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Conserved domains on  [gi|15239346|ref|NP_201434|]
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Leucine-rich repeat (LRR) family protein [Arabidopsis thaliana]

Protein Classification

leucine-rich repeat domain-containing protein( domain architecture ID 1000136)

leucine-rich repeat (LRR) domain-containing protein may participate in protein-protein interactions

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PLN00113 super family cl33413
leucine-rich repeat receptor-like protein kinase; Provisional
 30-337 2.72e-37

leucine-rich repeat receptor-like protein kinase; Provisional


The actual alignment was detected with superfamily member PLN00113:

Pssm-ID: 215061 [Multi-domain]  Cd Length: 968  Bit Score: 144.61  E-value: 2.72e-37
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239346   30 LKDFKNSVDaksmSPGSCLSSWDFSVDPCDnifsdtfTCGFRCdsvvTGSGRVTELSLDQAGYSGSLSSVSFNLPYLQTL 109
Cdd:PLN00113  34 LLSFKSSIN----DPLKYLSNWNSSADVCL-------WQGITC----NNSSRVVSIDLSGKNISGKISSAIFRLPYIQTI 98

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239346  110 DLSGNYFSGPLPDSLSNLTRLTR-LTVSGNSFSGSIPDsvGSMTVLEELVLDSNRLYGSIPASFNGLSSLKRLEIQLNNI 188
Cdd:PLN00113  99 NLSNNQLSGPIPDDIFTTSSSLRyLNLSNNNFTGSIPR--GSIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVL 176

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239346  189 SGEFP-DLSSLKNLYYLDASDNRISGRIPSFLPE--SIVQISMRNNLFQGTIPESFKLLNSLEVIDLSHNKLSGSIPSFI 265
Cdd:PLN00113 177 VGKIPnSLTNLTSLEFLTLASNQLVGQIPRELGQmkSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSL 256

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 15239346  266 FTHQSLQQLTLSFNGFTSLESPyySPLGLpSELISVDLSNNQILGALPLFMGLSPKLSALSLENNKFFGMIP 337
Cdd:PLN00113 257 GNLKNLQYLFLYQNKLSGPIPP--SIFSL-QKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIP 325
 
Name Accession Description Interval E-value
PLN00113 PLN00113
leucine-rich repeat receptor-like protein kinase; Provisional
 30-337 2.72e-37

leucine-rich repeat receptor-like protein kinase; Provisional


Pssm-ID: 215061 [Multi-domain]  Cd Length: 968  Bit Score: 144.61  E-value: 2.72e-37
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239346   30 LKDFKNSVDaksmSPGSCLSSWDFSVDPCDnifsdtfTCGFRCdsvvTGSGRVTELSLDQAGYSGSLSSVSFNLPYLQTL 109
Cdd:PLN00113  34 LLSFKSSIN----DPLKYLSNWNSSADVCL-------WQGITC----NNSSRVVSIDLSGKNISGKISSAIFRLPYIQTI 98

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239346  110 DLSGNYFSGPLPDSLSNLTRLTR-LTVSGNSFSGSIPDsvGSMTVLEELVLDSNRLYGSIPASFNGLSSLKRLEIQLNNI 188
Cdd:PLN00113  99 NLSNNQLSGPIPDDIFTTSSSLRyLNLSNNNFTGSIPR--GSIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVL 176

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239346  189 SGEFP-DLSSLKNLYYLDASDNRISGRIPSFLPE--SIVQISMRNNLFQGTIPESFKLLNSLEVIDLSHNKLSGSIPSFI 265
Cdd:PLN00113 177 VGKIPnSLTNLTSLEFLTLASNQLVGQIPRELGQmkSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSL 256

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 15239346  266 FTHQSLQQLTLSFNGFTSLESPyySPLGLpSELISVDLSNNQILGALPLFMGLSPKLSALSLENNKFFGMIP 337
Cdd:PLN00113 257 GNLKNLQYLFLYQNKLSGPIPP--SIFSL-QKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIP 325
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
102-332 1.94e-28

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 115.80  E-value: 1.94e-28
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239346 102 NLPYLQTLDLSGNyfsgplpDSLSNLTRLTRLTVSGNSFSgSIPDSVGSMTVLEELVLDSNRLyGSIPASFNGLSSLKRL 181
Cdd:COG4886  94 DLTNLTELDLSGN-------EELSNLTNLESLDLSGNQLT-DLPEELANLTNLKELDLSNNQL-TDLPEPLGNLTNLKSL 164

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239346 182 EIQLNNISGEFPDLSSLKNLYYLDASDNRISgripsflpesivqismrnnlfqgTIPESFKLLNSLEVIDLSHNKLSgSI 261
Cdd:COG4886 165 DLSNNQLTDLPEELGNLTNLKELDLSNNQIT-----------------------DLPEPLGNLTNLEELDLSGNQLT-DL 220

                       170       180       190       200       210       220       230
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 15239346 262 PSFIFTHQSLQQLTLSFNGFTSLESpyyspLGLPSELISVDLSNNQIlGALPLFMGLsPKLSALSLENNKF 332
Cdd:COG4886 221 PEPLANLTNLETLDLSNNQLTDLPE-----LGNLTNLEELDLSNNQL-TDLPPLANL-TNLKTLDLSNNQL 284
LRR_RI cd00116
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 ...
 102-282 7.91e-10

Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).


