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Conserved domains on  [gi|16130048|ref|NP_416613|]
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putative fimbrial chaperone YehC [Escherichia coli str. K-12 substr. MG1655]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PRK15253 super family cl33116
putative fimbrial assembly chaperone protein StcB; Provisional
 12-239 1.30e-120

putative fimbrial assembly chaperone protein StcB; Provisional


The actual alignment was detected with superfamily member PRK15253:

Pssm-ID: 185165 [Multi-domain]  Cd Length: 242  Bit Score: 343.19  E-value: 1.30e-120
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130048   12 RGIKMKGLLSLLIFSMVLPAHAGIVIYGTRIIYPAENKEVMVQLMNQGNRSSLLQAWIDDGDTSLPPEKIQVPFMLTPPV 91
Cdd:PRK15253  12 GRVNMKILSAVLLSAIILPAHAGIVIYGTRVIYPAEKKEVVVQLVNQGEQASLVQSWIDDGNTSLPPEKIQVPFMLTPPV 91

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130048   92 AKIGANSGQQVKIKIMPNKLPTNKESIFYLNVLDIPPNSPEQEGKNALKFAMQNRIKLFYRPAGIAPVNKATFKKLLVNR 171
Cdd:PRK15253  92 ARVAAESGQQIKIKKMPNSLPDNKESLFYLNVLDIPPNSQENAGKNVLKFAMQNRIKLIWRPSRIAAVTKDSFQRIGLFR 171

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 16130048  172 SGNGLVIKNDSANWVTISDVKANNVKVNYETIMIAPLESQSVNVKSNNANNWHLTIIDDHGNYISDKI 239
Cdd:PRK15253 172 SNKTVIMKNDTANWITVTDVKAGNTKINDQTIMLPPLSTQNINMKYASTSQYEVTIIDDNGNYISSKI 239
 
Name Accession Description Interval E-value
PRK15253 PRK15253
putative fimbrial assembly chaperone protein StcB; Provisional
 12-239 1.30e-120

putative fimbrial assembly chaperone protein StcB; Provisional


Pssm-ID: 185165 [Multi-domain]  Cd Length: 242  Bit Score: 343.19  E-value: 1.30e-120
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130048   12 RGIKMKGLLSLLIFSMVLPAHAGIVIYGTRIIYPAENKEVMVQLMNQGNRSSLLQAWIDDGDTSLPPEKIQVPFMLTPPV 91
Cdd:PRK15253  12 GRVNMKILSAVLLSAIILPAHAGIVIYGTRVIYPAEKKEVVVQLVNQGEQASLVQSWIDDGNTSLPPEKIQVPFMLTPPV 91

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130048   92 AKIGANSGQQVKIKIMPNKLPTNKESIFYLNVLDIPPNSPEQEGKNALKFAMQNRIKLFYRPAGIAPVNKATFKKLLVNR 171
Cdd:PRK15253  92 ARVAAESGQQIKIKKMPNSLPDNKESLFYLNVLDIPPNSQENAGKNVLKFAMQNRIKLIWRPSRIAAVTKDSFQRIGLFR 171

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 16130048  172 SGNGLVIKNDSANWVTISDVKANNVKVNYETIMIAPLESQSVNVKSNNANNWHLTIIDDHGNYISDKI 239
Cdd:PRK15253 172 SNKTVIMKNDTANWITVTDVKAGNTKINDQTIMLPPLSTQNINMKYASTSQYEVTIIDDNGNYISSKI 239
FimC COG3121
P pilus assembly protein, chaperone PapD [Extracellular structures];
19-236 8.66e-77

P pilus assembly protein, chaperone PapD [Extracellular structures];


Pssm-ID: 442355 [Multi-domain]  Cd Length: 237  Bit Score: 231.80  E-value: 8.66e-77
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130048  19 LLSLLIFSMVLPAHAGIVIYGTRIIYPAENKEVMVQLMNQGNRSSLLQAWIDDGDTSLPPEKIQVPFMLTPPVAKIGANS 98
Cdd:COG3121   9 LLALLLLLASAAAAAGISISPTRVIYPAGDKEASLTLTNTGDTPYLVQSWVDDWDQDAGPDKATAPFVVTPPLFRLEPGK 88

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130048  99 GQQVKIKIMPNKLPTNKESIFYLNVLDIPPNSPEQEGKNALKFAMQNRIKLFYRPAGIAPVNKATFKKLLVNRSGNGLVI 178
Cdd:COG3121  89 SQTVRIIRTGPPLPQDRESLFRLNVDEIPPKDASEEGKNTLQIALRTRIKLFYRPAGLKGSPEDAAEKLTWSLVGNGLTV 168

                       170       180       190       200       210       220
                ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 16130048 179 KNDSANWVTISDVK--ANNVKVNYETIMIAPLESQSVNVKSNNA----NNWHLTIIDDHGNYIS 236
Cdd:COG3121 169 TNPGPYYVTLSDLSlgAGGKKLKKGLGMVLPGSTRRWPLPAGASlaagGKVTWATINDYGGAVP 232
PapD_N pfam00345
Pili and flagellar-assembly chaperone, PapD N-terminal domain; C2 domain-like beta-sandwich ...
 35-157 9.69e-53

Pili and flagellar-assembly chaperone, PapD N-terminal domain; C2 domain-like beta-sandwich fold. This domain is the n-terminal part of the PapD chaperone protein for pilus and flagellar assembly.


