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Conserved domains on  [gi|15599285|ref|NP_252779|]
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hypothetical protein PA4090 [Pseudomonas aeruginosa PAO1]

Protein Classification

DUF2218 domain-containing protein( domain architecture ID 10007548)

DUF2218 domain-containing protein resembles the C-terminal domain of phosphoglucomutase 1

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
COG3553 COG3553
Uncharacterized conserved protein, DUF2218 domain [Function unknown];
1-94 1.70e-40

Uncharacterized conserved protein, DUF2218 domain [Function unknown];


:

Pssm-ID: 442774  Cd Length: 94  Bit Score: 128.84  E-value: 1.70e-40
                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599285  1 MFRSTSHVRTESAARYVNRLCKHWGHKFEVELTPERGFIDFGDSNCELLAHPDHVLMILNSPDEDSLAHMQNVVADHLQR 80
Cdd:COG3553  1 MLTSTARVATDNASRYLKQLCKHFAHKVPVEFDETQGRIAFPFGTCTLTADDDALTLRLEAEDAEQLERLEDVVARHLDR 80

                       90
               ....*....|....
gi 15599285 81 MANSESLEIAWQPA 94
Cdd:COG3553 81 FAFREELTVDWQRA 94
 
Name Accession Description Interval E-value
COG3553 COG3553
Uncharacterized conserved protein, DUF2218 domain [Function unknown];
1-94 1.70e-40

Uncharacterized conserved protein, DUF2218 domain [Function unknown];


Pssm-ID: 442774  Cd Length: 94  Bit Score: 128.84  E-value: 1.70e-40
                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599285  1 MFRSTSHVRTESAARYVNRLCKHWGHKFEVELTPERGFIDFGDSNCELLAHPDHVLMILNSPDEDSLAHMQNVVADHLQR 80
Cdd:COG3553  1 MLTSTARVATDNASRYLKQLCKHFAHKVPVEFDETQGRIAFPFGTCTLTADDDALTLRLEAEDAEQLERLEDVVARHLDR 80

                       90
               ....*....|....
gi 15599285 81 MANSESLEIAWQPA 94
Cdd:COG3553 81 FAFREELTVDWQRA 94
DUF2218 pfam09981
Uncharacterized protein conserved in bacteria (DUF2218); This domain, found in various ...
 5-92 6.08e-36

Uncharacterized protein conserved in bacteria (DUF2218); This domain, found in various hypothetical bacterial proteins, has no known function.


Pssm-ID: 430963  Cd Length: 88  Bit Score: 116.91  E-value: 6.08e-36
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599285    5 TSHVRTESAARYVNRLCKHWGHKFEVELTPERGFIDFGDSNCELLAHPDHVLMILNSPDEDSLAHMQNVVADHLQRMANS 84
Cdd:pfam09981  1 TARVATPHASRYLKQLCKHFAHKVPVEFDEETGRVTFPFGTCTLTAEPDALTLRVEAEDAEDLARLKDVVARHLDRFAFR 80


                 ....*...
gi 15599285   85 ESLEIAWQ 92
Cdd:pfam09981 81 EELDVVWQ 88
 
Name Accession Description Interval E-value
COG3553 COG3553
Uncharacterized conserved protein, DUF2218 domain [Function unknown];
1-94 1.70e-40

Uncharacterized conserved protein, DUF2218 domain [Function unknown];


Pssm-ID: 442774  Cd Length: 94  Bit Score: 128.84  E-value: 1.70e-40
                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599285  1 MFRSTSHVRTESAARYVNRLCKHWGHKFEVELTPERGFIDFGDSNCELLAHPDHVLMILNSPDEDSLAHMQNVVADHLQR 80
Cdd:COG3553  1 MLTSTARVATDNASRYLKQLCKHFAHKVPVEFDETQGRIAFPFGTCTLTADDDALTLRLEAEDAEQLERLEDVVARHLDR 80

                       90
               ....*....|....
gi 15599285 81 MANSESLEIAWQPA 94
Cdd:COG3553 81 FAFREELTVDWQRA 94
DUF2218 pfam09981
Uncharacterized protein conserved in bacteria (DUF2218); This domain, found in various ...
 5-92 6.08e-36

Uncharacterized protein conserved in bacteria (DUF2218); This domain, found in various hypothetical bacterial proteins, has no known function.


Pssm-ID: 430963  Cd Length: 88  Bit Score: 116.91  E-value: 6.08e-36
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599285    5 TSHVRTESAARYVNRLCKHWGHKFEVELTPERGFIDFGDSNCELLAHPDHVLMILNSPDEDSLAHMQNVVADHLQRMANS 84
Cdd:pfam09981  1 TARVATPHASRYLKQLCKHFAHKVPVEFDEETGRVTFPFGTCTLTAEPDALTLRVEAEDAEDLARLKDVVARHLDRFAFR 80


                 ....*...
gi 15599285   85 ESLEIAWQ 92
Cdd:pfam09981 81 EELDVVWQ 88
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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