|
Name |
Accession |
Description |
Interval |
E-value |
| PrmA |
pfam06325 |
Ribosomal protein L11 methyltransferase (PrmA); This family consists of several Ribosomal ... |
2-291 |
2.03e-135 |
|
Ribosomal protein L11 methyltransferase (PrmA); This family consists of several Ribosomal protein L11 methyltransferase (EC:2.1.1.-) sequences.
Pssm-ID: 428888 [Multi-domain] Cd Length: 294 Bit Score: 384.70 E-value: 2.03e-135
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15600043 2 PWLQVRLAITPEQAETYEDALLEVGAVSVTFMDA---EDQPIFEPDLGTTPLWSRTHLLALFEADTDETALLAHLALLTG 78
Cdd:pfam06325 1 TWLELSIHTTREAAEPVSNILEEFGALGVAIEDAdllEDRDIFEPGLGEERLWDEVRVKALFDEETDALELIAQLAELIG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15600043 79 G-DLPEHHVEEIADQDWERSWMDNFQPMRFGRRLWIVPSWHAAPE-PDAVNLLLDPGLAFGTGTHPTTALCLEWLDGQEL 156
Cdd:pfam06325 81 GlDSPKVTVEEVAEEDWARAWKKYFHPVRIGERLTIVPSWEDYPEnPDALNIELDPGMAFGTGTHPTTKLCLEALERLVK 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15600043 157 AGRQVLDFGCGSGILAIAALLLGAERAVGTDIDPQALEASRDNASRNGIEpARFPVYLPADLPQRQADVLVANILAGPLV 236
Cdd:pfam06325 161 PGESVLDVGCGSGILAIAALKLGAKKVVGVDIDPVAVRAAKENAELNGVE-ARLEVYLPGDLPKEKADVVVANILADPLI 239
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 15600043 237 SLAPQLTGLVRPGGLLALSGILAEQAEEVRAAYSAHFDLDPTAEREGWIRISGRR 291
Cdd:pfam06325 240 ELAPDIYALVKPGGYLILSGILKEQAQMVAEAYSQGFELITVEHREEWVCIVGKK 294
|
|
| PrmA |
COG2264 |
Ribosomal protein L11 methylase PrmA [Translation, ribosomal structure and biogenesis]; |
1-293 |
9.98e-118 |
|
Ribosomal protein L11 methylase PrmA [Translation, ribosomal structure and biogenesis];
Pssm-ID: 441865 [Multi-domain] Cd Length: 284 Bit Score: 339.46 E-value: 9.98e-118
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15600043 1 MPWLQVRLAITPEQAETYEDALLEVGAVSVTFMDAEDqpifepdlgttPLWSRTHLLALFEADTD-ETALLAHLALLTGG 79
Cdd:COG2264 1 MKWIELTITTPEEAAEALSDALEELGAEGVEIEDAPP-----------GLWERVGVKAYFPEDEDlEELLAALAEALGEL 69
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15600043 80 DLPEHHVEEIADQDWERSWMDNFQPMRFGRRLWIVPSWHAA-PEPDAVNLLLDPGLAFGTGTHPTTALCLEWLDGQELAG 158
Cdd:COG2264 70 GAPEITVEEVEEEDWVEEWKKYFKPIRVGDRLVIVPSWEEYePDPGEIVIEIDPGMAFGTGTHPTTRLCLEALEKLLKPG 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15600043 159 RQVLDFGCGSgilaiaalllgaERAVGTDIDPQALEASRDNASRNGIEpARFPVYLPADLPQRQADVLVANILAGPLVSL 238
Cdd:COG2264 150 KTVLDVGCGSgilaiaaaklgaKRVLAVDIDPVAVEAARENAELNGVE-DRIEVVLGDLLEDGPYDLVVANILANPLIEL 228
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 15600043 239 APQLTGLVRPGGLLALSGILAEQAEEVRAAYSAH-FDLDPTAEREGWIRISGRRRA 293
Cdd:COG2264 229 APDLAALLKPGGYLILSGILEEQADEVLAAYEAAgFELVERRERGEWVALVLRKKA 284
|
|
| prmA |
PRK00517 |
50S ribosomal protein L11 methyltransferase; |
1-292 |
1.16e-113 |
|
50S ribosomal protein L11 methyltransferase;
Pssm-ID: 234786 [Multi-domain] Cd Length: 250 Bit Score: 327.88 E-value: 1.16e-113
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15600043 1 MPWLQVRLAITPEQAETYEDALLEVGAVSvtfmDAEDQPIFEPDLGTtplwsrthllalfeadtdetallahlalltggd 80
Cdd:PRK00517 1 MKWIELTLNTTPEAAEALSDILMELGALA----ALANLAGLGLDLGE--------------------------------- 43
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15600043 81 lPEHHVEEIADQDWERSWMDNFQPMRFGRRLWIVPSWHAAPEPDAVNLLLDPGLAFGTGTHPTTALCLEWLDGQELAGRQ 160
Cdd:PRK00517 44 -PTYTIEEVEDEDWEREWKKYFHPIRIGDRLWIVPSWEDPPDPDEINIELDPGMAFGTGTHPTTRLCLEALEKLVLPGKT 122
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15600043 161 VLDFGCGSgilaiaalllgaERAVGTDIDPQALEASRDNASRNGIEparFPVYLPADLPqrQADVLVANILAGPLVSLAP 240
Cdd:PRK00517 123 VLDVGCGSgilaiaaaklgaKKVLAVDIDPQAVEAARENAELNGVE---LNVYLPQGDL--KADVIVANILANPLLELAP 197
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 15600043 241 QLTGLVRPGGLLALSGILAEQAEEVRAAYSAH-FDLDPTAEREGWIRISGRRR 292
Cdd:PRK00517 198 DLARLLKPGGRLILSGILEEQADEVLEAYEEAgFTLDEVLERGEWVALVGKKK 250
|
|
| prmA |
TIGR00406 |
ribosomal protein L11 methyltransferase; Ribosomal protein L11 methyltransferase is an ... |
3-285 |
2.65e-97 |
|
ribosomal protein L11 methyltransferase; Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis. [Protein synthesis, Ribosomal proteins: synthesis and modification]
Pssm-ID: 273061 Cd Length: 288 Bit Score: 287.89 E-value: 2.65e-97
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15600043 3 WLQVRLAITPEQAETYEDALLEVGAVSVTFMDAEDQPIFEPDL-GTTPLWSRTHLLALFEADTDETALLAHLALLTGGDL 81
Cdd:TIGR00406 1 WIEIRINTTKELAEATSDALEEAGAVGVTFEDDKDTIYFEPHLpGEKRLWGNLDVIALFDAETDMNNSVIPLLEAFCLDL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15600043 82 PEHHVEEI--ADQDWERSWMDNFQPMRFGRRLWIVPSWHAAPE-PDAVNLLLDPGLAFGTGTHPTTALCLEWLDGQELAG 158
Cdd:TIGR00406 81 GRNHKIEFdeFSKDWERAWKDNFHPVQFGKRFWICPSWRDVPSdEDALIIMLDPGLAFGTGTHPTTSLCLEWLEDLDLKD 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15600043 159 RQVLDFGCGSGILAIAALLLGAERAVGTDIDPQALEASRDNASRNGIEPaRFPVYLPA--DLPQRQADVLVANILAGPLV 236
Cdd:TIGR00406 161 KNVIDVGCGSGILSIAALKLGAAKVVGIDIDPLAVESARKNAELNQVSD-RLQVKLIYleQPIEGKADVIVANILAEVIK 239
|
250 260 270 280
....*....|....*....|....*....|....*....|....*....
gi 15600043 237 SLAPQLTGLVRPGGLLALSGILAEQAEEVRAAYSAHFDLDPTAEREGWI 285
Cdd:TIGR00406 240 ELYPQFSRLVKPGGWLILSGILETQAQSVCDAYEQGFTVVEIRQREEWC 288
|
|
| AdoMet_MTases |
cd02440 |
S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; ... |
161-259 |
2.80e-05 |
|
S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). There are at least five structurally distinct families of AdoMet-MTases, class I being the largest and most diverse. Within this class enzymes can be classified by different substrate specificities (small molecules, lipids, nucleic acids, etc.) and different target atoms for methylation (nitrogen, oxygen, carbon, sulfur, etc.).
Pssm-ID: 100107 [Multi-domain] Cd Length: 107 Bit Score: 42.42 E-value: 2.80e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15600043 161 VLDFGCGSGILAIAALLLGAERAVGTDIDPQALEASRDNASRNGIEPARF---PVYLPADLPQRQADVLVANILAGPLVS 237
Cdd:cd02440 2 VLDLGCGTGALALALASGPGARVTGVDISPVALELARKAAAALLADNVEVlkgDAEELPPEADESFDVIISDPPLHHLVE 81
|
90 100
....*....|....*....|....*.
gi 15600043 238 LAPQLTG----LVRPGGLLALSGILA 259
Cdd:cd02440 82 DLARFLEearrLLKPGGVLVLTLVLA 107
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| PrmA |
pfam06325 |
Ribosomal protein L11 methyltransferase (PrmA); This family consists of several Ribosomal ... |
2-291 |
2.03e-135 |
|
Ribosomal protein L11 methyltransferase (PrmA); This family consists of several Ribosomal protein L11 methyltransferase (EC:2.1.1.-) sequences.
Pssm-ID: 428888 [Multi-domain] Cd Length: 294 Bit Score: 384.70 E-value: 2.03e-135
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15600043 2 PWLQVRLAITPEQAETYEDALLEVGAVSVTFMDA---EDQPIFEPDLGTTPLWSRTHLLALFEADTDETALLAHLALLTG 78
Cdd:pfam06325 1 TWLELSIHTTREAAEPVSNILEEFGALGVAIEDAdllEDRDIFEPGLGEERLWDEVRVKALFDEETDALELIAQLAELIG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15600043 79 G-DLPEHHVEEIADQDWERSWMDNFQPMRFGRRLWIVPSWHAAPE-PDAVNLLLDPGLAFGTGTHPTTALCLEWLDGQEL 156
Cdd:pfam06325 81 GlDSPKVTVEEVAEEDWARAWKKYFHPVRIGERLTIVPSWEDYPEnPDALNIELDPGMAFGTGTHPTTKLCLEALERLVK 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15600043 157 AGRQVLDFGCGSGILAIAALLLGAERAVGTDIDPQALEASRDNASRNGIEpARFPVYLPADLPQRQADVLVANILAGPLV 236
Cdd:pfam06325 161 PGESVLDVGCGSGILAIAALKLGAKKVVGVDIDPVAVRAAKENAELNGVE-ARLEVYLPGDLPKEKADVVVANILADPLI 239
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 15600043 237 SLAPQLTGLVRPGGLLALSGILAEQAEEVRAAYSAHFDLDPTAEREGWIRISGRR 291
Cdd:pfam06325 240 ELAPDIYALVKPGGYLILSGILKEQAQMVAEAYSQGFELITVEHREEWVCIVGKK 294
|
|
| PrmA |
COG2264 |
Ribosomal protein L11 methylase PrmA [Translation, ribosomal structure and biogenesis]; |
1-293 |
9.98e-118 |
|
Ribosomal protein L11 methylase PrmA [Translation, ribosomal structure and biogenesis];
Pssm-ID: 441865 [Multi-domain] Cd Length: 284 Bit Score: 339.46 E-value: 9.98e-118
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15600043 1 MPWLQVRLAITPEQAETYEDALLEVGAVSVTFMDAEDqpifepdlgttPLWSRTHLLALFEADTD-ETALLAHLALLTGG 79
Cdd:COG2264 1 MKWIELTITTPEEAAEALSDALEELGAEGVEIEDAPP-----------GLWERVGVKAYFPEDEDlEELLAALAEALGEL 69
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15600043 80 DLPEHHVEEIADQDWERSWMDNFQPMRFGRRLWIVPSWHAA-PEPDAVNLLLDPGLAFGTGTHPTTALCLEWLDGQELAG 158
Cdd:COG2264 70 GAPEITVEEVEEEDWVEEWKKYFKPIRVGDRLVIVPSWEEYePDPGEIVIEIDPGMAFGTGTHPTTRLCLEALEKLLKPG 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15600043 159 RQVLDFGCGSgilaiaalllgaERAVGTDIDPQALEASRDNASRNGIEpARFPVYLPADLPQRQADVLVANILAGPLVSL 238
Cdd:COG2264 150 KTVLDVGCGSgilaiaaaklgaKRVLAVDIDPVAVEAARENAELNGVE-DRIEVVLGDLLEDGPYDLVVANILANPLIEL 228
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 15600043 239 APQLTGLVRPGGLLALSGILAEQAEEVRAAYSAH-FDLDPTAEREGWIRISGRRRA 293
Cdd:COG2264 229 APDLAALLKPGGYLILSGILEEQADEVLAAYEAAgFELVERRERGEWVALVLRKKA 284
|
|
| prmA |
PRK00517 |
50S ribosomal protein L11 methyltransferase; |
1-292 |
1.16e-113 |
|
50S ribosomal protein L11 methyltransferase;
Pssm-ID: 234786 [Multi-domain] Cd Length: 250 Bit Score: 327.88 E-value: 1.16e-113
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15600043 1 MPWLQVRLAITPEQAETYEDALLEVGAVSvtfmDAEDQPIFEPDLGTtplwsrthllalfeadtdetallahlalltggd 80
Cdd:PRK00517 1 MKWIELTLNTTPEAAEALSDILMELGALA----ALANLAGLGLDLGE--------------------------------- 43
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15600043 81 lPEHHVEEIADQDWERSWMDNFQPMRFGRRLWIVPSWHAAPEPDAVNLLLDPGLAFGTGTHPTTALCLEWLDGQELAGRQ 160
Cdd:PRK00517 44 -PTYTIEEVEDEDWEREWKKYFHPIRIGDRLWIVPSWEDPPDPDEINIELDPGMAFGTGTHPTTRLCLEALEKLVLPGKT 122
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15600043 161 VLDFGCGSgilaiaalllgaERAVGTDIDPQALEASRDNASRNGIEparFPVYLPADLPqrQADVLVANILAGPLVSLAP 240
Cdd:PRK00517 123 VLDVGCGSgilaiaaaklgaKKVLAVDIDPQAVEAARENAELNGVE---LNVYLPQGDL--KADVIVANILANPLLELAP 197
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 15600043 241 QLTGLVRPGGLLALSGILAEQAEEVRAAYSAH-FDLDPTAEREGWIRISGRRR 292
Cdd:PRK00517 198 DLARLLKPGGRLILSGILEEQADEVLEAYEEAgFTLDEVLERGEWVALVGKKK 250
|
|
| prmA |
TIGR00406 |
ribosomal protein L11 methyltransferase; Ribosomal protein L11 methyltransferase is an ... |
3-285 |
2.65e-97 |
|
ribosomal protein L11 methyltransferase; Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis. [Protein synthesis, Ribosomal proteins: synthesis and modification]
Pssm-ID: 273061 Cd Length: 288 Bit Score: 287.89 E-value: 2.65e-97
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15600043 3 WLQVRLAITPEQAETYEDALLEVGAVSVTFMDAEDQPIFEPDL-GTTPLWSRTHLLALFEADTDETALLAHLALLTGGDL 81
Cdd:TIGR00406 1 WIEIRINTTKELAEATSDALEEAGAVGVTFEDDKDTIYFEPHLpGEKRLWGNLDVIALFDAETDMNNSVIPLLEAFCLDL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15600043 82 PEHHVEEI--ADQDWERSWMDNFQPMRFGRRLWIVPSWHAAPE-PDAVNLLLDPGLAFGTGTHPTTALCLEWLDGQELAG 158
Cdd:TIGR00406 81 GRNHKIEFdeFSKDWERAWKDNFHPVQFGKRFWICPSWRDVPSdEDALIIMLDPGLAFGTGTHPTTSLCLEWLEDLDLKD 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15600043 159 RQVLDFGCGSGILAIAALLLGAERAVGTDIDPQALEASRDNASRNGIEPaRFPVYLPA--DLPQRQADVLVANILAGPLV 236
Cdd:TIGR00406 161 KNVIDVGCGSGILSIAALKLGAAKVVGIDIDPLAVESARKNAELNQVSD-RLQVKLIYleQPIEGKADVIVANILAEVIK 239
|
250 260 270 280
....*....|....*....|....*....|....*....|....*....
