|
Name |
Accession |
Description |
Interval |
E-value |
| PRK15068 |
PRK15068 |
tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB; |
1-322 |
0e+00 |
|
tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB;
Pssm-ID: 237898 Cd Length: 322 Bit Score: 670.41 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16129824 1 MIDFGNFYSLIAKNHLSHWLETLPAQIANWQREQQHGLFKQWSNAVEFLPEIKPYRLDLLHSVTAESEEPLSAGQIKRIE 80
Cdd:PRK15068 1 MIDFSNFYQLIAKNPLSHWLETLPAQLAAWQREQLHGDFKKWEKALEQLPELTPDRLDLLDSVTIGSEEPLSEGQRKRIE 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16129824 81 TLMRNLMPWRKGPFSLYGVNIDTEWRSDWKWDRVLPHLSDLTGRTILDVGCGSGYHMWRMIGAGAHLAVGIDPTQLFLCQ 160
Cdd:PRK15068 81 NLLRALMPWRKGPFSLFGIHIDTEWRSDWKWDRVLPHLSPLKGRTVLDVGCGNGYHMWRMLGAGAKLVVGIDPSQLFLCQ 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16129824 161 FEAVRKLLGNDQRAHLLPLGIEQLPALKAFDTVFSMGVLYHRRSPLEHLWQLKDQLVNEGELVLETLVIDGDENTVLVPG 240
Cdd:PRK15068 161 FEAVRKLLGNDQRAHLLPLGIEQLPALKAFDTVFSMGVLYHRRSPLDHLKQLKDQLVPGGELVLETLVIDGDENTVLVPG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16129824 241 DRYAQMRNVYFIPSALALKNWLKKCGFVDIRIADVSVTTTEEQRRTEWMVTESLADFLDPHDPGKTVEGYPAPKRAVLIA 320
Cdd:PRK15068 241 DRYAKMRNVYFIPSVPALKNWLERAGFKDVRIVDVSVTTTEEQRKTEWMTTESLADFLDPNDPSKTIEGYPAPKRAVLIA 320
|
..
gi 16129824 321 RK 322
Cdd:PRK15068 321 RK 322
|
|
| Methyltransf_9 |
pfam08003 |
Protein of unknown function (DUF1698); This family contains many hypothetical proteins. It ... |
7-322 |
0e+00 |
|
Protein of unknown function (DUF1698); This family contains many hypothetical proteins. It also includes two putative methyltransferase proteins, Swiss:Q8EEE6 and Swiss:Q88MX8.
Pssm-ID: 429781 [Multi-domain] Cd Length: 315 Bit Score: 637.91 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16129824 7 FYSLIAKNHLSHWLETLPAQIANWQrEQQHGLFKQWSNAVEFLPEIKPYRLDLLHSVTAESEEPLSAGQIKRIETLMRNL 86
Cdd:pfam08003 1 FYQQIADTNLSHWLNTLPAQLQTWQ-EQEHGDFKRWRKALEKLPRLKPDSIDLKNSVTAETEEPLSHGEQKRLEKLLRAL 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16129824 87 MPWRKGPFSLYGVNIDTEWRSDWKWDRVLPHLSDLTGRTILDVGCGSGYHMWRMIGAGAHLAVGIDPTQLFLCQFEAVRK 166
Cdd:pfam08003 80 MPWRKGPFHLFGVHIDTEWRSDWKWDRVLPHLSPLKGRTILDVGCGNGYHMWRMLGEGAAMVVGIDPSELFLCQFEAVRK 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16129824 167 LLGNDQRAHLLPLGIEQLPALKAFDTVFSMGVLYHRRSPLEHLWQLKDQLVNEGELVLETLVIDGDENTVLVPGDRYAQM 246
Cdd:pfam08003 160 LLGNDQRAHLLPLGIEQLPALAAFDTVFSMGVLYHRRSPLDHLLQLKDQLVKGGELVLETLVIDGDENTVLVPGDRYAQM 239
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 16129824 247 RNVYFIPSALALKNWLKKCGFVDIRIADVSVTTTEEQRRTEWMVTESLADFLDPHDPGKTVEGYPAPKRAVLIARK 322
Cdd:pfam08003 240 RNVYFIPSAAALINWLEKCGFVDVRIVDVSVTTLEEQRRTEWMENESLKDFLDPEDPSKTIEGYPAPKRAVLIARK 315
|
|
