NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|15829651|ref|NP_308424|]
View 

beta-D-galactosidase [Escherichia coli O157:H7 str. Sakai]

Protein Classification

beta-galactosidase( domain architecture ID 11484318)

beta-galactosidase catalyzes the hydrolysis of terminal non-reducing beta-D-galactose residues in beta-D-galactosides

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

Name Accession Description Interval E-value
lacZ PRK09525
beta-galactosidase;
1-1024 0e+00

beta-galactosidase;


:

Pssm-ID: 236548 [Multi-domain]  Cd Length: 1027  Bit Score: 2182.78  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829651     1 MTMITDSLAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTNRPSQQLRSLNGEWQFVWFPAPEAVPESWLECDLP 80
Cdd:PRK09525    1 MTMIMDSLAQILARRDWENPGVTQLNRLPAHPPFASWRNSEAARDDRPSQQRQSLNGEWRFSYFPAPEAVPESWLECDLP 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829651    81 DADTVVVPSNWQMHGYDAPIYTNVTYPITVNPPFVPTENPTGCYSLTFNVDESWLQEGQTRIIFDGVNSAFHLWCNGRWV 160
Cdd:PRK09525   81 DADTIPVPSNWQLHGYDAPIYTNVTYPIPVNPPFVPEENPTGCYSLTFTVDESWLQSGQTRIIFDGVNSAFHLWCNGRWV 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829651   161 GYGQDSRLLSEFDLSAFLRAGENRLAVMVLRWSDGSYLEDQDMWRMSGIFRDVSLLHKPTTQISDFHVATLFNDDFSRAV 240
Cdd:PRK09525  161 GYSQDSRLPAEFDLSPFLRAGENRLAVMVLRWSDGSYLEDQDMWRMSGIFRDVSLLHKPTTQLSDFHITTELDDDFRRAV 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829651   241 LEAEVQMYGELRDELRVTVSLWQGETQVASGTAPFGGEIIDERGGYADRVTLGLNVENPKLWSAEIPNIYRAVVELHTAD 320
Cdd:PRK09525  241 LEVEAQVNGELRDELRVTVQLWDGETLVASGTAPFGTEIIDERGAYADRVTLRLNVENPKLWSAETPNLYRAVVSLLDAD 320
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829651   321 GTLIEAEACDVGFREVRIENGLLLLNGKPLLIRGVNRHEHHPLHGQVMDEQTMVQDILLMKQNNFNAVRCSHYPNHPLWY 400
Cdd:PRK09525  321 GTLIEAEAYDVGFRKVEIENGLLKLNGKPLLIRGVNRHEHHPEHGQVMDEETMVQDILLMKQHNFNAVRCSHYPNHPLWY 400
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829651   401 TLCDRYGLYVVDEANIETHGMVPMNRLTDDPRWLPAMSERVTRMVQRDRNHPSVIIWSLGNESGHGANHDALYRWIKSVD 480
Cdd:PRK09525  401 ELCDRYGLYVVDEANIETHGMVPMNRLSDDPRWLPAMSERVTRMVQRDRNHPSIIIWSLGNESGHGANHDALYRWIKSND 480
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829651   481 PSRPVQYEGGGADTSATDIICPMYARVDEDQPFPAVPKWSIKKWLSLPGEMRPLILCEYAHAMGNSLGGFAKYWQAFRQY 560
Cdd:PRK09525  481 PSRPVQYEGGGADTAATDIICPMYARVDEDQPFPAVPKWSIKKWISLPGETRPLILCEYAHAMGNSLGGFAKYWQAFRQY 560
                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829651   561 PRLQGGFVWDLVDQSLIKYDENGNPWSAYGGDFGDTPNDRQFCMNGLVFADRTPHPALTEAKHQQQFFQFRL---SGRTI 637
Cdd:PRK09525  561 PRLQGGFIWDWVDQGLTKYDENGNPWWAYGGDFGDTPNDRQFCMNGLVFPDRTPHPALYEAKHAQQFFQFSLlstTPLTI 640
                         650       660       670       680       690       700       710       720
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829651   638 EVTSEYLFRHSDNELLHWTVALDGKPLASGEVPLDVAPQGKQVIELPELPRLESTGQLWLTVHVVQPNATAWSEAGHISA 717
Cdd:PRK09525  641 EVTSEYLFRHSDNELLHWSVALDGKPLASGEVPLDLAPQGSQRITLPELPQPESAGQLWLNVEVVQPNATAWSEAGHRSA 720
                         730       740       750       760       770       780       790       800
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829651   718 WQQWRLAENLSVTLPSAPHAIPQLTTSETDFCIELDNKRWQFNRQSGFLSQMWIGDKKQLLTPLRDQFTRAPLDNDIGVS 797
Cdd:PRK09525  721 WQQWRLPEPLSLPLPTASHAAPQLTQDEQDFCIELGNQRWQFNRQSGLLSQWWVGGKEQLLTPLRDQFTRAPLDNDIGVS 800
                         810       820       830       840       850       860       870       880
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829651   798 EATRIDPNAWVERWKAAGHYQAEAALLQCTADTLADAVLITTVHAWQHQGKTLFISRKTYRIDGSGQMAITVDVEVASDT 877
Cdd:PRK09525  801 EATRIDPNAWVERWKAAGLYQLEARLLQCDADTLADAVLITTEHAYQHQGKTLFISRKTYRIDGQGEMTIDVDVEVASDL 880
                         890       900       910       920       930       940       950       960
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829651   878 PHPARIGLTCQLAQVAERVNWLGLGPQENYPDRLTAACFDRWDLPLSDMYTPYVFPSENGLRCGTRELNYGPHQWRGDFQ 957
Cdd:PRK09525  881 PPPARIGLTCQLAQVAERVSWLGLGPHENYPDRLLAACFGRWDLPLSDMHTPYIFPSENGLRCGTRELNYGRHQIRGDFH 960
                         970       980       990      1000      1010      1020
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 15829651   958 FNISRYSQQQLMETSHRHLLHAEEGTWLNIDGFHMGIGGDDSWSPSVSAEFQLSAGRYHYQLVWCQK 1024
Cdd:PRK09525  961 FNISRYSQQQLMETSHRHLLQAEEGTWLNIDGFHMGVGGDDSWSPSVHPEFLLSAGRYHYQLTWCQK 1027
 