Pssm-ID: 238064 [Multi-domain]  Cd Length: 319  Bit Score: 59.68  E-value: 7.91e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239346 102 NLPYLQTLDLSGNYFSGPLPDSLSNLTR---LTRLTVSGNSFSGSIPDSVG-----SMTVLEELVLDSNRLY--GSIPAS 171
Cdd:cd00116  79 KGCGLQELDLSDNALGPDGCGVLESLLRsssLQELKLNNNGLGDRGLRLLAkglkdLPPALEKLVLGRNRLEgaSCEALA 158

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239346 172 --FNGLSSLKRLEIQLNNISGE-----FPDLSSLKNLYYLDASDNrisgripSFLPESIVQISmrnnlfqgtipESFKLL 244
Cdd:cd00116 159 kaLRANRDLKELNLANNGIGDAgiralAEGLKANCNLEVLDLNNN-------GLTDEGASALA-----------ETLASL 220

                       170       180       190       200
                ....*....|....*....|....*....|....*....|...
gi 15239346 245 NSLEVIDLSHNKLSGSI-----PSFIFTHQSLQQLTLSFNGFT 282
Cdd:cd00116 221 KSLEVLNLGDNNLTDAGaaalaSALLSPNISLLTLSLSCNDIT 263
LRR_8 pfam13855
Leucine rich repeat;
154-211 9.07e-07

Leucine rich repeat;


Pssm-ID: 404697 [Multi-domain]  Cd Length: 61  Bit Score: 45.59  E-value: 9.07e-07
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 15239346   154 LEELVLDSNRLYGSIPASFNGLSSLKRLEIQLNNISGEFPD-LSSLKNLYYLDASDNRI 211
Cdd:pfam13855   3 LRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGaFSGLPSLRYLDLSGNRL 61
 
Name Accession Description Interval E-value
PLN00113 PLN00113
leucine-rich repeat receptor-like protein kinase; Provisional
 30-337 2.72e-37

leucine-rich repeat receptor-like protein kinase; Provisional


Pssm-ID: 215061 [Multi-domain]  Cd Length: 968  Bit Score: 144.61  E-value: 2.72e-37
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239346   30 LKDFKNSVDaksmSPGSCLSSWDFSVDPCDnifsdtfTCGFRCdsvvTGSGRVTELSLDQAGYSGSLSSVSFNLPYLQTL 109
Cdd:PLN00113  34 LLSFKSSIN----DPLKYLSNWNSSADVCL-------WQGITC----NNSSRVVSIDLSGKNISGKISSAIFRLPYIQTI 98

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239346  110 DLSGNYFSGPLPDSLSNLTRLTR-LTVSGNSFSGSIPDsvGSMTVLEELVLDSNRLYGSIPASFNGLSSLKRLEIQLNNI 188
Cdd:PLN00113  99 NLSNNQLSGPIPDDIFTTSSSLRyLNLSNNNFTGSIPR--GSIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVL 176

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239346  189 SGEFP-DLSSLKNLYYLDASDNRISGRIPSFLPE--SIVQISMRNNLFQGTIPESFKLLNSLEVIDLSHNKLSGSIPSFI 265
Cdd:PLN00113 177 VGKIPnSLTNLTSLEFLTLASNQLVGQIPRELGQmkSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSL 256

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 15239346  266 FTHQSLQQLTLSFNGFTSLESPyySPLGLpSELISVDLSNNQILGALPLFMGLSPKLSALSLENNKFFGMIP 337
Cdd:PLN00113 257 GNLKNLQYLFLYQNKLSGPIPP--SIFSL-QKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIP 325
PLN00113 PLN00113
leucine-rich repeat receptor-like protein kinase; Provisional
 102-338 3.89e-37

leucine-rich repeat receptor-like protein kinase; Provisional


Pssm-ID: 215061 [Multi-domain]  Cd Length: 968  Bit Score: 143.84  E-value: 3.89e-37
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239346  102 NLPYLQTLDLSGNYFSGPLPDSLSNLTRLTRLTVSGNSFSGSIPDSVGSMTVLEELVLDSNRLYGSIPASFNGLSSLKRL 181
Cdd:PLN00113 330 SLPRLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRV 409