| TIGR00452 |
TIGR00452 |
tRNA (mo5U34)-methyltransferase; This model describes CmoB, the enzyme tRNA (mo5U34) ... |
7-321 |
0e+00 |
|
tRNA (mo5U34)-methyltransferase; This model describes CmoB, the enzyme tRNA (mo5U34)-methyltransferase involved in tRNA wobble base modification. [Unknown function, Enzymes of unknown specificity]
Pssm-ID: 273084 Cd Length: 316 Bit Score: 579.52 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16129824 7 FYSLIAKNHLSHWLETLPAQIANWQREQQHGLFKQWSNAVEFLPEIKPYRLDLLHS-VTAESEEPLSAGQIKRIETLMRN 85
Cdd:TIGR00452 1 LYQALADTPLAHWLETLPAQLEAWLQPPRHGDLPRWQKALAQLPELPPSQVDLDSDaVTIGSAGDLSEGQRAQLENALRA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16129824 86 LMPWRKGPFSLYGVNIDTEWRSDWKWDRVLPHLSDLTGRTILDVGCGSGYHMWRMIGAGAHLAVGIDPTQLFLCQFEAVR 165
Cdd:TIGR00452 81 LMPWRKGPFELFGIHIDTEWRSDWKWDRLAPHISPLKGRRVLDVGCGNGYHMWRMLGAGAKLVVGIDPSLLFLMQFLAIK 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16129824 166 KLLGNDqRAHLLPLGIEQLPA-LKAFDTVFSMGVLYHRRSPLEHLWQLKDQLVNEGELVLETLVIDGDENTVLVPGDRYA 244
Cdd:TIGR00452 161 HLLGDA-PVHFLPLGIEDLPPnLKAFDTVFSMGVLYHRRSPLDHLLQLKDQLRPGGELVLETLVIDGDEGTVLVPEDRYA 239
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 16129824 245 QMRNVYFIPSALALKNWLKKCGFVDIRIADVSVTTTEEQRRTEWMVTESLADFLDPHDPGKTVEGYPAPKRAVLIAR 321
Cdd:TIGR00452 240 QMRNVWFLPSVAALKNWLERCGFKDVRCVDVSVTSTEEQRSTDWMTFESLADFLDPEDPSLTIEGYPAPKRAVLIAR 316
|
|
| UbiG |
COG2227 |
2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme transport and ... |
111-226 |
8.13e-22 |
|
2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme transport and metabolism]; 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase is part of the Pathway/BioSystem: Ubiquinone biosynthesis
Pssm-ID: 441829 [Multi-domain] Cd Length: 126 Bit Score: 88.92 E-value: 8.13e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16129824 111 WDRVLPHLSD---LTGRTILDVGCGSGYHMWRMIGAGAHlAVGIDPTQLFLcqfeAVRKLLGNDQRAHLLPLGIEQLP-A 186
Cdd:COG2227 10 WDRRLAALLArllPAGGRVLDVGCGTGRLALALARRGAD-VTGVDISPEAL----EIARERAAELNVDFVQGDLEDLPlE 84
|
90 100 110 120
....*....|....*....|....*....|....*....|
gi 16129824 187 LKAFDTVFSMGVLYHRRSPLEHLWQLKDQLVNEGELVLET 226
Cdd:COG2227 85 DGSFDLVICSEVLEHLPDPAALLRELARLLKPGGLLLLST 124
|
|
| AdoMet_MTases |
cd02440 |
S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; ... |
125-229 |
5.76e-04 |
|
S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). There are at least five structurally distinct families of AdoMet-MTases, class I being the largest and most diverse. Within this class enzymes can be classified by different substrate specificities (small molecules, lipids, nucleic acids, etc.) and different target atoms for methylation (nitrogen, oxygen, carbon, sulfur, etc.).
Pssm-ID: 100107 [Multi-domain] Cd Length: 107 Bit Score: 38.95 E-value: 5.76e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16129824 125 TILDVGCGSGYHMWRMIGAGAHLAVGIDPTQLFLcQFEAVRKLLGNDQRAHLLPLGIEQLP--ALKAFDTVFSMGVLYHR 202
Cdd:cd02440 1 RVLDLGCGTGALALALASGPGARVTGVDISPVAL-ELARKAAAALLADNVEVLKGDAEELPpeADESFDVIISDPPLHHL 79
|
90 100
....*....|....*....|....*...
gi 16129824 203 -RSPLEHLWQLKDQLVNEGELVLETLVI 229
Cdd:cd02440 80 vEDLARFLEEARRLLKPGGVLVLTLVLA 107
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| PRK15068 |
PRK15068 |
tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB; |
1-322 |
0e+00 |
|
tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB;
Pssm-ID: 237898 Cd Length: 322 Bit Score: 670.41 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16129824 1 MIDFGNFYSLIAKNHLSHWLETLPAQIANWQREQQHGLFKQWSNAVEFLPEIKPYRLDLLHSVTAESEEPLSAGQIKRIE 80
Cdd:PRK15068 1 MIDFSNFYQLIAKNPLSHWLETLPAQLAAWQREQLHGDFKKWEKALEQLPELTPDRLDLLDSVTIGSEEPLSEGQRKRIE 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16129824 81 TLMRNLMPWRKGPFSLYGVNIDTEWRSDWKWDRVLPHLSDLTGRTILDVGCGSGYHMWRMIGAGAHLAVGIDPTQLFLCQ 160
Cdd:PRK15068 81 NLLRALMPWRKGPFSLFGIHIDTEWRSDWKWDRVLPHLSPLKGRTVLDVGCGNGYHMWRMLGAGAKLVVGIDPSQLFLCQ 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16129824 161 FEAVRKLLGNDQRAHLLPLGIEQLPALKAFDTVFSMGVLYHRRSPLEHLWQLKDQLVNEGELVLETLVIDGDENTVLVPG 240
Cdd:PRK15068 161 FEAVRKLLGNDQRAHLLPLGIEQLPALKAFDTVFSMGVLYHRRSPLDHLKQLKDQLVPGGELVLETLVIDGDENTVLVPG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16129824 241 DRYAQMRNVYFIPSALALKNWLKKCGFVDIRIADVSVTTTEEQRRTEWMVTESLADFLDPHDPGKTVEGYPAPKRAVLIA 320
Cdd:PRK15068 241 DRYAKMRNVYFIPSVPALKNWLERAGFKDVRIVDVSVTTTEEQRKTEWMTTESLADFLDPNDPSKTIEGYPAPKRAVLIA 320
|
..
gi 16129824 321 RK 322
Cdd:PRK15068 321 RK 322
|
|
| Methyltransf_9 |
pfam08003 |
Protein of unknown function (DUF1698); This family contains many hypothetical proteins. It ... |
7-322 |
0e+00 |
|
Protein of unknown function (DUF1698); This family contains many hypothetical proteins. It also includes two putative methyltransferase proteins, Swiss:Q8EEE6 and Swiss:Q88MX8.
Pssm-ID: 429781 [Multi-domain] Cd Length: 315 Bit Score: 637.91 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16129824 7 FYSLIAKNHLSHWLETLPAQIANWQrEQQHGLFKQWSNAVEFLPEIKPYRLDLLHSVTAESEEPLSAGQIKRIETLMRNL 86
Cdd:pfam08003 1 FYQQIADTNLSHWLNTLPAQLQTWQ-EQEHGDFKRWRKALEKLPRLKPDSIDLKNSVTAETEEPLSHGEQKRLEKLLRAL 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16129824 87 MPWRKGPFSLYGVNIDTEWRSDWKWDRVLPHLSDLTGRTILDVGCGSGYHMWRMIGAGAHLAVGIDPTQLFLCQFEAVRK 166
Cdd:pfam08003 80 MPWRKGPFHLFGVHIDTEWRSDWKWDRVLPHLSPLKGRTILDVGCGNGYHMWRMLGEGAAMVVGIDPSELFLCQFEAVRK 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16129824 167 LLGNDQRAHLLPLGIEQLPALKAFDTVFSMGVLYHRRSPLEHLWQLKDQLVNEGELVLETLVIDGDENTVLVPGDRYAQM 246
Cdd:pfam08003 160 LLGNDQRAHLLPLGIEQLPALAAFDTVFSMGVLYHRRSPLDHLLQLKDQLVKGGELVLETLVIDGDENTVLVPGDRYAQM 239
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 16129824 247 RNVYFIPSALALKNWLKKCGFVDIRIADVSVTTTEEQRRTEWMVTESLADFLDPHDPGKTVEGYPAPKRAVLIARK 322
Cdd:pfam08003 240 RNVYFIPSAAALINWLEKCGFVDVRIVDVSVTTLEEQRRTEWMENESLKDFLDPEDPSKTIEGYPAPKRAVLIARK 315
|
|
| TIGR00452 |
TIGR00452 |
tRNA (mo5U34)-methyltransferase; This model describes CmoB, the enzyme tRNA (mo5U34) ... |
7-321 |
0e+00 |
|
tRNA (mo5U34)-methyltransferase; This model describes CmoB, the enzyme tRNA (mo5U34)-methyltransferase involved in tRNA wobble base modification. [Unknown function, Enzymes of unknown specificity]
Pssm-ID: 273084 Cd Length: 316 Bit Score: 579.52 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16129824 7 FYSLIAKNHLSHWLETLPAQIANWQREQQHGLFKQWSNAVEFLPEIKPYRLDLLHS-VTAESEEPLSAGQIKRIETLMRN 85
Cdd:TIGR00452 1 LYQALADTPLAHWLETLPAQLEAWLQPPRHGDLPRWQKALAQLPELPPSQVDLDSDaVTIGSAGDLSEGQRAQLENALRA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16129824 86 LMPWRKGPFSLYGVNIDTEWRSDWKWDRVLPHLSDLTGRTILDVGCGSGYHMWRMIGAGAHLAVGIDPTQLFLCQFEAVR 165
Cdd:TIGR00452 81 LMPWRKGPFELFGIHIDTEWRSDWKWDRLAPHISPLKGRRVLDVGCGNGYHMWRMLGAGAKLVVGIDPSLLFLMQFLAIK 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16129824 166 KLLGNDqRAHLLPLGIEQLPA-LKAFDTVFSMGVLYHRRSPLEHLWQLKDQLVNEGELVLETLVIDGDENTVLVPGDRYA 244
Cdd:TIGR00452 161 HLLGDA-PVHFLPLGIEDLPPnLKAFDTVFSMGVLYHRRSPLDHLLQLKDQLRPGGELVLETLVIDGDEGTVLVPEDRYA 239
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 16129824 245 QMRNVYFIPSALALKNWLKKCGFVDIRIADVSVTTTEEQRRTEWMVTESLADFLDPHDPGKTVEGYPAPKRAVLIAR 321
Cdd:TIGR00452 240 QMRNVWFLPSVAALKNWLERCGFKDVRCVDVSVTSTEEQRSTDWMTFESLADFLDPEDPSLTIEGYPAPKRAVLIAR 316
|
|
| UbiG |
COG2227 |
2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme transport and ... |
111-226 |
8.13e-22 |
|
2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme transport and metabolism]; 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase is part of the Pathway/BioSystem: Ubiquinone biosynthesis
Pssm-ID: 441829 [Multi-domain] Cd Length: 126 Bit Score: 88.92 E-value: 8.13e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16129824 111 WDRVLPHLSD---LTGRTILDVGCGSGYHMWRMIGAGAHlAVGIDPTQLFLcqfeAVRKLLGNDQRAHLLPLGIEQLP-A 186
Cdd:COG2227 10 WDRRLAALLArllPAGGRVLDVGCGTGRLALALARRGAD-VTGVDISPEAL----EIARERAAELNVDFVQGDLEDLPlE 84
|
90 100 110 120
....*....|....*....|....*....|....*....|
gi 16129824 187 LKAFDTVFSMGVLYHRRSPLEHLWQLKDQLVNEGELVLET 226
Cdd:COG2227 85 DGSFDLVICSEVLEHLPDPAALLRELARLLKPGGLLLLST 124
|
|
| UbiE |
COG2226 |
Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG [Coenzyme transport and metabolism]; ... |
111-267 |
1.28e-13 |
|
Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG [Coenzyme transport and metabolism]; Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG is part of the Pathway/BioSystem: Biotin biosynthesis
Pssm-ID: 441828 [Multi-domain] Cd Length: 143 Bit Score: 66.94 E-value: 1.28e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16129824 111 WDRVLPHLSDLTGRTILDVGCGSGYHMWRMIGAGAHLaVGIDPTQLFLCQfeAVRKLLGNDQRAHLLPLGIEQLP-ALKA 189
Cdd:COG2226 11 REALLAALGLRPGARVLDLGCGTGRLALALAERGARV-TGVDISPEMLEL--ARERAAEAGLNVEFVVGDAEDLPfPDGS 87
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 16129824 190 FDTVFSMGVLYHRRSPLEHLWQLKDQLVNEGELVletlVIDgdentvlvpgdryaqmrnvYFIPSALALKNWLKKCGF 267
Cdd:COG2226 88 FDLVISSFVLHHLPDPERALAEIARVLKPGGRLV----VVD-------------------FSPPDLAELEELLAEAGF 142
|
|
| Methyltransf_25 |
pfam13649 |
Methyltransferase domain; This family appears to be a methyltransferase domain. |
126-201 |
9.51e-10 |
|
Methyltransferase domain; This family appears to be a methyltransferase domain.