Name Accession Description Interval E-value
lacZ PRK09525
beta-galactosidase;
1-1024 0e+00

beta-galactosidase;


Pssm-ID: 236548 [Multi-domain]  Cd Length: 1027  Bit Score: 2182.78  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829651     1 MTMITDSLAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTNRPSQQLRSLNGEWQFVWFPAPEAVPESWLECDLP 80
Cdd:PRK09525    1 MTMIMDSLAQILARRDWENPGVTQLNRLPAHPPFASWRNSEAARDDRPSQQRQSLNGEWRFSYFPAPEAVPESWLECDLP 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829651    81 DADTVVVPSNWQMHGYDAPIYTNVTYPITVNPPFVPTENPTGCYSLTFNVDESWLQEGQTRIIFDGVNSAFHLWCNGRWV 160
Cdd:PRK09525   81 DADTIPVPSNWQLHGYDAPIYTNVTYPIPVNPPFVPEENPTGCYSLTFTVDESWLQSGQTRIIFDGVNSAFHLWCNGRWV 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829651   161 GYGQDSRLLSEFDLSAFLRAGENRLAVMVLRWSDGSYLEDQDMWRMSGIFRDVSLLHKPTTQISDFHVATLFNDDFSRAV 240
Cdd:PRK09525  161 GYSQDSRLPAEFDLSPFLRAGENRLAVMVLRWSDGSYLEDQDMWRMSGIFRDVSLLHKPTTQLSDFHITTELDDDFRRAV 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829651   241 LEAEVQMYGELRDELRVTVSLWQGETQVASGTAPFGGEIIDERGGYADRVTLGLNVENPKLWSAEIPNIYRAVVELHTAD 320
Cdd:PRK09525  241 LEVEAQVNGELRDELRVTVQLWDGETLVASGTAPFGTEIIDERGAYADRVTLRLNVENPKLWSAETPNLYRAVVSLLDAD 320
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829651   321 GTLIEAEACDVGFREVRIENGLLLLNGKPLLIRGVNRHEHHPLHGQVMDEQTMVQDILLMKQNNFNAVRCSHYPNHPLWY 400
Cdd:PRK09525  321 GTLIEAEAYDVGFRKVEIENGLLKLNGKPLLIRGVNRHEHHPEHGQVMDEETMVQDILLMKQHNFNAVRCSHYPNHPLWY 400
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829651   401 TLCDRYGLYVVDEANIETHGMVPMNRLTDDPRWLPAMSERVTRMVQRDRNHPSVIIWSLGNESGHGANHDALYRWIKSVD 480
Cdd:PRK09525  401 ELCDRYGLYVVDEANIETHGMVPMNRLSDDPRWLPAMSERVTRMVQRDRNHPSIIIWSLGNESGHGANHDALYRWIKSND 480
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829651   481 PSRPVQYEGGGADTSATDIICPMYARVDEDQPFPAVPKWSIKKWLSLPGEMRPLILCEYAHAMGNSLGGFAKYWQAFRQY 560
Cdd:PRK09525  481 PSRPVQYEGGGADTAATDIICPMYARVDEDQPFPAVPKWSIKKWISLPGETRPLILCEYAHAMGNSLGGFAKYWQAFRQY 560
                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829651   561 PRLQGGFVWDLVDQSLIKYDENGNPWSAYGGDFGDTPNDRQFCMNGLVFADRTPHPALTEAKHQQQFFQFRL---SGRTI 637
Cdd:PRK09525  561 PRLQGGFIWDWVDQGLTKYDENGNPWWAYGGDFGDTPNDRQFCMNGLVFPDRTPHPALYEAKHAQQFFQFSLlstTPLTI 640
                         650       660       670       680       690       700       710       720
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829651   638 EVTSEYLFRHSDNELLHWTVALDGKPLASGEVPLDVAPQGKQVIELPELPRLESTGQLWLTVHVVQPNATAWSEAGHISA 717
Cdd:PRK09525  641 EVTSEYLFRHSDNELLHWSVALDGKPLASGEVPLDLAPQGSQRITLPELPQPESAGQLWLNVEVVQPNATAWSEAGHRSA 720
                         730       740       750       760       770       780       790       800
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829651   718 WQQWRLAENLSVTLPSAPHAIPQLTTSETDFCIELDNKRWQFNRQSGFLSQMWIGDKKQLLTPLRDQFTRAPLDNDIGVS 797
Cdd:PRK09525  721 WQQWRLPEPLSLPLPTASHAAPQLTQDEQDFCIELGNQRWQFNRQSGLLSQWWVGGKEQLLTPLRDQFTRAPLDNDIGVS 800
                         810       820       830       840       850       860       870       880
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829651   798 EATRIDPNAWVERWKAAGHYQAEAALLQCTADTLADAVLITTVHAWQHQGKTLFISRKTYRIDGSGQMAITVDVEVASDT 877
Cdd:PRK09525  801 EATRIDPNAWVERWKAAGLYQLEARLLQCDADTLADAVLITTEHAYQHQGKTLFISRKTYRIDGQGEMTIDVDVEVASDL 880
                         890       900       910       920       930       940       950       960
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829651   878 PHPARIGLTCQLAQVAERVNWLGLGPQENYPDRLTAACFDRWDLPLSDMYTPYVFPSENGLRCGTRELNYGPHQWRGDFQ 957
Cdd:PRK09525  881 PPPARIGLTCQLAQVAERVSWLGLGPHENYPDRLLAACFGRWDLPLSDMHTPYIFPSENGLRCGTRELNYGRHQIRGDFH 960
                         970       980       990      1000      1010      1020
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 15829651   958 FNISRYSQQQLMETSHRHLLHAEEGTWLNIDGFHMGIGGDDSWSPSVSAEFQLSAGRYHYQLVWCQK 1024
Cdd:PRK09525  961 FNISRYSQQQLMETSHRHLLQAEEGTWLNIDGFHMGVGGDDSWSPSVHPEFLLSAGRYHYQLTWCQK 1027
LacZ COG3250
Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism];
57-630 2.97e-175

Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism];


Pssm-ID: 442481 [Multi-domain]  Cd Length: 638  Bit Score: 525.87  E-value: 2.97e-175
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829651   57 GEWQFVWFPAPEAVPESWlecDLPDADTVVVPSNWQMHGYDAPiytnvtypitvnPPFVPT---ENPTGCYSLTFNVDES 133
Cdd:COG3250    1 GGWKFRLGDAPEGAKPDF---DDSGWDPITVPGDWELDLYGLP------------DPFVGPwylYNGVGWYRRTFTVPAS 65
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829651  134 WlQEGQTRIIFDGVNSAFHLWCNGRWVGYGQDSRLLSEFDLSAFLRAGENRLAVMVLRWSDGSYLEDQDMWRMSGIFRDV 213
Cdd:COG3250   66 W-KGKRVFLHFEGVDTAAEVWVNGKKVGYHEGGFTPFEFDITDYLKPGENVLAVRVDNPSDGSYLEGQDWWRTSGIYRDV 144
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829651  214 SLLHKPTTQISDFHVATLFNDDfsRAVLEAEVQMYGELRDELRVTVSLW-QGETQVASGTAPfggeiIDERGGYADRVTL 292
Cdd:COG3250  145 WLEATPKVHIEDVFVTPDLDDG--SATLTVEVELENESDAGVTVEVTLLdADGKVVATATAK-----VTLAAGEENTVTL 217
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829651  293 GLNVENPKLWSAEIPNIYRAVVELhTADGTLIEAEACDVGFREVRIE-------NGLLLLngkpllIRGVNRHEHHPLHG 365
Cdd:COG3250  218 TLTVPNPKLWSPEDPNLYTLVVTL-KDDGKVVDTVSTRFGFRTIEIDgdggfllNGKPVF------LKGVNRHEDWPDDG 290
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829651  366 QVMDEQTMVQDILLMKQNNFNAVRCSHYPNHPLWYTLCDRYGLYVVDEANIETHGMvpmnrLTDDPRWLPAMSERVTRMV 445
Cdd:COG3250  291 RAVTDEAMRRDLELMKEAGFNAVRTSHYPEDPEFYDLCDELGLLVWDEAPFEWHGM-----LGDDPEFLEAVEAELREMV 365
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829651  446 QRDRNHPSVIIWSLGNESGHGANHDALYRWIKSVDPSRPVqyegggadtsatdiicpmyarvdedqpfpavpkwsikkwl 525
Cdd:COG3250  366 RRDRNHPSIILWSGGNESGGGPNFAALYEWVKELDPTRPV---------------------------------------- 405
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829651  526 slpgemrpLILCEYAHAMGNSLGG----------------FAKYWQAFRQYPRLQGGFVWDLVDQSLIKydengnpwsay 589
Cdd:COG3250  406 --------RFLSEYGHAMPNSLGGgyhqpsdfeeyqalqaLEEYWEAFRRRPRLAGGFIWQLNDYWPEP----------- 466
                        570       580       590       600
                 ....*....|....*....|....*....|....*....|..
gi 15829651  590 ggdfgdTPNDRQFCMNGLVFA-DRTPHPALTEAKHQQQFFQF 630
Cdd:COG3250  467 ------RDNDGNFCSWGLVDYyDRTPKPAYYEVKSAWQPVLV 502
Glyco_hydro_2_C pfam02836
Glycosyl hydrolases family 2, TIM barrel domain; This family contains beta-galactosidase, ...
336-630 1.44e-149

Glycosyl hydrolases family 2, TIM barrel domain; This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities.


Pssm-ID: 397119 [Multi-domain]  Cd Length: 302  Bit Score: 446.51  E-value: 1.44e-149
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829651    336 VRIENGLLLLNGKPLLIRGVNRHEHHPLHGQVMDEQTMVQDILLMKQNNFNAVRCSHYPNHPLWYTLCDRYGLYVVDEAN 415
Cdd:pfam02836    1 VEVKDGLFLINGKPFYFRGVNRHEDHDRRGRGFDMDLMVKDIQLMKQNNINAVRTSHYPNHPEWYQLCDEYGIYVIDEAN 80
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829651    416 IETHGMVPM--------NRLTDDPRWLPAMSERVTRMVQRDRNHPSVIIWSLGNESGHGANHDALYRWIKSVDPSRPVQY 487
Cdd:pfam02836   81 LETHGLWQKfgeiepsySELTDNPEWLPAHLERAEELVQRDKNHPSVIIWSLGNESGAGENIAAMYAATKSLDPTRPVHY 160
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829651    488 EGGGADTSATDIICPMYARVDEDQPFPAVpkwsIKKWLSLP--GEMRPLILCEYAHAMGNSLGGFAKYWQAFRQYPRLQG 565
Cdd:pfam02836  161 EGVGIDPEVDDIILDIYSRMYEDYGHPEV----IEKYLEDWykKPQKPIIICEYGHAMGNSPGGLQEYQDLFYKYPEYQG 236
                          250       260       270       280       290       300
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 15829651    566 GFVWDLVDQSLIKYDEN-GNPWSAYGGDFGDTPNDRQFCMNGLVFADRTPHPALTEAKHQQQFFQF 630
Cdd:pfam02836  237 GFIWDWHDQGIQKRDPNvGGEWYWYGGDFGDRPSDYRFCGNGLFFADRTPKPALFELKKRYWPIKI 302
Bgal_small_N smart01038
Beta galactosidase small chain; This domain comprises the small chain of dimeric ...
753-1021 6.32e-100

Beta galactosidase small chain; This domain comprises the small chain of dimeric beta-galactosidases EC:3.2.1.23. This domain is also found in single chain beta-galactosidase.


Pssm-ID: 214988 [Multi-domain]  Cd Length: 272  Bit Score: 315.29  E-value: 6.32e-100
                            10        20        30        40        50        60        70        80
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829651     753 DNKRWQFNRQSGFLSQMWIGDKKQLLTPLRDQFTRAPLDNDIGVSeatridPNAWVERWKAAGHYQAEAALLQCTADTLA 832
Cdd:smart01038    3 GGFSYTFDKATGALTSWTYNGKELLLRGPKPNFWRAPTDNDRGNG------PNAWAARWKAAGLDRLTTRVRSVEVEQDS 76
                            90       100       110       120       130       140       150       160
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829651     833 DAVLITTVHAWQHQGKtLFISRKTYRIDGSGQMAITVDVEVASDTPHP-ARIGLTCQLAQVAERVNWLGLGPQENYPDRL 911
Cdd:smart01038   77 DVVVTVEYLLAAPSGW-GFTVTVTYTIDGDGEVKVDVTFTPGGGALPDlPRIGLRFRLPDELEQVEWYGRGPGENYPDRK 155
                           170       180       190       200       210       220       230       240
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829651     912 TAACFDRWDLPLSDMYTPYVFPSENGLRCGTRELNYGPHQWRG-------DFQFNISRYSQQQLMETSHRHLLHAEEGTW 984
Cdd:smart01038  156 QSARLGRYSSTVDDLFTPYVRPQENGNRTDVRWLTLTDDAGNGlrvtadqPFSFSALPYSAEDLEEAKHPHELPPRDGTV 235
                           250       260       270
                    ....*....|....*....|....*....|....*..
gi 15829651     985 LNIDGFHMGIGGDDSWSPSVSAEFQLSAGRYHYQLVW 1021
Cdd:smart01038  236 LNLDAKQMGVGGDDSWGPGVLPEYRLPADEYSFSFTL 272
 
Name Accession Description Interval E-value
lacZ PRK09525
beta-galactosidase;
1-1024 0e+00

beta-galactosidase;


Pssm-ID: 236548 [Multi-domain]  Cd Length: 1027  Bit Score: 2182.78  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829651     1 MTMITDSLAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTNRPSQQLRSLNGEWQFVWFPAPEAVPESWLECDLP 80
Cdd:PRK09525    1 MTMIMDSLAQILARRDWENPGVTQLNRLPAHPPFASWRNSEAARDDRPSQQRQSLNGEWRFSYFPAPEAVPESWLECDLP 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829651    81 DADTVVVPSNWQMHGYDAPIYTNVTYPITVNPPFVPTENPTGCYSLTFNVDESWLQEGQTRIIFDGVNSAFHLWCNGRWV 160
Cdd:PRK09525   81 DADTIPVPSNWQLHGYDAPIYTNVTYPIPVNPPFVPEENPTGCYSLTFTVDESWLQSGQTRIIFDGVNSAFHLWCNGRWV 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829651   161 GYGQDSRLLSEFDLSAFLRAGENRLAVMVLRWSDGSYLEDQDMWRMSGIFRDVSLLHKPTTQISDFHVATLFNDDFSRAV 240
Cdd:PRK09525  161 GYSQDSRLPAEFDLSPFLRAGENRLAVMVLRWSDGSYLEDQDMWRMSGIFRDVSLLHKPTTQLSDFHITTELDDDFRRAV 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829651   241 LEAEVQMYGELRDELRVTVSLWQGETQVASGTAPFGGEIIDERGGYADRVTLGLNVENPKLWSAEIPNIYRAVVELHTAD 320
Cdd:PRK09525  241 LEVEAQVNGELRDELRVTVQLWDGETLVASGTAPFGTEIIDERGAYADRVTLRLNVENPKLWSAETPNLYRAVVSLLDAD 320
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829651   321 GTLIEAEACDVGFREVRIENGLLLLNGKPLLIRGVNRHEHHPLHGQVMDEQTMVQDILLMKQNNFNAVRCSHYPNHPLWY 400
Cdd:PRK09525  321 GTLIEAEAYDVGFRKVEIENGLLKLNGKPLLIRGVNRHEHHPEHGQVMDEETMVQDILLMKQHNFNAVRCSHYPNHPLWY 400
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829651   401 TLCDRYGLYVVDEANIETHGMVPMNRLTDDPRWLPAMSERVTRMVQRDRNHPSVIIWSLGNESGHGANHDALYRWIKSVD 480
Cdd:PRK09525  401 ELCDRYGLYVVDEANIETHGMVPMNRLSDDPRWLPAMSERVTRMVQRDRNHPSIIIWSLGNESGHGANHDALYRWIKSND 480
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829651   481 PSRPVQYEGGGADTSATDIICPMYARVDEDQPFPAVPKWSIKKWLSLPGEMRPLILCEYAHAMGNSLGGFAKYWQAFRQY 560
Cdd:PRK09525  481 PSRPVQYEGGGADTAATDIICPMYARVDEDQPFPAVPKWSIKKWISLPGETRPLILCEYAHAMGNSLGGFAKYWQAFRQY 560
                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829651   561 PRLQGGFVWDLVDQSLIKYDENGNPWSAYGGDFGDTPNDRQFCMNGLVFADRTPHPALTEAKHQQQFFQFRL---SGRTI 637
Cdd:PRK09525  561 PRLQGGFIWDWVDQGLTKYDENGNPWWAYGGDFGDTPNDRQFCMNGLVFPDRTPHPALYEAKHAQQFFQFSLlstTPLTI 640
                         650       660       670       680       690       700       710       720
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829651   638 EVTSEYLFRHSDNELLHWTVALDGKPLASGEVPLDVAPQGKQVIELPELPRLESTGQLWLTVHVVQPNATAWSEAGHISA 717
Cdd:PRK09525  641 EVTSEYLFRHSDNELLHWSVALDGKPLASGEVPLDLAPQGSQRITLPELPQPESAGQLWLNVEVVQPNATAWSEAGHRSA 720
                         730       740       750       760       770       780       790       800
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829651   718 WQQWRLAENLSVTLPSAPHAIPQLTTSETDFCIELDNKRWQFNRQSGFLSQMWIGDKKQLLTPLRDQFTRAPLDNDIGVS 797
Cdd:PRK09525  721 WQQWRLPEPLSLPLPTASHAAPQLTQDEQDFCIELGNQRWQFNRQSGLLSQWWVGGKEQLLTPLRDQFTRAPLDNDIGVS 800
                         810       820       830       840       850       860       870       880
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829651   798 EATRIDPNAWVERWKAAGHYQAEAALLQCTADTLADAVLITTVHAWQHQGKTLFISRKTYRIDGSGQMAITVDVEVASDT 877
Cdd:PRK09525  801 EATRIDPNAWVERWKAAGLYQLEARLLQCDADTLADAVLITTEHAYQHQGKTLFISRKTYRIDGQGEMTIDVDVEVASDL 880
                         890       900       910       920       930       940       950       960
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829651   878 PHPARIGLTCQLAQVAERVNWLGLGPQENYPDRLTAACFDRWDLPLSDMYTPYVFPSENGLRCGTRELNYGPHQWRGDFQ 957
Cdd:PRK09525  881 PPPARIGLTCQLAQVAERVSWLGLGPHENYPDRLLAACFGRWDLPLSDMHTPYIFPSENGLRCGTRELNYGRHQIRGDFH 960
                         970       980       990      1000      1010      1020
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 15829651   958 FNISRYSQQQLMETSHRHLLHAEEGTWLNIDGFHMGIGGDDSWSPSVSAEFQLSAGRYHYQLVWCQK 1024
Cdd:PRK09525  961 FNISRYSQQQLMETSHRHLLQAEEGTWLNIDGFHMGVGGDDSWSPSVHPEFLLSAGRYHYQLTWCQK 1027
ebgA PRK10340
cryptic beta-D-galactosidase subunit alpha; Reviewed
17-1004 0e+00