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239346  182 EIQLNNISGEFP-DLSSLKNLYYLDASDNRISGRIPSFLPE--SIVQISMRNNLFQGTIPESFKLLNsLEVIDLSHNKLS 258
Cdd:PLN00113 410 RLQDNSFSGELPsEFTKLPLVYFLDISNNNLQGRINSRKWDmpSLQMLSLARNKFFGGLPDSFGSKR-LENLDLSRNQFS 488

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239346  259 GSIPSFIFTHQSLQQLTLSFNGFTSlESPyySPLGLPSELISVDLSNNQILGALPLFMGLSPKLSALSLENNKFFGMIPT 338
Cdd:PLN00113 489 GAVPRKLGSLSELMQLKLSENKLSG-EIP--DELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPK 565
PLN00113 PLN00113
leucine-rich repeat receptor-like protein kinase; Provisional
 73-390 1.48e-33

leucine-rich repeat receptor-like protein kinase; Provisional


Pssm-ID: 215061 [Multi-domain]  Cd Length: 968  Bit Score: 133.43  E-value: 1.48e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239346   73 DSVVTGSGRVTELSLDQAGYSGSLSSVSfnLPYLQTLDLSGNYFSGPLPDSLSNLTRLTRLTVSGNSFSGSIPDSVGSMT 152
Cdd:PLN00113 111 DDIFTTSSSLRYLNLSNNNFTGSIPRGS--IPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPNSLTNLT 188

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239346  153 VLEELVLDSNRLYGSIPASFNGLSSLKRLEIQLNNISGEFP-DLSSLKNLYYLDASDNRISGRIPSFLPE--SIVQISMR 229
Cdd:PLN00113 189 SLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPyEIGGLTSLNHLDLVYNNLTGPIPSSLGNlkNLQYLFLY 268

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239346  230 NNLFQGTIPESFKLLNSLEVIDLSHNKLSGSIPSFIFTHQSLQQLTLSFNGFTSlespyYSPLGLPS--ELISVDLSNNQ 307
Cdd:PLN00113 269 QNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTG-----KIPVALTSlpRLQVLQLWSNK 343

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239346  308 ILGALPLFMGLSPKLSALSLENNKFFGMIPTQYvwktVSPGSEFagfqRLLLGGNFLFGVVPGPLMALKpGSANVQLAGN 387
Cdd:PLN00113 344 FSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGL----CSSGNLF----KLILFSNSLEGEIPKSLGACR-SLRRVRLQDN 414


                 ...
gi 15239346  388 CFS 390
Cdd:PLN00113 415 SFS 417
PLN00113 PLN00113
leucine-rich repeat receptor-like protein kinase; Provisional
 106-344 6.49e-29

leucine-rich repeat receptor-like protein kinase; Provisional


Pssm-ID: 215061 [Multi-domain]  Cd Length: 968  Bit Score: 119.57  E-value: 6.49e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239346  106 LQTLDLSGNYFSGPLPDSLSNLTRLTRLTVSGNSFSGSIPDSVGSMTVLEELVLDSNRLYGSIPASF------------- 172
Cdd:PLN00113 358 LTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFtklplvyfldisn 437

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239346  173 NGLS-----------SLKRLEIQLNNISGEFPDLSSLKNLYYLDASDNRISGRIPS---FLPEsIVQISMRNNLFQGTIP 238
Cdd:PLN00113 438 NNLQgrinsrkwdmpSLQMLSLARNKFFGGLPDSFGSKRLENLDLSRNQFSGAVPRklgSLSE-LMQLKLSENKLSGEIP 516

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239346  239 ESFKLLNSLEVIDLSHNKLSGSIPSFIFTHQSLQQLTLSFNGFtSLESPyySPLGLPSELISVDLSNNQILGALPlFMGL 318
Cdd:PLN00113 517 DELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQL-SGEIP--KNLGNVESLVQVNISHNHLHGSLP-STGA 592

                        250       260       270
                 ....*....|....*....|....*....|...
gi 15239346  319 SPKLSALSLENNKFF-------GMIPTQYVWKT 344
Cdd:PLN00113 593 FLAINASAVAGNIDLcggdttsGLPPCKRVRKT 625
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
102-332 1.94e-28

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 115.80  E-value: 1.94e-28
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239346 102 NLPYLQTLDLSGNyfsgplpDSLSNLTRLTRLTVSGNSFSgSIPDSVGSMTVLEELVLDSNRLyGSIPASFNGLSSLKRL 181
Cdd:COG4886  94 DLTNLTELDLSGN-------EELSNLTNLESLDLSGNQLT-DLPEELANLTNLKELDLSNNQL-TDLPEPLGNLTNLKSL 164

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239346 182 EIQLNNISGEFPDLSSLKNLYYLDASDNRISgripsflpesivqismrnnlfqgTIPESFKLLNSLEVIDLSHNKLSgSI 261
Cdd:COG4886 165 DLSNNQLTDLPEELGNLTNLKELDLSNNQIT-----------------------DLPEPLGNLTNLEELDLSGNQLT-DL 220

