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Conserved domains on  [gi|119167454|ref|NP_248833|]
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nonspecific ribonucleoside hydrolase [Pseudomonas aeruginosa PAO1]

Protein Classification

nucleoside hydrolase( domain architecture ID 10005011)

nucleoside hydrolase similar to Arabidopsis thaliana uridine nucleosidase 1, which is involved in pyrimidine breakdown rather than in pyrimidine salvage

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
URH1 COG1957
Inosine-uridine nucleoside N-ribohydrolase [Nucleotide transport and metabolism]; ...
38-349 8.20e-149

Inosine-uridine nucleoside N-ribohydrolase [Nucleotide transport and metabolism]; Inosine-uridine nucleoside N-ribohydrolase is part of the Pathway/BioSystem: Pyrimidine salvage


:

Pssm-ID: 441560 [Multi-domain]  Cd Length: 310  Bit Score: 421.48  E-value: 8.20e-149
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119167454  38 SPRTLIIDTDPGADDVIALLFAMASPkELKIQALTTVAGNVPLEKTARNARLAREWGKRPDIPVYAGAPRPLLRTPIYAA 117
Cdd:COG1957    1 MMRKVIIDTDPGIDDALALLLALASP-EIDLLGITTVAGNVPLEQTTRNALKLLELAGRTDVPVAAGAARPLVRPLVTAE 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119167454 118 DVHGSEGISGVEVHEPKQPLAEGNAVDYLIRTLRAAPEKsVTLAMLGPETNLALALTQAPDIVKGVREIVIMGGAHFNGG 197
Cdd:COG1957   80 HVHGEDGLGGVDLPEPTRPPEPEHAVDFIIETLRAAPGE-VTLVALGPLTNLALALRKDPELAERIKRIVIMGGAFFVPG 158
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119167454 198 NITPAAEFNIFADPHAAEIVLKSGAPITMLPLDVTHKILTSPERIAKLRNLGNQAGKTVADILDAYVQYDIKYYGLKGGP 277
Cdd:COG1957  159 NVTPVAEFNIYVDPEAAKIVFASGIPITMVGLDVTHQALLTPEDLARLAALGTPLGRFLADLLDFYLDFYRERYGLDGCP 238
                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 119167454 278 VHDATVVAYLLKPSLFKGKRINVQVDSREGITFGQTVADWYGGLKQPANVEWINEGDAQGFFDLLTERIARL 349
Cdd:COG1957  239 LHDPLAVAYLLDPELFTTRPAPVDVETDGELTRGQTVVDWRGVTGRPPNARVALDVDAERFLDLLLERLARL 310
 
Name Accession Description Interval E-value
URH1 COG1957
Inosine-uridine nucleoside N-ribohydrolase [Nucleotide transport and metabolism]; ...
38-349 8.20e-149

Inosine-uridine nucleoside N-ribohydrolase [Nucleotide transport and metabolism]; Inosine-uridine nucleoside N-ribohydrolase is part of the Pathway/BioSystem: Pyrimidine salvage


Pssm-ID: 441560 [Multi-domain]  Cd Length: 310  Bit Score: 421.48  E-value: 8.20e-149
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119167454  38 SPRTLIIDTDPGADDVIALLFAMASPkELKIQALTTVAGNVPLEKTARNARLAREWGKRPDIPVYAGAPRPLLRTPIYAA 117
Cdd:COG1957    1 MMRKVIIDTDPGIDDALALLLALASP-EIDLLGITTVAGNVPLEQTTRNALKLLELAGRTDVPVAAGAARPLVRPLVTAE 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119167454 118 DVHGSEGISGVEVHEPKQPLAEGNAVDYLIRTLRAAPEKsVTLAMLGPETNLALALTQAPDIVKGVREIVIMGGAHFNGG 197
Cdd:COG1957   80 HVHGEDGLGGVDLPEPTRPPEPEHAVDFIIETLRAAPGE-VTLVALGPLTNLALALRKDPELAERIKRIVIMGGAFFVPG 158
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119167454 198 NITPAAEFNIFADPHAAEIVLKSGAPITMLPLDVTHKILTSPERIAKLRNLGNQAGKTVADILDAYVQYDIKYYGLKGGP 277
Cdd:COG1957  159 NVTPVAEFNIYVDPEAAKIVFASGIPITMVGLDVTHQALLTPEDLARLAALGTPLGRFLADLLDFYLDFYRERYGLDGCP 238
                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 119167454 278 VHDATVVAYLLKPSLFKGKRINVQVDSREGITFGQTVADWYGGLKQPANVEWINEGDAQGFFDLLTERIARL 349
Cdd:COG1957  239 LHDPLAVAYLLDPELFTTRPAPVDVETDGELTRGQTVVDWRGVTGRPPNARVALDVDAERFLDLLLERLARL 310
nuc_hydro_IU_UC_XIUA cd02651
nuc_hydro_IU_UC_XIUA: inosine-uridine preferring, ...
42-346 1.45e-147

nuc_hydro_IU_UC_XIUA: inosine-uridine preferring, xanthosine-inosine-uridine-adenosine-preferring and, uridine-cytidine preferring nucleoside hydrolases. Nucleoside hydrolases cleave the N-glycosidic bond in nucleosides generating ribose and the respective base. These enzymes vary in their substrate specificity. This group contains proteins similar to nucleoside hydrolases which hydrolyze both pyrimidine and purine ribonucleosides: the inosine-uridine preferring nucleoside hydrolase from Crithidia fasciculata, the inosine-uridine-xanthosine preferring nucleoside hydrolase RihC from Escherichia coli and the xanthosine-inosine-uridine-adenosine-preferring nucleoside hydrolase RihC from Salmonella enterica serovar Typhimurium. This group also contains proteins similar to the pyrimidine-specific uridine-cytidine preferring nucleoside hydrolases URH1 from Saccharomyces cerevisiae, E. coli RihA and E. coli RihB. E. coli RihA is equally efficient with uridine and cytidine, E. coli RihB prefers cytidine over uridine. S. cerevisiae URH1 prefers uridine over cytidine.


