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Conserved domains on  [gi|90111243|ref|NP_415812|]
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putrescine:H(+) symporter PuuP [Escherichia coli str. K-12 substr. MG1655]

Protein Classification

APC family permease( domain architecture ID 11425014)

APC (amino acid/polyamine/organocation) family permease is involved in the uptake of a specific amino acid and/or polyamine substrate with the concomitant import of a proton

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
PotE COG0531
Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];
11-448 1.76e-85

Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];


:

Pssm-ID: 440297 [Multi-domain]  Cd Length: 438  Bit Score: 269.07  E-value: 1.76e-85
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111243  11 AQPGKTRLRKSLKLWQVVMMGLAYLTPMTVFDTFGIVSGISDGHVPASYLLALAGVLFTAISYGKLVRQFPEAGSAYTYA 90
Cdd:COG0531   2 SRGESSELKRKLGLFDLVALGVGAIIGAGIFVLPGLAAGLAGPAAILAWLIAGLLALLVALSYAELASAFPRAGGAYTYA 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111243  91 QKSINPHVGFMVGWSSLLDYLFLPMINVLLAKIYLSALFPEVPPWVWVVTFVAILTAANLKSVNLVANFNTLFVLVQISI 170
Cdd:COG0531  82 RRALGPLLGFLAGWALLLSYVLAVAAVAVAFGGYLSSLFPAGGSVLIALVLILLLTLLNLRGVKESAKVNNILTVLKLLV 161
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111243 171 MVVFIFLVVQGLHKGegvgtvwSLQPFISENAHLIPIITGATIVCFSFLGFDAVTTLSEETPDAARVIPKAIFLTAVYGG 250
Cdd:COG0531 162 LLLFIVVGLFAFDPA-------NFTPFLPAGGGLSGVLAALALAFFAFTGFEAIANLAEEAKNPKRNIPRAIILSLLIVG 234
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111243 251 VIFIAASFFMQLFFPDiSRFKDPDAALPEIALYVGGKLFQSIFLCTTFVNTLASGLASHASVSRLLYVMGRDNVFPeRVF 330
Cdd:COG0531 235 VLYILVSLALTGVVPY-DELAASGAPLADAAEAVFGPWGAILIALGALLSLLGALNASILGASRLLYAMARDGLLP-KVF 312
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111243 331 GYVHPKWRTPALNVIMVGIVALSALFF---DLVTATALINFGALVAFTFVNLSVFNHFWRRKGMNKSWKdhFHYLLMPLV 407
Cdd:COG0531 313 AKVHPRFGTPVNAILLTGVIALLLLLLgaaSFTALASLASVGVLLAYLLVALAVIVLRRRRPDLPRPFR--VPLPLIPIL 390
                       410       420       430       440
                ....*....|....*....|....*....|....*....|.
gi 90111243 408 GALTVGVLWVNLESTSLTLGLVWASLGGAYLWYLIRRYRKV 448
Cdd:COG0531 391 GILLCLFLLYLLGPGALLIGLVLLAIGLLLYLLYRRRHPKL 431
 
Name Accession Description Interval E-value
PotE COG0531
Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];
11-448 1.76e-85

Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];


Pssm-ID: 440297 [Multi-domain]  Cd Length: 438  Bit Score: 269.07  E-value: 1.76e-85
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111243  11 AQPGKTRLRKSLKLWQVVMMGLAYLTPMTVFDTFGIVSGISDGHVPASYLLALAGVLFTAISYGKLVRQFPEAGSAYTYA 90
Cdd:COG0531   2 SRGESSELKRKLGLFDLVALGVGAIIGAGIFVLPGLAAGLAGPAAILAWLIAGLLALLVALSYAELASAFPRAGGAYTYA 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111243  91 QKSINPHVGFMVGWSSLLDYLFLPMINVLLAKIYLSALFPEVPPWVWVVTFVAILTAANLKSVNLVANFNTLFVLVQISI 170
Cdd:COG0531  82 RRALGPLLGFLAGWALLLSYVLAVAAVAVAFGGYLSSLFPAGGSVLIALVLILLLTLLNLRGVKESAKVNNILTVLKLLV 161
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111243 171 MVVFIFLVVQGLHKGegvgtvwSLQPFISENAHLIPIITGATIVCFSFLGFDAVTTLSEETPDAARVIPKAIFLTAVYGG 250
Cdd:COG0531 162 LLLFIVVGLFAFDPA-------NFTPFLPAGGGLSGVLAALALAFFAFTGFEAIANLAEEAKNPKRNIPRAIILSLLIVG 234
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111243 251 VIFIAASFFMQLFFPDiSRFKDPDAALPEIALYVGGKLFQSIFLCTTFVNTLASGLASHASVSRLLYVMGRDNVFPeRVF 330
Cdd:COG0531 235 VLYILVSLALTGVVPY-DELAASGAPLADAAEAVFGPWGAILIALGALLSLLGALNASILGASRLLYAMARDGLLP-KVF 312
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111243 331 GYVHPKWRTPALNVIMVGIVALSALFF---DLVTATALINFGALVAFTFVNLSVFNHFWRRKGMNKSWKdhFHYLLMPLV 407
Cdd:COG0531 313 AKVHPRFGTPVNAILLTGVIALLLLLLgaaSFTALASLASVGVLLAYLLVALAVIVLRRRRPDLPRPFR--VPLPLIPIL 390
                       410       420       430       440
                ....*....|....*....|....*....|....*....|.
gi 90111243 408 GALTVGVLWVNLESTSLTLGLVWASLGGAYLWYLIRRYRKV 448
Cdd:COG0531 391 GILLCLFLLYLLGPGALLIGLVLLAIGLLLYLLYRRRHPKL 431
2A0306 TIGR00909
amino acid transporter; [Transport and binding proteins, Amino acids, peptides and amines]
18-434 1.12e-29

