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Conserved domains on  [gi|15600067|ref|NP_253561|]
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hypothetical protein PA4874 [Pseudomonas aeruginosa PAO1]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PRK11505 super family cl32695
phosphate starvation-inducible protein PsiF;
9-97 9.60e-22

phosphate starvation-inducible protein PsiF;


The actual alignment was detected with superfamily member PRK11505:

Pssm-ID: 183165 [Multi-domain]  Cd Length: 106  Bit Score: 83.20  E-value: 9.60e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15600067    9 FVLAMAVSAHGFAATAQQEKMTACNAEATTKALKGDERKAFMSGCLK--AGAPAGGKATAQQEKMKSCNADASAKSLKGD 86
Cdd:PRK11505  13 LVFLTTVGAAERTLTPQQQRMTSCNQQATAQALKGDARKTYMSDCLKnsKSAPGEKSLTPQQQKMRECNNQATQQSLKGD 92

                         90
                 ....*....|.
gi 15600067   87 ERKAFMSSCLK 97
Cdd:PRK11505  93 DRNKFMSACLK 103
PRK11505 super family cl32695
phosphate starvation-inducible protein PsiF;
65-138 9.31e-20

phosphate starvation-inducible protein PsiF;


The actual alignment was detected with superfamily member PRK11505:

Pssm-ID: 183165 [Multi-domain]  Cd Length: 106  Bit Score: 78.19  E-value: 9.31e-20
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 15600067   65 TAQQEKMKSCNADASAKSLKGDERKAFMSSCLK----AGGSAKAATQQEKMKTCNADATAKALKGDERKAFMSTCLKK 138
Cdd:PRK11505  27 TPQQQRMTSCNQQATAQALKGDARKTYMSDCLKnsksAPGEKSLTPQQQKMRECNNQATQQSLKGDDRNKFMSACLKK 104
 
Name Accession Description Interval E-value
PRK11505 PRK11505
phosphate starvation-inducible protein PsiF;
9-97 9.60e-22

phosphate starvation-inducible protein PsiF;


Pssm-ID: 183165 [Multi-domain]  Cd Length: 106  Bit Score: 83.20  E-value: 9.60e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15600067    9 FVLAMAVSAHGFAATAQQEKMTACNAEATTKALKGDERKAFMSGCLK--AGAPAGGKATAQQEKMKSCNADASAKSLKGD 86
Cdd:PRK11505  13 LVFLTTVGAAERTLTPQQQRMTSCNQQATAQALKGDARKTYMSDCLKnsKSAPGEKSLTPQQQKMRECNNQATQQSLKGD 92

                         90
                 ....*....|.
gi 15600067   87 ERKAFMSSCLK 97
Cdd:PRK11505  93 DRNKFMSACLK 103
PRK11505 PRK11505
phosphate starvation-inducible protein PsiF;
65-138 9.31e-20

phosphate starvation-inducible protein PsiF;


Pssm-ID: 183165 [Multi-domain]  Cd Length: 106  Bit Score: 78.19  E-value: 9.31e-20
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 15600067   65 TAQQEKMKSCNADASAKSLKGDERKAFMSSCLK----AGGSAKAATQQEKMKTCNADATAKALKGDERKAFMSTCLKK 138
Cdd:PRK11505  27 TPQQQRMTSCNQQATAQALKGDARKTYMSDCLKnsksAPGEKSLTPQQQKMRECNNQATQQSLKGDDRNKFMSACLKK 104
PsiF_repeat pfam07769
psiF repeat; This region is approximately 35 residues long. It is found repeated in a number ...
 65-97 1.04e-11

psiF repeat; This region is approximately 35 residues long. It is found repeated in a number of putative phosphate starvation- inducible proteins expressed by various bacterial species. psiF is known to be an example of such phosphate starvation-inducible proteins.


Pssm-ID: 429650 [Multi-domain]  Cd Length: 34  Bit Score: 55.40  E-value: 1.04e-11
                          10        20        30
                  ....*....|....*....|....*....|...
gi 15600067    65 TAQQEKMKSCNADASAKSLKGDERKAFMSSCLK 97
Cdd:pfam07769   2 TAQQEKMKTCNAEAKGKALKGDERKAFMSSCLS 34
PsiF_repeat pfam07769
psiF repeat; This region is approximately 35 residues long. It is found repeated in a number ...
 105-137 2.11e-11

psiF repeat; This region is approximately 35 residues long. It is found repeated in a number of putative phosphate starvation- inducible proteins expressed by various bacterial species. psiF is known to be an example of such phosphate starvation-inducible proteins.


