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Conserved domains on  [gi|15595831|ref|NP_249325|]
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hypothetical protein PA0634 [Pseudomonas aeruginosa PAO1]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Phage_TAC_13 super family cl24882
Phage tail assembly chaperone, TAC; This family represents the phage-tail assembly chaperone ...
 4-107 8.51e-24

Phage tail assembly chaperone, TAC; This family represents the phage-tail assembly chaperone proteins from a small set of Siphoviridae from Gammaproteobacteria. TACs are required for the morphogenesis of all long-tailed phages. The proposed function for the TAC is to coat the tape-measure protein to prevent it from forming unproductive complexes or precipitating before the tail tube protein has been incorporated.


The actual alignment was detected with superfamily member pfam16459:

Pssm-ID: 406779  Cd Length: 98  Bit Score: 87.36  E-value: 8.51e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15595831     4 NELRAAGGFIeSALVRKEITWTRvpagrKKAVSDTFQVFVRRNSFGAVERLFSAEGDQQSRNARYLAECIRlGETGEESL 83
Cdd:pfam16459   1 ASLKKAGGFV-GAPVEKEITWKH-----GNGETETATVYIRRLSFGVAEALFKAMNGKEDKVAGRIAASIC-DEKGKPVF 73

                          90       100
                  ....*....|....*....|....*
gi 15595831    84 TYEQAY-DLDPALGFLLLQAVGEVN 107
Cdd:pfam16459  74 TEDDITgNLDPSLGIALLNAINEVN 98
 
Name Accession Description Interval E-value
Phage_TAC_13 pfam16459
Phage tail assembly chaperone, TAC; This family represents the phage-tail assembly chaperone ...
 4-107 8.51e-24

Phage tail assembly chaperone, TAC; This family represents the phage-tail assembly chaperone proteins from a small set of Siphoviridae from Gammaproteobacteria. TACs are required for the morphogenesis of all long-tailed phages. The proposed function for the TAC is to coat the tape-measure protein to prevent it from forming unproductive complexes or precipitating before the tail tube protein has been incorporated.


Pssm-ID: 406779  Cd Length: 98  Bit Score: 87.36  E-value: 8.51e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15595831     4 NELRAAGGFIeSALVRKEITWTRvpagrKKAVSDTFQVFVRRNSFGAVERLFSAEGDQQSRNARYLAECIRlGETGEESL 83
Cdd:pfam16459   1 ASLKKAGGFV-GAPVEKEITWKH-----GNGETETATVYIRRLSFGVAEALFKAMNGKEDKVAGRIAASIC-DEKGKPVF 73

                          90       100
                  ....*....|....*....|....*
gi 15595831    84 TYEQAY-DLDPALGFLLLQAVGEVN 107
Cdd:pfam16459  74 TEDDITgNLDPSLGIALLNAINEVN 98
 
Name Accession Description Interval E-value
Phage_TAC_13 pfam16459
Phage tail assembly chaperone, TAC; This family represents the phage-tail assembly chaperone ...
 4-107 8.51e-24

Phage tail assembly chaperone, TAC; This family represents the phage-tail assembly chaperone proteins from a small set of Siphoviridae from Gammaproteobacteria. TACs are required for the morphogenesis of all long-tailed phages. The proposed function for the TAC is to coat the tape-measure protein to prevent it from forming unproductive complexes or precipitating before the tail tube protein has been incorporated.


Pssm-ID: 406779  Cd Length: 98  Bit Score: 87.36  E-value: 8.51e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15595831     4 NELRAAGGFIeSALVRKEITWTRvpagrKKAVSDTFQVFVRRNSFGAVERLFSAEGDQQSRNARYLAECIRlGETGEESL 83
Cdd:pfam16459   1 ASLKKAGGFV-GAPVEKEITWKH-----GNGETETATVYIRRLSFGVAEALFKAMNGKEDKVAGRIAASIC-DEKGKPVF 73

                          90       100
                  ....*....|....*....|....*
gi 15595831    84 TYEQAY-DLDPALGFLLLQAVGEVN 107
Cdd:pfam16459  74 TEDDITgNLDPSLGIALLNAINEVN 98
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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