NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|17136912|ref|NP_476985|]
View 

oxen [Drosophila melanogaster]

Protein Classification

cytochrome b-c1 complex subunit 9( domain architecture ID 10526607)

cytochrome b-c1 complex subunit 9 is a component of the ubiquinol-cytochrome c oxidoreductase, a multisubunit transmembrane complex that is part of the mitochondrial electron transport chain which drives oxidative phosphorylation

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
UCR_UQCRX_QCR9 pfam05365
Ubiquinol-cytochrome C reductase, UQCRX/QCR9 like; The UQCRX/QCR9 protein is the 9/10 subunit ...
 5-54 1.25e-20

Ubiquinol-cytochrome C reductase, UQCRX/QCR9 like; The UQCRX/QCR9 protein is the 9/10 subunit of complex III, encoding a protein of about 7-kDa. Deletion of QCR9 results in the inability of cells to grow on grow on-fermentable carbon source n yeast.


:

Pssm-ID: 461632  Cd Length: 50  Bit Score: 75.29  E-value: 1.25e-20
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|
gi 17136912    5 YNTLFKRTSTYAVAIIASAFFFERALDVTSVAIFEGINKGKLWKDIKGKY 54
Cdd:pfam05365  1 YNTLFRRNSTFVGTIFAGAFVFERAFDSATDKIWDSINKGKLWKDIKHKY 50
 
Name Accession Description Interval E-value
UCR_UQCRX_QCR9 pfam05365
Ubiquinol-cytochrome C reductase, UQCRX/QCR9 like; The UQCRX/QCR9 protein is the 9/10 subunit ...
 5-54 1.25e-20

Ubiquinol-cytochrome C reductase, UQCRX/QCR9 like; The UQCRX/QCR9 protein is the 9/10 subunit of complex III, encoding a protein of about 7-kDa. Deletion of QCR9 results in the inability of cells to grow on grow on-fermentable carbon source n yeast.


Pssm-ID: 461632  Cd Length: 50  Bit Score: 75.29  E-value: 1.25e-20
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|
gi 17136912    5 YNTLFKRTSTYAVAIIASAFFFERALDVTSVAIFEGINKGKLWKDIKGKY 54
Cdd:pfam05365  1 YNTLFRRNSTFVGTIFAGAFVFERAFDSATDKIWDSINKGKLWKDIKHKY 50
 
Name Accession Description Interval E-value
UCR_UQCRX_QCR9 pfam05365
Ubiquinol-cytochrome C reductase, UQCRX/QCR9 like; The UQCRX/QCR9 protein is the 9/10 subunit ...
 5-54 1.25e-20

Ubiquinol-cytochrome C reductase, UQCRX/QCR9 like; The UQCRX/QCR9 protein is the 9/10 subunit of complex III, encoding a protein of about 7-kDa. Deletion of QCR9 results in the inability of cells to grow on grow on-fermentable carbon source n yeast.


Pssm-ID: 461632  Cd Length: 50  Bit Score: 75.29  E-value: 1.25e-20
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|
gi 17136912    5 YNTLFKRTSTYAVAIIASAFFFERALDVTSVAIFEGINKGKLWKDIKGKY 54
Cdd:pfam05365  1 YNTLFRRNSTFVGTIFAGAFVFERAFDSATDKIWDSINKGKLWKDIKHKY 50
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH