102 [Multi-domain] Cd Length: 541 Bit Score: 248.73 E-value: 1.40e-74
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 54 LSEGGMKTAVITKLFPTRSHTVAAQGGVNAALGNMN-PDNwrwHFYDTVKGSDWLGDQDAIHYMTREAERAIIELENYGM 132
Cdd:PRK07804 35 ARRAGRRVLVVTKAALDDGSTRWAQGGIAAVLDPGDsPEA---HVADTLVAGAGLCDPDAVRSLVAEGPRAVRELVALGA 111
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 133 PFSRTTDGKIYQRAFGGQSNDfgR----GGqahrtccvaDRTGHSLLHTLYGASLQYDCNYFVEYFALDLIMDK-GKCIG 207
Cdd:PRK07804 112 RFDESPDGRWALTREGGHSRR--RivhaGG---------DATGAEVQRALDAAVRADPLDIREHALALDLLTDGtGAVAG 180
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 208 VVALDIETGQ------IHrfrAKNTVLATGGYGRAYFSCTSAHTCTGDGTALTARAGIRNSDMEFVQFHPT------GIY 275
Cdd:PRK07804 181 VTLHVLGEGSpdgvgaVH---APAVVLATGGLGQLYAATTNPAGSTGDGVALALRAGAAVSDLEFVQFHPTvlflgpAAG 257
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 276 GVGCLITEGSRGEGGYLVNSQGERFMERYAPNAkDLASRDVVSRAMTMEINEgRGVgpnkDHIYLQLHHlpAEQLQQRLP 355
Cdd:PRK07804 258 GQRPLISEAVRGEGAILVDAQGNRFMAGVHPLA-DLAPRDVVAKAIDRRMKA-TGD----DHVYLDARG--IEGFARRFP 329
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 356 GISETAQIfAGVDVTKEPIPVIPTVHYNMGGVPTNYKGQVldftpeggdkVIPGLYAAGECAAHSVHGANRLGANSLLDL 435
Cdd:PRK07804 330 TITASCRA-AGIDPVRQPIPVAPAAHYSCGGVVTDVYGRT----------SVPGLYAAGEVACTGVHGANRLASNSLLEG 398
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 436 VIFGRSCAlTILNENKPGDSIPELPVNCEEKScdnlnGLLHSkgdissiELRQKMQMTMQKHAAVFRRGDLLKEGVDkms 515
Cdd:PRK07804 399 LVVGERAG-AAAAAHAAAAGRPRATPAVGPEP-----GLLPA-------LDRAELQRAMTRGAGVLRSAAGLARAAD--- 462
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 516 siykeqqnlkACADSGKVWNSELVETLELQNLLINANQTIVAAENRTESRGAHARDDFQERideydysnplegqqkkpfD 595
Cdd:PRK07804 463 ----------RLAAGAPARVVPGRADWEDTNLTLVARALVAAALARTESRGCHWREDFPDT------------------D 514
|
570
....*....|..
