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Conserved domains on  [gi|90111329|ref|NP_416291|]
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DUF1315 domain-containing protein YeaC [Escherichia coli str. K-12 substr. MG1655]

Protein Classification

YeaC family protein( domain architecture ID 10006958)

YeaC family protein similar to Escherichia coli protein YeaC

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
yeaC COG3139
Uncharacterized conserved protein YeaC, DUF1315 family [Function unknown];
1-90 2.39e-52

Uncharacterized conserved protein YeaC, DUF1315 family [Function unknown];


:

Pssm-ID: 442373  Cd Length: 92  Bit Score: 158.13  E-value: 2.39e-52
                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111329  1 MNLDDIINSMMPEVYQRLSTAVELGKWPDGVALTEEQKENCLQLVMLWQARHNIEAQHMTIDTNGQMVMKSKQQLKEDFG 80
Cdd:COG3139  1 MNFEQLIASMTPEIYERLKTAVELGKWPDGRALTEEQRELCLQAVMLYQARHNPEEQHMGIGPRGEIVCKSKQELKQQFG 80

                       90
               ....*....|
gi 90111329 81 ISAKPIAMFK 90
Cdd:COG3139 81 DEEEPIARIK 90
 
Name Accession Description Interval E-value
yeaC COG3139
Uncharacterized conserved protein YeaC, DUF1315 family [Function unknown];
1-90 2.39e-52

Uncharacterized conserved protein YeaC, DUF1315 family [Function unknown];


Pssm-ID: 442373  Cd Length: 92  Bit Score: 158.13  E-value: 2.39e-52
                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111329  1 MNLDDIINSMMPEVYQRLSTAVELGKWPDGVALTEEQKENCLQLVMLWQARHNIEAQHMTIDTNGQMVMKSKQQLKEDFG 80
Cdd:COG3139  1 MNFEQLIASMTPEIYERLKTAVELGKWPDGRALTEEQRELCLQAVMLYQARHNPEEQHMGIGPRGEIVCKSKQELKQQFG 80

                       90
               ....*....|
gi 90111329 81 ISAKPIAMFK 90
Cdd:COG3139 81 DEEEPIARIK 90
DUF1315 pfam07023
Protein of unknown function (DUF1315); This family consists of several bacterial proteins of ...
 4-80 1.28e-26

Protein of unknown function (DUF1315); This family consists of several bacterial proteins of around 90 residues in length. The function of this family is unknown.


Pssm-ID: 429252  Cd Length: 82  Bit Score: 92.98  E-value: 1.28e-26
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 90111329    4 DDIINSMMPEVYQRLSTAVELGKWPDGVALTEEQKENCLQLVMLWQARHNIEAQHMtidtnGQMVMKSK--QQLKEDFG 80
Cdd:pfam07023  1 QQLLASMTPDVYQRLKRAVEIGKWPDGSRLTEEQRDLCMQAVMAYEAKHLPEDEHM-----GYIPRKSKegNELKQHED 74
 
Name Accession Description Interval E-value
yeaC COG3139
Uncharacterized conserved protein YeaC, DUF1315 family [Function unknown];
1-90 2.39e-52

Uncharacterized conserved protein YeaC, DUF1315 family [Function unknown];


Pssm-ID: 442373  Cd Length: 92  Bit Score: 158.13  E-value: 2.39e-52
                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111329  1 MNLDDIINSMMPEVYQRLSTAVELGKWPDGVALTEEQKENCLQLVMLWQARHNIEAQHMTIDTNGQMVMKSKQQLKEDFG 80
Cdd:COG3139  1 MNFEQLIASMTPEIYERLKTAVELGKWPDGRALTEEQRELCLQAVMLYQARHNPEEQHMGIGPRGEIVCKSKQELKQQFG 80

                       90
               ....*....|
gi 90111329 81 ISAKPIAMFK 90
Cdd:COG3139 81 DEEEPIARIK 90
DUF1315 pfam07023
Protein of unknown function (DUF1315); This family consists of several bacterial proteins of ...
 4-80 1.28e-26

Protein of unknown function (DUF1315); This family consists of several bacterial proteins of around 90 residues in length. The function of this family is unknown.


Pssm-ID: 429252  Cd Length: 82  Bit Score: 92.98  E-value: 1.28e-26
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 90111329    4 DDIINSMMPEVYQRLSTAVELGKWPDGVALTEEQKENCLQLVMLWQARHNIEAQHMtidtnGQMVMKSK--QQLKEDFG 80
Cdd:pfam07023  1 QQLLASMTPDVYQRLKRAVEIGKWPDGSRLTEEQRDLCMQAVMAYEAKHLPEDEHM-----GYIPRKSKegNELKQHED 74
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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