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Conserved domains on  [gi|16131145|ref|NP_417723|]
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DUF997 domain-containing protein YhdT [Escherichia coli str. K-12 substr. MG1655]

Protein Classification

YhdT family protein( domain architecture ID 10013587)

YhdT family protein is a DUF997 domain-containing protein, similar to Escherichia coli membrane protein YhdT

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PRK10633 PRK10633
hypothetical protein; Provisional
 1-80 2.97e-48

hypothetical protein; Provisional


:

Pssm-ID: 182602  Cd Length: 80  Bit Score: 147.15  E-value: 2.97e-48
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131145   1 MDTRFVQAHKEARWALGLTLLYLAVWLVAAYLSGVAPGFTGFPRWFEMACILTPLLFIGLCWAMVKFIYRDIPLEDDDAA 80
Cdd:PRK10633  1 MDTRFVQAHKEARWALGLTLLYLAAWLVAAYLPGNAPGFTGLPHWFEMACLLLPLLFILLCWLMVKFIFRDIPLEDDDAA 80
 
Name Accession Description Interval E-value
PRK10633 PRK10633
hypothetical protein; Provisional
 1-80 2.97e-48

hypothetical protein; Provisional


Pssm-ID: 182602  Cd Length: 80  Bit Score: 147.15  E-value: 2.97e-48
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131145   1 MDTRFVQAHKEARWALGLTLLYLAVWLVAAYLSGVAPGFTGFPRWFEMACILTPLLFIGLCWAMVKFIYRDIPLEDDDAA 80
Cdd:PRK10633  1 MDTRFVQAHKEARWALGLTLLYLAAWLVAAYLPGNAPGFTGLPHWFEMACLLLPLLFILLCWLMVKFIFRDIPLEDDDAA 80
YhdT COG3924
Uncharacterized membrane protein YhdT [Function unknown];
1-79 6.44e-39

Uncharacterized membrane protein YhdT [Function unknown];


Pssm-ID: 443128  Cd Length: 82  Bit Score: 123.42  E-value: 6.44e-39
                       10        20        30        40        50        60        70
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 16131145  1 MDTRFVQAHKEARWALGLTLLYLAVWLVAAYLSGVAPGFTGFPRWFEMACILTPLLFIGLCWAMVKFIYRDIPLEDDDA 79
Cdd:COG3924  2 MDKRFKQANKEALWALGLTLLYFIWWYLFAYGLGSGTGIFGLPLWFELSCILGPLLFIVLCWLMVKFIFKDIPLEDEDE 80
DUF997 pfam06196
Protein of unknown function (DUF997); Family of predicted bacterial membrane protein with ...
 7-78 5.12e-28

Protein of unknown function (DUF997); Family of predicted bacterial membrane protein with unknown function.


Pssm-ID: 428817  Cd Length: 77  Bit Score: 95.75  E-value: 5.12e-28
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 16131145    7 QAHKEARWALGLTLLYLAVWLVAAYLSGVAP-----GFTGFPRWFEMACILTPLLFIGLCWAMVKFIYRDIPLEDDD 78
Cdd:pfam06196  1 QANKEALWTLGLYLLYFAWWYLFAYGLGSGPveeytYILGFPLWFFYSCIGGPILFVILVWLLVKFVFKDIPLEDEE 77
 
Name Accession Description Interval E-value
PRK10633 PRK10633
hypothetical protein; Provisional
 1-80 2.97e-48

hypothetical protein; Provisional


Pssm-ID: 182602  Cd Length: 80  Bit Score: 147.15  E-value: 2.97e-48
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131145   1 MDTRFVQAHKEARWALGLTLLYLAVWLVAAYLSGVAPGFTGFPRWFEMACILTPLLFIGLCWAMVKFIYRDIPLEDDDAA 80
Cdd:PRK10633  1 MDTRFVQAHKEARWALGLTLLYLAAWLVAAYLPGNAPGFTGLPHWFEMACLLLPLLFILLCWLMVKFIFRDIPLEDDDAA 80
YhdT COG3924
Uncharacterized membrane protein YhdT [Function unknown];
1-79 6.44e-39

Uncharacterized membrane protein YhdT [Function unknown];


Pssm-ID: 443128  Cd Length: 82  Bit Score: 123.42  E-value: 6.44e-39
                       10        20        30        40        50        60        70
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 16131145  1 MDTRFVQAHKEARWALGLTLLYLAVWLVAAYLSGVAPGFTGFPRWFEMACILTPLLFIGLCWAMVKFIYRDIPLEDDDA 79
Cdd:COG3924  2 MDKRFKQANKEALWALGLTLLYFIWWYLFAYGLGSGTGIFGLPLWFELSCILGPLLFIVLCWLMVKFIFKDIPLEDEDE 80
DUF997 pfam06196
Protein of unknown function (DUF997); Family of predicted bacterial membrane protein with ...
 7-78 5.12e-28

Protein of unknown function (DUF997); Family of predicted bacterial membrane protein with unknown function.


Pssm-ID: 428817  Cd Length: 77  Bit Score: 95.75  E-value: 5.12e-28
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 16131145    7 QAHKEARWALGLTLLYLAVWLVAAYLSGVAP-----GFTGFPRWFEMACILTPLLFIGLCWAMVKFIYRDIPLEDDD 78
Cdd:pfam06196  1 QANKEALWTLGLYLLYFAWWYLFAYGLGSGPveeytYILGFPLWFFYSCIGGPILFVILVWLLVKFVFKDIPLEDEE 77
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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