gi 17505833 596 QHWRKHSIIGID 607
Cdd:PRK07804 515 DEWARSIVVRLA 526
|
|
| PRK06175 |
PRK06175 |
L-aspartate oxidase; Provisional |
59-472 |
2.81e-68 |
|
L-aspartate oxidase; Provisional
Pssm-ID: 180442 [Multi-domain] Cd Length: 433 Bit Score: 228.80 E-value: 2.81e-68
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 59 MKTAVITKLFPTRSHTVAAQGGVNAALgnmNPDNWRWHFYDTVKGSDWLGDQDAIHYMTREAERAIIELENYGMPFSRTT 138
Cdd:PRK06175 27 LKILMVSKGKLNECNTYLAQGGISVAR---NKDDITSFVEDTLKAGQYENNLEAVKILANESIENINKLIDMGLNFDKDE 103
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 139 DGKIYQRAfGGQSndfgrggqAHRTCCVADRTGHSLLHTLYGASLQYDCNYFVE--YFaLDLIMDKGKCIGVVAldIETG 216
Cdd:PRK06175 104 KELSYTKE-GAHS--------VNRIVHFKDNTGKKVEKILLKKVKKRKNITIIEncYL-VDIIENDNTCIGAIC--LKDN 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 217 QIHRFRAKNTVLATGGYGRAYFSCTSAHTCTGDGTALTARAGIRNSDMEFVQFHPTGIYGVGC-----LITEGSRGEGGY 291
Cdd:PRK06175 172 KQINIYSKVTILATGGIGGLFKNSTNQRIITGDGIAIAIRNNIKIKDLDYIQIHPTAFYEETIegkkfLISESVRGEGGK 251
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 292 LVNSQGERFMeryapnaKDLASRDVVSRAMTMEINEgrgvgPNKDHIYLQLHHLPAEQLQQRLPGISETAqIFAGVDVTK 371
Cdd:PRK06175 252 LLNSKGERFV-------DELLPRDVVTKAILEEMKK-----TGSNYVYLDITFLDKDFLKNRFPTIYEEC-LKRGIDITK 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 372 EPIPVIPTVHYNMGGVPTNYKGQVldftpeggdkVIPGLYAAGECAAHSVHGANRLGANSLLDLVIFGRSCALTIlNENK 451
Cdd:PRK06175 319 DAIPVSPAQHYFMGGIKVDLNSKT----------SMKNLYAFGEVSCTGVHGANRLASNSLLEGLVFSKRGAEKI-NSEI 387
|
410 420
....*....|....*....|.
gi 17505833 452 PGDSIPELPVNCEEKSCDNLN 472
Cdd:PRK06175 388 DNIKLNITKVYTLKHDVEYYS 408
|
|
| PRK08401 |
PRK08401 |
L-aspartate oxidase; Provisional |
54-573 |
3.66e-57 |
|
L-aspartate oxidase; Provisional
Pssm-ID: 236259 [Multi-domain] Cd Length: 466 Bit Score: 200.03 E-value: 3.66e-57
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 54 LSEGGMKTAVITKLfPTRSHTVAAQGGVnaALGNMNPDNWRWHFYDTVKGSDWLGDQDAIHYMTREAERAIIELENYGMP 133
Cdd:PRK08401 20 LAKKGFDVTIIGPG-IKKSNSYLAQAGI--AFPILEGDSIRAHVLDTIRAGKYINDEEVVWNVISKSSEAYDFLTSLGLE 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 134 FsrttdgkiyqrafggQSNDFGRGGQAHRTCCVADRTGHSLLHTLYGASLQYDCNyFVEYFALDLIMDKGKCIGVVAldi 213
Cdd:PRK08401 97 F---------------EGNELEGGHSFPRVFTIKNETGKHIIKILYKHARELGVN-FIRGFAEELAIKNGKAYGVFL--- 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 214 eTGQIHRFRAknTVLATGGYGRAYFSCTSAHTCTGDGTALTARAGIRNSDMEFVQFHPTGIYGVGC--LITEGSRGEGGY 291
Cdd:PRK08401 158 -DGELLKFDA--TVIATGGFSGLFKFTAGSPLNLGTLIGDAVMKGAPARDLEFVQFHPTGFIGKRGtyLISEAVRGAGAK 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 292 LVNSQGERFMeryapnaKDLASRDVVSRAMTMEINEGRGVGPNKDHIylqlhhlpaEQLQQRLPgisetaQIFA-----G 366
Cdd:PRK08401 235 LVTGDGERFV-------NELETRDIVARAIYRKMQEGKGVFLDATGI---------EDFKRRFP------QIYAflrkeG 292
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 367 VDVTKEPIPVIPTVHYNMGG--VPTNYKgqvldfTPeggdkvIPGLYAAGECAAHSVHGANRLGANSLLDLVIFGRSCAL 444
Cdd:PRK08401 293 IDPSRDLIPVTPIAHYTIGGisVDTFYR------TG------IKNLYAIGEAASNGFHGANRLASNSLLECIVSGLEVAR 360
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 445 TILNENKPGDSIPELPVNCEEkscdnlngllhsKGDISSIelrqkmQMTMQKHAAVFRRGDLLKEGVDKMSSIYKEQQnl 524
Cdd:PRK08401 361 TISRERPKLREVKEPPYHGYE------------LGDVDSI------REILWNHAGIVRSEESLREGLKKLEGIEADPR-- 420
|
490 500 510 520
....*....|....*....|....*....|....*....|....*....
gi 17505833 525 kacadsgkvwnselvetlelqnLLINANQTIVAAENRTESRGAHARDDF 573
Cdd:PRK08401 421 ----------------------LKLLAKGVLECALAREESRGAHYREDF 447
|
|
| Succ_DH_flav_C |
pfam02910 |
Fumarate reductase flavoprotein C-term; This family contains fumarate reductases, succinate ... |
487-640 |
9.74e-57 |
|
Fumarate reductase flavoprotein C-term; This family contains fumarate reductases, succinate dehydrogenases and L-aspartate oxidases.
Pssm-ID: 460743 [Multi-domain] Cd Length: 129 Bit Score: 187.65 E-value: 9.74e-57
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 487 RQKMQMTMQKHAAVFRRGDLLKEGVDKMSSIYKEQQNLKaCADSGKVWNSELVETLELQNLLINANQTIVAAENRTESRG 566
Cdd:pfam02910 1 RRELQKTMQDNVGVFRTEEGLKEALEKIQELRERYKNVR-VTDKSKVFNTELIEALELANLLELAEATARSALARKESRG 79
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 17505833 567 AHARDDFQERIDEydysnplegqqkkpfdqHWRKHSIIGIDTKTGAVDLTYRPVIDKTLdksetdwVPPKVRSY 640
Cdd:pfam02910 80 AHAREDYPERDDE-----------------NWLKHTLAYYDGDDGGPRLEYEPVTFTTL-------FPPKERSY 129
|
|
| sdhA |
PRK07573 |
fumarate reductase/succinate dehydrogenase flavoprotein subunit; |
69-579 |
5.32e-55 |
|
fumarate reductase/succinate dehydrogenase flavoprotein subunit;
Pssm-ID: 236054 [Multi-domain] Cd Length: 640 Bit Score: 198.12 E-value: 5.32e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 69 PTRSHTVAAQGGVNAALGNMNpDN---WRwHFYDTVKGSDwlgdqdaihYMTREAE--------RAIIELEN-YGMPFSR 136
Cdd:PRK07573 70 PRRAHSIAAQGGINAAKNYQN-DGdsvYR-LFYDTVKGGD---------FRAREANvyrlaevsVNIIDQCVaQGVPFAR 138
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 137 TTDGKIYQRAFGGqsndfgrgGQAHRTCCVADRTGHSLLHTLYGA-SLQYDCNYfVEYFA----LDLIMDKGKCIGVVAL 211
Cdd:PRK07573 139 EYGGLLANRSFGG--------AQVSRTFYARGQTGQQLLLGAYQAlSRQIAAGT-VKMYTrtemLDLVVVDGRARGIVAR 209
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 212 DIETGQIHRFRAKNTVLATGGYGRAYFSCTSAHTCtgDGTAlTARAGIRNSDME---FVQFHPTGIYGVG------CLIT 282
Cdd:PRK07573 210 NLVTGEIERHTADAVVLATGGYGNVFYLSTNAMGS--NATA-IWRAHKKGAYFAnpcFTQIHPTCIPVSGdyqsklTLMS 286
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 283 EGSRGEGGYLVNSQ------------GER--FMERYAPNAKDLASRDVVSRAMTMEINEGRGVGPNKDHIYLQL----HH 344
Cdd:PRK07573 287 ESLRNDGRIWVPKKkgdkrkpndipeEERdyYLERRYPAFGNLVPRDVASRAAKERCDAGRGVGPTGLGVYLDFadaiKR 366
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 345 LPAEQLQQRLPGISETAQIFAGVDVTKEPIPVIPTVHYNMGGVPTNYKGQvldftpeggdKVIPGLYAAGEcAAHSVHGA 424
Cdd:PRK07573 367 LGKDVIRERYGNLFDMYERITGENPYETPMRIYPAVHYTMGGLWVDYNLM----------STIPGLFVIGE-ANFSDHGA 435
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 425 NRLGANSLLdlvifgRSCA-------LTILN----ENKPGDSIPELP--VNCEEKSCDNLNGLLHSKGDISSIELRQKMQ 491
Cdd:PRK07573 436 NRLGASALM------QGLAdgyfvlpYTIGNyladTIGTPKVSTDHPefKEAEAEVQDRIDRLLNIKGKRTVDSFHRELG 509
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 492 MTMQKHAAVFRRGDLLKEGVDKMSSIYKE-QQNLKAcADSGKVWNSEL------VETLELQNLLinanqtIVAAENRTES 564
Cdd:PRK07573 510 KIMWDYCGMARNEEGLKKALEKIRALREEfWKNVRV-PGSADELNQELekagrvADFLELGELM------CRDALHREES 582
|
570 580
....*....|....*....|.