Pssm-ID: 429650 [Multi-domain]  Cd Length: 34  Bit Score: 54.63  E-value: 2.11e-11
                          10        20        30
                  ....*....|....*....|....*....|...
gi 15600067   105 ATQQEKMKTCNADATAKALKGDERKAFMSTCLK 137
Cdd:pfam07769   2 TAQQEKMKTCNAEAKGKALKGDERKAFMSSCLS 34
 
Name Accession Description Interval E-value
PRK11505 PRK11505
phosphate starvation-inducible protein PsiF;
9-97 9.60e-22

phosphate starvation-inducible protein PsiF;


Pssm-ID: 183165 [Multi-domain]  Cd Length: 106  Bit Score: 83.20  E-value: 9.60e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15600067    9 FVLAMAVSAHGFAATAQQEKMTACNAEATTKALKGDERKAFMSGCLK--AGAPAGGKATAQQEKMKSCNADASAKSLKGD 86
Cdd:PRK11505  13 LVFLTTVGAAERTLTPQQQRMTSCNQQATAQALKGDARKTYMSDCLKnsKSAPGEKSLTPQQQKMRECNNQATQQSLKGD 92

                         90
                 ....*....|.
gi 15600067   87 ERKAFMSSCLK 97
Cdd:PRK11505  93 DRNKFMSACLK 103
PRK11505 PRK11505
phosphate starvation-inducible protein PsiF;
65-138 9.31e-20

phosphate starvation-inducible protein PsiF;


Pssm-ID: 183165 [Multi-domain]  Cd Length: 106  Bit Score: 78.19  E-value: 9.31e-20
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 15600067   65 TAQQEKMKSCNADASAKSLKGDERKAFMSSCLK----AGGSAKAATQQEKMKTCNADATAKALKGDERKAFMSTCLKK 138
Cdd:PRK11505  27 TPQQQRMTSCNQQATAQALKGDARKTYMSDCLKnsksAPGEKSLTPQQQKMRECNNQATQQSLKGDDRNKFMSACLKK 104
PsiF_repeat pfam07769
psiF repeat; This region is approximately 35 residues long. It is found repeated in a number ...
 65-97 1.04e-11

psiF repeat; This region is approximately 35 residues long. It is found repeated in a number of putative phosphate starvation- inducible proteins expressed by various bacterial species. psiF is known to be an example of such phosphate starvation-inducible proteins.


Pssm-ID: 429650 [Multi-domain]  Cd Length: 34  Bit Score: 55.40  E-value: 1.04e-11
                          10        20        30
                  ....*....|....*....|....*....|...
gi 15600067    65 TAQQEKMKSCNADASAKSLKGDERKAFMSSCLK 97
Cdd:pfam07769   2 TAQQEKMKTCNAEAKGKALKGDERKAFMSSCLS 34
PsiF_repeat pfam07769
psiF repeat; This region is approximately 35 residues long. It is found repeated in a number ...
 105-137 2.11e-11

psiF repeat; This region is approximately 35 residues long. It is found repeated in a number of putative phosphate starvation- inducible proteins expressed by various bacterial species. psiF is known to be an example of such phosphate starvation-inducible proteins.


Pssm-ID: 429650 [Multi-domain]  Cd Length: 34  Bit Score: 54.63  E-value: 2.11e-11
                          10        20        30
                  ....*....|....*....|....*....|...
gi 15600067   105 ATQQEKMKTCNADATAKALKGDERKAFMSTCLK 137
Cdd:pfam07769   2 TAQQEKMKTCNAEAKGKALKGDERKAFMSSCLS 34
PsiF_repeat pfam07769
psiF repeat; This region is approximately 35 residues long. It is found repeated in a number ...
 23-55 4.67e-11

psiF repeat; This region is approximately 35 residues long. It is found repeated in a number of putative phosphate starvation- inducible proteins expressed by various bacterial species. psiF is known to be an example of such phosphate starvation-inducible proteins.


Pssm-ID: 429650 [Multi-domain]  Cd Length: 34  Bit Score: 53.86  E-value: 4.67e-11
                          10        20        30
                  ....*....|....*....|....*....|...
gi 15600067    23 TAQQEKMTACNAEATTKALKGDERKAFMSGCLK 55
Cdd:pfam07769   2 TAQQEKMKTCNAEAKGKALKGDERKAFMSSCLS 34
PRK11505 PRK11505
phosphate starvation-inducible protein PsiF;
23-58 6.93e-07

phosphate starvation-inducible protein PsiF;


Pssm-ID: 183165 [Multi-domain]  Cd Length: 106  Bit Score: 45.06  E-value: 6.93e-07
                         10        20        30
                 ....*....|....*....|....*....|....*.
gi 15600067   23 TAQQEKMTACNAEATTKALKGDERKAFMSGCLKAGA 58
Cdd:PRK11505  71 TPQQQKMRECNNQATQQSLKGDDRNKFMSACLKKAA 106
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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