Pssm-ID: 463945 [Multi-domain] Cd Length: 96 Bit Score: 54.88 E-value: 9.51e-10
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 16129824 126 ILDVGCGSGYHMWRMIGAGAHLAVGIDPTQLFLCQfeAVRKLLGNDQRAHLLPLGIEQLPALKA-FDTVFSMGVLYH 201
Cdd:pfam13649 1 VLDLGCGTGRLTLALARRGGARVTGVDLSPEMLER--ARERAAEAGLNVEFVQGDAEDLPFPDGsFDLVVSSGVLHH 75
|
|
| SmtA |
COG0500 |
SAM-dependent methyltransferase [Secondary metabolites biosynthesis, transport and catabolism, ... |
115-225 |
1.13e-07 |
|
SAM-dependent methyltransferase [Secondary metabolites biosynthesis, transport and catabolism, General function prediction only];
Pssm-ID: 440266 [Multi-domain] Cd Length: 199 Bit Score: 51.46 E-value: 1.13e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16129824 115 LPHLSDltGRTILDVGCGSGYHMWRMIGAGAHLAVGID--PTQLFLCQFEAVRKLLGNdqrAHLLPLGIEQLPALKA--F 190
Cdd:COG0500 21 LERLPK--GGRVLDLGCGTGRNLLALAARFGGRVIGIDlsPEAIALARARAAKAGLGN---VEFLVADLAELDPLPAesF 95
|
90 100 110
....*....|....*....|....*....|....*..
gi 16129824 191 DTVFSMGVLYH-RRSPLEHLWQ-LKDQLVNEGELVLE 225
Cdd:COG0500 96 DLVVAFGVLHHlPPEEREALLReLARALKPGGVLLLS 132
|
|
| Cfa |
COG2230 |
Cyclopropane fatty-acyl-phospholipid synthase and related methyltransferases [Lipid transport ... |
104-201 |
5.86e-07 |
|
Cyclopropane fatty-acyl-phospholipid synthase and related methyltransferases [Lipid transport and metabolism];
Pssm-ID: 441831 [Multi-domain] Cd Length: 158 Bit Score: 48.39 E-value: 5.86e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16129824 104 EWRSDWKWDRVLPHLSDLTGRTILDVGCGSGYHMWRMIGAGAHLAVGID--PTQLFLCQFEAVRKLLGNdqRAHLLPLGI 181
Cdd:COG2230 33 EEAQEAKLDLILRKLGLKPGMRVLDIGCGWGGLALYLARRYGVRVTGVTlsPEQLEYARERAAEAGLAD--RVEVRLADY 110
|
90 100
....*....|....*....|
gi 16129824 182 EQLPALKAFDTVFSMGVLYH 201
Cdd:COG2230 111 RDLPADGQFDAIVSIGMFEH 130
|
|
| Tam |
COG4106 |
Trans-aconitate methyltransferase [Energy production and conversion]; |
123-226 |
2.08e-06 |
|
Trans-aconitate methyltransferase [Energy production and conversion];
Pssm-ID: 443282 [Multi-domain] Cd Length: 100 Bit Score: 45.58 E-value: 2.08e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16129824 123 GRTILDVGCGSGYHMWRMIGA--GAHLaVGIDPTQLFLcqfEAVRKLLGNdqrAHLLPLGIEQLPALKAFDTVFSMGVLY 200
Cdd:COG4106 2 PRRVLDLGCGTGRLTALLAERfpGARV-TGVDLSPEML---ARARARLPN---VRFVVADLRDLDPPEPFDLVVSNAALH 74
|
90 100
....*....|....*....|....*.
gi 16129824 201 HRRSPLEHLWQLKDQLVNEGELVLET 226
Cdd:COG4106 75 WLPDHAALLARLAAALAPGGVLAVQV 100
|
|
| Methyltransf_23 |
pfam13489 |
Methyltransferase domain; This family appears to be a methyltransferase domain. |
122-270 |
2.67e-06 |
|
Methyltransferase domain; This family appears to be a methyltransferase domain.