gi 17505833 565 RGAHARDDFQ------ERIDE 579
Cdd:PRK07573 583 CGGHFREEHQtedgeaLRDDE 603
|
|
| flavo_cyto_c |
TIGR01813 |
flavocytochrome c; This model describes a family of redox proteins related to the succinate ... |
77-440 |
4.72e-41 |
|
flavocytochrome c; This model describes a family of redox proteins related to the succinate dehydrogenases and fumarate reductases of E. coli, mitochondria, and other well-characterized systems. A member of this family from Shewanella frigidimarina NCIMB400 is characterized as a water-soluble periplasmic protein with four heme groups, a non-covalently bound FAD, and essentially unidirectional fumarate reductase activity. At least seven distinct members of this family are found in Shewanella oneidensis, a species able to use a wide variety of pathways for respiraton. [Energy metabolism, Electron transport]
Pssm-ID: 273816 [Multi-domain] Cd Length: 439 Bit Score: 155.19 E-value: 4.72e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 77 AQGGVNAALGNMN-----PDNWRWHFYDTVKGSDWLGDQDAIHYMTREAERAIiELENYGMPFsrtTDGKIYQraFGGQS 151
Cdd:TIGR01813 42 AAGGMNAAGTDQQkalgiEDSPELFIKDTLKGGRGINDPELVRILAEESKDAV-DWLQDGVGA---RLDDLIQ--LGGHS 115
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 152 NDfgrggQAHRTCCVAdRTGHSLLHTLYGASLQYDCNYFVEYFALDLIMD-KGKCIGVVALDiETGQIHRFRAKNTVLAT 230
Cdd:TIGR01813 116 VP-----RAHRPTGGA-ASGAEIVQTLYKKAKKEGIDTRLNSKVEDLIQDdQGSVVGVVVKG-KGKGIYIKAAKAVVLAT 188
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 231 GGYGR------AY------FSCTSAHTCTGDGTALTARAGIRNSDMEFVQFHPTG-IYGVGCLITEGSRGEGGYLVNSQG 297
Cdd:TIGR01813 189 GGFGSnkemiaKYdptlkhLGSTNQPGATGDGLLMAEKIGAALVDMDYIQAHPTAsPDEGGFLISEAVRGYGAILVNKTG 268
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 298 ERFMEryapnakDLASRDVVSramtMEINEGRGVGP---NKDHIYLQLH------------------------HLPAEQL 350
Cdd:TIGR01813 269 ERFMN-------ELATRDKVS----DAILAQPGKDAyliFDDDVYKKAKmvdnyyrlgvaykgdsleelakqfGIPAAAL 337
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 351 QQRLPGISETAQ----------IFAGVDVTKEPIPVI---PTVHYNMGGVPTNYKGQVLDftpEGGdKVIPGLYAAGEcA 417
Cdd:TIGR01813 338 KQTIKDYNGYVAsgkdtpfgrpMDMPTDLSKAPYYAIkvtPGVHHTMGGVKINTKAEVLD---ANG-KPIPGLFAAGE-V 412
|
410 420
....*....|....*....|...