Pssm-ID: 239117 [Multi-domain]  Cd Length: 302  Bit Score: 418.10  E-value: 1.45e-147
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119167454  42 LIIDTDPGADDVIALLFAMASPkELKIQALTTVAGNVPLEKTARNARLAREWGKRPDIPVYAGAPRPLLRTPIYAADVHG 121
Cdd:cd02651    2 IIIDCDPGHDDAVAILLALFHP-ELDLLGITTVAGNVPLEKTTRNALKLLTLLGRTDVPVAAGAARPLVRPLITASDIHG 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119167454 122 SEGISGVEVHEPKQPLAEGNAVDYLIRTLRAAPEKsVTLAMLGPETNLALALTQAPDIVKGVREIVIMGGAhFNGGNITP 201
Cdd:cd02651   81 ESGLDGADLPPPPRRPEDIHAVDAIIDTLRASPEP-ITLVATGPLTNIALLLRKYPELAERIKEIVLMGGA-LGRGNITP 158
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119167454 202 AAEFNIFADPHAAEIVLKSGAPITMLPLDVTHKILTSPERIAKLRNLGNQAGKTVADILDAYVqydiKYYGLK---GGPV 278
Cdd:cd02651  159 AAEFNIFVDPEAAKIVFNSGIPITMVPLDVTHKALATPEVIERIRALGNPVGKMLAELLDFFA----ETYGSAfteGPPL 234
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 119167454 279 HDATVVAYLLKPSLFKGKRINVQVDSREGITFGQTVADWYGGLKQPANVEWINEGDAQGFFDLLTERI 346
Cdd:cd02651  235 HDPCAVAYLLDPELFTTKRANVDVETEGELTRGRTVVDLRGVTGRPANAQVAVDVDVEKFWDLLLEAL 302
IU_nuc_hydro pfam01156
Inosine-uridine preferring nucleoside hydrolase;
42-340 4.12e-106

Inosine-uridine preferring nucleoside hydrolase;


Pssm-ID: 460086 [Multi-domain]  Cd Length: 253  Bit Score: 311.06  E-value: 4.12e-106
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119167454   42 LIIDTDPGADDVIALLFAMASPkELKIQALTTVAGNVPLEKTARNARLAREWGKRPDIPVYAGaprpllrtpiyaadvhg 121
Cdd:pfam01156   1 VIIDTDPGIDDALALLLALASP-EIELLGITTVAGNVSLEQTTRNALRLLELGGRDDIPVYAG----------------- 62
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119167454  122 segisgvevhepkqplaegnavdyliRTLRAAPEksVTLAMLGPETNLALALTQAPDIVKGVREIVIMGGAHFNGGNITP 201
Cdd:pfam01156  63 --------------------------EAIREPGE--VTLVATGPLTNLALALRLDPELAKKIKELVIMGGAFGVRGNVTP 114
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119167454  202 AAEFNIFADPHAAEIVLKSGAPITMLPLDVTHKILTSPERIAKLRNLGNQAGKTVADILDAYVQYDIKYYGLKGGPVHDA 281
Cdd:pfam01156 115 AAEFNIFVDPEAAKIVFTSGLPITMVPLDVTHQALLTPEDLERLAALGTPLGRFLADLLRFYAEFYRERFGIDGPPLHDP 194
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 119167454  282 TVVAYLLKPSLFKGKRINVQVDSREGITFGQTVADWYGGLKQPANVEWINEGDAQGFFD 340
Cdd:pfam01156 195 LAVAVALDPELFTTRRLNVDVETTGGLTRGQTVVDDRGGWGKPPNVRVATDVDVDRFWE 253
rihA PRK10443
ribonucleoside hydrolase 1; Provisional
39-348 2.11e-94

ribonucleoside hydrolase 1; Provisional


Pssm-ID: 182465 [Multi-domain]  Cd Length: 311  Bit Score: 283.48  E-value: 2.11e-94
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119167454  39 PRTLIIDTDPGADDVIALLFAMASPkELKIQALTTVAGNVPLEKTARNARLAREWGKRPDIPVYAGAPRPLLRTPIYAAD 118
Cdd:PRK10443   2 ALPIILDCDPGHDDAIALVLALASP-ELDVKAVTTSAGNQTPEKTLRNALRMLTLLNRTDIPVAGGAVKPLMRELIIADN 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119167454 119 VHGSEGISGVEVHEPKQPLAEGNAVDYLIRTLRAAPEKsVTLAMLGPETNLALALTQAPDIVKGVREIVIMGGAhFNGGN 198
Cdd:PRK10443  81 VHGESGLDGPALPEPTFAPQNCTAVELMAKTLRESAEP-VTLVSTGPQTNVALLLASHPELHSKIARIVIMGGA-MGLGN 158
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119167454 199 ITPAAEFNIFADPHAAEIVLKSGAPITMLPLDVTHKILTSPERIAKLRNLGNQAGKTVADILDAYVQY--DIKyYGLKGG 276
Cdd:PRK10443 159 WTPAAEFNIYVDPEAAEIVFQSGIPIVMAGLDVTHKAQIMDEDIERIRAIGNPVATIVAELLDFFMEYhkDEK-WGFVGA 237
                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 119167454 277 PVHDATVVAYLLKPSLFKGKRINVQVDSREGITFGQTVADWYGGLKQPANVEWINEGDAQGFFDLLTERIAR 348
Cdd:PRK10443 238 PLHDPCTIAWLLKPELFTTVERWVGVETQGEYTQGMTVVDYYQLTGNKPNATVLVDVDRQGFVDLLAERLKF 309
 