gi 15600043 237 SLAPQLTGLVRPGGLLALSGILAEQAEEVRAAYSAHFDLDPTAEREGWI 285
Cdd:TIGR00406 240 ELYPQFSRLVKPGGWLILSGILETQAQSVCDAYEQGFTVVEIRQREEWC 288
|
|
| SmtA |
COG0500 |
SAM-dependent methyltransferase [Secondary metabolites biosynthesis, transport and catabolism, ... |
157-263 |
6.42e-07 |
|
SAM-dependent methyltransferase [Secondary metabolites biosynthesis, transport and catabolism, General function prediction only];
Pssm-ID: 440266 [Multi-domain] Cd Length: 199 Bit Score: 48.76 E-value: 6.42e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15600043 157 AGRQVLDFGCGSGILAIAALLLGAERAVGTDIDPQALEASRDNASRNGIEPARF---PVYLPADLPQRQADVLVAN---- 229
Cdd:COG0500 26 KGGRVLDLGCGTGRNLLALAARFGGRVIGIDLSPEAIALARARAAKAGLGNVEFlvaDLAELDPLPAESFDLVVAFgvlh 105
|
90 100 110
....*....|....*....|....*....|....*
gi 15600043 230 -ILAGPLVSLAPQLTGLVRPGGLLALSGILAEQAE 263
Cdd:COG0500 106 hLPPEEREALLRELARALKPGGVLLLSASDAAAAL 140
|
|
| UbiG |
COG2227 |
2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme transport and ... |
149-255 |
1.08e-06 |
|
2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme transport and metabolism]; 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase is part of the Pathway/BioSystem: Ubiquinone biosynthesis
Pssm-ID: 441829 [Multi-domain] Cd Length: 126 Bit Score: 46.93 E-value: 1.08e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15600043 149 EWLDGQELAGRQVLDFGCGSGILAIAALLLGAeRAVGTDIDPQALEASRDNASRNGIEparfpvYLPAD-----LPQRQA 223
Cdd:COG2227 16 ALLARLLPAGGRVLDVGCGTGRLALALARRGA-DVTGVDISPEALEIARERAAELNVD------FVQGDledlpLEDGSF 88
|
90 100 110
....*....|....*....|....*....|....*.
gi 15600043 224 DVLVANI----LAGPLVSLApQLTGLVRPGGLLALS 255
Cdd:COG2227 89 DLVICSEvlehLPDPAALLR-ELARLLKPGGLLLLS 123
|
|
| MTS |
pfam05175 |
Methyltransferase small domain; This domain is found in ribosomal RNA small subunit ... |
130-229 |
2.82e-06 |
|
Methyltransferase small domain; This domain is found in ribosomal RNA small subunit methyltransferase C as well as other methyltransferases.
Pssm-ID: 428349 [Multi-domain] Cd Length: 170 Bit Score: 46.43 E-value: 2.82e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15600043 130 LDPGlafgtgthptTALCLEWLDgqELAGRQVLDFGCGSGILAIAALLLGAERAV-GTDIDPQALEASRDNASRNGIEPA 208
Cdd:pfam05175 16 LDIG----------SRLLLEHLP--KDLSGKVLDLGCGAGVLGAALAKESPDAELtMVDINARALESARENLAANGLENG 83
|
90 100
....*....|....*....|..
gi 15600043 209 RF-PVYLPADLPQRQADVLVAN 229
Cdd:pfam05175 84 EVvASDVYSGVEDGKFDLIISN 105
|
|
| Nnt1 |
COG3897 |
Protein N-terminal and lysine N-methylase, NNT1/EFM7 family [Posttranslational modification, ... |
151-228 |
1.05e-05 |
|
Protein N-terminal and lysine N-methylase, NNT1/EFM7 family [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443104 [Multi-domain] Cd Length: 216 Bit Score: 45.65 E-value: 1.05e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15600043 151 LDGQELAGRQVLDFGCGSGILAIAALLLGAERAVGTDIDPQALEASRDNASRNGIEPArfpvYLPADL----PQRQADVL 226
Cdd:COG3897 64 LDHPEVAGKRVLELGCGLGLVGIAAAKAGAADVTATDYDPEALAALRLNAALNGVAIT----TRLGDWrdppAAGGFDLI 139
|
..
gi 15600043 227 VA 228
Cdd:COG3897 140 LG 141
|
|
| RsmC |
COG2813 |
16S rRNA G1207 methylase RsmC [Translation, ribosomal structure and biogenesis]; 16S rRNA ... |
130-229 |
2.52e-05 |
|
16S rRNA G1207 methylase RsmC [Translation, ribosomal structure and biogenesis]; 16S rRNA G1207 methylase RsmC is part of the Pathway/BioSystem: 16S rRNA modification
Pssm-ID: 442062 [Multi-domain] Cd Length: 191 Bit Score: 44.03 E-value: 2.52e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15600043 130 LDPGlafgtgthptTALCLEWLDgQELAGRqVLDFGCGSGILAIAALLLGAERAV-GTDIDPQALEASRDNASRNGIEPA 208
Cdd:COG2813 34 LDIG----------TRLLLEHLP-EPLGGR-VLDLGCGYGVIGLALAKRNPEARVtLVDVNARAVELARANAAANGLENV 101
|
90 100
....*....|....*....|....