amino acid transporter; [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 129987 [Multi-domain]  Cd Length: 429  Bit Score: 120.24  E-value: 1.12e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111243    18 LRKSLKLWQVVMMGLAYLTPMTVFDTFGIVSGISDGHVPASYLLALAGVLFTAISYGKLVRQFPEAGSAYTYAQKSINPH 97
Cdd:TIGR00909   1 LSRELGLFDLTMLGIGAMIGTGIFVVTGIAAGKAGPAVILSFVLAGLTALFIALVYAELAAMLPVAGSPYTYAYEAMGEL 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111243    98 VGFMVGWSSLLDYL----------------FLPMINVLLAKIYLSALFPEVPPWVWVVTFVAILTAANLKSVNLVANFNT 161
Cdd:TIGR00909  81 TAFIIGWSLWLEYGvavaavavgwggylqeFLPGVGLDLPAVLTAKPGNGGVFNLPALLIVLFLTYILYLGAKESGKVND 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111243   162 LFVLVQISIMVVFIFLVVQGLHKGegvgtvwSLQPFISENahLIPIITGATIVCFSFLGFDAVTTLSEETPDAARVIPKA 241
Cdd:TIGR00909 161 ILVVLKVAALLLFAALGAIHFASN-------NYTPFMPMG--FGGVGAATALVFFAFIGFEAISTAAEEVKNPERDIPKA 231
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111243   242 IFLTAVYGGVIFIAASFFMQLFFPdISRFKDPDAALPEIALYVGGKLFQSIFLCTTFVNTLASGLASHASVSRLLYVMGR 321
Cdd:TIGR00909 232 IILSLIVVTLLYVLVAAVILGAVP-WRQLAGSTAPLSLVGYDLGQGIGGLILTAGAVFSIASVMLAGIYGTSRVLFAMSR 310
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111243   322 DNVFPeRVFGYVHPKWRTPALNVIMVG-IVALSALFFDLVTATALINFGALVAFTFVNLSVFNHFWRRKGMNKSWKDHFH 400
Cdd:TIGR00909 311 DGLLP-GSLSKVHPKTGTPHMSIIIFSlTAALLASLVPLEGLAELTSIGTLIAFAAVNVAVIILRRRRPDIQRAFRCPLV 389
                         410       420       430
                  ....*....|....*....|....*....|....
gi 90111243   401 YLLMPLVGALTVgVLWVNLESTSLTLGLVWASLG 434
Cdd:TIGR00909 390 PVLPVLVVSYCI-YLLLNLGPGTTVWFLVWMLLG 422
AA_permease pfam00324
Amino acid permease;
27-382 4.40e-28

Amino acid permease;


Pssm-ID: 366028 [Multi-domain]  Cd Length: 467  Bit Score: 115.88  E-value: 4.40e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111243    27 VVMMGLAYLTPMTVFdtFGIVSGISDG---HVPASYLLALAGVLFTAISYGKLVRQFPEAGSAYTYAQKSINPHVGFMVG 103
Cdd:pfam00324   2 VQMIALGGVIGTGLF--VGSGSVLGQAgpaGALLGYLISGVVIFLVMLSLGEISTNGPVSGGFYTYASRFLGPSLGFATG 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111243   104 WSSLLDYLFLPMINVLLAKIYLS--ALFPEVP-PWVWVVTFVAILTAANLKSVNLVANFNTLFVLVQISIMVVFIFLVVQ 180
Cdd:pfam00324  80 WNYWLSWITVLALELTAASILIQfwELVPDIPyLWVWGAVFLVLLTIINLVGVKWYGEAEFWFALIKIIAIIGFIIVGII 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111243   181 GLHKGEG--------VGTVWSLQPFISENAHliPIITGATIVCFSFLGFDAVTTLSEETPDAARVIPKAIFLTAVYGGVI 252
Cdd:pfam00324 160 LLSGGNPndgaifryLGDNGGKNNFPPGFGK--GFISVFVIAFFAFTGIELVGIAAGEVKNPEKSIPKAILQVIWRITIF 237
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111243   253 FIAASFFMQLFFP--DISRFKDPDAALPEIALY---VGGKLFQSIFLCTTFVNTLASGLASHASVSRLLYVMGRDNVFPe 327
Cdd:pfam00324 238 YILSLLAIGLLVPwnDPGLLNDSASAASPFVIFfkfLGISGLAPLINAVILTAALSAANSSLYSGSRMLYSLARDGLAP- 316
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 90111243   328 RVFGYVhPKWRTPALNVIMVGIVALSALFFDLVTaTALINFGALVAFTFVNLSVF 382
Cdd:pfam00324 317 KFLKKV-DKRGVPLRAILVSMVISLLALLLASLN-PAIVFNFLLAISGLSGLIVW 369
PRK10836 PRK10836
lysine transporter; Provisional
12-242 3.18e-15

lysine transporter; Provisional


Pssm-ID: 182767  Cd Length: 489  Bit Score: 77.55  E-value: 3.18e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111243   12 QPGKTRLRKSLKLWQVVMMGLAYLTPMTVFDTFG-IVSGISDGHVPASYLLALAGVLFTAISYGKLVRQFPEAGSAYTYA 90
Cdd:PRK10836   7 TTEAPGLRRELKARHLTMIAIGGSIGTGLFVASGaTISQAGPGGALLSYMLIGLMVYFLMTSLGELAAYMPVSGSFATYG 86
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111243   91 QKSINPHVGFMVGWSSLLDYLFLPMINVLLAKIYLSALFPEVPPWVWVVTFVAILTAANLKSVNLVANFNTLFVLVQISI 170
Cdd:PRK10836  87 QNYVEEGFGFALGWNYWYNWAVTIAVDLVAAQLVMSWWFPDTPGWIWSALFLGVIFLLNYISVRGFGEAEYWFSLIKVTT 166
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 90111243  171 MVVFI---FLVVQGLHKG-EGVG-TVWSL--QPFISENAHLIPIitgATIVCFSFLGFDAVTTLSEETPDAARVIPKAI 242
Cdd:PRK10836 167 VIVFIivgVLMIIGIFKGaEPAGwSNWTIgdAPFAGGFAAMIGV---AMIVGFSFQGTELIGIAAGESEDPAKNIPRAV 242
 
Name Accession Description Interval E-value
PotE COG0531
Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];
11-448 1.76e-85

Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];


Pssm-ID: 440297 [Multi-domain]  Cd Length: 438  Bit Score: 269.07  E-value: 1.76e-85
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111243  11 AQPGKTRLRKSLKLWQVVMMGLAYLTPMTVFDTFGIVSGISDGHVPASYLLALAGVLFTAISYGKLVRQFPEAGSAYTYA 90
Cdd:COG0531   2 SRGESSELKRKLGLFDLVALGVGAIIGAGIFVLPGLAAGLAGPAAILAWLIAGLLALLVALSYAELASAFPRAGGAYTYA 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111243  91 QKSINPHVGFMVGWSSLLDYLFLPMINVLLAKIYLSALFPEVPPWVWVVTFVAILTAANLKSVNLVANFNTLFVLVQISI 170
Cdd:COG0531  82 RRALGPLLGFLAGWALLLSYVLAVAAVAVAFGGYLSSLFPAGGSVLIALVLILLLTLLNLRGVKESAKVNNILTVLKLLV 161
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111243 171 MVVFIFLVVQGLHKGegvgtvwSLQPFISENAHLIPIITGATIVCFSFLGFDAVTTLSEETPDAARVIPKAIFLTAVYGG 250
Cdd:COG0531 162 LLLFIVVGLFAFDPA-------NFTPFLPAGGGLSGVLAALALAFFAFTGFEAIANLAEEAKNPKRNIPRAIILSLLIVG 234
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111243 251 VIFIAASFFMQLFFPDiSRFKDPDAALPEIALYVGGKLFQSIFLCTTFVNTLASGLASHASVSRLLYVMGRDNVFPeRVF 330
Cdd:COG0531 235 VLYILVSLALTGVVPY-DELAASGAPLADAAEAVFGPWGAILIALGALLSLLGALNASILGASRLLYAMARDGLLP-KVF 312
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111243 331 GYVHPKWRTPALNVIMVGIVALSALFF---DLVTATALINFGALVAFTFVNLSVFNHFWRRKGMNKSWKdhFHYLLMPLV 407
Cdd:COG0531 313 AKVHPRFGTPVNAILLTGVIALLLLLLgaaSFTALASLASVGVLLAYLLVALAVIVLRRRRPDLPRPFR--VPLPLIPIL 390
                       410       420       430       440
                ....*....|....*....|....*....|....*....|.
gi 90111243 408 GALTVGVLWVNLESTSLTLGLVWASLGGAYLWYLIRRYRKV 448
Cdd:COG0531 391 GILLCLFLLYLLGPGALLIGLVLLAIGLLLYLLYRRRHPKL 431
2A0306 TIGR00909
amino acid transporter; [Transport and binding proteins, Amino acids, peptides and amines]
18-434 1.12e-29