Name Accession Description Interval E-value
URH1 COG1957
Inosine-uridine nucleoside N-ribohydrolase [Nucleotide transport and metabolism]; ...
38-349 8.20e-149

Inosine-uridine nucleoside N-ribohydrolase [Nucleotide transport and metabolism]; Inosine-uridine nucleoside N-ribohydrolase is part of the Pathway/BioSystem: Pyrimidine salvage


Pssm-ID: 441560 [Multi-domain]  Cd Length: 310  Bit Score: 421.48  E-value: 8.20e-149
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119167454  38 SPRTLIIDTDPGADDVIALLFAMASPkELKIQALTTVAGNVPLEKTARNARLAREWGKRPDIPVYAGAPRPLLRTPIYAA 117
Cdd:COG1957    1 MMRKVIIDTDPGIDDALALLLALASP-EIDLLGITTVAGNVPLEQTTRNALKLLELAGRTDVPVAAGAARPLVRPLVTAE 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119167454 118 DVHGSEGISGVEVHEPKQPLAEGNAVDYLIRTLRAAPEKsVTLAMLGPETNLALALTQAPDIVKGVREIVIMGGAHFNGG 197
Cdd:COG1957   80 HVHGEDGLGGVDLPEPTRPPEPEHAVDFIIETLRAAPGE-VTLVALGPLTNLALALRKDPELAERIKRIVIMGGAFFVPG 158
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119167454 198 NITPAAEFNIFADPHAAEIVLKSGAPITMLPLDVTHKILTSPERIAKLRNLGNQAGKTVADILDAYVQYDIKYYGLKGGP 277
Cdd:COG1957  159 NVTPVAEFNIYVDPEAAKIVFASGIPITMVGLDVTHQALLTPEDLARLAALGTPLGRFLADLLDFYLDFYRERYGLDGCP 238
                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 119167454 278 VHDATVVAYLLKPSLFKGKRINVQVDSREGITFGQTVADWYGGLKQPANVEWINEGDAQGFFDLLTERIARL 349
Cdd:COG1957  239 LHDPLAVAYLLDPELFTTRPAPVDVETDGELTRGQTVVDWRGVTGRPPNARVALDVDAERFLDLLLERLARL 310
nuc_hydro_IU_UC_XIUA cd02651
nuc_hydro_IU_UC_XIUA: inosine-uridine preferring, ...
42-346 1.45e-147

nuc_hydro_IU_UC_XIUA: inosine-uridine preferring, xanthosine-inosine-uridine-adenosine-preferring and, uridine-cytidine preferring nucleoside hydrolases. Nucleoside hydrolases cleave the N-glycosidic bond in nucleosides generating ribose and the respective base. These enzymes vary in their substrate specificity. This group contains proteins similar to nucleoside hydrolases which hydrolyze both pyrimidine and purine ribonucleosides: the inosine-uridine preferring nucleoside hydrolase from Crithidia fasciculata, the inosine-uridine-xanthosine preferring nucleoside hydrolase RihC from Escherichia coli and the xanthosine-inosine-uridine-adenosine-preferring nucleoside hydrolase RihC from Salmonella enterica serovar Typhimurium. This group also contains proteins similar to the pyrimidine-specific uridine-cytidine preferring nucleoside hydrolases URH1 from Saccharomyces cerevisiae, E. coli RihA and E. coli RihB. E. coli RihA is equally efficient with uridine and cytidine, E. coli RihB prefers cytidine over uridine. S. cerevisiae URH1 prefers uridine over cytidine.


Pssm-ID: 239117 [Multi-domain]  Cd Length: 302  Bit Score: 418.10  E-value: 1.45e-147
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119167454  42 LIIDTDPGADDVIALLFAMASPkELKIQALTTVAGNVPLEKTARNARLAREWGKRPDIPVYAGAPRPLLRTPIYAADVHG 121
Cdd:cd02651    2 IIIDCDPGHDDAVAILLALFHP-ELDLLGITTVAGNVPLEKTTRNALKLLTLLGRTDVPVAAGAARPLVRPLITASDIHG 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119167454 122 SEGISGVEVHEPKQPLAEGNAVDYLIRTLRAAPEKsVTLAMLGPETNLALALTQAPDIVKGVREIVIMGGAhFNGGNITP 201
Cdd:cd02651   81 ESGLDGADLPPPPRRPEDIHAVDAIIDTLRASPEP-ITLVATGPLTNIALLLRKYPELAERIKEIVLMGGA-LGRGNITP 158
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119167454 202 AAEFNIFADPHAAEIVLKSGAPITMLPLDVTHKILTSPERIAKLRNLGNQAGKTVADILDAYVqydiKYYGLK---GGPV 278
Cdd:cd02651  159 AAEFNIFVDPEAAKIVFNSGIPITMVPLDVTHKALATPEVIERIRALGNPVGKMLAELLDFFA----ETYGSAfteGPPL 234
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 119167454 279 HDATVVAYLLKPSLFKGKRINVQVDSREGITFGQTVADWYGGLKQPANVEWINEGDAQGFFDLLTERI 346
Cdd:cd02651  235 HDPCAVAYLLDPELFTTKRANVDVETEGELTRGRTVVDLRGVTGRPANAQVAVDVDVEKFWDLLLEAL 302
IU_nuc_hydro pfam01156
Inosine-uridine preferring nucleoside hydrolase;
42-340 4.12e-106

Inosine-uridine preferring nucleoside hydrolase;