gi 15600043 209 RFpvYLP---ADLPQRQADVLVAN 229
Cdd:COG2813 102 EV--LWSdglSGVPDGSFDLILSN 123
|
|
| AdoMet_MTases |
cd02440 |
S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; ... |
161-259 |
2.80e-05 |
|
S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). There are at least five structurally distinct families of AdoMet-MTases, class I being the largest and most diverse. Within this class enzymes can be classified by different substrate specificities (small molecules, lipids, nucleic acids, etc.) and different target atoms for methylation (nitrogen, oxygen, carbon, sulfur, etc.).
Pssm-ID: 100107 [Multi-domain] Cd Length: 107 Bit Score: 42.42 E-value: 2.80e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15600043 161 VLDFGCGSGILAIAALLLGAERAVGTDIDPQALEASRDNASRNGIEPARF---PVYLPADLPQRQADVLVANILAGPLVS 237
Cdd:cd02440 2 VLDLGCGTGALALALASGPGARVTGVDISPVALELARKAAAALLADNVEVlkgDAEELPPEADESFDVIISDPPLHHLVE 81
|
90 100
....*....|....*....|....*.
gi 15600043 238 LAPQLTG----LVRPGGLLALSGILA 259
Cdd:cd02440 82 DLARFLEearrLLKPGGVLVLTLVLA 107
|
|
| Tam |
COG4106 |
Trans-aconitate methyltransferase [Energy production and conversion]; |
157-255 |
2.82e-05 |
|
Trans-aconitate methyltransferase [Energy production and conversion];
Pssm-ID: 443282 [Multi-domain] Cd Length: 100 Bit Score: 42.12 E-value: 2.82e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15600043 157 AGRQVLDFGCGS-GILAIAALLLGAERAVGTDIDPQALEASRDNASRngiepARFpvyLPADL----PQRQADVLVAN-I 230
Cdd:COG4106 1 PPRRVLDLGCGTgRLTALLAERFPGARVTGVDLSPEMLARARARLPN-----VRF---VVADLrdldPPEPFDLVVSNaA 72
|
90 100
....*....|....*....|....*..
gi 15600043 231 L--AGPLVSLAPQLTGLVRPGGLLALS 255
Cdd:COG4106 73 LhwLPDHAALLARLAAALAPGGVLAVQ 99
|
|
| Methyltransf_12 |
pfam08242 |
Methyltransferase domain; Members of this family are SAM dependent methyltransferases. |
162-252 |
7.18e-05 |
|
Methyltransferase domain; Members of this family are SAM dependent methyltransferases.
Pssm-ID: 400515 [Multi-domain] Cd Length: 98 Bit Score: 40.81 E-value: 7.18e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15600043 162 LDFGCGS-GILAIAALLLGAERAVGTDIDPQALEASRDNASRNGIEPA---RFPVYLPADLPQRQADVLVANIL---AGP 234
Cdd:pfam08242 1 LEIGCGTgTLLRALLEALPGLEYTGLDISPAALEAARERLAALGLLNAvrvELFQLDLGELDPGSFDVVVASNVlhhLAD 80
|
90
....*....|....*...
gi 15600043 235 LVSLAPQLTGLVRPGGLL 252
Cdd:pfam08242 81 PRAVLRNIRRLLKPGGVL 98
|
|
| Methyltransf_31 |
pfam13847 |
Methyltransferase domain; This family appears to have methyltransferase activity. |
161-267 |
1.46e-04 |
|
Methyltransferase domain; This family appears to have methyltransferase activity.