Pssm-ID: 425623  Cd Length: 123  Bit Score: 166.61  E-value: 9.69e-53
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130048    35 IVIYGTRIIYPAENKEVMVQLMNQGNRSSLLQAWIDDGDTSLPPEKIQVPFMLTPPVAKIGANSGQQVKIKIMPNKLPTN 114
Cdd:pfam00345   1 VVLGGTRVIYPAGEKEASVTVSNTGDNPYLVQSWVDDGNEEGTDEKAKAPFIVTPPLFRLEPGQEQVLRIYTTGPPLPTD 80

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|...
gi 16130048   115 KESIFYLNVLDIPPNSPEQEGKNALKFAMQNRIKLFYRPAGIA 157
Cdd:pfam00345  81 RESLFWLNVLEIPPKDKPKGGQNGLQLALRSRIKLFYRPAGLA 123
 
Name Accession Description Interval E-value
PRK15253 PRK15253
putative fimbrial assembly chaperone protein StcB; Provisional
 12-239 1.30e-120

putative fimbrial assembly chaperone protein StcB; Provisional


Pssm-ID: 185165 [Multi-domain]  Cd Length: 242  Bit Score: 343.19  E-value: 1.30e-120
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130048   12 RGIKMKGLLSLLIFSMVLPAHAGIVIYGTRIIYPAENKEVMVQLMNQGNRSSLLQAWIDDGDTSLPPEKIQVPFMLTPPV 91
Cdd:PRK15253  12 GRVNMKILSAVLLSAIILPAHAGIVIYGTRVIYPAEKKEVVVQLVNQGEQASLVQSWIDDGNTSLPPEKIQVPFMLTPPV 91

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130048   92 AKIGANSGQQVKIKIMPNKLPTNKESIFYLNVLDIPPNSPEQEGKNALKFAMQNRIKLFYRPAGIAPVNKATFKKLLVNR 171
Cdd:PRK15253  92 ARVAAESGQQIKIKKMPNSLPDNKESLFYLNVLDIPPNSQENAGKNVLKFAMQNRIKLIWRPSRIAAVTKDSFQRIGLFR 171

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 16130048  172 SGNGLVIKNDSANWVTISDVKANNVKVNYETIMIAPLESQSVNVKSNNANNWHLTIIDDHGNYISDKI 239
Cdd:PRK15253 172 SNKTVIMKNDTANWITVTDVKAGNTKINDQTIMLPPLSTQNINMKYASTSQYEVTIIDDNGNYISSKI 239
PRK15218 PRK15218
fimbrial assembly chaperone;
16-239 2.04e-105

fimbrial assembly chaperone;


Pssm-ID: 185140 [Multi-domain]  Cd Length: 226  Bit Score: 303.83  E-value: 2.04e-105
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130048   16 MKGLLSLLIFSMVLPAHAGIVIYGTRIIYPAENKEVMVQLMNQGNRSSLLQAWIDDGDTSLPPEKIQVPFMLTPPVAKIG 95
Cdd:PRK15218   1 MKWMIALCLACAAMPAWSGIYIYGTRIIYPAQKKDITVQLMNDGKRSSLIQAWIDNGDTSLPPEKLQVPFIMTPPVIRVA 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130048   96 ANSGQQVKIKIMPNKLPTNKESIFYLNVLDIPPNSPEQEGKNALKFAMQNRIKLFYRPAGIAPVNKATFKKLLVNRSGNG 175
Cdd:PRK15218  81 ANSGQQLKIKKLANNLPGDRESLFYLNVLDIPPNSDENKDKNIIKFALQNRIKLIYRPPGVQKVDKATFSRLQLLRAPGS 160

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 16130048  176 LVIKNDSANWVTISDVKANNvKVNYETIMIAPLESQSVNVkSNNANNWHLTIIDDHGNYISDKI 239
Cdd:PRK15218 161 ISVKNNSANWITIPEIKAKS-KVNKETLLLAPWSSQSITT-TVVVNSYTVTLIDDSGNYLNETV 222
FimC COG3121
P pilus assembly protein, chaperone PapD [Extracellular structures];
19-236 8.66e-77

P pilus assembly protein, chaperone PapD [Extracellular structures];