Pssm-ID: 460086 [Multi-domain]  Cd Length: 253  Bit Score: 311.06  E-value: 4.12e-106
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119167454   42 LIIDTDPGADDVIALLFAMASPkELKIQALTTVAGNVPLEKTARNARLAREWGKRPDIPVYAGaprpllrtpiyaadvhg 121
Cdd:pfam01156   1 VIIDTDPGIDDALALLLALASP-EIELLGITTVAGNVSLEQTTRNALRLLELGGRDDIPVYAG----------------- 62
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119167454  122 segisgvevhepkqplaegnavdyliRTLRAAPEksVTLAMLGPETNLALALTQAPDIVKGVREIVIMGGAHFNGGNITP 201
Cdd:pfam01156  63 --------------------------EAIREPGE--VTLVATGPLTNLALALRLDPELAKKIKELVIMGGAFGVRGNVTP 114
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119167454  202 AAEFNIFADPHAAEIVLKSGAPITMLPLDVTHKILTSPERIAKLRNLGNQAGKTVADILDAYVQYDIKYYGLKGGPVHDA 281
Cdd:pfam01156 115 AAEFNIFVDPEAAKIVFTSGLPITMVPLDVTHQALLTPEDLERLAALGTPLGRFLADLLRFYAEFYRERFGIDGPPLHDP 194
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 119167454  282 TVVAYLLKPSLFKGKRINVQVDSREGITFGQTVADWYGGLKQPANVEWINEGDAQGFFD 340
Cdd:pfam01156 195 LAVAVALDPELFTTRRLNVDVETTGGLTRGQTVVDDRGGWGKPPNVRVATDVDVDRFWE 253
nuc_hydro_CaPnhB cd02650
NH_hydro_CaPnhB: A subgroup of nucleoside hydrolases similar to Corynebacterium ammoniagenes ...
42-329 1.75e-96

NH_hydro_CaPnhB: A subgroup of nucleoside hydrolases similar to Corynebacterium ammoniagenes Purine/pyrimidine nucleoside hydrolase (pnhB). Nucleoside hydrolases cleave the N-glycosidic bond in nucleosides generating ribose and the respective base. These enzymes vary in their substrate specificity.


Pssm-ID: 239116 [Multi-domain]  Cd Length: 304  Bit Score: 288.41  E-value: 1.75e-96
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119167454  42 LIIDTDPGADDVIALLFAMASPkELKIQALTTVAGNVPLEKTARNA-RLAREWGkRPDIPVYAGAPRPLLR-TPIYAADV 119
Cdd:cd02650    2 LILDTDPGIDDAMALAYALAHP-DVDLIGVTTVYGNVTIETATRNAlALLELFG-RPDVPVAEGAAKPLTRpPFRIATFV 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119167454 120 HGSEGISGVEVHEPKQPLAEGNAVDYLIRTLRAAPeKSVTLAMLGPETNLALALTQAPDIVKGVREIVIMGGAHFNGGNI 199
Cdd:cd02650   80 HGDNGLGDVELPAPPRQPEDESAADFLIELANEYP-GELTLVAVGPLTNLALALARDPDFAKLVKQVVVMGGAFTVPGNV 158
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119167454 200 TPAAEFNIFADPHAAEIVLKSGAPITMLPLDVTHKILTSPERIAKLRNLGNQAGKTVADILDAYVQYDIKYYGLKGGPVH 279
Cdd:cd02650  159 TPAAEANIHGDPEAADIVFTAGADLTMVGLDVTTQTLLTREDLDELRDSGGKAGQFLADMLDYYIDFYQESPGLRGCALH 238
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|
gi 119167454 280 DATVVAYLLKPSLFKGKRINVQVDSrEGITFGQTVADWYGGLKQPANVEW 329
Cdd:cd02650  239 DPLAVAAAVDPSLFTTREGVVRVET-EGPTRGRTIGDRDGRRFWDSSPNA 287
rihA PRK10443
ribonucleoside hydrolase 1; Provisional
39-348 2.11e-94

ribonucleoside hydrolase 1; Provisional


Pssm-ID: 182465 [Multi-domain]  Cd Length: 311  Bit Score: 283.48  E-value: 2.11e-94
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119167454  39 PRTLIIDTDPGADDVIALLFAMASPkELKIQALTTVAGNVPLEKTARNARLAREWGKRPDIPVYAGAPRPLLRTPIYAAD 118
Cdd:PRK10443   2 ALPIILDCDPGHDDAIALVLALASP-ELDVKAVTTSAGNQTPEKTLRNALRMLTLLNRTDIPVAGGAVKPLMRELIIADN 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119167454 119 VHGSEGISGVEVHEPKQPLAEGNAVDYLIRTLRAAPEKsVTLAMLGPETNLALALTQAPDIVKGVREIVIMGGAhFNGGN 198
Cdd:PRK10443  81 VHGESGLDGPALPEPTFAPQNCTAVELMAKTLRESAEP-VTLVSTGPQTNVALLLASHPELHSKIARIVIMGGA-MGLGN 158
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119167454 199 ITPAAEFNIFADPHAAEIVLKSGAPITMLPLDVTHKILTSPERIAKLRNLGNQAGKTVADILDAYVQY--DIKyYGLKGG 276
Cdd:PRK10443 159 WTPAAEFNIYVDPEAAEIVFQSGIPIVMAGLDVTHKAQIMDEDIERIRAIGNPVATIVAELLDFFMEYhkDEK-WGFVGA 237
                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 119167454 277 PVHDATVVAYLLKPSLFKGKRINVQVDSREGITFGQTVADWYGGLKQPANVEWINEGDAQGFFDLLTERIAR 348
Cdd:PRK10443 238 PLHDPCTIAWLLKPELFTTVERWVGVETQGEYTQGMTVVDYYQLTGNKPNATVLVDVDRQGFVDLLAERLKF 309
PRK10768 PRK10768
ribonucleoside hydrolase RihC; Provisional
42-350 1.12e-87