amino acid transporter; [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 129987 [Multi-domain]  Cd Length: 429  Bit Score: 120.24  E-value: 1.12e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111243    18 LRKSLKLWQVVMMGLAYLTPMTVFDTFGIVSGISDGHVPASYLLALAGVLFTAISYGKLVRQFPEAGSAYTYAQKSINPH 97
Cdd:TIGR00909   1 LSRELGLFDLTMLGIGAMIGTGIFVVTGIAAGKAGPAVILSFVLAGLTALFIALVYAELAAMLPVAGSPYTYAYEAMGEL 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111243    98 VGFMVGWSSLLDYL----------------FLPMINVLLAKIYLSALFPEVPPWVWVVTFVAILTAANLKSVNLVANFNT 161
Cdd:TIGR00909  81 TAFIIGWSLWLEYGvavaavavgwggylqeFLPGVGLDLPAVLTAKPGNGGVFNLPALLIVLFLTYILYLGAKESGKVND 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111243   162 LFVLVQISIMVVFIFLVVQGLHKGegvgtvwSLQPFISENahLIPIITGATIVCFSFLGFDAVTTLSEETPDAARVIPKA 241
Cdd:TIGR00909 161 ILVVLKVAALLLFAALGAIHFASN-------NYTPFMPMG--FGGVGAATALVFFAFIGFEAISTAAEEVKNPERDIPKA 231
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111243   242 IFLTAVYGGVIFIAASFFMQLFFPdISRFKDPDAALPEIALYVGGKLFQSIFLCTTFVNTLASGLASHASVSRLLYVMGR 321
Cdd:TIGR00909 232 IILSLIVVTLLYVLVAAVILGAVP-WRQLAGSTAPLSLVGYDLGQGIGGLILTAGAVFSIASVMLAGIYGTSRVLFAMSR 310
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111243   322 DNVFPeRVFGYVHPKWRTPALNVIMVG-IVALSALFFDLVTATALINFGALVAFTFVNLSVFNHFWRRKGMNKSWKDHFH 400
Cdd:TIGR00909 311 DGLLP-GSLSKVHPKTGTPHMSIIIFSlTAALLASLVPLEGLAELTSIGTLIAFAAVNVAVIILRRRRPDIQRAFRCPLV 389
                         410       420       430
                  ....*....|....*....|....*....|....
gi 90111243   401 YLLMPLVGALTVgVLWVNLESTSLTLGLVWASLG 434
Cdd:TIGR00909 390 PVLPVLVVSYCI-YLLLNLGPGTTVWFLVWMLLG 422
AA_permease pfam00324
Amino acid permease;
27-382 4.40e-28

Amino acid permease;


Pssm-ID: 366028 [Multi-domain]  Cd Length: 467  Bit Score: 115.88  E-value: 4.40e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111243    27 VVMMGLAYLTPMTVFdtFGIVSGISDG---HVPASYLLALAGVLFTAISYGKLVRQFPEAGSAYTYAQKSINPHVGFMVG 103
Cdd:pfam00324   2 VQMIALGGVIGTGLF--VGSGSVLGQAgpaGALLGYLISGVVIFLVMLSLGEISTNGPVSGGFYTYASRFLGPSLGFATG 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111243   104 WSSLLDYLFLPMINVLLAKIYLS--ALFPEVP-PWVWVVTFVAILTAANLKSVNLVANFNTLFVLVQISIMVVFIFLVVQ 180
Cdd:pfam00324  80 WNYWLSWITVLALELTAASILIQfwELVPDIPyLWVWGAVFLVLLTIINLVGVKWYGEAEFWFALIKIIAIIGFIIVGII 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111243   181 GLHKGEG--------VGTVWSLQPFISENAHliPIITGATIVCFSFLGFDAVTTLSEETPDAARVIPKAIFLTAVYGGVI 252
Cdd:pfam00324 160 LLSGGNPndgaifryLGDNGGKNNFPPGFGK--GFISVFVIAFFAFTGIELVGIAAGEVKNPEKSIPKAILQVIWRITIF 237
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111243   253 FIAASFFMQLFFP--DISRFKDPDAALPEIALY---VGGKLFQSIFLCTTFVNTLASGLASHASVSRLLYVMGRDNVFPe 327
Cdd:pfam00324 238 YILSLLAIGLLVPwnDPGLLNDSASAASPFVIFfkfLGISGLAPLINAVILTAALSAANSSLYSGSRMLYSLARDGLAP- 316
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 90111243   328 RVFGYVhPKWRTPALNVIMVGIVALSALFFDLVTaTALINFGALVAFTFVNLSVF 382
Cdd:pfam00324 317 KFLKKV-DKRGVPLRAILVSMVISLLALLLASLN-PAIVFNFLLAISGLSGLIVW 369
2A0303 TIGR00906
cationic amino acid transport permease; [Transport and binding proteins, Amino acids, peptides ...
16-381 1.68e-22