                       170       180       190       200       210       220       230
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 15239346 262 PSFIFTHQSLQQLTLSFNGFTSLESpyyspLGLPSELISVDLSNNQIlGALPLFMGLsPKLSALSLENNKF 332
Cdd:COG4886 221 PEPLANLTNLETLDLSNNQLTDLPE-----LGNLTNLEELDLSNNQL-TDLPPLANL-TNLKTLDLSNNQL 284
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
101-367 3.19e-27

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 112.33  E-value: 3.19e-27
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239346 101 FNLPYLQTLDLSGNYFSGpLPDSLSNLTRLTRLTVSGNSFSgSIPDSVGSMTVLEELVLDSNRLyGSIPASFNGLSSLKR 180
Cdd:COG4886 110 SNLTNLESLDLSGNQLTD-LPEELANLTNLKELDLSNNQLT-DLPEPLGNLTNLKSLDLSNNQL-TDLPEELGNLTNLKE 186

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239346 181 LEIQLNNISGEFPDLSSLKNLYYLDASDNRISgRIPSFLPE--SIVQISMRNNLFQgTIPEsFKLLNSLEVIDLSHNKLS 258
Cdd:COG4886 187 LDLSNNQITDLPEPLGNLTNLEELDLSGNQLT-DLPEPLANltNLETLDLSNNQLT-DLPE-LGNLTNLEELDLSNNQLT 263

                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239346 259 gSIPSfIFTHQSLQQLTLSFNGFTSLE-SPYYSPLGLPSELISVDLSNNQILGALPLFMGLSPKLSALSLENNKFFGMIP 337
Cdd:COG4886 264 -DLPP-LANLTNLKTLDLSNNQLTDLKlKELELLLGLNSLLLLLLLLNLLELLILLLLLTTLLLLLLLLKGLLVTLTTLA 341

                       250       260       270
                ....*....|....*....|....*....|
gi 15239346 338 TQYVWKTVSPGSEFAGFQRLLLGGNFLFGV 367
Cdd:COG4886 342 LSLSLLALLTLLLLLNLLSLLLTLLLTLGL 371
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
95-309 1.71e-20

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 92.69  E-value: 1.71e-20
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239346  95 SLSSVSFNLPYLQTLDLSGNYFSgPLPDSLSNLTRLTRLTVSGNSFSgSIPDSVGSMTVLEELVLDSNRLyGSIPaSFNG 174
Cdd:COG4886 173 DLPEELGNLTNLKELDLSNNQIT-DLPEPLGNLTNLEELDLSGNQLT-DLPEPLANLTNLETLDLSNNQL-TDLP-ELGN 248

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239346 175 LSSLKRLEIQLNNISgEFPDLSSLKNLYYLDASDNRISGRIPSFLPESIVQISMRNNLFQGTIPESFKLLNSLEVIDLSH 254
Cdd:COG4886 249 LTNLEELDLSNNQLT-DLPPLANLTNLKTLDLSNNQLTDLKLKELELLLGLNSLLLLLLLLNLLELLILLLLLTTLLLLL 327

                       170       180       190       200       210
                ....*....|....*....|....*....|....*....|....*....|....*
gi 15239346 255 NKLSGSIPSFIFTHQSLQQLTLSFNGFTSLESPYYSPLGLPSELISVDLSNNQIL 309
Cdd:COG4886 328 LLLKGLLVTLTTLALSLSLLALLTLLLLLNLLSLLLTLLLTLGLLGLLEATLLTL 382
PLN00113 PLN00113
leucine-rich repeat receptor-like protein kinase; Provisional
 85-262 8.33e-19

leucine-rich repeat receptor-like protein kinase; Provisional


Pssm-ID: 215061 [Multi-domain]  Cd Length: 968  Bit Score: 89.14  E-value: 8.33e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239346   85 LSLDQAGYSGSLSSvSFNLPYLQTLDLSGNYFSGPLPDSLSNLTRLTRLTVSGNSFSGSIPDSVGSMTVLEELVLDSNRL 164
Cdd:PLN00113 457 LSLARNKFFGGLPD-SFGSKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQL 535

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239346  165 YGSIPASFNglsslkrleiqlnnisgEFPDLSSlknlyyLDASDNRISGRIPSFLP--ESIVQISMRNNLFQGTIPES-- 240
Cdd:PLN00113 536 SGQIPASFS-----------------EMPVLSQ------LDLSQNQLSGEIPKNLGnvESLVQVNISHNHLHGSLPSTga 592

                        170       180
                 ....*....|....*....|....*.
gi 15239346  241 FKLLNSLEV---IDL-SHNKLSGSIP 262
Cdd:PLN00113 593 FLAINASAVagnIDLcGGDTTSGLPP 618
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
95-332 3.02e-17

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 83.06  E-value: 3.02e-17
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239346  95 SLSSVSFNLPYLQTLDLSGNYFSGPLPDSLSNLTRLTRLTVSGNSFSGSIPDSVGSMTVLEELVLDSNRLYGsiPASFNG 174
Cdd:COG4886  17 LLELLTTLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLLLLSLLLLG--LTDLGD 94

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239346 175 LSSLKRLEIQLNNisgefpDLSSLKNLYYLDASDNRISgRIPSFLPE--SIVQISMRNNLFQgTIPESFKLLNSLEVIDL 252
Cdd:COG4886  95 LTNLTELDLSGNE------ELSNLTNLESLDLSGNQLT-DLPEELANltNLKELDLSNNQLT-DLPEPLGNLTNLKSLDL 166

                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239346 253 SHNKLSgSIPSFIFTHQSLQQLTLSFNGFTSLEspyySPLGLPSELISVDLSNNQIlGALPLFMGLSPKLSALSLENNKF 332
Cdd:COG4886 167 SNNQLT-DLPEELGNLTNLKELDLSNNQITDLP----EPLGNLTNLEELDLSGNQL-TDLPEPLANLTNLETLDLSNNQL 240
PLN03150 PLN03150
hypothetical protein; Provisional
 18-175 3.31e-17

hypothetical protein; Provisional


Pssm-ID: 178695 [Multi-domain]  Cd Length: 623  Bit Score: 83.71  E-value: 3.31e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239346   18 AESKTFWGDVAALKDFKNSVdaksmspgSCLSSWDFSVDPC---DNIFSDTfTCGFrcDSVvTGSGRVTELSLDQAGYSG 94
Cdd:PLN03150 365 AESKTLLEEVSALQTLKSSL--------GLPLRFGWNGDPCvpqQHPWSGA-DCQF--DST-KGKWFIDGLGLDNQGLRG 432

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239346   95 SLSSVSFNLPYLQTLDLSGNYFSGPLPDSLSNLTRLTRLTVSGNSFSGSIPDSVGSMTVLEELVLDSNRLYGSIPASFNG 174
Cdd:PLN03150 433 FIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRVPAALGG 512


                 .
gi 15239346  175 L 175
Cdd:PLN03150 513 R 513
PLN00113 PLN00113
leucine-rich repeat receptor-like protein kinase; Provisional
 78-193 1.59e-16

leucine-rich repeat receptor-like protein kinase; Provisional


Pssm-ID: 215061 [Multi-domain]  Cd Length: 968  Bit Score: 81.82  E-value: 1.59e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239346   78 GSGRVTELSLDQAGYSGSLSSVSFNLPYLQTLDLSGNYFSGPLPDSLSNLTRLTRLTVSGNSFSGSIPDSVGSMTVLEEL 157
Cdd:PLN00113 473 GSKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQL 552

                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 15239346  158 VLDSNRLYGSIPASFNGLSSLKRLEIQLNNISGEFP 193
Cdd:PLN00113 553 DLSQNQLSGEIPKNLGNVESLVQVNISHNHLHGSLP 588
PLN03150 PLN03150
hypothetical protein; Provisional
 109-193 2.39e-14

hypothetical protein; Provisional


Pssm-ID: 178695 [Multi-domain]  Cd Length: 623  Bit Score: 74.85  E-value: 2.39e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239346  109 LDLSGNYFSGPLPDSLSNLTRLTRLTVSGNSFSGSIPDSVGSMTVLEELVLDSNRLYGSIPASFNGLSSLKRLEIQLNNI 188
Cdd:PLN03150 423 LGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSL 502


                 ....*
gi 15239346  189 SGEFP 193
Cdd:PLN03150 503 SGRVP 507
LRR_RI cd00116
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 ...
 102-282 7.91e-10

Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).


Pssm-ID: 238064 [Multi-domain]  Cd Length: 319  Bit Score: 59.68  E-value: 7.91e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239346 102 NLPYLQTLDLSGNYFSGPLPDSLSNLTR---LTRLTVSGNSFSGSIPDSVG-----SMTVLEELVLDSNRLY--GSIPAS 171
Cdd:cd00116  79 KGCGLQELDLSDNALGPDGCGVLESLLRsssLQELKLNNNGLGDRGLRLLAkglkdLPPALEKLVLGRNRLEgaSCEALA 158

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239346 172 --FNGLSSLKRLEIQLNNISGE-----FPDLSSLKNLYYLDASDNrisgripSFLPESIVQISmrnnlfqgtipESFKLL 244
Cdd:cd00116 159 kaLRANRDLKELNLANNGIGDAgiralAEGLKANCNLEVLDLNNN-------GLTDEGASALA-----------ETLASL 220