ribonucleoside hydrolase RihC; Provisional


Pssm-ID: 182713 [Multi-domain]  Cd Length: 304  Bit Score: 266.00  E-value: 1.12e-87
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119167454  42 LIIDTDPGADDVIALLFAMASPkELKIQALTTVAGNVPLEKTARNA-RLAREWGKrpDIPVYAGAPRPLLRTPIYAADVH 120
Cdd:PRK10768   5 IILDTDPGIDDAVAIAAALFAP-ELDLKLITTVAGNVSVEKTTRNAlKLLHFFNS--DVPVAQGAAKPLVRPLRDAASVH 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119167454 121 GSEGISGVEVHEPKQPLAEGNAVDYLIRTLRAAPEKsVTLAMLGPETNLALALTQAPDIVKGVREIVIMGGAhFNGGNIT 200
Cdd:PRK10768  82 GESGMEGYDFPEHTRKPLSIPAVEAMRDALMNAPEP-VTLVAIGPLTNIALLLSTYPEVKPYIKRIVLMGGS-AGRGNVT 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119167454 201 PAAEFNIFADPHAAEIVLKSGAPITMLPLDVTHKILTSPERIAKLRNLgNQAGKTVADILDAYVQYDIKyyglKGGPVHD 280
Cdd:PRK10768 160 PNAEFNIAVDPEAAAIVFRSGIPIVMCGLDVTNQALLTPDYLATLPEL-NRTGKMLHALFSHYRSGSMQ----TGLRMHD 234
                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119167454 281 ATVVAYLLKPSLFKGKRINVQVDSREGITFGQTVADWYGGLKQPANVEWINEGDAQGFFDLLTERIARLP 350
Cdd:PRK10768 235 VCAIAYLLRPELFTLKPCFVDVETQGEFTAGATVVDIDGRLGKPANAQVALDIDVDGFQKWFAEVLALAN 304
rihB PRK09955
ribosylpyrimidine nucleosidase;
40-344 1.13e-85

ribosylpyrimidine nucleosidase;


Pssm-ID: 182166 [Multi-domain]  Cd Length: 313  Bit Score: 261.42  E-value: 1.13e-85
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119167454  40 RTLIIDTDPGADDVIALLFAMASPKeLKIQALTTVAGNVPLEKTARNArLAREWGKRPDIPVYAGAPRPLLRTPIYAADV 119
Cdd:PRK09955   4 RKIILDCDPGHDDAIAMMMAAKHPA-IDLLGITIVAGNQTLDKTLING-LNVCQKLEINVPVYAGMPQPIMRQQIVADNI 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119167454 120 HGSEGISGvEVHEP--KQPlAEGNAVDYLIRTLRAApEKSVTLAMLGPETNLALALTQAPDIVKGVREIVIMGGAhFNGG 197
Cdd:PRK09955  82 HGETGLDG-PVFEPltRQA-ESTHAVKYIIDTLMAS-DGDITLVPVGPLSNIAVAMRMQPAILPKIREIVLMGGA-YGTG 157
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119167454 198 NITPAAEFNIFADPHAAEIVLKSGAPITMLPLDVTHKILTSPERIAKLRNLGNQAGKTVADILDAYVQYDIKYYGLKGGP 277
Cdd:PRK09955 158 NFTPSAEFNIFADPEAARVVFTSGVPLVMMGLDLTNQTVCTPDVIARMERAGGPAGELFSDIMNFTLKTQFENYGLAGGP 237
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 119167454 278 VHDATVVAYLLKPSLFKGKRINVQVDSREGITFGQTVADWYGGLKQPANVEWINEGDAQGFFDLLTE 344
Cdd:PRK09955 238 VHDATCIGYLINPDGIKTQEMYVEVDVNSGPCYGRTVCDELGVLGKPANTKVGITIDTDWFWGLVEE 304
nuc_hydro cd00455
nuc_hydro: Nucleoside hydrolases. Nucleoside hydrolases cleave the N-glycosidic bond in ...
42-342 1.31e-80

nuc_hydro: Nucleoside hydrolases. Nucleoside hydrolases cleave the N-glycosidic bond in nucleosides generating ribose and the respective base. These enzymes vary in their substrate specificity. This group contains eukaryotic, bacterial and archeal proteins similar to the inosine-uridine preferring nucleoside hydrolase from Crithidia fasciculata, the xanthosine-inosine-uridine-adenosine-preferring nucleoside hydrolase RihC from Salmonella enterica serovar Typhimurium, the purine-specific inosine-adenosine-guanosine-preferring nucleoside hydrolase from Trypanosoma vivax and, pyrimidine-specific uridine-cytidine preferring nucleoside hydrolases such as URH1 from Saccharomyces cerevisiae, RihA and RihB from Escherichia coli. Nucleoside hydrolases are of interest as a target for antiprotozoan drugs as, no nucleoside hydrolase activity or genes encoding these enzymes have been detected in humans and, parasitic protozoans lack de novo purine synthesis relying on nucleoside hydrolase to scavenge purine and/or pyrimidines from the environment.