gi 17505833 418 AHSVHGANRLGANSLLDLVIFGR 440
Cdd:TIGR01813 413 TGGVHGANRLGGNAIADCIVFGR 435
|
|
| PRK06481 |
PRK06481 |
flavocytochrome c; |
56-440 |
4.55e-32 |
|
flavocytochrome c;
Pssm-ID: 180584 [Multi-domain] Cd Length: 506 Bit Score: 130.34 E-value: 4.55e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 56 EGGMKTAVITKLFPTRSHTVAAQGGVNA------ALGNMNPDNWRwhFYD-TVKGSDWLGDQDAIHYMTREAERAIIELE 128
Cdd:PRK06481 82 DAGMNPVILEKMPVAGGNTMKASSGMNAsetkfqKAQGIADSNDK--FYEeTLKGGGGTNDKALLRYFVDNSASAIDWLD 159
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 129 NYGMPFSRTTdgkiyqrAFGGQSNDfgrggQAHRTccvADRT--GHSLLHTLYGASLQYDCNYFVEYFALDLIMDKGKCI 206
Cdd:PRK06481 160 SMGIKLDNLT-------ITGGMSEK-----RTHRP---HDGSavGGYLVDGLLKNVQERKIPLFVNADVTKITEKDGKVT 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 207 GVvALDIETGQIHRFRAKNTVLATGGYGR------------AYFSCTSAHTCTGDGTALTARAGIRNSDMEFVQFHPTGI 274
Cdd:PRK06481 225 GV-KVKINGKETKTISSKAVVVTTGGFGAnkdmiakyrpdlKGYVTTNQEGSTGDGIKMIEKLGGTTVDMDQIQIHPTVQ 303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 275 YGVGCLITEGSRGEGGYLVNSQGERFM-----------------ERYAPNAKDLASRDVVSrAMTMEINEGRGV-GPNKD 336
Cdd:PRK06481 304 QSKSYLIGEAVRGEGAILVNQKGKRFGneldtrdkvsaainklpEKYAYVVFDSGVKDRVK-AIAQYEEKGFVEeGKTID 382
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 337 HIYLQLhHLPAEQLQQRLPGISETA-----QIF---AGVD--VTKEP---IPVIPTVHYNMGGVPTNYKGQVLDftpEGG 403
Cdd:PRK06481 383 ELAKKI-NVPAETLTKTLDTWNKAVknkkdEAFgrtTGMDndLSTGPyyaIKIAPGIHYTMGGVKINTNTEVLK---KDG 458
|
410 420 430
....*....|....*....|....*....|....*..
gi 17505833 404 dKVIPGLYAAGECAAhSVHGANRLGANSLLDLVIFGR 440
Cdd:PRK06481 459 -SPITGLYAAGEVTG-GLHGENRIGGNSVADIIIFGR 493
|
|
| PTZ00306 |
PTZ00306 |
NADH-dependent fumarate reductase; Provisional |
216-455 |
2.16e-21 |
|
NADH-dependent fumarate reductase; Provisional
Pssm-ID: 140327 [Multi-domain] Cd Length: 1167 Bit Score: 99.47 E-value: 2.16e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 216 GQIHRFRAKNTVLATGGYG---------RAY------FSCTSAHTCTGDGTALTARAGIRNSDMEFVQFHPTGIYG---- 276
Cdd:PTZ00306 602 GQVMDLLADAVILATGGFSndhtpnsllREYapqlsgFPTTNGPWATGDGVKLARKLGATLVDMDKVQLHPTGLIDpkdp 681
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 277 ---VGCLITEGSRGEGGYLVNSQGERFMeryapNAKDLasRDVVSRAMTMEINEGRGVGP--------NKDHIYL----- 340
Cdd:PTZ00306 682 snrTKYLGPEALRGSGGVLLNKNGERFV-----NELDL--RSVVSQAIIAQGNEYPGSGGskfaycvlNEAAAKLfgkns 754
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 341 ---------------------QLHHLPAEQLQQRLPGISETAQ-----------IFAGVDVTKEPIPV---IPTVHYNMG 385