cryptic beta-D-galactosidase subunit alpha; Reviewed


Pssm-ID: 236673 [Multi-domain]  Cd Length: 1021  Bit Score: 765.76  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829651    17 WENPGVTQLNRLAAHPPFASWRNSEEARTNRP--SQQLRSLNGEWQFVWFPAPEAVPESWLECDLPDADTVVVPSNWQMH 94
Cdd:PRK10340    4 WENIQLTHENRLAPRAYFFSYDSVAQARTFARetSSLFLLLSGQWNFHFFDHPLYVPEAFTSELMSDWGHITVPAMWQME 83
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829651    95 GYDAPIYTNVTYPITVNPPFVPTENPTGCYSLTFNVDESWLQEgQTRIIFDGVNSAFHLWCNGRWVGYGQDSRLLSEFDL 174
Cdd:PRK10340   84 GHGKLQYTDEGFPFPIDVPFVPSDNPTGAYQRTFTLSDGWQGK-QTIIKFDGVETYFEVYVNGQYVGFSKGSRLTAEFDI 162
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829651   175 SAFLRAGENRLAVMVLRWSDGSYLEDQDMWRMSGIFRDVSLLHKPTTQISDFHVATLFNDDFSRAVLEAEVQMYG--ELR 252
Cdd:PRK10340  163 SAMVKTGDNLLCVRVMQWADSTYLEDQDMWWLAGIFRDVYLVGKPLTHINDFTVRTDFDEDYCDATLSCEVVLENlaASP 242
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829651   253 DELRVTVSLWQGETQVASGTApfGGEIIDERGGyadrVTLGLNVENPKLWSAEIPNIYRAVVELHTADGTLIEAEACDVG 332
Cdd:PRK10340  243 VVTTLEYTLFDGERVVHSSAI--DHLAIEKLTS----ASFAFTVEQPQQWSAESPYLYHLVMTLKDANGNVLEVVPQRVG 316
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829651   333 FREVRIENGLLLLNGKPLLIRGVNRHEHHPLHGQVMDEQTMVQDILLMKQNNFNAVRCSHYPNHPLWYTLCDRYGLYVVD 412
Cdd:PRK10340  317 FRDIKVRDGLFWINNRYVKLHGVNRHDNDHRKGRAVGMDRVEKDIQLMKQHNINSVRTAHYPNDPRFYELCDIYGLFVMA 396
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829651   413 EANIETHGMV---PMNRLTDDPRWLPAMSERVTRMVQRDRNHPSVIIWSLGNESGHGANHDALYRWIKSVDPSRPVQYEg 489
Cdd:PRK10340  397 ETDVESHGFAnvgDISRITDDPQWEKVYVDRIVRHIHAQKNHPSIIIWSLGNESGYGCNIRAMYHAAKALDDTRLVHYE- 475
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829651   490 GGADTSATDIICPMYARVDEDQPFPAVPKwsikkwlslpgeMRPLILCEYAHAMGNSLGGFAKYWQAFRQYPRLQGGFVW 569
Cdd:PRK10340  476 EDRDAEVVDVISTMYTRVELMNEFGEYPH------------PKPRILCEYAHAMGNGPGGLTEYQNVFYKHDCIQGHYVW 543
                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829651   570 DLVDQSLIKYDENGNPWSAYGGDFGDTPNDRQFCMNGLVFADRTPHPALTEAKhqQQFFQFRLSGR-----TIEVTSEYL 644
Cdd:PRK10340  544 EWCDHGIQAQDDNGNVWYKYGGDYGDYPNNYNFCIDGLIYPDQTPGPGLKEYK--QVIAPVKIHALdltrgELKVENKLW 621
                         650       660       670       680       690       700       710       720
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829651   645 FRHSDNELLHWTVALDGKPLASGEVPL-DVAPQGKQVIELpELPRLEsTGQLWLTVHVVQPNATAWSEAGHISAWQQWRL 723
Cdd:PRK10340  622 FTNLDDYTLHAEVRAEGETLASGQIKLrDVAPNSEAPLQI-TLPQLD-AREAFLNITVTKDSRTRYSEAGHSIATYQFPL 699
                         730       740       750       760       770       780       790       800
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829651   724 AENLSVTLPSAPHAIPQLTTSE--TDFCIELDNKRWQFNRQSGFLSQMWIGDKKQLLTPLRDQFTRAPLDNDIGVSEATr 801
Cdd:PRK10340  700 KENTAQPVPFAPNNARPLTLEEdrLSCTVRGYNFAITFSKVSGKLTSWQVNGESLLTREPKINFFKPMIDNHKQEYEGL- 778
                         810       820       830       840       850       860       870       880
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829651   802 IDP---NAWVERWKAAGHYQAEAALLQCTADTLAdavliTTVHAWQHQgktlfiSRKTYRIDGSGQMAITVDVEVASDTP 878
Cdd:PRK10340  779 WQPnhlQIMQEHLRDFAVEQSDGEVLIISRTVIA-----PPVFDFGMR------CTYIYRIAADGQVNVALSGERYGDYP 847
                         890       900       910       920       930       940       950       960
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829651   879 H--PaRIGLTCQLAQVAERVNWLGLGPQENYPDRLTAACFDRWDLPLSDMYTPYVFPSENGLRCGTRELNYGPHQWRG-- 954
Cdd:PRK10340  848 HmiP-CIGFTMGINGEYDQVAYYGRGPGENYADSQQANLIDIYRSTVDAMFENYPFPQNNGNRQHVRWTALTNRHGNGll 926
                         970       980       990      1000      1010
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 15829651   955 -----DFQFNISRYSQQQLMETSHRHLLHAEEGTWLNIDGFHMGIgGDDSWSPSV 1004
Cdd:PRK10340  927 vvpqrPINFSAWHYTQENIHAAQHTNELQKSDYITLNLDHQLLGL-GSNSWGSEV 980
LacZ COG3250
Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism];
57-630 2.97e-175

Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism];


Pssm-ID: 442481 [Multi-domain]  Cd Length: 638  Bit Score: 525.87  E-value: 2.97e-175
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829651   57 GEWQFVWFPAPEAVPESWlecDLPDADTVVVPSNWQMHGYDAPiytnvtypitvnPPFVPT---ENPTGCYSLTFNVDES 133
Cdd:COG3250    1 GGWKFRLGDAPEGAKPDF---DDSGWDPITVPGDWELDLYGLP------------DPFVGPwylYNGVGWYRRTFTVPAS 65
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829651  134 WlQEGQTRIIFDGVNSAFHLWCNGRWVGYGQDSRLLSEFDLSAFLRAGENRLAVMVLRWSDGSYLEDQDMWRMSGIFRDV 213
Cdd:COG3250   66 W-KGKRVFLHFEGVDTAAEVWVNGKKVGYHEGGFTPFEFDITDYLKPGENVLAVRVDNPSDGSYLEGQDWWRTSGIYRDV 144
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829651  214 SLLHKPTTQISDFHVATLFNDDfsRAVLEAEVQMYGELRDELRVTVSLW-QGETQVASGTAPfggeiIDERGGYADRVTL 292
Cdd:COG3250  145 WLEATPKVHIEDVFVTPDLDDG--SATLTVEVELENESDAGVTVEVTLLdADGKVVATATAK-----VTLAAGEENTVTL 217
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829651  293 GLNVENPKLWSAEIPNIYRAVVELhTADGTLIEAEACDVGFREVRIE-------NGLLLLngkpllIRGVNRHEHHPLHG 365
Cdd:COG3250  218 TLTVPNPKLWSPEDPNLYTLVVTL-KDDGKVVDTVSTRFGFRTIEIDgdggfllNGKPVF------LKGVNRHEDWPDDG 290
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829651  366 QVMDEQTMVQDILLMKQNNFNAVRCSHYPNHPLWYTLCDRYGLYVVDEANIETHGMvpmnrLTDDPRWLPAMSERVTRMV 445
Cdd:COG3250  291 RAVTDEAMRRDLELMKEAGFNAVRTSHYPEDPEFYDLCDELGLLVWDEAPFEWHGM-----LGDDPEFLEAVEAELREMV 365
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829651  446 QRDRNHPSVIIWSLGNESGHGANHDALYRWIKSVDPSRPVqyegggadtsatdiicpmyarvdedqpfpavpkwsikkwl 525
Cdd:COG3250  366 RRDRNHPSIILWSGGNESGGGPNFAALYEWVKELDPTRPV---------------------------------------- 405
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829651  526 slpgemrpLILCEYAHAMGNSLGG----------------FAKYWQAFRQYPRLQGGFVWDLVDQSLIKydengnpwsay 589
Cdd:COG3250  406 --------RFLSEYGHAMPNSLGGgyhqpsdfeeyqalqaLEEYWEAFRRRPRLAGGFIWQLNDYWPEP----------- 466
                        570       580       590       600
                 ....*....|....*....|....*....|....*....|..
gi 15829651  590 ggdfgdTPNDRQFCMNGLVFA-DRTPHPALTEAKHQQQFFQF 630
Cdd:COG3250  467 ------RDNDGNFCSWGLVDYyDRTPKPAYYEVKSAWQPVLV 502
Glyco_hydro_2_C pfam02836
Glycosyl hydrolases family 2, TIM barrel domain; This family contains beta-galactosidase, ...
336-630 1.44e-149

Glycosyl hydrolases family 2, TIM barrel domain; This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities.


Pssm-ID: 397119 [Multi-domain]  Cd Length: 302  Bit Score: 446.51  E-value: 1.44e-149
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829651    336 VRIENGLLLLNGKPLLIRGVNRHEHHPLHGQVMDEQTMVQDILLMKQNNFNAVRCSHYPNHPLWYTLCDRYGLYVVDEAN 415
Cdd:pfam02836    1 VEVKDGLFLINGKPFYFRGVNRHEDHDRRGRGFDMDLMVKDIQLMKQNNINAVRTSHYPNHPEWYQLCDEYGIYVIDEAN 80
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829651    416 IETHGMVPM--------NRLTDDPRWLPAMSERVTRMVQRDRNHPSVIIWSLGNESGHGANHDALYRWIKSVDPSRPVQY 487
Cdd:pfam02836   81 LETHGLWQKfgeiepsySELTDNPEWLPAHLERAEELVQRDKNHPSVIIWSLGNESGAGENIAAMYAATKSLDPTRPVHY 160
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829651    488 EGGGADTSATDIICPMYARVDEDQPFPAVpkwsIKKWLSLP--GEMRPLILCEYAHAMGNSLGGFAKYWQAFRQYPRLQG 565
Cdd:pfam02836  161 EGVGIDPEVDDIILDIYSRMYEDYGHPEV----IEKYLEDWykKPQKPIIICEYGHAMGNSPGGLQEYQDLFYKYPEYQG 236
                          250       260       270       280       290       300
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 15829651    566 GFVWDLVDQSLIKYDEN-GNPWSAYGGDFGDTPNDRQFCMNGLVFADRTPHPALTEAKHQQQFFQF 630
Cdd:pfam02836  237 GFIWDWHDQGIQKRDPNvGGEWYWYGGDFGDRPSDYRFCGNGLFFADRTPKPALFELKKRYWPIKI 302
Bgal_small_N smart01038
Beta galactosidase small chain; This domain comprises the small chain of dimeric ...
753-1021 6.32e-100

Beta galactosidase small chain; This domain comprises the small chain of dimeric beta-galactosidases EC:3.2.1.23. This domain is also found in single chain beta-galactosidase.


Pssm-ID: 214988 [Multi-domain]  Cd Length: 272  Bit Score: 315.29  E-value: 6.32e-100
                            10        20        30        40        50        60        70        80
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829651     753 DNKRWQFNRQSGFLSQMWIGDKKQLLTPLRDQFTRAPLDNDIGVSeatridPNAWVERWKAAGHYQAEAALLQCTADTLA 832
Cdd:smart01038    3 GGFSYTFDKATGALTSWTYNGKELLLRGPKPNFWRAPTDNDRGNG------PNAWAARWKAAGLDRLTTRVRSVEVEQDS 76
                            90       100       110       120       130       140       150       160
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829651     833 DAVLITTVHAWQHQGKtLFISRKTYRIDGSGQMAITVDVEVASDTPHP-ARIGLTCQLAQVAERVNWLGLGPQENYPDRL 911
Cdd:smart01038   77 DVVVTVEYLLAAPSGW-GFTVTVTYTIDGDGEVKVDVTFTPGGGALPDlPRIGLRFRLPDELEQVEWYGRGPGENYPDRK 155
                           170       180       190       200       210       220       230       240
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829651     912 TAACFDRWDLPLSDMYTPYVFPSENGLRCGTRELNYGPHQWRG-------DFQFNISRYSQQQLMETSHRHLLHAEEGTW 984
Cdd:smart01038  156 QSARLGRYSSTVDDLFTPYVRPQENGNRTDVRWLTLTDDAGNGlrvtadqPFSFSALPYSAEDLEEAKHPHELPPRDGTV 235
                           250       260       270
                    ....*....|....*....|....*....|....*..
gi 15829651     985 LNIDGFHMGIGGDDSWSPSVSAEFQLSAGRYHYQLVW 1021
Cdd:smart01038  236 LNLDAKQMGVGGDDSWGPGVLPEYRLPADEYSFSFTL 272
Glyco_hydro_2_N pfam02837
Glycosyl hydrolases family 2, sugar binding domain; This family contains beta-galactosidase, ...
52-219 3.02e-81

Glycosyl hydrolases family 2, sugar binding domain; This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities and has a jelly-roll fold. The domain binds the sugar moiety during the sugar-hydrolysis reaction.


Pssm-ID: 397120 [Multi-domain]  Cd Length: 169  Bit Score: 261.02  E-value: 3.02e-81
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829651     52 LRSLNGEWQFVWFPAPEAVPESWLECDLPDADTVVVPSNWQMHgydaPIYTNVTYPITVNPPFVPTENPTGCYSLTFNVD 131
Cdd:pfam02837    1 IKSLNGEWAFALFDAPCGAPQSWWESALQESRTIAVPSSWNDQ----PIYTNVEYPIDFADPFIPTYNGTGWYQRTFFIP 76
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829651    132 ESWLQEgQTRIIFDGVNSAFHLWCNGRWVGYGQDSRLLSEFDLSAFLRAGENRLAVMVLRWSDGSYLEDQ------DMWR 205
Cdd:pfam02837   77 SKWAGQ-RIRLRFDGVTHYGEVWVNGQWVGEHQGGYTPFEFDLTPYVIAGKNRIAVKVLNWSDG*YIEDQngkyfhDFWN 155
                          170
                   ....*....|....
gi 15829651    206 MSGIFRDVSLLHKP 219
Cdd:pfam02837  156 YSGIYRDVSLLTTP 169
Bgal_small_N pfam02929
Beta galactosidase small chain; This domain comprises the small chain of dimeric ...
753-1021 8.92e-61

Beta galactosidase small chain; This domain comprises the small chain of dimeric beta-galactosidases EC:3.2.1.23. This domain is also found in single chain beta-galactosidase.


Pssm-ID: 460751  Cd Length: 223  Bit Score: 206.57  E-value: 8.92e-61
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829651    753 DNKRWQFNRQSGFLSQMWIGDKKQLLTPL--RDQFTRAPLDNDigvseatridpnawverwkaaghyqaeaallqctadt 830
Cdd:pfam02929    3 GDFSYTFDKATGTLTSYKYDGKELLTEPLtgRPNFWRAPTDND------------------------------------- 45
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829651    831 ladavliTTVhawqhqgktlfisrkTYRIDGSGQMAITVDVEVAS--DTPHPARIGLTCQLAQVAERVNWLGLGPQENYP 908
Cdd:pfam02929   46 -------VTV---------------TYTIYGDGTIKVDVTLKPDGlkGLPELPRFGLRLQLPKSFEQVEWYGRGPGENYP 103
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829651    909 DRLTAACFDRWDLPLSDMYTPYVFPSENGLRCGTRELNYGPHQWRG--------DFQFNISRYSQQQLMETSHRHLLHAE 980
Cdd:pfam02929  104 DRKTGARLGIYESTVDDLFTPYIRPQENGNRTDVRWLTLTDGDGGGllvfvgdgPFSFSALPYTPEELEAAKHPYELPKS 183
                          250       260       270       280
                   ....*....|....*....|....*....|....*....|.
gi 15829651    981 EGTWLNIDGFHMGIgGDDSWSPSVSAEFQLSAGRYHYQLVW 1021
Cdd:pfam02929  184 DETVLNLDYAQMGV-GDNSWGPGVLPEYRLPAKEYSFSFTL 223
PRK10150 PRK10150
beta-D-glucuronidase; Provisional
48-485 6.00e-42