Pssm-ID: 238257 [Multi-domain]  Cd Length: 295  Bit Score: 247.63  E-value: 1.31e-80
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119167454  42 LIIDTDPGADDVIALLFAMASPkELKIQALTTVAGNVPLEKTARNARLAREWGKRPDIPVYAGAPRPLlRTPIYAADVHG 121
Cdd:cd00455    1 VILDTDPGIDDAFALMYALLHP-EIELVGIVATYGNVTLEQATQNAAYLLELLGRLDIPVYAGATRPL-TGEIPAAYPEI 78
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119167454 122 SEGISGVEVHEPKQPLAEGNAVDYLIRTLRAAPeKSVTLAMLGPETNLALALTQAPDIVKGVREIVIMGGAHFNGGNITP 201
Cdd:cd00455   79 HGEGGLGLPIPPIIEADDPEAVQLLIDLIRKYP-DEITIVALGPLTNLAMAFILDPDIKDRVKEIVIMGGAFLVPGNVTP 157
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119167454 202 AAEFNIFADPHAAEIVLKSGAPITMLPLDVTHKILTSPERIAKLRNLGNQAGKTVADILDAYvQYDIKYYGLKGGPVHDA 281
Cdd:cd00455  158 VAEANFYGDPEAANIVFNSAKNLTIVPLDVTNQAVLTPPMVERIFEQGTSIGLLIKPMIDYY-YKAYQKPGIEGSPIHDP 236
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 119167454 282 TVVAYLLKPSLFKGKRINVQVDSrEGITFGQTVADWYGGlkQPANVEWINEG-DAQGFFDLL 342
Cdd:cd00455  237 LAVAYLLNPSMFDYSKVPVDVDT-DGLTRGQTIADFREN--PGNGVTRVAVNlDYPDFIELI 295
nuc_hydro_CeIAG cd02649
nuc_hydro_CeIAG: Nucleoside hydrolases similar to the inosine-adenosine-guanosine-preferring ...
40-342 7.62e-79

nuc_hydro_CeIAG: Nucleoside hydrolases similar to the inosine-adenosine-guanosine-preferring nucleoside hydrolase from Caenorhabditis elegans. Nucleoside hydrolases cleave the N-glycosidic bond in nucleosides generating ribose and the respective base. These enzymes vary in their substrate specificity. This group contains eukaryotic, bacterial and archeal proteins similar to the purine-preferring nucleoside hydrolase (IAG-NH) from C. elegans and the salivary purine nucleosidase from Aedes aegypti. C. elegans IAG-NH exhibits a high affinity for the substrate analogue p-nitrophenylriboside (p-NPR).


Pssm-ID: 239115 [Multi-domain]  Cd Length: 306  Bit Score: 243.71  E-value: 7.62e-79
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119167454  40 RTLIIDTDPGADDVIALLFAMASPKeLKIQALTTVAGNVPLEKTARNARLAREWGKRPDIPVYAGAPRPLLRTPIYAADV 119
Cdd:cd02649    1 RKLIIDTDCGGDDAWALLMALASPN-VEVLAITCVHGNTNVEQVVKNALRVLEACGRRDIPVYRGASKPLLGPGPTAAYF 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119167454 120 HGSEGISGVEVHEPK--QPLAEGNAVDYLIRTLRAAPeKSVTLAMLGPETNLALALTQAPDIVKGVREIVIMGGAHFNGG 197
Cdd:cd02649   80 HGKDGFGDVGFPEPKdeLELQKEHAVDAIIRLVREYP-GEITLVALGPLTNLALAYRLDPSLPQKIKRLYIMGGNREGVG 158
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119167454 198 NITPAAEFNIFADPHAAEIVLKS-GAPITMLPLDVT-HKILTSPERIAKLRNLGNQAGKTVADILDAYVQYDIKyYGLKG 275
Cdd:cd02649  159 NTTPAAEFNFHVDPEAAHIVLNSfGCPITIVPWETTlLAFPLDWEFEDKWANRLEKALFAESLNRREYAFASEG-LGGDG 237
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 119167454 276 GPVHDATVVAYLLKPSLF-KGKRINVQVDSREGITFGQTVADWYGGLKQPANVEWINEGDAQGFFDLL 342
Cdd:cd02649  238 WVPCDALAVAAALDPSIItRRLTYAVDVELHGELTRGQMVVDWLGTLKKKPNARVITKIDREKFKELL 305
PLN02717 PLN02717
uridine nucleosidase
40-316 2.43e-77

uridine nucleosidase


Pssm-ID: 178319 [Multi-domain]  Cd Length: 316  Bit Score: 239.89  E-value: 2.43e-77
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119167454  40 RTLIIDTDPGADDVIALLFAMASPkELKIQALTTVAGNVPLEKTARNARLAREWGKRPDIPVYAGAPRPLLR-TPIYAAD 118
Cdd:PLN02717   1 KKLIIDTDPGIDDAMAILMALRSP-EVEVIGLTTIFGNVTTKLATRNALHLLEMAGRPDVPVAEGSHEPLKGgTKPRIAD 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119167454 119 -VHGSEGISGVEVHEPKQPLAEGNAVDYLIRTLRAAPEKsVTLAMLGPETNLALALTQAPDIVKGVREIVIMGGAHFNGG 197
Cdd:PLN02717  80 fVHGSDGLGNTNLPPPKGKKIEKSAAEFLVEKVSEYPGE-VTVVALGPLTNLALAIKLDPSFAKKVGQIVVLGGAFFVNG 158
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119167454 198 NITPAAEFNIFADPHAAEIVLKSGAPITMLPLDVTHKILTSPERIAKLRNLGNQAGKTVADILDAYVQYDIKYYGLKGGP 277
Cdd:PLN02717 159 NVNPAAEANIFGDPEAADIVFTSGADITVVGINVTTQVVLTDADLEELRDSKGKYAQFLCDICKFYRDWHRKSYGIDGIY 238
                        250       260       270
                 ....*....|....*....|....*....|....*....
gi 119167454 278 VHDATVVAYLLKPSLFKGKRINVQVDSrEGITFGQTVAD 316
Cdd:PLN02717 239 LHDPTALLAAVRPSLFTYKEGVVRVET-EGICRGLTLFD 276
nuc_hydro_3 cd02653
NH_3: A subgroup of nucleoside hydrolases. This group contains eukaryotic and bacterial ...
42-346 5.62e-67

NH_3: A subgroup of nucleoside hydrolases. This group contains eukaryotic and bacterial proteins similar to nucleoside hydrolases. Nucleoside hydrolases cleave the N-glycosidic bond in nucleosides generating ribose and the respective base. These enzymes vary in their substrate specificity.