Cdd:PTZ00306 755 lgfywkrlglfqrvddvkglaKLIGCPVENLHRTLETYERLSTkkvacpltgkvVFPCVVGTQGPYYVafvTPSIHYTMG 834
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 17505833 386 GVPTNYKGQVL----DFTPEGGDKVIPGLYAAGECAAhSVHGANRLGANSLLDLVIFGRSC---ALTILNENKPGDS 455
Cdd:PTZ00306 835 GCLISPSAEMQmednSVNIFEDRRPILGLFGAGEVTG-GVHGGNRLGGNSLLECVVFGKIAgdrAATILQKKKYGLS 910
|
|
| PRK06854 |
PRK06854 |
adenylyl-sulfate reductase subunit alpha; |
71-622 |
2.74e-16 |
|
adenylyl-sulfate reductase subunit alpha;
Pssm-ID: 235879 [Multi-domain] Cd Length: 608 Bit Score: 82.28 E-value: 2.74e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 71 RSHTVAAqgGVNAA---LG-NMNPDNwrwhFYDTVKGsDWLG--DQDAIHYMTREAERAIIELENYGMPFSRTTDGKiYQ 144
Cdd:PRK06854 49 RSGAVAQ--GLSAInayIGeGETPED----YVRYVRK-DLMGivREDLVYDIARHVDSVVHLFEEWGLPIWKDENGK-YV 120
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 145 RafggqsndfgRG-------GQAHRtCCVADrtghsllhtlyGASLQYDCNYFVEYFALDLIMDKGKCIGVVALDIETGQ 217
Cdd:PRK06854 121 R----------RGrwqiminGESYK-PIVAE-----------AAKKALGDNVLNRVFITDLLVDDNRIAGAVGFSVRENK 178
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 218 IHRFRAKNTVLATGG----Y---------GRAYFSCTSahtcTGDGTALTARAGIRNSDME--FVQFH------PTGIY- 275
Cdd:PRK06854 179 FYVFKAKAVIVATGGaagiYrprspgegrGRMWYPPFN----TGSGYAMGIRAGAEMTTFEnrFIPLRfkdgygPVGAWf 254
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 276 -GVGClitegsrgeggYLVNSQGERFMERYAPNAKDLASRDVVSR--------AMTMEINEGRgvGPnkdhIYLQLHH-L 345
Cdd:PRK06854 255 lLFKA-----------KAVNALGEEYEAKNAAELKKYVPYADYKPiptclrnyATVEENKAGR--GP----IYMDTEEaL 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 346 PAEQLQQRL--------PGIsetAQIFAGVDV--TKEPIPVIPTVHYNMGGvptnYKGQ-------VLDFTPEGGDKV-- 406
Cdd:PRK06854 318 QDKHLESELwedfldmtPGQ---ALLWAAQNIepEEENSEIMGTEPYIVGS----HSGAsgywvsgPEDWVPEEYKWGyn 390
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 407 ----IPGLYAAGECAAHSVH----GA---NRLGANSlldlvifgrscALTILNENKPG------DSIPEL------PVNC 463
Cdd:PRK06854 391 rmttVEGLFAAGDVVGGSPHkfssGSfaeGRIAAKA-----------AVRYILDNKDEkpeiddDQIEELkkeiyaPLER 459
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 464 EEKSCDNLNGLLHSKGDISSIELRQKMQMTMQKHAAVFRR-----GDLLKEGVDKMSSIYKEQQNLKAcADSgkvwnSEL 538
Cdd:PRK06854 460 YEEFKDYSTDPDVNPNYISPEQLEERLQKIMDEYAGGISTnyttnEKLLEIALELLEMLEEDSEKLAA-RDL-----HEL 533
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 539 VETLELQNLLINANQTIVAAENRTESR--GaharddFQERIDeYDYSNplegqqkkpfDQHWRKHSIIGIDTKTGAVDLT 616
Cdd:PRK06854 534 MRCWELKHRLLVAEAHIRHLLFRKETRwpG------YYERAD-YPGKD----------DENWKCFVNSRYDPGTGEWTIR 596
|
....*.