cationic amino acid transport permease; [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273330 [Multi-domain]  Cd Length: 557  Bit Score: 100.27  E-value: 1.68e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111243    16 TRLRKSLKLWQVVMMGLAYLTPMTVFDTFGIVSGISDG-HVPASYLLALAGVLFTAISYGKLVRQFPEAGSAYTYAQKSI 94
Cdd:TIGR00906  24 SKMKRCLTTWDLMALGIGSTIGAGIYVLTGEVARNDSGpAIVLSFLISGLAAVLSGFCYAEFGARVPKAGSAYLYSYVTV 103
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111243    95 NPHVGFMVGWSSLLDYL-------------FLPMINVLLA---KIYLSALFPEVP--PWVWVVTFVAILTAANLKSVNLV 156
Cdd:TIGR00906 104 GELWAFITGWNLILEYVigtaavarswsayFDELLNKQIGqfrRTYFKLNYDGLAeyPDFFAVCLILLLAVLLSFGVKES 183
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111243   157 ANFNTLFVLVQisiMVVFIFLVVQGLHKGEgvGTVWSLQpFISENAHLIP-----IITGATIVCFSFLGFDAVTTLSEET 231
Cdd:TIGR00906 184 AWVNKIFTAIN---ILVLLFVIIAGFTKAD--VANWSIT-EEKGAGGFMPygftgVLSGAATCFFAFIGFDAIATTGEEV 257
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111243   232 PDAARVIPKAIFLTAVYGGVIFIAASFFMQLFFPdiSRFKDPDAALPEIALYVGGKLFQSIFLCTTFVNTLASGLASHAS 311
Cdd:TIGR00906 258 KNPQRAIPIGIVTSLLVCFVAYFLMSAALTLMMP--YYLLDPDAPFPVAFEYVGWDPAKYIVAVGALCGMSTSLLGGMFP 335
                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 90111243   312 VSRLLYVMGRDNVFPeRVFGYVHPKWRTP-ALNVIMVGIVALSALFFDLVTATALINFGALVAFTFVNLSV 381
Cdd:TIGR00906 336 LPRVIYAMARDGLLF-KWLAQINSKTKTPiNATVVSGAIAALMAFLFDLKALVDLLSIGTLLAYSLVAACV 405
AA_permease_2 pfam13520
Amino acid permease;
60-396 7.10e-20

Amino acid permease;


Pssm-ID: 404414 [Multi-domain]  Cd Length: 427  Bit Score: 91.60  E-value: 7.10e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111243    60 LLALAGVLFTAISYGKLVRQFPEAGSAYTYAQKSINPHVGFMVGWSSLLDY-LFLPMINVLLAKIYLSALFPEVPPWVWV 138
Cdd:pfam13520  38 IAAIIFSLAVGLVYAELSSALPRSGGIYVYLENAFGKFVAFLAGWSNWFAYvLGLASSASVAASYLLSALGPDLVPTTWL 117
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111243   139 VTFVAIL-----TAANLKSVNLVANFNTlfVLVQISIMVVFIFLVVQGLHKGEGVGTVWSLQPFISENAHLIP-IITGAT 212
Cdd:pfam13520 118 TYGIAIAiliifAIINIRGVRESAKIQN--ILGILKLLLPLILIIILGLVTADGGGFNLLSGEWHTFFPDGWPgVFAGFL 195
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111243   213 IVCFSFLGFDAVTTLSEETPDaaRVIPKAIFLTAVYGGVIFIAASFFMQLFFPDISRFKDPDAALPEIALY--VGGKLFQ 290
Cdd:pfam13520 196 GVLWSFTGFESAANVSEEVKK--RNVPKAIFIGVIIVGVLYILVNIAFFGVVPDDEIALSSGLGQVAALLFqaVGGKWGA 273
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111243   291 SIFLCTTFVNTLASGLASHASVSRLLYVMGRDNVFPE-RVFGYVHpKWRTPALNVIMVGIVALSALFF------DLVTAT 363
Cdd:pfam13520 274 IIVVILLALSLLGAVNTAIVGASRLLYALARDGVLPFsRFFAKVN-KFGSPIRAIILTAILSLILLLLfllspaAYNALL 352
                         330       340       350
                  ....*....|....*....|....*....|...
gi 90111243   364 ALINFGALVAFTFVNLSVFNHFWRRKGMNKSWK 396
Cdd:pfam13520 353 SLSAYGYLLSYLLPIIGLLILRKKRPDLGRIPG 385
AnsP COG1113
L-asparagine transporter or related permease [Amino acid transport and metabolism];
8-242 1.77e-18

L-asparagine transporter or related permease [Amino acid transport and metabolism];


Pssm-ID: 440730 [Multi-domain]  Cd Length: 458  Bit Score: 87.48  E-value: 1.77e-18
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111243   8 NIAAQPGKTRLRKSLKLWQVVMMGLAyltpmTVFDT---FGIVSGISD-GhvPA---SYLLALAGVLFTAISYGKLVRQF 80
Cdd:COG1113   3 TSAAASEEEGLKRGLKNRHIQMIALG-----GAIGTglfLGSGKAIALaG--PAvllSYLIAGLIVFLVMRALGEMAVAN 75
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111243  81 PEAGSAYTYAQKSINPHVGFMVGWSSLLDYLFLPMINVLLAKIYLSALFPEVPPWVWVVTFVAILTAANLKSVNLVANFN 160
Cdd:COG1113  76 PVSGSFSDYAREYLGPWAGFVTGWLYWFFWVLVGMAEATAVGIYLQFWFPDVPQWVWALVFLVLLTAINLLSVKLFGEFE 155
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111243 161 TLFVLVQISIMVVFI----FLVVQGLHKGE----GVGTVWSLQPFIsenAH-LIPIITGATIVCFSFLGFDAVTTLSEET 231
Cdd:COG1113 156 FWFALIKVVAIVAFIvvglLLIFFGFGLPGgppaGLSNLWDHGGFF---PNgIGGVLAALQIVVFAFGGIELVGIAAAEA 232
                       250
                ....*....|.
gi 90111243 232 PDAARVIPKAI 242
Cdd:COG1113 233 KDPEKTIPKAI 243
LysP COG0833
Amino acid permease [Amino acid transport and metabolism];
58-374 7.35e-18

Amino acid permease [Amino acid transport and metabolism];


Pssm-ID: 440595 [Multi-domain]  Cd Length: 467  Bit Score: 85.61  E-value: 7.35e-18
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111243  58 SYLLALAGVLFTAISYGKLVRQFPEAGSAYTYAQKSINPHVGFMVGWSSLLDYLFLPMINVLLAKIYLSALFPEVPPWVW 137
Cdd:COG0833  51 AYLLGGLMVYFLMTSLGELAVAMPVSGSFQTYATRFIDPAFGFAVGWNYWLNWAITVAAELTAAGIIMQYWFPDVPVWIW 130
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111243 138 VVTFVAILTAANLKSVNLVANFNTLFVLVQISIMVVFI---FLVVQGLHKGEGVGtvwsLQPFISENA----HLIPIITG 210
Cdd:COG0833 131 SLLFLALIFLLNALSVKAFGESEFWFSLIKVITVIAFIivgLLMIFGIIGGHAPG----FSNFTTGDGpfpgGFLAILGV 206
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111243 211 ATIVCFSFLGFDAVTTLSEETPDAARVIPKAIFLTAVYGGVIFIAASFFMQLFFPdisrFKDPDAALPEIAL---YVGGK 287
Cdd:COG0833 207 MMIVGFSFQGTELIGIAAGESENPEKTIPKAIRQVFWRILLFYILAIFVIAALIP----YTDAGVAESPFTLvfeRAGIP 282
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111243 288 LFQSIFLCTTFVNTLASGLASHASVSRLLYVMGRDNVFPeRVFGYVHPKwRTPALNVIMVGIVALSALFFDLVTA----T 363
Cdd:COG0833 283 YAADIMNAVILTAVLSAGNSGLYASTRMLWSLAKEGMAP-KIFAKLNKR-GVPLNALLATMAVGLLALLSSFFGAgtvyL 360
                       330
                ....*....|.
gi 90111243 364 ALINFGALVAF 374
Cdd:COG0833 361 WLLSISGLTGF 371
PRK10836 PRK10836
lysine transporter; Provisional
12-242 3.18e-15

lysine transporter; Provisional


Pssm-ID: 182767  Cd Length: 489  Bit Score: 77.55  E-value: 3.18e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111243   12 QPGKTRLRKSLKLWQVVMMGLAYLTPMTVFDTFG-IVSGISDGHVPASYLLALAGVLFTAISYGKLVRQFPEAGSAYTYA 90
Cdd:PRK10836   7 TTEAPGLRRELKARHLTMIAIGGSIGTGLFVASGaTISQAGPGGALLSYMLIGLMVYFLMTSLGELAAYMPVSGSFATYG 86
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111243   91 QKSINPHVGFMVGWSSLLDYLFLPMINVLLAKIYLSALFPEVPPWVWVVTFVAILTAANLKSVNLVANFNTLFVLVQISI 170
Cdd:PRK10836  87 QNYVEEGFGFALGWNYWYNWAVTIAVDLVAAQLVMSWWFPDTPGWIWSALFLGVIFLLNYISVRGFGEAEYWFSLIKVTT 166
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 90111243  171 MVVFI---FLVVQGLHKG-EGVG-TVWSL--QPFISENAHLIPIitgATIVCFSFLGFDAVTTLSEETPDAARVIPKAI 242
Cdd:PRK10836 167 VIVFIivgVLMIIGIFKGaEPAGwSNWTIgdAPFAGGFAAMIGV---AMIVGFSFQGTELIGIAAGESEDPAKNIPRAV 242
PRK10249 PRK10249
phenylalanine transporter; Provisional
62-242 6.11e-15

phenylalanine transporter; Provisional


Pssm-ID: 236667  Cd Length: 458  Bit Score: 76.56  E-value: 6.11e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111243   62 ALAGVLFTAI--SYGKLVRQFPEAGSAYTYAQKSINPHVGFMVGWSSLLDYLFLPMINVLLAKIYLSALFPEVPPWVWVV 139
Cdd:PRK10249  61 GVAGIIAFLImrQLGEMVVEEPVSGSFAHFAYKYWGPFAGFLSGWNYWVMFVLVGMAELTAAGIYMQYWFPDVPTWIWAA 140
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111243  140 TFVAILTAANLKSVNLVANFNTLFVLVQISI---MVVFIFLVVQGLHKGE--GVGTVWSLQPFISENAHliPIITGATIV 214
Cdd:PRK10249 141 AFFIIINAVNLVNVRLYGETEFWFALIKVLAiigMIGFGLWLLFSGHGGEkaSIDNLWRYGGFFATGWN--GLILSLAVI 218
                        170       180
                 ....*....|....*....|....*...
gi 90111243  215 CFSFLGFDAVTTLSEETPDAARVIPKAI 242
Cdd:PRK10249 219 MFSFGGLELIGITAAEARDPEKSIPKAV 246
2A0304 TIGR00907
amino acid permease (GABA permease); [Transport and binding proteins, Amino acids, peptides ...
9-374 5.46e-13

amino acid permease (GABA permease); [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273331 [Multi-domain]  Cd Length: 482  Bit Score: 70.55  E-value: 5.46e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111243     9 IAAQPGKTRLRKSLKLWQVVMMGLAYLTPMTVFDTFGIVSGISDGHVPASYLLALAGV--LFTAISYGKLVRQFPEAGSA 86
Cdd:TIGR00907   1 LVALGYKPELKREFSLWSIFGFAFSISNSWTGISTTYNYGLSSGGAMSIVWGWIIAGAgsICIALSLAELSSAYPTSGGQ 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111243    87 YTY----AQKSINPHVGFMVGWSSLLDYLF------LPMINVLLAKIYLSALFPEVPPWVWVV--------TFVAILTAA 148
Cdd:TIGR00907  81 YFWsaklAPPRQMPFASWMTGWFNLAGQVAgtastdLSVAQLILGIVSLTTPGREYIPTRWHIfgimigihLIHALINSL 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111243   149 NLKSVNLVANFNTLFVLvqISIMVVFIFLVVQGLHKGEGVGTVWSlqPFISENAHLIPI----ITGATIVCFSFLGFDAV 224
Cdd:TIGR00907 161 PTKWLPRITSSAAYWSL--LGFLTICITLLACKSPKFNDGKFVFT--NFNNSTGGWKPGgfafLLGLLNPAWSMTGYDGT 236
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111243   225 TTLSEETPDAARVIPKAIF----LTAVYGGVIFIAASFFMQlffpdisrfkDPDAALPEIALYVGGKLFQS--------- 291
Cdd:TIGR00907 237 AHMAEEIENPEVVGPRAIIgavaIGIVTGFCFNIVLFFSMG----------DIDSLISSTTGQPIAQIFYNalgnkagai 306
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111243   292 IFLCTTFVNTLASGLASHASVSRLLYVMGRDNVFP-ERVFGYVHPKWRTPalnvimVGIVALSALFfdlVTATALINFGA 370
Cdd:TIGR00907 307 FLLCLILVTSFFCAITCMTANSRMIYAFSRDGGLPfSPLWSRVNPRTQVP------LNAVWLSAVW---IILIGLLGLGS 377

                  ....
gi 90111243   371 LVAF 374
Cdd:TIGR00907 378 STAF 381
proY PRK10580
putative proline-specific permease; Provisional
81-259 6.99e-13

putative proline-specific permease; Provisional


Pssm-ID: 182566 [Multi-domain]  Cd Length: 457  Bit Score: 70.23  E-value: 6.99e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111243   81 PEAGSAYTYAQKSINPHVGFMVGWSSLLDYLFLPMINVLLAKIYLSALFPEVPPWVWVVTFVAILTAANLKSVNLVANFN 160
Cdd:PRK10580  70 PAASSFSRYAQENLGPLAGYITGWTYCFEILIVAIADVTAFGIYMGVWFPTVPHWIWVLSVVLIICAVNLMSVKVFGELE 149
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111243  161 TLFVLVQISIMVVFIF----LVVQGLHKG---EGVGTVWSLQPFISENahLIPIITGATIVCFSFLGFDAVTTLSEETPD 233
Cdd:PRK10580 150 FWFSFFKVATIIIMIVagigIIIWGIGNGgqpTGIHNLWSNGGFFSNG--WLGMVMSLQMVMFAYGGIEIIGITAGEAKD 227
                        170       180       190
                 ....*....|....*....|....*....|.
gi 90111243  234 AARVIPKAI-----FLTAVYGGVIFIAASFF 259
Cdd:PRK10580 228 PEKSIPRAInsvpmRILVFYVGTLFVIMSIY 258
2A0310 TIGR00913
amino acid permease (yeast); [Transport and binding proteins, Amino acids, peptides and amines]
58-375 4.59e-11