                       170       180       190       200
                ....*....|....*....|....*....|....*....|...
gi 15239346 245 NSLEVIDLSHNKLSGSI-----PSFIFTHQSLQQLTLSFNGFT 282
Cdd:cd00116 221 KSLEVLNLGDNNLTDAGaaalaSALLSPNISLLTLSLSCNDIT 263
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
138-332 1.33e-09

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 59.56  E-value: 1.33e-09
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239346 138 NSFSGSIPDSVGSMTVLEELVLDSNRLYGSIPASFNGLSSLKRLEIQLNNISGEFPDLSSLKNLYYLDASDNRISGrIPS 217
Cdd:COG4886   8 LTLKLLLLLLLELLTTLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLLLLS-LLL 86

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239346 218 FLPESIVQISMRNNLFQGTIPESFKLLNsLEVIDLSHNKLSgSIPSFIFTHQSLQQLTLSFNGFTSLEspyySPLGLPSE 297
Cdd:COG4886  87 LGLTDLGDLTNLTELDLSGNEELSNLTN-LESLDLSGNQLT-DLPEELANLTNLKELDLSNNQLTDLP----EPLGNLTN 160

                       170       180       190
                ....*....|....*....|....*....|....*
gi 15239346 298 LISVDLSNNQIlGALPLFMGLSPKLSALSLENNKF 332
Cdd:COG4886 161 LKSLDLSNNQL-TDLPEELGNLTNLKELDLSNNQI 194
PRK15370 PRK15370
type III secretion system effector E3 ubiquitin transferase SlrP;
83-330 2.16e-09

type III secretion system effector E3 ubiquitin transferase SlrP;


Pssm-ID: 185268 [Multi-domain]  Cd Length: 754  Bit Score: 59.33  E-value: 2.16e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239346   83 TELSLDQAGysgsLSSVSFNLP-YLQTLDLSGNYFSGpLPDSL-SNLTRLTRLTVSGNSFSGSIPDSVgsmtvlEELVLD 160
Cdd:PRK15370 181 TELRLKILG----LTTIPACIPeQITTLILDNNELKS-LPENLqGNIKTLYANSNQLTSIPATLPDTI------QEMELS 249

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239346  161 SNRLYgSIPASFNglSSLKRLEIQLNNISGeFPDlSSLKNLYYLDASDNRISGrIPSFLPESIVQISMRNNlfqgtipes 240
Cdd:PRK15370 250 INRIT-ELPERLP--SALQSLDLFHNKISC-LPE-NLPEELRYLSVYDNSIRT-LPAHLPSGITHLNVQSN--------- 314

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239346  241 fkllnslevidlSHNKLSGSIPsfifthQSLQQLTLSFNGFTSLespyysPLGLPSELISVDLSNNQILgALPlfMGLSP 320
Cdd:PRK15370 315 ------------SLTALPETLP------PGLKTLEAGENALTSL------PASLPPELQVLDVSKNQIT-VLP--ETLPP 367

                        250
                 ....*....|
gi 15239346  321 KLSALSLENN 330
Cdd:PRK15370 368 TITTLDVSRN 377
PLN03150 PLN03150
hypothetical protein; Provisional
 142-219 3.03e-08

hypothetical protein; Provisional


Pssm-ID: 178695 [Multi-domain]  Cd Length: 623  Bit Score: 55.59  E-value: 3.03e-08
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 15239346  142 GSIPDSVGSMTVLEELVLDSNRLYGSIPASFNGLSSLKRLEIQLNNISGEFPD-LSSLKNLYYLDASDNRISGRIPSFL 219
Cdd:PLN03150 432 GFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPEsLGQLTSLRILNLNGNSLSGRVPAAL 510
PPP1R42 cd21340
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ...
 102-274 3.12e-08

protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.


Pssm-ID: 411060 [Multi-domain]  Cd Length: 220  Bit Score: 53.64  E-value: 3.12e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239346 102 NLPYLQTLDLSGNYFSGPlpDSLSNLTRLTRLTVSGNSfsgsIpdSV----GSMTVLEELVLDSNRLYGSI-----PASF 172
Cdd:cd21340  44 FLTNLTHLYLQNNQIEKI--ENLENLVNLKKLYLGGNR----I--SVveglENLTNLEELHIENQRLPPGEkltfdPRSL 115

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239346 173 NGLS-SLKRLEIQLNNISgEFPDLSSLKNLYYLDASDNRISgripsflpeSIVQISmrnnlfqgtipESFKLLNSLEVID 251
Cdd:cd21340 116 AALSnSLRVLNISGNNID-SLEPLAPLRNLEQLDASNNQIS---------DLEELL-----------DLLSSWPSLRELD 174