Pssm-ID: 442355 [Multi-domain]  Cd Length: 237  Bit Score: 231.80  E-value: 8.66e-77
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130048  19 LLSLLIFSMVLPAHAGIVIYGTRIIYPAENKEVMVQLMNQGNRSSLLQAWIDDGDTSLPPEKIQVPFMLTPPVAKIGANS 98
Cdd:COG3121   9 LLALLLLLASAAAAAGISISPTRVIYPAGDKEASLTLTNTGDTPYLVQSWVDDWDQDAGPDKATAPFVVTPPLFRLEPGK 88

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130048  99 GQQVKIKIMPNKLPTNKESIFYLNVLDIPPNSPEQEGKNALKFAMQNRIKLFYRPAGIAPVNKATFKKLLVNRSGNGLVI 178
Cdd:COG3121  89 SQTVRIIRTGPPLPQDRESLFRLNVDEIPPKDASEEGKNTLQIALRTRIKLFYRPAGLKGSPEDAAEKLTWSLVGNGLTV 168

                       170       180       190       200       210       220
                ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 16130048 179 KNDSANWVTISDVK--ANNVKVNYETIMIAPLESQSVNVKSNNA----NNWHLTIIDDHGNYIS 236
Cdd:COG3121 169 TNPGPYYVTLSDLSlgAGGKKLKKGLGMVLPGSTRRWPLPAGASlaagGKVTWATINDYGGAVP 232
PRK09926 PRK09926
fimbrial chaperone;
9-235 2.86e-56

fimbrial chaperone;


Pssm-ID: 236634 [Multi-domain]  Cd Length: 246  Bit Score: 179.53  E-value: 2.86e-56
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130048    9 FNLRGIKMKGLLSLLIFSMvlPAHAGIVIYGTRIIYPAENKEVMVQLMNQGNRSSLLQAWIDDGDTSLPPEKIQVPFMLT 88
Cdd:PRK09926   3 FNTKHTTALCFATCMAFSS--SSIADIVISGTRIIYKSDQKDVNVRLENKGNNPLLVQSWLDTGDDNAEPGSIKVPFTAT 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130048   89 PPVAKIGANSGQQVKIKIMPNK-LPTNKESIFYLNVLDIPP--NSPEQEGKNALKFAMQNRIKLFYRPAGI--APVNKAT 163
Cdd:PRK09926  81 PPVSRIDPKRGQTIKLMYTASTaLPKDRESVFWFNVLEVPPkpDAEKVANQSLLQLAFRTRIKLFYRPDGLkgNPSEAPL 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130048  164 FKKLLVNRSGN--GLVIKNDSANWVTISDV--KANNVKVNYETIMIAPLESQSVNVK--SNNANNW--HLTIIDDHGNYI 235
Cdd:PRK09926 161 ALKWSWAGSEGkaSLRVTNPTPYYVSFSSGdlEAGGKRYPVDSKMIAPFSDESMKVKglSGKASSGkvHFYAINDFGGAI 240
PapD_N pfam00345
Pili and flagellar-assembly chaperone, PapD N-terminal domain; C2 domain-like beta-sandwich ...
 35-157 9.69e-53

Pili and flagellar-assembly chaperone, PapD N-terminal domain; C2 domain-like beta-sandwich fold. This domain is the n-terminal part of the PapD chaperone protein for pilus and flagellar assembly.


Pssm-ID: 425623  Cd Length: 123  Bit Score: 166.61  E-value: 9.69e-53
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130048    35 IVIYGTRIIYPAENKEVMVQLMNQGNRSSLLQAWIDDGDTSLPPEKIQVPFMLTPPVAKIGANSGQQVKIKIMPNKLPTN 114
Cdd:pfam00345   1 VVLGGTRVIYPAGEKEASVTVSNTGDNPYLVQSWVDDGNEEGTDEKAKAPFIVTPPLFRLEPGQEQVLRIYTTGPPLPTD 80

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|...
gi 16130048   115 KESIFYLNVLDIPPNSPEQEGKNALKFAMQNRIKLFYRPAGIA 157
Cdd:pfam00345  81 RESLFWLNVLEIPPKDKPKGGQNGLQLALRSRIKLFYRPAGLA 123
PRK15249 PRK15249
fimbrial chaperone;
6-237 3.08e-42

fimbrial chaperone;


Pssm-ID: 237930 [Multi-domain]  Cd Length: 253  Bit Score: 143.79  E-value: 3.08e-42
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130048    6 WRPFNLRGIkmkgLLSLLIFSMVLPAHAGIVIYGTRIIYPAENKEVMVQLMNQGNRSSLLQAWIDDGDTSLPPEK-IQVP 84
Cdd:PRK15249   5 TRHSALYYL----IVFLFLALPATASWASVTILGSRIIYPSTASSVDVQLKNNDAIPYIVQTWFDDGDMNTSPENsSAMP 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130048   85 FMLTPPVAKIGANSGQQVKIKIMPNK-LPTNKESIFYLNVLDIPPNSPEQEG-KNALKFAMQNRIKLFYRPAGIAPVNKa 162
Cdd:PRK15249  81 FIATPPVFRIQPKAGQVVRVIYNNTKkLPQDRESVFWFNVLQVPPTNIGSDSgQNKMLVMLRSRIKLFYRPDGLGKPDN- 159