Pssm-ID: 239119 [Multi-domain]  Cd Length: 320  Bit Score: 213.78  E-value: 5.62e-67
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119167454  42 LIIDTDPGADDVIALLFAMASPkELKIQALTTVAGNVPLEKTARNARLAREWGKRPDIPVYAGAPRPLLRTPIYAADVHG 121
Cdd:cd02653    2 VIIDCDPGIDDALALLYLLASP-DLDVVGITTTAGNVPVEQVAANALGVLELLGRTDIPVYLGADKPLAGPLTTAQDTHG 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119167454 122 SEGISGVEVHEPKQPLAEGNAVDYLIRTLRAAPEksVTLAMLGPETNLALALTQAPDIVKGVREIVIMGGAHFNGGNITP 201
Cdd:cd02653   81 PDGLGYAELPASTRTLSDESAAQAWVDLARAHPD--LIGLATGPLTNLALALREEPELPRLLRRLVIMGGAFNSRGNTSP 158
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119167454 202 AAEFNIFADPHAAEIVLK----SGAPITMLPLDVTHKILTSPERIAKLRNLGNQAGKTVADILDAYVQYDIKYYGLKGGP 277
Cdd:cd02653  159 VAEWNYWVDPEAAKEVLAafggHPVRPTICGLDVTRAVVLTPNLLERLARAKDSVGAFIEDALRFYFEFHWAYGHGYGAV 238
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 119167454 278 VHDATVVAYLLKPSLFKGKRINVQVDSrEGITFGQTVADWYGGLKQPANVEWINEGDAQGFFDLLTERI 346
Cdd:cd02653  239 IHDPLAAAVALNPNLARGRPAYVDVEC-TGVLTGQTVVDWAGFWGKGANAEILTKVDSQDFMALFIERV 306
nuc_hydro_1 cd02648
NH_1: A subgroup of nucleoside hydrolases. This group contains fungal proteins similar to ...
39-232 1.73e-43

NH_1: A subgroup of nucleoside hydrolases. This group contains fungal proteins similar to nucleoside hydrolases. Nucleoside hydrolases cleave the N-glycosidic bond in nucleosides generating ribose and the respective base. These enzymes vary in their substrate specificity.


Pssm-ID: 239114 [Multi-domain]  Cd Length: 367  Bit Score: 153.89  E-value: 1.73e-43
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119167454  39 PRTLIIDTDPGADDVIALLFAMASPKELKIQALTTVAGNVPLEKTARNAR-----LARE--WGKRPDIPVYA-------- 103
Cdd:cd02648    1 PHPIIIDTDPGVDDVLAILLALSSPEEVDVALISLTFGNTTLDHALRNVLrlfhvLEREraWRATPGVRYRAfsadaekp 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119167454 104 ----GAPRPLLRTPIYAADVHGSEGISGV---------------EVHEPKQPlAEGNAVDYLIRTLRAAPEKSVTLAMLG 164
Cdd:cd02648   81 ivasGSDQPLEGERLTASYFHGRDGLSGVhwlhpdftpvetwipEIVAPLTP-SDKPAYDVILDILREEPDHTVTIAALG 159
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 119167454 165 PETNLALALTQAPDIVKGVREIVIMGGAHFNGGNITPAAEFNIFADPHAAEIVLKSGA----------PITMLPLDVT 232
Cdd:cd02648  160 PLTNLAAAARKDPETFAKVGEVVVMGGAIDVPGNTSPVAEFNCFADPYAAAVVIDEPPstapearrklPLQVFPLDIT 237
nuc_hydro_CjNH cd02654
nuc_hydro_CjNH. Nucleoside hydrolases similar to Campylobacter jejuni nucleoside hydrolase. ...
42-342 3.43e-39

nuc_hydro_CjNH. Nucleoside hydrolases similar to Campylobacter jejuni nucleoside hydrolase. This group contains eukaryotic and bacterial proteins similar to C. jejuni nucleoside hydrolase. Nucleoside hydrolases cleave the N-glycosidic bond in nucleosides generating ribose and the respective base. These enzymes vary in their substrate specificity. C. jejuni nucleoside hydrolase is inactive against natural nucleosides or against common nucleoside analogues.


Pssm-ID: 239120 [Multi-domain]  Cd Length: 318  Bit Score: 141.15  E-value: 3.43e-39
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119167454  42 LIIDTD----PGADDVIALLFAmASPKELKIQALTTVAGNVPLEKTARNARLAREWGKRPDIPVYAGAPRPLLRT---PI 114
Cdd:cd02654    2 VILDNDiamgRDTDDGLALALL-LWSPEVELLGLSAVSGNCWLSAVTYNVLRMLELAGADAIPVYAGANTPLGRTnraFH 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119167454 115 YAADVHGS---EGISGVE-----VHEPKQPLAEGNAVDYLIRTLRAAPeKSVTLAMLGPETNLALALTQAPDIVKGVREI 186
Cdd:cd02654   81 AWESLYGAylwQGAWSPEysdmyTNASIIRNASIPAALFMIEMVRKHP-HEVSIVAAGPLTNLALALRIDPDFAPLAKEL 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119167454 187 VIMGGAHFNGG---NITPAAEFNIFADPHAAEIVLKSGAPITMLPLDVTHKILTSPERIAKLRNLGNQAGKTvadiLDAY 263
Cdd:cd02654  160 VIMGGYLDDIGefvNRHYASDFNLIMDPEAASIVLTAPWKSITIPGNVTNRTCLTPEQIKADDPLRDFIRET----LDLP 235
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119167454 264 VQYDIKYYGLKGG-PVHDATVVAYLLKPSLFKGKR---INVQVDSREGitfGQTVADWYGGLK---QPANVEWINEGDAQ 336
Cdd:cd02654  236 IDYAKEFVGTGDGlPMWDELASAVALDPELATSSEtfyIDVQTDSDGG---GQLIWPEDLLLAkglRPYHVKVITAVDVA 312