Pssm-ID: 404385 [Multi-domain] Cd Length: 162 Bit Score: 46.65 E-value: 2.67e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16129824 122 TGRTILDVGCGSGyHMWRMIGAGAHLAVGIDPTqlflcqFEAVRKLLGNDQRAHLLPlgIEQLPALKAFDTVFSMGVLYH 201
Cdd:pfam13489 22 SPGRVLDFGCGTG-IFLRLLRAQGFSVTGVDPS------PIAIERALLNVRFDQFDE--QEAAVPAGKFDVIVAREVLEH 92
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 16129824 202 RRSPLEHLWQLKDQLVNEGELVLETLVIDGDENTVL--VPGDRYAQMRNVYFipSALALKNWLKKCGFVDI 270
Cdd:pfam13489 93 VPDPPALLRQIAALLKPGGLLLLSTPLASDEADRLLleWPYLRPRNGHISLF--SARSLKRLLEEAGFEVV 161
|
|
| Methyltransf_31 |
pfam13847 |
Methyltransferase domain; This family appears to have methyltransferase activity. |
125-232 |
1.02e-05 |
|
Methyltransferase domain; This family appears to have methyltransferase activity.
Pssm-ID: 463998 [Multi-domain] Cd Length: 150 Bit Score: 44.72 E-value: 1.02e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16129824 125 TILDVGCGSGYHMWRM---IGAGAHLaVGID--PTQLFLCQFEAVRKLLGNdqrAHLLPLGIEQLP---ALKAFDTVFSM 196
Cdd:pfam13847 6 RVLDLGCGTGHLSFELaeeLGPNAEV-VGIDisEEAIEKARENAQKLGFDN---VEFEQGDIEELPellEDDKFDVVISN 81
|
90 100 110
....*....|....*....|....*....|....*.
gi 16129824 197 GVLYHRRSPLEHLWQLKDQLVNEGELVLETLVIDGD 232
Cdd:pfam13847 82 CVLNHIPDPDKVLQEILRVLKPGGRLIISDPDSLAE 117
|
|
| Methyltransf_11 |
pfam08241 |
Methyltransferase domain; Members of this family are SAM dependent methyltransferases. |
127-201 |
2.18e-05 |
|
Methyltransferase domain; Members of this family are SAM dependent methyltransferases.
Pssm-ID: 462406 [Multi-domain] Cd Length: 94 Bit Score: 42.65 E-value: 2.18e-05
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 16129824 127 LDVGCGSGYHMWRMIGAGAHLaVGIDPTQLFLcqfeAVRKLLGNDQRAHLLPLGIEQLP-ALKAFDTVFSMGVLYH 201
Cdd:pfam08241 1 LDVGCGTGLLTELLARLGARV-TGVDISPEML----ELAREKAPREGLTFVVGDAEDLPfPDNSFDLVLSSEVLHH 71
|
|
| COG2263 |
COG2263 |
Predicted RNA methylase [General function prediction only]; |
120-195 |
1.10e-04 |
|
Predicted RNA methylase [General function prediction only];
Pssm-ID: 441864 [Multi-domain] Cd Length: 199 Bit Score: 42.58 E-value: 1.10e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16129824 120 DLTGRTILDVGCGSGyhmwrMIGAGAHLA-------VGIDPTQLFLcqfeAVRKLLGNDQRAHLLPLGIEQLPALKAFDT 192
Cdd:COG2263 43 DIEGKTVLDLGCGTG-----MLAIGAALLgakkvvgVDIDPEALEI----ARENAERLGVRVDFIRADVTRIPLGGSVDT 113
|
...
