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Conserved domains on  [gi|15831167|ref|NP_309940|]
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hypothetical protein ECs_1913 [Escherichia coli O157:H7 str. Sakai]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF2534 super family cl11343
Protein of unknown function (DUF2534); This family of proteins with unknown function appears ...
 5-83 1.36e-32

Protein of unknown function (DUF2534); This family of proteins with unknown function appears to be restricted to Enterobacteriaceae.


The actual alignment was detected with superfamily member pfam10749:

Pssm-ID: 402400  Cd Length: 80  Bit Score: 107.94  E-value: 1.36e-32
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 15831167    5 KLKSAKGKKFLFGLLAVFIIAASVVTRATIGGVIEQYNIPLSEWTTSMYVIQSSMIFVYSLVFTVLLAIPLGIYFLGGE 83
Cdd:pfam10749  2 KLKSKEGKKYLLGLAIVFIIALSVVTRATIGGVIDQYGIPFSEWTTSMYLIQGAMIAVYSLVFTALMSIPLGFYFLGEK 80
 
Name Accession Description Interval E-value
DUF2534 pfam10749
Protein of unknown function (DUF2534); This family of proteins with unknown function appears ...
 5-83 1.36e-32

Protein of unknown function (DUF2534); This family of proteins with unknown function appears to be restricted to Enterobacteriaceae.


Pssm-ID: 402400  Cd Length: 80  Bit Score: 107.94  E-value: 1.36e-32
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 15831167    5 KLKSAKGKKFLFGLLAVFIIAASVVTRATIGGVIEQYNIPLSEWTTSMYVIQSSMIFVYSLVFTVLLAIPLGIYFLGGE 83
Cdd:pfam10749  2 KLKSKEGKKYLLGLAIVFIIALSVVTRATIGGVIDQYGIPFSEWTTSMYLIQGAMIAVYSLVFTALMSIPLGFYFLGEK 80
 
Name Accession Description Interval E-value
DUF2534 pfam10749
Protein of unknown function (DUF2534); This family of proteins with unknown function appears ...
 5-83 1.36e-32

Protein of unknown function (DUF2534); This family of proteins with unknown function appears to be restricted to Enterobacteriaceae.


Pssm-ID: 402400  Cd Length: 80  Bit Score: 107.94  E-value: 1.36e-32
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 15831167    5 KLKSAKGKKFLFGLLAVFIIAASVVTRATIGGVIEQYNIPLSEWTTSMYVIQSSMIFVYSLVFTVLLAIPLGIYFLGGE 83
Cdd:pfam10749  2 KLKSKEGKKYLLGLAIVFIIALSVVTRATIGGVIDQYGIPFSEWTTSMYLIQGAMIAVYSLVFTALMSIPLGFYFLGEK 80
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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