gi 17505833 617 YRPVID 622
Cdd:PRK06854 597 KLPYYQ 602
|
|
| PRK08275 |
PRK08275 |
putative oxidoreductase; Provisional |
203-418 |
5.12e-13 |
|
putative oxidoreductase; Provisional
Pssm-ID: 181346 [Multi-domain] Cd Length: 554 Bit Score: 72.01 E-value: 5.12e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 203 GKCIGVVALDIETGQIHRFRAKNTVLATGGYGR------AYFSCTSAH-TCTGDGTALTARAGIRNSDMEFVQFHP--TG 273
Cdd:PRK08275 169 GRVAGALGFDCRTGEFLVIRAKAVILCCGAAGRlglpasGYLFGTYENpTNAGDGYAMAYHAGAELANLECFQINPliKD 248
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 274 IYGVGCLITEGSRgeGGYLVNSQGERFMERYAPnakdlasrdvvSRAMTMEI-NE-GRGVGPnkdhIYLQLHHLPAEQlq 351
Cdd:PRK08275 249 YNGPACAYVTGPL--GGYTANAKGERFIECDYW-----------SGQMMWEFyQElQSGNGP----VFLKLDHLAEET-- 309
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 352 qrlpgISETAQIF--------------AGVDVTKEPIP-VIPTVHYNMG----GVptnykgqvldFTPEGGDKVIPGLYA 412
Cdd:PRK08275 310 -----IQTIETILhtnerpsrgrfhegRGTDYRQQMVEmHISEIGFCSGhsasGV----------WVNEKAETTVPGLYA 374
|
....*.
gi 17505833 413 AGECAA 418
Cdd:PRK08275 375 AGDMAS 380
|
|
| PRK13800 |
PRK13800 |
fumarate reductase/succinate dehydrogenase flavoprotein subunit; |
198-420 |
1.94e-11 |
|
fumarate reductase/succinate dehydrogenase flavoprotein subunit;
Pssm-ID: 237512 [Multi-domain] Cd Length: 897 Bit Score: 67.18 E-value: 1.94e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 198 LIMDKGKCIGVVALDIETGQIHRFRAKNTVLATGGYGR------AYFSCTSAH-TCTGDGTALTARAGIRNSDMEFVQFH 270
Cdd:PRK13800 169 VLTEGGRAVGAAALNTRTGEFVTVGAKAVILATGPCGRlglpasGYLYGTYENpTNAGDGYSMAYHAGAELSGIECFQIN 248
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 271 P--TGIYGVGCLITegSRGEGGYLVNSQGERFMEryapnakdlasRDVVSRAMTMEIneGRGVGPNKDHIYLQLHHLPAE 348
Cdd:PRK13800 249 PliKDYNGPACAYV--ANPFGGYQVNAQGERFVD-----------SDYWSGQMMAEV--KREIESARGPIYLKVSHLPEE 313
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 349 QLQQrLPGISETAQifagvdvtkepIPVIPTVHYNMGgvpTNYKGQVLD-----------------FTPEGGDKVIPGLY 411
Cdd:PRK13800 314 TLSA-LESILHTTE-----------RPTRGTFHANRG---HDYRTHDIEmhiseiglcsghsasgvWVDEHARTTVPGLY 378
|
250
....*....|.
gi 17505833 412 AAGE--CAAHS 420
Cdd:PRK13800 379 AAGDlaCVPHN 389
|
|
| PRK12844 |
PRK12844 |
3-ketosteroid-delta-1-dehydrogenase; Reviewed |
385-431 |
5.16e-04 |
|
3-ketosteroid-delta-1-dehydrogenase; Reviewed
Pssm-ID: 183787 [Multi-domain] Cd Length: 557 Bit Score: 43.20 E-value: 5.16e-04
10 20 30 40
....*....|....*....|....*....|....*....|....*..