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130048  163 TFKKLLV-----NRSGNGLVIKNDSANWVTISD--VKANNVKVNYETIMIAPLESQSV----NVKSNNANNW-HLTIIDD 230
Cdd:PRK15249 160 LAKKLQIktvnkGSGKSGIVIVNPQPWFASLSNlnVKVNGASYNLDADMIAPFSSQTWwlpgKRSLKSFSGTvTVTLVND 239


                 ....*..
gi 16130048  231 HGNYISD 237
Cdd:PRK15249 240 QGARISE 246
PRK15208 PRK15208
molecular chaperone LpfB;
33-232 1.60e-30

molecular chaperone LpfB;


Pssm-ID: 237925 [Multi-domain]  Cd Length: 228  Bit Score: 112.70  E-value: 1.60e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130048   33 AGIVIYGTRIIYPAENKEVMVQLMNQG-NRSSLLQAWIDDGDTSLppekiQVPFMLTPPVAKIGANSGQQVKIKIMPNKL 111
Cdd:PRK15208  21 GGVALSSTRVIYDGSKKEASLTVNNKSkTEEFLIQSWIDDANGNK-----KTPFIITPPLFKLDPTKNNVLRIVNITNTL 95

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130048  112 PTNKESIFYLNVLDIPPNSPEQEGKNALKFAMQNRIKLFYRPAGIAPVNKATFKKLLVNRSGNGLVIKNDSANWVTISDV 191
Cdd:PRK15208  96 PQDRESVYWINVKAIPAKSEDAENKNVLQIAVRTRLKLFYRPAGLKGNSMDAWNKLRFTRAGNQIKVENPSAFNLTFNQF 175

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|...
gi 16130048  192 KANNVKVNyETIMIAPLESQSVNVKS--NNANNWHLTIIDDHG 232
Cdd:PRK15208 176 YANGRDIE-KAGMVPAKGSLNIELPAgtGKVSEVKYNIINDFG 217
PRK15211 PRK15211
fimbrial chaperone;
15-232 7.43e-29

fimbrial chaperone;


Pssm-ID: 185133 [Multi-domain]  Cd Length: 229  Bit Score: 108.37  E-value: 7.43e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130048   15 KMKGLLSLLIFSMVLPAHAGIVIYGTRIIYPAENKEVMVQLMNQGNRSSLLQAWIDDGDTSlppeKIQVPFMLTPPVAKI 94
Cdd:PRK15211   4 MKWGLVSLLSLAVCGQAMAAFVLNGTRFIYDEGRKNISFEVTNQADQTYGGQVWIDNTTQG----SSTVYMVPAPPFFKV 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130048   95 GANSGQQVKIKIMPNKLPTNKESIFYLNVLDIPPNSPEQEGkNALKFAMQNRIKLFYRPAGIAPVNKATFKKLLVNRSGN 174
Cdd:PRK15211  80 RPKEKQIIRIMKTDSALPKDRESLFWLNVQEIPPKPKASEG-NVLAVALNTQVKLIYRPKALKEGRENAEKNLQIIHRGG 158

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 16130048  175 GLVIKNDSANWVTISDVKANN--VKVNYETI----MIAPLESQSVNVKSNNANnwhLTI--IDDHG 232
Cdd:PRK15211 159 ETYLKNPTPYYFAVTGVKLNGqpVKLSDRVMneiaQLAPFSEVSLGKLSLNGT---VTVqaVNDWG 221
lfpB PRK15290
fimbrial chaperone;
19-239 8.63e-28

fimbrial chaperone;


Pssm-ID: 237934 [Multi-domain]  Cd Length: 243  Bit Score: 106.23  E-value: 8.63e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130048   19 LLSLLIFSMVLpAHAGIVIYGTRIIYPAENKEVMVQLMNQGNR-SSLLQAWIDDGDTSlppEKIQVPFMLTPPVAKIgaN 97
Cdd:PRK15290  24 ILSVFLGQPAL-TYAGVVIGGTRVVYLSNNPDKSISVFSKEEKiPYLIQAWVDPFNKE---DKSKAPFTVIPPVSRL--E 97

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130048   98 SGQQVKIKIMPNK---LPTNKESIFYLNVLDIPPnSPEQEGKNALKFAMQNRIKLFYRPAGIAPVNKATFKKLLVNRSGN 174
Cdd:PRK15290  98 PSQEKVLRIIHTKgvsLPDDRESVFWLNIKNIPP-SASNKATNSLEIAVKTRIKLFWRPASIRLIPEDAAPKVKWRREGR 176

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130048  175 GLVIKNDSANWVTISD--VKANNVKVNyetiMIAPLESQSVNVKSNNANN---WHLtiIDDHGNyISDKI 239
Cdd:PRK15290 177 NLIAENPNPIHISVMDviVDGHDVPLN----MIRPFETLTLPLPANSAGGqmtWRF--INDYGA-VSDPI 239
PRK15274 PRK15274
putative periplasmic fimbrial chaperone protein SteC; Provisional
 17-234 6.04e-27

putative periplasmic fimbrial chaperone protein SteC; Provisional


Pssm-ID: 185177 [Multi-domain]  Cd Length: 257  Bit Score: 104.09  E-value: 6.04e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130048   17 KGLLSLLIFSMVLPAHAGIVIYGTRIIYPAENKEVMVQLMNqGNRS--SLLQAWIDDGDTSlppeKIQVPFMLTPPVAKI 94
Cdd:PRK15274  10 QALIASVLLAAPLVSHSAIVPDRTRVIFNGNENSITVTLKN-GNATlpYLAQAWLEDDKFA----KDTRYFTALPPLQRI 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130048   95 GANSGQQVKIKIMPNK--LPTNKESIFYLNVLDIPPNSpeqEGKNALKFAMQNRIKLFYRPAGIAPVNKATF---KKLLV 169
Cdd:PRK15274  85 EPKSDGQVKVQPLPAAasLPQDRESLFYFNVREIPPKS---DKPNTLQLALQTRIKFFYRPVAVARQVDKTHpwqTKLTL 161

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 16130048  170 NRSGNGLVIKNDSANWVTISDV--KANNVKVNYETIMIAPLESQSVNVKSNNANNWHLT-IIDDHGNY 234
Cdd:PRK15274 162 TYQGDGVIFDNPTPFYLVISNAgsKENETASGFKNLLIAPREKVTSPIKGASLGSSPVVgYVDDYGGH 229
PRK15195 PRK15195
molecular chaperone FimC;
19-232 2.02e-26

molecular chaperone FimC;


Pssm-ID: 185117 [Multi-domain]  Cd Length: 229  Bit Score: 102.25  E-value: 2.02e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130048   19 LLSLLIFSMVLPAHAGIVIYGTRIIYPAENKEVMVQLMNQG-NRSSLLQAWIDDgdTSLPPEKiqvPFMLTPPVAKIGAN 97
Cdd:PRK15195  11 IIFYLIISASVHAAGGIALGATRVIYPADAKQTSLAIRNSHtNERYLVNSWIEN--SSGVKEK---SFIVTPPLFVSEPK 85

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130048   98 SGQQVKIKIMPNKLPTNKESIFYLNVLDIPP-NSPEQEGKNALKFAMQNRIKLFYRPAGIAPVNKATFKKLLVNRSGNGL 176
Cdd:PRK15195  86 SENTLRIIYAGPPLAADRESLFWMNVKAIPSvDKNALEGRNVLQLAILSRIKLFVRPINLQELPEEAPDTLKFSRSGNHL 165

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 16130048  177 VIKNDSANWVTISDVKANNVKVnyETIMIAPLESQSVNVKSNNANNWHLTIIDDHG 232
Cdd:PRK15195 166 KVHNPSPYYVTLVNLQVGSQKL--GNAMIAPKVNSQIPLPSGVQGKLKFQTVNDYG 219
PRK15246 PRK15246
fimbrial assembly chaperone;
30-234 3.28e-26

fimbrial assembly chaperone;


Pssm-ID: 185158 [Multi-domain]  Cd Length: 233  Bit Score: 101.58  E-value: 3.28e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130048   30 PAHAGIVIYGTRIIYPAENKEVMVQLMNQGNRSSLLQAWIDDGDTSLPPEKIQVPFMLTPPVAKIGANSGQQVKIKIMPN 109
Cdd:PRK15246   7 PAQAAVNIDRTRIIFASDDVAQSLTLSNDNTTPMLLQVWTDAGNIDASPDNSKTPLVALPPVFKMQPGELRTLRLLLSSR 86

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130048  110 K-LPTNKESIFYLNVLDIPPNSpeQEGKNA---LKFAMQNRIKLFYRPAGIAPVNKATFKKLLVNRSGNGLVIKNdSANW 185
Cdd:PRK15246  87 QqLATDRESLFWLNIYQIPPVT--QDIKNHprkLVLPLRLRLKILIRPTGLKAPTEAEEKKLRFIAKENTIRIVN-PTSW 163

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|.
gi 16130048  186 VTISDVKANNvKVNYETIMIAPLESQSVNVKSNNA--NNWHLTIIDDHGNY 234
Cdd:PRK15246 164 YMSLTLTMDN-KKSIGDIMVAPKTALDVPLTRSPTpgASINYAVINDSGNW 213
PRK15285 PRK15285
fimbrial chaperone StfD;
4-232 4.88e-26

fimbrial chaperone StfD;


