mRNA interferase toxin RelE [Escherichia coli str. K-12 substr. MG1655]
type II toxin-antitoxin system RelE family toxin( domain architecture ID 10005193)
type II toxin-antitoxin (TA) system RelE family toxin is the RelE-like toxin component of a type II toxin-antitoxin system, its activity is attenuated by interaction with its cognate antitoxin
List of domain hits
Name | Accession | Description | Interval | E-value | |||
RelE | COG2026 | mRNA-degrading endonuclease RelE, toxin component of the RelBE toxin-antitoxin system [Defense ... |
2-87 | 4.63e-20 | |||
mRNA-degrading endonuclease RelE, toxin component of the RelBE toxin-antitoxin system [Defense mechanisms]; : Pssm-ID: 441629 Cd Length: 85 Bit Score: 76.78 E-value: 4.63e-20
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Name | Accession | Description | Interval | E-value | |||
RelE | COG2026 | mRNA-degrading endonuclease RelE, toxin component of the RelBE toxin-antitoxin system [Defense ... |
2-87 | 4.63e-20 | |||
mRNA-degrading endonuclease RelE, toxin component of the RelBE toxin-antitoxin system [Defense mechanisms]; Pssm-ID: 441629 Cd Length: 85 Bit Score: 76.78 E-value: 4.63e-20
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RelE_StbE | TIGR02385 | addiction module toxin, RelE/StbE family; Plasmids may be maintained stably in bacterial ... |
4-87 | 4.82e-10 | |||
addiction module toxin, RelE/StbE family; Plasmids may be maintained stably in bacterial populations through the action of addiction modules, in which a toxin and antidote are encoded in a cassette on the plasmid. In any daughter cell that lacks the plasmid, the toxin persists and is lethal after the antidote protein is depleted. Toxin/antitoxin pairs are also found on main chromosomes, and likely represent selfish DNA. Sequences in the seed for this alignment all are found adjacent to RelB/DinJ family antitoxin genes (TIGR02384), as are most genes found by the resulting model. StbE from Morganella morganii plasmid R485 shows typical behaviour for an addiction module toxin. It cannot be cloned without its partner (the antitoxin), whereas its partner cannot confer plasmid stability without StbE. [Cellular processes, Toxin production and resistance, Mobile and extrachromosomal element functions, Other] Pssm-ID: 211740 Cd Length: 88 Bit Score: 51.16 E-value: 4.82e-10
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ParE_toxin | pfam05016 | ParE toxin of type II toxin-antitoxin system, parDE; ParE is the toxin family of a type II ... |
5-83 | 1.55e-08 | |||
ParE toxin of type II toxin-antitoxin system, parDE; ParE is the toxin family of a type II toxin-antitoxin family. It is toxic towards DNA gyrase, but is neutralized by the antitoxin ParD. The family also encompasses RelE/ParE described in. Pssm-ID: 398610 [Multi-domain] Cd Length: 91 Bit Score: 47.42 E-value: 1.55e-08
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Name | Accession | Description | Interval | E-value | |||
RelE | COG2026 | mRNA-degrading endonuclease RelE, toxin component of the RelBE toxin-antitoxin system [Defense ... |
2-87 | 4.63e-20 | |||
mRNA-degrading endonuclease RelE, toxin component of the RelBE toxin-antitoxin system [Defense mechanisms]; Pssm-ID: 441629 Cd Length: 85 Bit Score: 76.78 E-value: 4.63e-20
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RelE_StbE | TIGR02385 | addiction module toxin, RelE/StbE family; Plasmids may be maintained stably in bacterial ... |
4-87 | 4.82e-10 | |||
addiction module toxin, RelE/StbE family; Plasmids may be maintained stably in bacterial populations through the action of addiction modules, in which a toxin and antidote are encoded in a cassette on the plasmid. In any daughter cell that lacks the plasmid, the toxin persists and is lethal after the antidote protein is depleted. Toxin/antitoxin pairs are also found on main chromosomes, and likely represent selfish DNA. Sequences in the seed for this alignment all are found adjacent to RelB/DinJ family antitoxin genes (TIGR02384), as are most genes found by the resulting model. StbE from Morganella morganii plasmid R485 shows typical behaviour for an addiction module toxin. It cannot be cloned without its partner (the antitoxin), whereas its partner cannot confer plasmid stability without StbE. [Cellular processes, Toxin production and resistance, Mobile and extrachromosomal element functions, Other] Pssm-ID: 211740 Cd Length: 88 Bit Score: 51.16 E-value: 4.82e-10
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ParE_toxin | pfam05016 | ParE toxin of type II toxin-antitoxin system, parDE; ParE is the toxin family of a type II ... |
5-83 | 1.55e-08 | |||
ParE toxin of type II toxin-antitoxin system, parDE; ParE is the toxin family of a type II toxin-antitoxin family. It is toxic towards DNA gyrase, but is neutralized by the antitoxin ParD. The family also encompasses RelE/ParE described in. Pssm-ID: 398610 [Multi-domain] Cd Length: 91 Bit Score: 47.42 E-value: 1.55e-08
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Blast search parameters | ||||
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