gi 16129824 193 VFS 195
Cdd:COG2263 114 VVM 116
|
|
| PRK07580 |
PRK07580 |
Mg-protoporphyrin IX methyl transferase; Validated |
115-209 |
1.36e-04 |
|
Mg-protoporphyrin IX methyl transferase; Validated
Pssm-ID: 236059 [Multi-domain] Cd Length: 230 Bit Score: 42.52 E-value: 1.36e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16129824 115 LPHLSDLTGRTILDVGCGSGYHMWRMIGAGAHL-AVGIDPTQLFLCQfEAVRKLLGNDqRAHLLPLGIEQLpaLKAFDTV 193
Cdd:PRK07580 56 LPADGDLTGLRILDAGCGVGSLSIPLARRGAKVvASDISPQMVEEAR-ERAPEAGLAG-NITFEVGDLESL--LGRFDTV 131
|
90 100
....*....|....*....|.
gi 16129824 194 FSMGVLYHRRSP-----LEHL 209
Cdd:PRK07580 132 VCLDVLIHYPQEdaarmLAHL 152
|
|
| COG4976 |
COG4976 |
Predicted methyltransferase, contains TPR repeat [General function prediction only]; |
112-232 |
3.61e-04 |
|
Predicted methyltransferase, contains TPR repeat [General function prediction only];
Pssm-ID: 444001 [Multi-domain] Cd Length: 181 Bit Score: 40.75 E-value: 3.61e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16129824 112 DRVLPHLSDLTGRTILDVGCGSGYHMWRMIGAGAHLaVGIDPTQlflcqfEAVRKLLGNDQRAHLLPLGIEQLPAL-KAF 190
Cdd:COG4976 36 EELLARLPPGPFGRVLDLGCGTGLLGEALRPRGYRL-TGVDLSE------EMLAKAREKGVYDRLLVADLADLAEPdGRF 108
|
90 100 110 120
....*....|....*....|....*....|....*....|..
gi 16129824 191 DTVFSMGVLYHRRSPLEHLWQLKDQLVNEGELVLETLVIDGD 232
Cdd:COG4976 109 DLIVAADVLTYLGDLAAVFAGVARALKPGGLFIFSVEDADGS 150
|
|
| Methyltransf_12 |
pfam08242 |
Methyltransferase domain; Members of this family are SAM dependent methyltransferases. |
127-212 |
4.30e-04 |
|
Methyltransferase domain; Members of this family are SAM dependent methyltransferases.
Pssm-ID: 400515 [Multi-domain] Cd Length: 98 Bit Score: 38.89 E-value: 4.30e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16129824 127 LDVGCGSGYHMWRMIGAGAHLA-VGIDPTQLFLcqfEAVRKLLGNDQRAHLLPLGIEQLPALK----AFDTVFSMGVLYH 201
Cdd:pfam08242 1 LEIGCGTGTLLRALLEALPGLEyTGLDISPAAL---EAARERLAALGLLNAVRVELFQLDLGEldpgSFDVVVASNVLHH 77
|
90
....*....|....
gi 16129824 202 ---RRSPLEHLWQL 212
Cdd:pfam08242 78 ladPRAVLRNIRRL 91
|
|
| AdoMet_MTases |
cd02440 |
S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; ... |
125-229 |
5.76e-04 |
|
S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). There are at least five structurally distinct families of AdoMet-MTases, class I being the largest and most diverse. Within this class enzymes can be classified by different substrate specificities (small molecules, lipids, nucleic acids, etc.) and different target atoms for methylation (nitrogen, oxygen, carbon, sulfur, etc.).
Pssm-ID: 100107 [Multi-domain] Cd Length: 107 Bit Score: 38.95 E-value: 5.76e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16129824 125 TILDVGCGSGYHMWRMIGAGAHLAVGIDPTQLFLcQFEAVRKLLGNDQRAHLLPLGIEQLP--ALKAFDTVFSMGVLYHR 202
Cdd:cd02440 1 RVLDLGCGTGALALALASGPGARVTGVDISPVAL-ELARKAAAALLADNVEVLKGDAEELPpeADESFDVIISDPPLHHL 79
|
90 100
....*....|....*....|....*...
gi 16129824 203 -RSPLEHLWQLKDQLVNEGELVLETLVI 229
Cdd:cd02440 80 vEDLARFLEEARRLLKPGGVLVLTLVLA 107
|
|
| |