amino acid permease (yeast); [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273334  Cd Length: 478  Bit Score: 64.61  E-value: 4.59e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111243    58 SYLLALAGVLFTAISYGKLVRQFPEAGSAYT-YAQKSINPHVGFMVGWSSLLDYLFLPMINVLLAKIYLSALFPEVPPWV 136
Cdd:TIGR00913  41 GYAIMGSIIYCVMQSLGEMATFYPVVSGSFAtYASRFVDPAFGFAVGWNYWLQWLIVLPLELVTASMTIQYWTDKVNPAV 120
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111243   137 WVVTFVAILTAANLKSVNLVANFNTLFVLVQISIMVVFIFL----VVQGLHKGEGVGTVWSLQPFISENAHLIPIITGAT 212
Cdd:TIGR00913 121 WIAIFYVFIVIINLFGVKGYGEAEFWFSSIKILAIIGFIILsiilNCGGGPNHGYIGFRYWHDPGAFAGGTIGGRFKGVC 200
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111243   213 IV----CFSFLGFDAVTTLSEETPDAARVIPKAIFLTAVYGGVIFIAASFFMQLFFP-------DISRFKDPDAALPEIA 281
Cdd:TIGR00913 201 SVfvtaAFSFGGTELVALTAGEAANPRKSIPRAAKRTFWRILVFYILTLFLIGFLVPyndprllSSSSSSDSAASPFVIA 280
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111243   282 LYVGG-KLFQSIFLCTTFVNTLASGLASHASVSRLLYVMGRDNVFPeRVFGYVHpKWRTPALNVIMVGivALSALFFDLV 360
Cdd:TIGR00913 281 IQNHGiKVLPHIFNAVILISVLSAANSSLYASSRTLYALAHQGLAP-KIFAYVD-RRGVPYVAVIVSS--LFGLLAFLAV 356
                         330
                  ....*....|....*
gi 90111243   361 TATALINFGALVAFT 375
Cdd:TIGR00913 357 SKKEAEVFTWLLNIS 371
frlA PRK11357
amino acid permease;
14-435 1.82e-10

amino acid permease;


Pssm-ID: 183096 [Multi-domain]  Cd Length: 445  Bit Score: 62.57  E-value: 1.82e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111243   14 GKTRLRKSLKLWQVVMMGLAYLTPMTVFDTFGIVSGISDghvpASYLLALAGVLFTAIS------YGKLVRQFPEAGSAY 87
Cdd:PRK11357   2 GSQELQRKLGFWAVLAIAVGTTVGSGIFVSVGEVAKAAG----TPWLTVLAFVIGGLIVipqmcvYAELSTAYPENGADY 77
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111243   88 TYAQKSINPHVGFMVGWSSLL--DYLFLPMINVLLAKiYLSALFPEVPPWVWVVT--FVAILTAANLKSVNLVANFNTLF 163
Cdd:PRK11357  78 VYLKNAGSRPLAFLSGWASFWanDAPSLSIMALAIVS-NLGFLTPIDPLLGKFIAagLIIAFMLLHLRSVEGGAAFQTLI 156
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111243  164 VLVQIsimVVFIFLVVQGLHKGEGVGTVWSLQPFISENAHLIPIITGATIVCFSFLGFDAVTTLSEETPDAARVIPKAIF 243
Cdd:PRK11357 157 TIAKI---IPFTIVIGLGIFWFKAENFAAPTTTAIGATGSFMALLAGISATSWSYTGMASICYMTGEIKNPGKTMPRALI 233
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111243  244 LTAVYGGVIFIAASFFMQLFFPdISRFKDPDAALPEIALYVGG-----KLFQSIFLCTTFVNTLASGLASHAsvsRLLYV 318
Cdd:PRK11357 234 GSCLLVLVLYTLLALVISGLMP-FDKLANSETPISDALTWIPAlgstaGIFVAITAMIVILGSLSSCVMYQP---RLEYA 309
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111243  319 MGRDNVFpERVFGYVHPKWRTPALNVIMVGIVALSALFfdLVTATALINFGALVAFTFVNLSVFNHFWRRKgmnkswKDH 398
Cdd:PRK11357 310 MAKDNLF-FKCFGHVHPKYNTPDVSIILQGALGIFFIF--VSDLTSLLGYFTLVMCFKNTLTFGSIIWCRK------RDD 380
                        410       420       430       440
                 ....*....|....*....|....*....|....*....|
gi 90111243  399 FHYLLMPLVGALTVGVLWVnlesTSLTL---GLVWASLGG 435
Cdd:PRK11357 381 YKPLWRTPAFGLMTTLAIA----SSLILvasTFVWAPIPG 416
PRK11387 PRK11387
S-methylmethionine permease;
11-377 3.04e-10

S-methylmethionine permease;


Pssm-ID: 236904  Cd Length: 471  Bit Score: 62.18  E-value: 3.04e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111243   11 AQPGKTRLRKSLKLWQVVMMGLAYLTPMTVF-DTFGIVSGISDGHVPASYLLALAGVLFTAISYGKLVRQFPEAGSAYTY 89
Cdd:PRK11387   5 TSQQAGQFKRTMKVRHLVMLSLGGVIGTGLFfNTGYIISTTGAAGTLLAYLIGALVVYLVMQCLGELSVAMPETGAFHVY 84
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111243   90 AQKSINPHVGFMVGWSSLLDYLFLPMINVLLAKIYLSALFPEVPPWVWVVTFVAILTAANLKSVNLVANFNTLFVLVQIS 169
Cdd:PRK11387  85 AARYLGPATGYTVAWLYWLTWTVALGSSLTAAGFCMQYWFPQVPVWPWCLLFCALIFGLNVVSTRFFAEGEFWFSLIKVV 164
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111243  170 IMVVFIFL----VVQGLHKGEGvgtvwSLQPFISE-------NAHLIPIITGATIVCFSFLGFDAVTTLSEETPDAARVI 238
Cdd:PRK11387 165 TILAFIVLggaaIFGFIPMQDG-----SPAPGLRNltaegwfPHGGLPILMTMVAVNFAFSGTELIGIAAGETENPAKVI 239
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111243  239 PKAIFLTAVYGGVIFIAASFFMQLFFP--DISRFKDPDA-ALPEIALYVGGKLFQSIFLcTTFVNTLASGLASHAsvsRL 315
Cdd:PRK11387 240 PVAIRTTIARLVIFFVGTVLVLAALIPmqQAGVEKSPFVlVFEKVGIPYAADIFNFVIL-TAILSAANSGLYASG---RM 315
                        330       340       350       360       370       380
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 90111243  316 LYVMGRDNVFPERVFGYVHPKWRTPALNVIMVGivALSALFFDLVTA-TALINFGALVAFTFV 377
Cdd:PRK11387 316 LWSLSNEGTLPACFARLTKRGIPLTALSVSMLG--GLLALFSSVVAPdTVFVALSAISGFAVV 376
PRK10238 PRK10238
aromatic amino acid transporter AroP;
74-241 7.82e-10

aromatic amino acid transporter AroP;