Pssm-ID: 185185 [Multi-domain]  Cd Length: 250  Bit Score: 101.78  E-value: 4.88e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130048    4 IPWRPFNLRGIkmkgllSLLIFSMVLPAHAGIVIYGTRIIYPAENKEVMVQLMNQGNR-SSLLQAWIDDGDTSlppeKIQ 82
Cdd:PRK15285   2 MPLKRYNLAAV------LLLLLGGYGSAQAAIAPDRTRLVFRGEDKSISVDLKNANSKlPYLAQSWVEDEKGV----KIT 71

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130048   83 VPFMLTPPVAKIGANSGQQVKIKIMPN--KLPTNKESIFYLNVLDIPPNSpeqEGKNALKFAMQNRIKLFYRPAGIAPVN 160
Cdd:PRK15285  72 SPLIVVPPVQRIEPSAIGQVKIQGMPAlaSLPQDRETLFYYNVREIPPQS---DKPNTLQIALQTRIKVFYRPQALSKID 148

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130048  161 KAT--FKKLLVNRSGNGLVIKNDSANWVTISDVKA---NNVKVNYETIMIAPleSQSVNVKSNNANNWH---LTIIDDHG 232
Cdd:PRK15285 149 MQHpwQYKITLQRQGNGYQVSNPTGYYVVLSNASNrmdGTPARGFSPLVIAP--KSNVTLGGDASELGHspvLTYVNDYG 226
PRK15295 PRK15295
fimbrial assembly chaperone;
19-232 1.55e-25

fimbrial assembly chaperone;


Pssm-ID: 237936 [Multi-domain]  Cd Length: 226  Bit Score: 99.63  E-value: 1.55e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130048   19 LLSLLIFSMVlpAHAGIVIYGTRIIYPAENKEVMVQLMNQGNRSSLLQAWIDDGDTSLPPEKiqvPFMLTPPVAKIGANS 98
Cdd:PRK15295   7 VLVVLLTSHV--AHASIVVGGTRLVFDGNNDESSINVENKDSKANLVQSWLSVVDPQVTNKQ---AFIITPPLFRLDAGQ 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130048   99 GQQVKIKIMPNKLPTNKESIFYLNVLDIpPNSPEQEGKNALKFAMQNRIKLFYRPAGI-APVNKATFKKLLVNRSGNGLV 177
Cdd:PRK15295  82 KNSIRVIRSGAPLPADRESMYWLNIKGI-PSIDDNASANRVEISINTQIKLIYRPPALtKSTPDSQSQQLKWQTAGDVIT 160

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 16130048  178 IKNDSANWVTISDVKANNVKVNYETiMIAPLESQSVNVKSNNANNWHLT--IIDDHG 232
Cdd:PRK15295 161 VNNPTPYYMNFASVTLNSHEVKSAT-FVPPKSSASFKLGSTAAPHGTVTwrLISDYG 216
PRK15254 PRK15254
fimbrial chaperone protein StdC; Provisional
 33-232 3.52e-21

fimbrial chaperone protein StdC; Provisional


Pssm-ID: 185166 [Multi-domain]  Cd Length: 239  Bit Score: 88.68  E-value: 3.52e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130048   33 AGIVIYGTRIIYPAENKEVMVQLMNQGNRSSLL-QAWIDDGDTSLPPekiqvPFMLTPPVAKIGANSGQQVKI---KIMP 108
Cdd:PRK15254  16 AAVNVDRTRIIMDAPQKTVAITLNNDDKTTPFLaQSWVTDADGVRTD-----ALMALPPLQRIDAGQKSQVRItqvRGLT 90

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130048  109 NKLPTNKESIFYLNVLDIPPNSpeqEGKNALKFAMQNRIKLFYRP-AGIAPVNKATFKKLLVNRSGNGLVIKNDSANWVT 187
Cdd:PRK15254  91 DKLPQDRETLFWFNVRGVPPKP---EDDNVLQLAMQSQLKLFYRPkAIIRSSSDQPERKLTAERNAGHLTLRNPTPYYIT 167

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|
gi 16130048  188 ISDV---KANNVKVNYETIMIAPLESQSVN--VKSNNANNWhLTIIDDHG 232
Cdd:PRK15254 168 VAWLgadRSHRLSGFREGVMVPPLGSLPLKavLPAETRTLW-VGYIDDYG 216
PRK15192 PRK15192
pili/flagellar-assembly chaperone;
17-214 4.30e-20

pili/flagellar-assembly chaperone;


Pssm-ID: 185114 [Multi-domain]  Cd Length: 234  Bit Score: 85.52  E-value: 4.30e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130048   17 KGLLSLLIFSMVLP---AHAGIVIYGTRIIYPAENKEVMVQLMNQGNRSSLLQAWIDDGD--TSLPPEKIQVPFMLTPPV 91
Cdd:PRK15192   3 KFFLRCAIYWCLLPiswAQAGVVIGGTRFIYHAGAPALSVPVSNHSEASWLIDTHILPGGrwPGTKNEGNITPFVVTPPL 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130048   92 AKIGANSGQQVKIKIMPNKLPTNKESIFYLNVLDIPPNSPEqegKNALKFAMQNRIKLFYRPAGIAPVNKATFKKLLVNR 171
Cdd:PRK15192  83 FMLSARQENSMRVVYTGAPLPADRESLFTLSIAAIPSGKPE---ANRVQMAFRSALKLLYRPEGLAGNPQQAYRHLIWSL 159