                       170       180
                ....*....|....*....|....*..
gi 15239346 252 LSHNKLSgSIPSF----IFTHQSLQQL 274
Cdd:cd21340 175 LTGNPVC-KKPKYrdkiILASKSLEVL 200
PLN03150 PLN03150
hypothetical protein; Provisional
 218-324 4.37e-08

hypothetical protein; Provisional


Pssm-ID: 178695 [Multi-domain]  Cd Length: 623  Bit Score: 55.21  E-value: 4.37e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239346  218 FLPESIVQ------ISMRNNLFQGTIPESFKLLNSLEVIDLSHNKLSGSIPSFIFTHQSLQQLTLSFNgFTSLESPyYSP 291
Cdd:PLN03150 433 FIPNDISKlrhlqsINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGN-SLSGRVP-AAL 510

                         90       100       110
                 ....*....|....*....|....*....|...
gi 15239346  292 LGLPSELISVDLSNNQILGALPLFMGLSPKLSA 324
Cdd:PLN03150 511 GGRLLHRASFNFTDNAGLCGIPGLRACGPHLSV 543
PLN03150 PLN03150
hypothetical protein; Provisional
 146-263 2.56e-07

hypothetical protein; Provisional


Pssm-ID: 178695 [Multi-domain]  Cd Length: 623  Bit Score: 52.90  E-value: 2.56e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239346  146 DSVGSMTVLEELVLDSNRLYGSIPASFNGLSSLKRLEIQLNNISGEFP-DLSSLKNLYYLDASDNRisgripsflpesiv 224
Cdd:PLN03150 412 DSTKGKWFIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPpSLGSITSLEVLDLSYNS-------------- 477

                         90       100       110
                 ....*....|....*....|....*....|....*....
gi 15239346  225 qismrnnlFQGTIPESFKLLNSLEVIDLSHNKLSGSIPS 263
Cdd:PLN03150 478 --------FNGSIPESLGQLTSLRILNLNGNSLSGRVPA 508
PPP1R42 cd21340
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ...
 127-330 5.50e-07

protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.


Pssm-ID: 411060 [Multi-domain]  Cd Length: 220  Bit Score: 50.17  E-value: 5.50e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239346 127 LTRLTRLTVSGNSFSgSIPDsVGSMTVLEELVLDSNRLYgSIPaSFNGLSSLKRLEIQLNNISgEFPDLSSLKNLYYLDA 206
Cdd:cd21340   1 LKRITHLYLNDKNIT-KIDN-LSLCKNLKVLYLYDNKIT-KIE-NLEFLTNLTHLYLQNNQIE-KIENLENLVNLKKLYL 75

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239346 207 SDNRISgRIpsflpesivqismrnnlfqgtipESFKLLNSLEVIDLSHNKLSGSiPSFIF-------THQSLQQLTLSFN 279
Cdd:cd21340  76 GGNRIS-VV-----------------------EGLENLTNLEELHIENQRLPPG-EKLTFdprslaaLSNSLRVLNISGN 130

                       170       180       190       200       210
                ....*....|....*....|....*....|....*....|....*....|...
gi 15239346 280 GFTSLEspyysPLGLPSELISVDLSNNQILGALPLFMGLS--PKLSALSLENN 330
Cdd:cd21340 131 NIDSLE-----PLAPLRNLEQLDASNNQISDLEELLDLLSswPSLRELDLTGN 178
LRR_8 pfam13855
Leucine rich repeat;
154-211 9.07e-07

Leucine rich repeat;


Pssm-ID: 404697 [Multi-domain]  Cd Length: 61  Bit Score: 45.59  E-value: 9.07e-07
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 15239346   154 LEELVLDSNRLYGSIPASFNGLSSLKRLEIQLNNISGEFPD-LSSLKNLYYLDASDNRI 211
Cdd:pfam13855   3 LRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGaFSGLPSLRYLDLSGNRL 61
PLN03150 PLN03150
hypothetical protein; Provisional
 298-372 9.92e-07

hypothetical protein; Provisional


Pssm-ID: 178695 [Multi-domain]  Cd Length: 623  Bit Score: 50.97  E-value: 9.92e-07
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 15239346  298 LISVDLSNNQILGALPLFMGLSPKLSALSLENNKFFGMIPTqyvwktvSPGsEFAGFQRLLLGGNFLFGVVPGPL 372
Cdd:PLN03150 444 LQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPE-------SLG-QLTSLRILNLNGNSLSGRVPAAL 510
PPP1R42 cd21340
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ...
 122-286 5.82e-05

protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.


Pssm-ID: 411060 [Multi-domain]  Cd Length: 220  Bit Score: 44.01  E-value: 5.82e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239346 122 DSLSNLTRLTRLTVSGNSFSgSIpDSVGSMTVLEELVLDSNRLygSIPASFNGLSSLKRLEIQLNNI-SGE--FPDLSSL 198
Cdd:cd21340  40 ENLEFLTNLTHLYLQNNQIE-KI-ENLENLVNLKKLYLGGNRI--SVVEGLENLTNLEELHIENQRLpPGEklTFDPRSL 115

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239346 199 ----KNLYYLDASDNRIsgripsflpesivqismrnnlfqgTIPESFKLLNSLEVIDLSHNKLSgsipsfifthqSLQQL 274
Cdd:cd21340 116 aalsNSLRVLNISGNNI------------------------DSLEPLAPLRNLEQLDASNNQIS-----------DLEEL 160

                       170
                ....*....|..
gi 15239346 275 TLSFNGFTSLES 286
Cdd:cd21340 161 LDLLSSWPSLRE 172
PLN03150 PLN03150
hypothetical protein; Provisional
 226-320 1.00e-04

hypothetical protein; Provisional


Pssm-ID: 178695 [Multi-domain]  Cd Length: 623  Bit Score: 44.42  E-value: 1.00e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239346  226 ISMRNNLFQGTIPESFKLLNSLEVIDLSHNKLSGSIPSFIFTHQSLQQLTLSFNGFTSL--ESpyyspLGLPSELISVDL 303
Cdd:PLN03150 423 LGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSipES-----LGQLTSLRILNL 497

                         90
                 ....*....|....*..
gi 15239346  304 SNNQILGALPLFMGLSP 320
Cdd:PLN03150 498 NGNSLSGRVPAALGGRL 514
LRR_8 pfam13855
Leucine rich repeat;
104-164 1.51e-04

Leucine rich repeat;


Pssm-ID: 404697 [Multi-domain]  Cd Length: 61  Bit Score: 39.43  E-value: 1.51e-04
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 15239346   104 PYLQTLDLSGNYFSGPLPDSLSNLTRLTRLTVSGNSFSGSIPDSVGSMTVLEELVLDSNRL 164
Cdd:pfam13855   1 PNLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
PLN00113 PLN00113
leucine-rich repeat receptor-like protein kinase; Provisional
 81-181 3.33e-04

leucine-rich repeat receptor-like protein kinase; Provisional


Pssm-ID: 215061 [Multi-domain]  Cd Length: 968  Bit Score: 42.91  E-value: 3.33e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239346   81 RVTELSLDQAGYSGSLSSVSFNLPYLQTLDLSGNYFSGPLPDSLSNLTRLTRLTVSGNSFSGSIPDSVGSMTVLEELVLD 160
Cdd:PLN00113 524 KLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHGSLPSTGAFLAINASAVAG 603

                         90       100
                 ....*....|....*....|.
gi 15239346  161 SNRLYGSIPASfnGLSSLKRL 181
Cdd:PLN00113 604 NIDLCGGDTTS--GLPPCKRV 622
PLN03150 PLN03150
hypothetical protein; Provisional
 250-337 4.88e-04

hypothetical protein; Provisional


Pssm-ID: 178695 [Multi-domain]  Cd Length: 623  Bit Score: 42.50  E-value: 4.88e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239346  250 IDLSHNKLSGSIPSFIFTHQSLQQLTLSFNgftSLESPYYSPLGLPSELISVDLSNNQILGALPLFMGLSPKLSALSLEN 329
Cdd:PLN03150 423 LGLDNQGLRGFIPNDISKLRHLQSINLSGN---SIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNG 499


                 ....*...
gi 15239346  330 NKFFGMIP 337
Cdd:PLN03150 500 NSLSGRVP 507
LRR_8 pfam13855
Leucine rich repeat;
229-281 4.92e-04

Leucine rich repeat;


Pssm-ID: 404697 [Multi-domain]  Cd Length: 61  Bit Score: 37.89  E-value: 4.92e-04
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....
gi 15239346   229 RNNLFQGTIPESFKLLNSLEVIDLSHNKLSGSIP-SFIFTHqSLQQLTLSFNGF 281
Cdd:pfam13855   9 SNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPgAFSGLP-SLRYLDLSGNRL 61
LRR_8 pfam13855
Leucine rich repeat;
81-140 9.32e-04

Leucine rich repeat;


Pssm-ID: 404697 [Multi-domain]  Cd Length: 61  Bit Score: 37.12  E-value: 9.32e-04
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 15239346    81 RVTELSLDqagySGSLSSVS----FNLPYLQTLDLSGNYFSGPLPDSLSNLTRLTRLTVSGNSF 140
Cdd:pfam13855   2 NLRSLDLS----NNRLTSLDdgafKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
LRR_8 pfam13855
Leucine rich repeat;
128-188 6.75e-03

Leucine rich repeat;


Pssm-ID: 404697 [Multi-domain]  Cd Length: 61  Bit Score: 34.81  E-value: 6.75e-03
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 15239346   128 TRLTRLTVSGNSFSGSIPDSVGSMTVLEELVLDSNRLYGSIPASFNGLSSLKRLEIQLNNI 188
Cdd:pfam13855   1 PNLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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