Pssm-ID: 182324 [Multi-domain]  Cd Length: 456  Bit Score: 60.74  E-value: 7.82e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111243   74 GKLVRQFPEAGSAYTYAQKSINPHVGFMVGWSSLLDYLFLPMINVLLAKIYLSALFPEVPPWVWVVTFVAILTAANLKSV 153
Cdd:PRK10238  66 GEMVVEEPVAGSFSHFAYKYWGSFAGFASGWNYWVLYVLVAMAELTAVGKYIQFWYPEIPTWVSAAVFFVVINAINLTNV 145
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111243  154 NLVANFNTLFVLVQISIMVVFIFLVVQGLHKGEG-----VGTVWSLQPFISENahLIPIITGATIVCFSFLGFDAVTTLS 228
Cdd:PRK10238 146 KVFGEMEFWFAIIKVIAVVAMIIFGGWLLFSGNGgpqatVSNLWDQGGFLPHG--FTGLVMMMAIIMFSFGGLELVGITA 223
                        170
                 ....*....|...
gi 90111243  229 EETPDAARVIPKA 241
Cdd:PRK10238 224 AEADNPEQSIPKA 236
2A0308 TIGR00911
L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and ...
67-396 1.36e-09

L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273332 [Multi-domain]  Cd Length: 501  Bit Score: 60.15  E-value: 1.36e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111243    67 LFTAISYGKLVRQFPEAGSAYTYAQKSINPHVGFMVGWSSLldYLFLP----MINVLLAKIYLSALFPEVPPWVWVVTFV 142
Cdd:TIGR00911  91 IVGALVYAELGTTIPKSGGEYNYILEVFGPLLAFLRLWIEL--LVIRPgsqaVNALNFAIYILTPVFPDCEVPEWAIRLV 168
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111243   143 A-----ILTAANLKSVNLVANFNTLFVLVQISIMVVFIFLVVQGLHKGEgvgtVWSLQP---FISENAHLIPIITGATIV 214
Cdd:TIGR00911 169 AvlcvlLLTLVNCLSVKWATRVQDIFTACKLLALLLIIITGWVQLGKGG----VESLNPknaFEGTETSAGGIVLAFYSG 244
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111243   215 CFSFLGFDAVTTLSEETPDAARVIPKAIFLTAVYGGVIFIAASFfmqLFFPDISrfkdPDAALPEIALYV--GGKLF-QS 291
Cdd:TIGR00911 245 IWAYGGWNYLNFVTEEVKNPYRTLPIAIIISMPIVTFIYVLTNI---AYFTVLS----PEELLASLAVAVdfGERLLgVM 317
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111243   292 IFLCTTFV--NTLASGLASHASVSRLLYVMGRDNVFPERVFgYVHPKWRTPALNVIMVGIVALSALFFDlvTATALINFG 369
Cdd:TIGR00911 318 SWAMPALVglSCFGSVNGSLFSSSRLFFVGGREGHLPSLLS-MIHVKRLTPLPSLLIVCTLTLLMLFSG--DIYSLINLI 394
                         330       340       350
                  ....*....|....*....|....*....|
gi 90111243   370 ALVAFTFVNLSVFNHFW---RRKGMNKSWK 396
Cdd:TIGR00911 395 SFANWLFNALAVAGLLWlryKRPEMNRPIK 424
PRK15049 PRK15049
L-asparagine permease;
59-265 2.33e-08

L-asparagine permease;


Pssm-ID: 185009  Cd Length: 499  Bit Score: 56.17  E-value: 2.33e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111243   59 YLLALAGVLFTAISYGKLVRQFPEAGSAYTYAQKSINPHVGFMVGWSSLLDYLFLPMINVLLAKIYLS--ALFPEVPPWV 136
Cdd:PRK15049  67 YLICGLFSFFILRALGELVLHRPSSGSFVSYAREFLGEKAAYVAGWMYFINWAMTGIVDITAVALYMHywGAFGGVPQWV 146
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111243  137 WVVTFVAILTAANLKSVNLVANFNTLFVLVQisIMVVFIFLVVQGLHKGEGVGTVWSLQPF--ISENA-----HLIPIIT 209
Cdd:PRK15049 147 FALAALTIVGTMNMIGVKWFAEMEFWFALIK--VLAIVTFLVVGTVFLGSGQPLDGNTTGFhlITDNGgffphGLLPALV 224
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 90111243  210 GATIVCFSFLGFDAVTTLSEETPDAARVIPKAIFLTAVYGGVIFIAASFFMQLFFP 265
Cdd:PRK15049 225 LIQGVVFAFASIEMVGTAAGECKDPQTMVPKAINSVIWRIGLFYVGSVVLLVMLLP 280
PRK10197 PRK10197
GABA permease;
58-233 9.73e-08

GABA permease;


Pssm-ID: 182297  Cd Length: 446  Bit Score: 54.24  E-value: 9.73e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111243   58 SYLLALAGVLFTAISYGKLVRQFPEAGSAYTYAQKSINPHVGFMVGWSSLLDYLFLPMINVLLAKIYLSALFPEVPPWVW 137
Cdd:PRK10197  30 AYLFAGLLVVMIMRMLAEMAVATPDTGSFSTYADKAIGRWAGYTIGWLYWWFWVLVIPLEANIAAMILHSWVPGIPIWLF 109
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111243  138 VVTFVAILTAANLKSVNLVANFNTLFVLVQISIMVVFIFL---VVQGLH---KGEGVGTVWSLQPFISENahLIPIITGA 211
Cdd:PRK10197 110 SLVITLALTGSNLLSVKNYGEFEFWLALCKVIAILAFIFLgavAISGFYpyaEVSGISRLWDSGGFMPNG--FGAVLSAM 187
                        170       180
                 ....*....|....*....|....
gi 90111243  212 TIVCFSFLGFDAVTTLSEE--TPD 233
Cdd:PRK10197 188 LITMFSFMGAEIVTIAAAEsdTPE 211
PRK11049 PRK11049
D-alanine/D-serine/glycine permease; Provisional
96-242 2.89e-07