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|...
gi 16130048  172 SGNGLVIKNDSANWVTISDVKANNVKVNYETImIAPLESQSVN 214
Cdd:PRK15192 160 TPDGATVRNPTPYYVTLFLLRANERAQDNAGV-VAPFATRQTD 201
PRK15233 PRK15233
fimbrial chaperone SefB;
34-235 7.23e-20

fimbrial chaperone SefB;


Pssm-ID: 185149 [Multi-domain]  Cd Length: 246  Bit Score: 85.16  E-value: 7.23e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130048   34 GIVIYGTRIIYPAENKEVMVQLMNQGNRSSLLQAWIDDGDTSlppekIQVPFMLTPPVAKIGANSGQQVKIKIMPNKLPT 113
Cdd:PRK15233  41 GLRLGTTRVIYKEDAPSTSFWIMNEKEYPILVQTQVYNDDKS-----SKAPFIVTPPILKVESNARTRLKVIPTSNLFNK 115

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130048  114 NKESIFYLNVLDIPP-NSPEQEGKNAL------KFAMQNRIKLFYRPAGIAPVNKATFKKLLVNRSGNGLVIKNDSANWV 186
Cdd:PRK15233 116 NEESLYWLCVKGVPPlNDNESNNKNNIttnlnvNVVTNSCIKLIYRPKTIDLTTMEIADKLKLERKGNSIVIKNPTSSYV 195

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*....
gi 16130048  187 TISDVKANNVKVNYETIMIAPLesQSVNVKSNNANNWHLTIIDDHGNYI 235
Cdd:PRK15233 196 NIANIKSGNLSFNIPNGYIEPF--GYAQLPGGVHSKITLTILDDNGAEI 242
PRK15299 PRK15299
fimbrial chaperone protein StiB; Provisional
 18-232 1.25e-19

fimbrial chaperone protein StiB; Provisional


Pssm-ID: 185199 [Multi-domain]  Cd Length: 227  Bit Score: 84.06  E-value: 1.25e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130048   18 GLLSLLIFSMVLPAhAGIVIYGTRIIYPAENKEVMVQLMNQGNRSSLLQAWIDDgdTSLPPEKIQVPFMLTPPVAKIgaN 97
Cdd:PRK15299   8 GLLCCLLCGSLAHA-AGINIGTTRVIFHGDAKDASISISNSDNVPYLIQSWAQS--ISETGASGDAPFMVTPPLFRL--N 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130048   98 SGQQVKIKIMP--NKLPTNKESIFYLNVLDIPPNSPEQEgKNALKFAMQNRIKLFYRPAGIAPVNKATFKKLLVNRSGNG 175
Cdd:PRK15299  83 GGQKNVLRIIRtgGNLPEDRESLYWLDIKSIPSSNPDNK-HNTLMLAVKAEFKLIYRPKALTQKPEEVADRLTWSRQGRT 161

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 16130048  176 LVIKNDSANWVTISDVKANNVKVNYETiMIAPLESQSVNVKSNNANNWHLTIIDDHG 232
Cdd:PRK15299 162 LTVKNPTPYYMNFATLSVGSQKVKAPR-YVAPFGNAQYTLPAAASGPIAWSIINDFG 217
PRK15188 PRK15188
fimbrial chaperone protein BcfB; Provisional
 33-198 8.05e-16

fimbrial chaperone protein BcfB; Provisional


Pssm-ID: 185110 [Multi-domain]  Cd Length: 228  Bit Score: 73.64  E-value: 8.05e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130048   33 AGIVIYGTRIIYPAENKEVMVQLMNQGNRSS-LLQAWIDDGDTSLPPEkiqvpFMLTPPVAKIGANSGQQVKIKIMPNKL 111
Cdd:PRK15188  27 GGIALGATRVIYPQGSKQTSLPIINSSASNVfLIQSWVANADGSRSTD-----FIITPPLFVIQPKKENILRIMYVGPSL 101

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130048  112 PTNKESIFYLNVLDIPPNSPEQEGKNALKFAMQNRIKLFYRPAGIAPVNKATFKKLLVNRSGNGLVIKNDSANWVTISDV 191
Cdd:PRK15188 102 PTDRESVFYLNSKAIPSVDKNKLTGNSLQIATQSVIKLFIRPKNLAEAPAHAPSTLRCRNERGQLTITNPSPYYVSMVEL 181


                 ....*..
gi 16130048  192 KANNVKV 198
Cdd:PRK15188 182 YSAGKKL 188
PRK11385 PRK11385
fimbrial chaperone;
18-194 3.08e-13

fimbrial chaperone;