                 ....*.
gi 119167454 337 GFFDLL 342
Cdd:cd02654  313 AFLNLI 318
nuc_hydro_TvIAG cd02647
nuc_hydro_ TvIAG: Nucleoside hydrolases similar to the Inosine-adenosine-guanosine-preferring ...
42-235 2.63e-34

nuc_hydro_ TvIAG: Nucleoside hydrolases similar to the Inosine-adenosine-guanosine-preferring nucleoside hydrolase from Trypanosoma vivax. Nucleoside hydrolases cleave the N-glycosidic bond in nucleosides generating ribose and the respective base. Nucleoside hydrolases vary in their substrate specificity. This group contains eukaryotic and bacterial proteins similar to the purine specific inosine-adenosine-guanosine-preferring nucleoside hydrolase (IAG-NH) from T. vivax. T. vivax IAG-NH is of the order of a thousand to ten thousand fold more specific towards the naturally occurring purine nucleosides, than towards the pyrimidine nucleosides.


Pssm-ID: 239113 [Multi-domain]  Cd Length: 312  Bit Score: 127.92  E-value: 2.63e-34
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119167454  42 LIIDTDPGADDVIALLFaMASPKELKIQALTtVAGNVP--LEKTARNARLAR--EWGKRPDIPVYAGAPRPLLRTPI--- 114
Cdd:cd02647    3 VIFDHDGNVDDLVALLL-LLKNEKVDLKGIG-VSGIDAdcYVEPAVSVTRKLidRLGQRDAIPVGKGGSRAVNPFPRswr 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119167454 115 -YAADV--HGSEGisgVEVHEPKQPLAEGNAVDYLIRTLRAAPEKsVTLAMLGPETNLALALTQAPDIVKGVREIVIMGG 191
Cdd:cd02647   81 rDAAFSvdHLPIL---NERYTVETPLAEETAQLVLIEKIKASLEP-VTLLVTGPLTNLARALDSDPDISSNIEEVYIMGG 156
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*....
gi 119167454 192 AHFNGGNI-----TPAAEFNIFADPHAAEIVLKSGAPITMLPLDVTHKI 235
Cdd:cd02647  157 GVDAPGNVftppsNGTAEFNIFWDPLAAKTVFDSGLKITLVPLDATNTV 205
nuc_hydro_2 cd02652
NH_2: A subgroup of nucleoside hydrolases. This group contains eukaryotic and bacterial ...
42-229 1.23e-15

NH_2: A subgroup of nucleoside hydrolases. This group contains eukaryotic and bacterial proteins similar to nucleoside hydrolases. Nucleoside hydrolases cleave the N-glycosidic bond in nucleosides generating ribose and the respective base. These enzymes vary in their substrate specificity.


Pssm-ID: 239118 [Multi-domain]  Cd Length: 293  Bit Score: 76.38  E-value: 1.23e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119167454  42 LIIDTDPGAD--DVIALLFAMASPKElKIQALTTVAGNVplekTARNARLA--REWGkRPDIPV---YAGAPRPLLRTPI 114
Cdd:cd02652    1 LILDTDIGGDpdDALALALAHALQKC-DLLAVTITLADA----SARRAIDAvnRFYG-RGDIPIgadYHGWPEDAKDHAK 74
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119167454 115 YAADVhgsegisgvEVHEPKQPLAEG--NAVDYLIRTLRAAPEKSVTLAMLGPETNLALALTQAPDIVKG-------VRE 185
Cdd:cd02652   75 FLLEG---------DRLHHDLESAEDalDAVKALRRLLASAEDASVTIVSIGPLTNLAALLDADADPLTGpelvrqkVKR 145
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....
gi 119167454 186 IVIMGGAHFNGGNITPAAEFNIFADPHAAEIVLKSgAPITMLPL 229
Cdd:cd02652  146 LVVMGGAFYDPDGNVQHREYNFVTDPKAAQRVAGR-AQHLGIPV 188
PTZ00313 PTZ00313
inosine-adenosine-guanosine-nucleoside hydrolase; Provisional
38-218 2.64e-08

inosine-adenosine-guanosine-nucleoside hydrolase; Provisional


Pssm-ID: 140334 [Multi-domain]  Cd Length: 326  Bit Score: 54.87  E-value: 2.64e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119167454  38 SPRTLIIDTDPGADDVIALLFAMASPKELK-IQALTTVAGNVPLEKTARNARLAREWGKRPDIPVYagaprPLLRTPIYA 116
Cdd:PTZ00313   1 MPKPVILDHDGNHDDLVALALLLGNPEKVKvIGCICTDADCFVDDAFNVTGKLMCMMHAREATPLF-----PIGKSSFKG 75
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119167454 117 ADVHGSEG---------------ISGVEVHEPKQPLAEG-NAVDYLIRTLRAAPEKsVTLAMLGPETNLALALTQ-APDI 179
Cdd:PTZ00313  76 VNPFPSEWrwsaknmddlpclniPEHVAIWEKLKPENEAlVGEELLADLVMSSPEK-VTICVTGPLSNVAWCIEKyGEEF 154
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....
gi 119167454 180 VKGVREIVIMGGAHFNGGNI-----TPAAEFNIFADPHAAEIVL 218
Cdd:PTZ00313 155 TKKVEECVIMGGAVDVGGNVflpgtDGSAEWNIYWDPPAAKTVL 198
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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