D-alanine/D-serine/glycine permease; Provisional


Pssm-ID: 236830  Cd Length: 469  Bit Score: 52.81  E-value: 2.89e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111243   96 PHVGFMVGWSSLLDYLFLPMINVLLAKIYLSALFPEVPPWVWVVTFVAILTAANLKSVNLVANFNTLFVLVQISIMVVFI 175
Cdd:PRK11049  96 PWAGYFTGWTYWFCWVVTGIADVVAITAYAQFWFPDLSDWVASLAVVLLLLSLNLATVKMFGEMEFWFAMIKIVAIVALI 175
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 90111243  176 F--LVVQGLHKGEGVGTVWSLQPFISENAH----LIPIITGATIVCFSFLGFDAVTTLSEETPDAARVIPKAI 242
Cdd:PRK11049 176 VvgLVMVAMHFQSPTGVEASFAHLWNDGGMfpkgLSGFFAGFQIAVFAFVGIELVGTTAAETKDPEKSLPRAI 248
PRK10746 PRK10746
putative transport protein YifK; Provisional
58-175 5.28e-07

putative transport protein YifK; Provisional


Pssm-ID: 182694  Cd Length: 461  Bit Score: 51.74  E-value: 5.28e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111243   58 SYLLALAGVLFTAISYGKLVRQFPEAGSAYTYAQKSINPHVGFMVGWSSLLDYLFLPMINVLLAKIYLSALFPEVPPWVW 137
Cdd:PRK10746  48 AYIIAGLFVFFIMRSMGEMLFLEPVTGSFAVYAHRYMSPFFGYLTAWSYWFMWMAVGISEITAIGVYVQFWFPEMAQWIP 127
                         90       100       110
                 ....*....|....*....|....*....|....*...
gi 90111243  138 VVTFVAILTAANLKSVNLVANFNTLFVLVQISIMVVFI 175
Cdd:PRK10746 128 ALIAVALVALANLAAVRLYGEIEFWFAMIKVTTIIVMI 165
GerAB COG5902
Spore germination receptor GerABC, GerB subunit (amino acid transporter) [Cell cycle control, ...
25-264 5.79e-05

Spore germination receptor GerABC, GerB subunit (amino acid transporter) [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 444604  Cd Length: 365  Bit Score: 45.19  E-value: 5.79e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111243  25 WQVVMMGLAYLTPMTVFDTFGIVSGISDGHVPASYLLALAGVLFTAISYGKLVRQFPEAgSAYTYAQKSINPHVGFMVGW 104
Cdd:COG5902   9 RQLFFLIILTIIGVGILTLPRLLAKIAGQDAWISVLLAGLIGLLLALIIVKLLKRFPGK-TLVEISEKILGKWLGKLLGL 87
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111243 105 SSLLdYLFLPMINVL--LAKIYLSALFPEVPPWVWVVTFVAILTAANLKSVNLVANFNTLFVLVQISIMVVFIFLVVQGL 182
Cdd:COG5902  88 LYIL-YFLLIAALVLreFGEFIKTTLLPETPIWVIILLFLLVAVYAVRGGIEVIARVAEILFPLILILLLLLLLLSLPEI 166
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111243 183 HKGEgvgtvwsLQPFISENahLIPIITGATIVCFSFLGFDAVTTLSEETPDAARvIPKAIFLTAVYGGVIFIAASFFMQL 262
Cdd:COG5902 167 DFSN-------LLPVLENG--LKPILKGALPTSFPFGGFEILLMLYPYVKKKKK-AKKAALIGILISGLLLTLVVLVSIG 236

                ..
gi 90111243 263 FF 264
Cdd:COG5902 237 VF 238
2a30 TIGR00930
K-Cl cotransporter; [Transport and binding proteins, Other]
138-410 1.32e-04

K-Cl cotransporter; [Transport and binding proteins, Other]


Pssm-ID: 273347 [Multi-domain]  Cd Length: 953  Bit Score: 44.70  E-value: 1.32e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111243   138 VVTFVAILTAANLKSVNLVANFntLFVLVQISIMVVFIFlVVQGLHKGEGVG-TVWSLQPFiseNAHLIPIITGATIVCF 216
Cdd:TIGR00930 210 TVVVLLGISFAGMEWENKAQVL--FLVIVLLSILNIFVG-TIIPAFDKPAKGfFGLGNEIF---SENFIPGIPGPEGGFF 283
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111243   217 SFLG--FDAVT------TLSEETPDAARVIPK----AIFLTAVyggVIFIAASFFMQLFFPDISRFKDpDAALPEIALYV 284
Cdd:TIGR00930 284 SLFGifFPSVTgilagaNISGDLKDPQKAIPKgtllAILTTTV---VYLGSVVLFGACVVRDATGDKN-DTLVTNCTSAA 359
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111243   285 GGKL-------------FQSIFLCT---------TFVNTLASGLASHASVSRLLYVMGRDNVFPE-RVFGYVHPKWRTPA 341
Cdd:TIGR00930 360 CFSEcahntcsyglmnnLQVMSLVSpfpplitagIFSATLSSALASLVSAPRLFQALCKDNIYPFlQFFGKGYGKNGEPL 439
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 90111243   342 LNVIMVGIVALS-ALFFDLVTATALINFGALVAFTFVNLSVFNH-FWRRKGMNKSWKdhFHYLLMPLVGAL 410
Cdd:TIGR00930 440 RAYLLTAFIAEGfILIAELNTIAPIISNFFLASYALINFSCFHAsLLRSPGWRPRFK--YYHWWLSLLGAS 508
cadB PRK10435
cadaverine/lysine antiporter;
58-265 8.93e-03

cadaverine/lysine antiporter;


Pssm-ID: 182458  Cd Length: 435  Bit Score: 38.19  E-value: 8.93e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111243   58 SYLLALAGVLFTAISYGKLVRQFPEAGSAYTYAQKsINPHVGFMVGwsslLDYLFLPMINVLLAKI----YLSALFP--- 130
Cdd:PRK10435  42 GWIISIIGAMSLAYVYARLATKNPQQGGPIAYAGE-ISPAFGFQTG----VLYYHANWIGNLAIGItavsYLSTFFPvln 116
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111243  131 -EVPPWVWVVTFVAILTAANLKSVNLVANFNTL-FVLVQISIMVVFIFlvvqGLHKGEGvgTVWSLQPFISENAHLIPII 208
Cdd:PRK10435 117 dPIPAGIACIAIVWVFTFVNMLGGTWVSRLTTIgLVLVLIPVVGTAIV----GWHWFDA--ATYAANWNTSDTTDGHAII 190
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 90111243  209 TGATIVCFSFLGFDAVTTLSEETPDAARVIPKAIFLTAVYGGVIFIAASFFMQLFFP 265
Cdd:PRK10435 191 KSILLCLWAFVGVESAAVSTGMVKNPKRTVPLATMLGTGLAGIIYIAATQVISGMFP 247
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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