Pssm-ID: 183112 [Multi-domain]  Cd Length: 236  Bit Score: 66.70  E-value: 3.08e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130048   18 GLLSLLIFSMVlpaHAGIVIYGTRIIYPAENKEVMVQLMNQGNRSSLLQAWID------DGDTSLPPekiqVPFMLTPPV 91
Cdd:PRK11385  14 AVLSLLVAGEL---QAGVVVGGTRFIFPADRESISILLTNTSQESWLINSKINrptrwaGGEASTVP----APLLAAPPL 86

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130048   92 AKIG-ANSGQQVKIKIMPNKLPTNKESIFYLNVLDIPPNSPEQEgknALKFAMQNRIKLFYRPAGIAPVNKATFKKLLVN 170
Cdd:PRK11385  87 ILLKpGTTGTLRLLRTESDILPVDRETLFELSIASVPSGKVENQ---SVKVAMRSVFKLFWRPEGLPGDPLEAYQQLRWT 163

                        170       180
                 ....*....|....*....|....
gi 16130048  171 RSGNGLVIKNDSANWVTISDVKAN 194
Cdd:PRK11385 164 RNSQGVQLTNPTPYYINLIQVSVN 187
PRK09918 PRK09918
putative fimbrial chaperone protein; Provisional
 14-183 9.44e-12

putative fimbrial chaperone protein; Provisional


Pssm-ID: 236632 [Multi-domain]  Cd Length: 230  Bit Score: 62.36  E-value: 9.44e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130048   14 IKMKGLLSLLIFSMVLPAhAGIVIYGTRIIYPAENKEVMVQLMNQGNRSSLLQAWIDDgdtsLPPEKIQVpFMLTPPVAK 93
Cdd:PRK09918   6 FFLFTALVLLSSSSAVHA-AGMVPETSVVIVEESDGEGSINVKNTDSNPILLYTTLVD----LPEDKSKL-LLVTPPVAR 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130048   94 IGANSGQQVKIkIMPNKLPTNKESIFYLNVLDIPPNSPeqeGKNALKFAMQNRIKLFYRPAGIaPVNKATFKKLLVNRSG 173
Cdd:PRK09918  80 VEPGQSQQVRF-ILKSGSPLNTEHLLRVSFEGVPPKPG---GKNKVVMPIRQDLPVLIQPAAL-PVVRDPWKLLVWSISG 154

                        170
                 ....*....|
gi 16130048  174 NGLVIKNDSA 183
Cdd:PRK09918 155 NNLVVSNPSP 164
PRK15224 PRK15224
pili assembly chaperone PapD;
39-232 1.89e-10

pili assembly chaperone PapD;


Pssm-ID: 185146 [Multi-domain]  Cd Length: 237  Bit Score: 58.99  E-value: 1.89e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130048   39 GTRIIYPAENKEVMVQLMNQGNRSSLLQAWIDDGDTSLPpekiqVPFMLTPPVAKIGANSGQQVKIKIMPNKLPTNKESI 118
Cdd:PRK15224  34 ATRVIYHAGTAGATLSVSNPQNYPILVQSSVKAADKSSP-----APFLVMPPLFRLEANQQSQLRIVRTGGDMPTDRETL 108

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130048  119 FYLNVLDIPP-NSP-EQEGKNA---LKFAMQNRIKLFYRPAGIAPVNKATFKKLLVNRSGNGLVIKNDSANWVTISDVKA 193
Cdd:PRK15224 109 QWVCIKAVPPeNEPsDTQAKGAtldLNLSINVCDKLIFRPDAVKGTPEDVAGNLRWVETGNKLKVENPTPFYMNLASVTV 188

                        170       180       190
                 ....*....|....*....|....*....|....*....
gi 16130048  194 NNVKVNyETIMIAPLESQSVNVKSNNANNWHLTIIDDHG 232
Cdd:PRK15224 189 GGKPIT-GLEYIPPFADKTLNMPGSAHGDIEWRVITDFG 226
PapD_C pfam02753
Pili assembly chaperone PapD, C-terminal domain; Ig-like beta-sandwich fold. This domain is ...
 178-236 1.09e-06

Pili assembly chaperone PapD, C-terminal domain; Ig-like beta-sandwich fold. This domain is the C-terminal part of the pilus and flagellar-assembly chaperone protein PapD.


Pssm-ID: 426960 [Multi-domain]  Cd Length: 63  Bit Score: 44.95  E-value: 1.09e-06
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 16130048   178 IKNDSANWVTISDVKANNVKVNYETI--MIAPLESQSVNVKSNNANNW--HLTIIDDHGNYIS 236
Cdd:pfam02753   1 VKNPTPYYVTFSSLSLGGGGKELALDpgMVAPFSSQTFAGLPAPAAGGtvSYTYINDYGGIVP 63
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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