gi 17505833 385 GGVPTNYKGQVLDftpeGGDKVIPGLYAAGECAAhSVHGANRLGANS 431
Cdd:PRK12844 489 GGLLTDEHARVLR----EDGSVIPGLYATGNCTA-SVMGRTYPGAGA 530
|
|
| COG3573 |
COG3573 |
Predicted oxidoreductase [General function prediction only]; |
384-427 |
5.49e-04 |
|
Predicted oxidoreductase [General function prediction only];
Pssm-ID: 442794 [Multi-domain] Cd Length: 551 Bit Score: 42.86 E-value: 5.49e-04
10 20 30 40
....*....|....*....|....*....|....*....|....*..
gi 17505833 384 MGGVPTNYKGQVLDftpeGGDKVIPGLYAAGECAAH---SVHGANRL 427
Cdd:COG3573 486 LGGLQTDLDSRVLD----ADGQPIPGLYAAGEAAGFgggGVHGYRAL 528
|
|
| PRK07843 |
PRK07843 |
3-oxosteroid 1-dehydrogenase; |
197-424 |
5.79e-04 |
|
3-oxosteroid 1-dehydrogenase;
Pssm-ID: 236111 [Multi-domain] Cd Length: 557 Bit Score: 43.10 E-value: 5.79e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 197 DLIMDKGKCIGVVALDIETGQIHRFRaKNTVLATGG----------YGRAYFSC---TSAHTCTGDGTALTARAGIRNSD 263
Cdd:PRK07843 233 DLYVEDGRVTGVHAAESGEPQLIRAR-RGVILASGGfehneqmrakYQRAPIGTewtVGAKANTGDGILAGEKLGAALDL 311
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 264 MEFVQFHPTgIYGVG----CLiTEGSRgEGGYLVNSQGERFMERYAPNAkdlasrDVVSRAMTMEINEGRGVGPNK---- 335
Cdd:PRK07843 312 MDDAWWGPT-IPLPGgpwfAL-SERNL-PGSIIVNMSGKRFMNESAPYV------EAVHHMYGGEYGQGPGPGENIpawl 382
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 336 --DHIYLQLHHLPAEQLQQRLPG---------------------------ISETAQIFAGV------------------- 367
Cdd:PRK07843 383 vfDQRYRDRYLFAGLQPRQPIPSrwlesgvivkadtlaelaakigvpadaLTATVQRFNGFarsgvdedfhrgesaydry 462
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 17505833 368 --DVTKEPIPVI------PTVHYNM--------GGVPTNYKGQVLdfTPEGgdKVIPGLYAAGECAA----HSVHGA 424
Cdd:PRK07843 463 ygDPTNKPNPNLgelshaPFYAAKMvpgdlgtkGGLRTDVRGRVL--RDDG--SVIEGLYAAGNVSApvmgHTYAGP 535
|
|
| PRK12834 |
PRK12834 |
putative FAD-binding dehydrogenase; Reviewed |
384-427 |
9.90e-04 |
|
putative FAD-binding dehydrogenase; Reviewed
Pssm-ID: 183782 [Multi-domain] Cd Length: 549 Bit Score: 42.19 E-value: 9.90e-04
10 20 30 40
....*....|....*....|....*....|....*....|....*..
gi 17505833 384 MGGVPTNYKGQVLDftPEGgdKVIPGLYAAGECAAH---SVHGANRL 427
Cdd:PRK12834 485 LGGLETDLDSRVLG--ADG--TPLPGLYAAGEAAGFgggGVHGYNAL 527
|
|
| PRK07121 |
PRK07121 |
FAD-binding protein; |
364-440 |
3.30e-03 |
|
FAD-binding protein;
Pssm-ID: 180854 [Multi-domain] Cd Length: 492 Bit Score: 40.26 E-value: 3.30e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17505833 364 FAGVDVTkepIPVIPTVHYNMGGVPTNYK-GQVLDftpEGGdKVIPGLYAAGECAAhsvhganRLGAN------SLLDLV 436
Cdd:PRK07121 412 FAAIDLS---LGKAPTPGFTLGGLRVDEDtGEVLR---ADG-APIPGLYAAGRCAS-------GIASNgyvsglSLADCS 477
|
....
gi 17505833 437 IFGR 440
Cdd:PRK07121 478 FFGR 481
|
|
| |