Pssm-ID: 463998 [Multi-domain] Cd Length: 150 Bit Score: 41.25 E-value: 1.46e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15600043 161 VLDFGCGSGILAIAALLLGAERA--VGTDIDPQALEASRDNASRNGIEPARFPV----YLPADLPQRQADVLVANILAGP 234
Cdd:pfam13847 7 VLDLGCGTGHLSFELAEELGPNAevVGIDISEEAIEKARENAQKLGFDNVEFEQgdieELPELLEDDKFDVVISNCVLNH 86
|
90 100 110
....*....|....*....|....*....|....*...
gi 15600043 235 LVSLAPQLTG---LVRPGGLLALS--GILAEQAEEVRA 267
Cdd:pfam13847 87 IPDPDKVLQEilrVLKPGGRLIISdpDSLAELPAHVKE 124
|
|
| TrmA |
COG2265 |
tRNA/tmRNA/rRNA uracil-C5-methylase, TrmA/RlmC/RlmD family [Translation, ribosomal structure ... |
148-229 |
6.96e-04 |
|
tRNA/tmRNA/rRNA uracil-C5-methylase, TrmA/RlmC/RlmD family [Translation, ribosomal structure and biogenesis]; tRNA/tmRNA/rRNA uracil-C5-methylase, TrmA/RlmC/RlmD family is part of the Pathway/BioSystem: tRNA modification
Pssm-ID: 441866 [Multi-domain] Cd Length: 377 Bit Score: 40.54 E-value: 6.96e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15600043 148 LEWLDgqELAGRQVLDFGCG--------SgilaiaallLGAERAVGTDIDPQALEASRDNASRNGIEPARFPV-----YL 214
Cdd:COG2265 226 LEWLD--LTGGERVLDLYCGvgtfalplA---------RRAKKVIGVEIVPEAVEDARENARLNGLKNVEFVAgdleeVL 294
|
90
....*....|....*
gi 15600043 215 PADLPQRQADVLVAN 229
Cdd:COG2265 295 PELLWGGRPDVVVLD 309
|
|
| PRK09328 |
PRK09328 |
N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; Provisional |
184-272 |
7.77e-04 |
|
N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; Provisional
Pssm-ID: 236467 [Multi-domain] Cd Length: 275 Bit Score: 40.15 E-value: 7.77e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15600043 184 VGTDIDPQALEASRDNASRNGIEPARFpvyLPAD----LPQRQADVLVAN----------ILAG------PLVSL----- 238
Cdd:PRK09328 136 TAVDISPEALAVARRNAKHGLGARVEF---LQGDwfepLPGGRFDLIVSNppyipeadihLLQPevrdhePHLALfgged 212
|
90 100 110 120
....*....|....*....|....*....|....*....|..
gi 15600043 239 --------APQLTGLVRPGGLLALSgILAEQAEEVRAAYSAH 272
Cdd:PRK09328 213 gldfyrriIEQAPRYLKPGGWLLLE-IGYDQGEAVRALLAAA 253
|
|
| PRK14968 |
PRK14968 |
putative methyltransferase; Provisional |
157-218 |
4.22e-03 |
|
putative methyltransferase; Provisional
Pssm-ID: 237872 [Multi-domain] Cd Length: 188 Bit Score: 37.57 E-value: 4.22e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 15600043 157 AGRQVLDFGCGSGILAIAALLLGaERAVGTDIDPQALEASRDNASRNGIEPARFPVYLpADL 218
Cdd:PRK14968 23 KGDRVLEVGTGSGIVAIVAAKNG-KKVVGVDINPYAVECAKCNAKLNNIRNNGVEVIR-SDL 82
|
|
| COG2263 |
COG2263 |
Predicted RNA methylase [General function prediction only]; |
156-204 |
4.57e-03 |
|
Predicted RNA methylase [General function prediction only];
Pssm-ID: 441864 [Multi-domain] Cd Length: 199 Bit Score: 37.58 E-value: 4.57e-03
10 20 30 40
....*....|....*....|....*....|....*....|....*....
gi 15600043 156 LAGRQVLDFGCGSGILAIAALLLGAERAVGTDIDPQALEASRDNASRNG 204
Cdd:COG2263 44 IEGKTVLDLGCGTGMLAIGAALLGAKKVVGVDIDPEALEIARENAERLG 92
|
|
| Methyltransf_25 |
pfam13649 |
Methyltransferase domain; This family appears to be a methyltransferase domain. |
161-205 |
6.79e-03 |
|
Methyltransferase domain; This family appears to be a methyltransferase domain.
Pssm-ID: 463945 [Multi-domain] Cd Length: 96 Bit Score: 35.23 E-value: 6.79e-03
10 20 30 40
....*....|....*....|....*....|....*....|....*
gi 15600043 161 VLDFGCGSGILAIAALLLGAERAVGTDIDPQALEASRDNASRNGI 205
Cdd:pfam13649 1 VLDLGCGTGRLTLALARRGGARVTGVDLSPEMLERARERAAEAGL 45
|
|
| |