beta-D-glucuronidase; Provisional


Pssm-ID: 236657 [Multi-domain]  Cd Length: 604  Bit Score: 163.25  E-value: 6.00e-42
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829651    48 PSQQLRSLNGEWQFVWFPAPEAVPESWLECDLPDADTVVVPSNWQMHGYDAPIYTNVTYPItvnppfvptenptgcYSLT 127
Cdd:PRK10150    8 KTREIKDLSGLWAFKLDRENCGIDQRWWESALPESRAMAVPGSFNDQFADADIRNYVGDVW---------------YQRE 72
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829651   128 FNVDESWLQEgqtRII--FDGVNSAFHLWCNGRWVGYGQDSRLLSEFDLSAFLRAGEN-RLAVMV---LRWSD---GSYL 198
Cdd:PRK10150   73 VFIPKGWAGQ---RIVlrFGSVTHYAKVWVNGQEVMEHKGGYTPFEADITPYVYAGKSvRITVCVnneLNWQTlppGNVI 149
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829651   199 EDQ----------DMWRMSGIFRDVSLLHKPTTQISDFHVATLFNDDFSRAVLEAEVQMYGElRDELRVTvslwqgetqv 268
Cdd:PRK10150  150 EDGngkkkqkynfDFFNYAGIHRPVMLYTTPKTHIDDITVVTELAQDLNHASVDWSVETNGD-VDSVSVT---------- 218
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829651   269 asgtapfggeIIDERG---GYADRVTLGLNVENPKLWSAEIPNIYRAVVELhTADGTLIEAEACDVGFREVRIENGLLLL 345
Cdd:PRK10150  219 ----------LRDADGqvvATGQGTSGTLQVVNPHLWQPGEGYLYTLCVEL-AKSGTECDTYPLRFGIRSVAVKGGQFLI 287
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829651   346 NGKPLLIRGVNRHEHHPLHGQVMDEQTMVQDILLMKQNNFNAVRCSHYPNHPLWYTLCDRYGLYVVDEA----------- 414
Cdd:PRK10150  288 NGKPFYFKGFGKHEDADIRGKGLDEVLNVHDHNLMKWIGANSFRTSHYPYSEEMLDLADRHGIVVIDETpavglnlsfga 367
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829651   415 -------NIETHGMVPMNRLTDDPRwLPAMSErvtrMVQRDRNHPSVIIWSLGNESghgANHDA--------LYRWIKSV 479
Cdd:PRK10150  368 gleagnkPKETYSEEAVNGETQQAH-LQAIRE----LIARDKNHPSVVMWSIANEP---ASREQgareyfapLAELTRKL 439

                  ....*.
gi 15829651   480 DPSRPV 485
Cdd:PRK10150  440 DPTRPV 445
LacZ_4 pfam16353
Beta-galactosidase, domain 4; This entry represents domain 4 found in beta-galactosidase and ...
637-724 1.83e-25

Beta-galactosidase, domain 4; This entry represents domain 4 found in beta-galactosidase and it is organized in a jelly-roll type barrel (Rutkiewicz-Krotewicz M. et al. Crystals 2018, 8(1), 13, https://doi.org/10.3390/cryst8010013).


Pssm-ID: 465101 [Multi-domain]  Cd Length: 88  Bit Score: 101.11  E-value: 1.83e-25
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829651    637 IEVTSEYLFRHSDNELLHWTVALDGKPLASGEVP-LDVAPQGKQVIELPeLPRLESTGQLWLTVHVVQPNATAWSEAGHI 715
Cdd:pfam16353    1 VTITNRYDFTDLDDYDLSWELLADGKVVASGTLElPDVAPGESATVTLP-LPLPGLAGEYFLTVSFRLKEDTPWAPAGHE 79

                   ....*....
gi 15829651    716 SAWQQWRLA 724
Cdd:pfam16353   80 VAWEQFPLP 88
Glyco_hydro_2 pfam00703
Glycosyl hydrolases family 2; This family contains beta-galactosidase, beta-mannosidase and ...
223-334 4.11e-11

Glycosyl hydrolases family 2; This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities.


Pssm-ID: 395572 [Multi-domain]  Cd Length: 106  Bit Score: 60.57  E-value: 4.11e-11
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829651    223 ISDFHVATLFNDDfSRAVLEAEVQM--YGELRDELRVTVSLWQGETQVASGTAPfggEIIDERGGYADrvtlgLNVENPK 300
Cdd:pfam00703    3 IEDVFITPDLDDD-KTAKVTVEVELenDGDASVEVTLETEIKDADGKTVAAAAK---VLVLGAGETTE-----LEVKNPK 73
                           90       100       110
                   ....*....|....*....|....*....|....
gi 15829651    301 LWSAEIPNIYRAVVELhTADGTLIEAEACDVGFR 334
Cdd:pfam00703   74 LWSPETPNLYTLTVEL-DKDGKVIDEVSTRFGFR 106
LacZ COG3250
Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism];
919-1021 1.31e-06

Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism];


Pssm-ID: 442481 [Multi-domain]  Cd Length: 638  Bit Score: 52.45  E-value: 1.31e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15829651  919 WDLPLSDMYTPYVFPSENGLRCGTRELNYGPHQWRGDFQFNISRYSQQQLMETSHRHLLHAEEGTWLNIDGFHMGIGGDD 998
Cdd:COG3250  524 YSSTVADLYTPYVRPQENGNRTDVRWLTLTNGKGKGLLVSGVPLLSGSALAYLTEDLLAAKEEGLLLAADLTTLLLDLAD 603
                         90       100
                 ....*....|....*....|...
gi 15829651  999 SWSPSVSAEFQLSAGRYHYQLVW 1021
Cdd:COG3250  604 LGGGGNSGGGLLLLGGLLVEKDL 626
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH