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Conserved domains on  [gi|15239314|ref|NP_201427|]
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SAUR-like auxin-responsive protein family [Arabidopsis thaliana]

Protein Classification

SAUR-like auxin-responsive family protein( domain architecture ID 581161)

SAUR-like auxin-responsive family protein similar to Arabidopsis thaliana SAUR proteins that may provide a mechanistic link between auxin and plasma membrane H(+)-ATPases (PM H(+)-ATPases)

Gene Ontology:  GO:0009733

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PLN03090 super family cl23790
auxin-responsive family protein; Provisional
 11-97 1.01e-44

auxin-responsive family protein; Provisional


The actual alignment was detected with superfamily member PLN03090:

Pssm-ID: 474056  Cd Length: 104  Bit Score: 139.90  E-value: 1.01e-44
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239314   11 LKQMLKRCSSLGKKSSVDVN--FNGVPKGHFVVYVGHSRSRHVIPISFLTHPIFQMLLQQSEEEFGFFQDNGLTIPCDEH 88
Cdd:PLN03090  15 LKQILKRCSSLGKKQGYDEDglPLDVPKGHFPVYVGENRSRYIVPISFLTHPEFQSLLQQAEEEFGFDHDMGLTIPCEEV 94


                 ....*....
gi 15239314   89 FFRALISSI 97
Cdd:PLN03090  95 VFRSLTSMI 103
 
Name Accession Description Interval E-value
PLN03090 PLN03090
auxin-responsive family protein; Provisional
 11-97 1.01e-44

auxin-responsive family protein; Provisional


Pssm-ID: 178639  Cd Length: 104  Bit Score: 139.90  E-value: 1.01e-44
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239314   11 LKQMLKRCSSLGKKSSVDVN--FNGVPKGHFVVYVGHSRSRHVIPISFLTHPIFQMLLQQSEEEFGFFQDNGLTIPCDEH 88
Cdd:PLN03090  15 LKQILKRCSSLGKKQGYDEDglPLDVPKGHFPVYVGENRSRYIVPISFLTHPEFQSLLQQAEEEFGFDHDMGLTIPCEEV 94


                 ....*....
gi 15239314   89 FFRALISSI 97
Cdd:PLN03090  95 VFRSLTSMI 103
Auxin_inducible pfam02519
Auxin responsive protein; This family consists of the protein products of the ARG7 auxin ...
 11-95 2.30e-30

Auxin responsive protein; This family consists of the protein products of the ARG7 auxin responsive genes family none of which have any identified functional role.


Pssm-ID: 460580  Cd Length: 92  Bit Score: 103.10  E-value: 2.30e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239314   11 LKQML-----------KRCSSLGKKSSVDVnfngVPKGHFVVYVGHSRSRHVIPISFLTHPIFQMLLQQSEEEFGFFQDN 79
Cdd:pfam02519  1 LKQMArkwqkraalgrKRISSPRTTSSSDV----PEKGHFVVYVGDERRRFVVPLEYLNHPLFRELLRMSEEEFGFPSDG 76

                         90
                 ....*....|....*.
gi 15239314   80 GLTIPCDEHFFRALIS 95
Cdd:pfam02519 77 PITLPCDVVVFEYLLS 92
 
Name Accession Description Interval E-value
PLN03090 PLN03090
auxin-responsive family protein; Provisional
 11-97 1.01e-44

auxin-responsive family protein; Provisional


Pssm-ID: 178639  Cd Length: 104  Bit Score: 139.90  E-value: 1.01e-44
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239314   11 LKQMLKRCSSLGKKSSVDVN--FNGVPKGHFVVYVGHSRSRHVIPISFLTHPIFQMLLQQSEEEFGFFQDNGLTIPCDEH 88
Cdd:PLN03090  15 LKQILKRCSSLGKKQGYDEDglPLDVPKGHFPVYVGENRSRYIVPISFLTHPEFQSLLQQAEEEFGFDHDMGLTIPCEEV 94


                 ....*....
gi 15239314   89 FFRALISSI 97
Cdd:PLN03090  95 VFRSLTSMI 103
Auxin_inducible pfam02519
Auxin responsive protein; This family consists of the protein products of the ARG7 auxin ...
 11-95 2.30e-30

Auxin responsive protein; This family consists of the protein products of the ARG7 auxin responsive genes family none of which have any identified functional role.


Pssm-ID: 460580  Cd Length: 92  Bit Score: 103.10  E-value: 2.30e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239314   11 LKQML-----------KRCSSLGKKSSVDVnfngVPKGHFVVYVGHSRSRHVIPISFLTHPIFQMLLQQSEEEFGFFQDN 79
Cdd:pfam02519  1 LKQMArkwqkraalgrKRISSPRTTSSSDV----PEKGHFVVYVGDERRRFVVPLEYLNHPLFRELLRMSEEEFGFPSDG 76

                         90
                 ....*....|....*.
gi 15239314   80 GLTIPCDEHFFRALIS 95
Cdd:pfam02519 77 PITLPCDVVVFEYLLS 92
PLN03220 PLN03220
uncharacterized protein; Provisional
 1-96 4.90e-19

uncharacterized protein; Provisional


Pssm-ID: 178759  Cd Length: 105  Bit Score: 74.78  E-value: 4.90e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239314    1 MGVERGS-GKGLKQMLKRCSSLGKKSSVDVNFNGVPKGHFVVYVGHS----RSRHVIPISFLTHPIFQMLLQQSEEEFGF 75
Cdd:PLN03220   1 MGLSRFAiSNATKQILKLNSLANRNRTSSSSSDHVPKGHVAVYVGEQiemeKKRFVVPISFLNHPSFKEFLSRAEEEFGF 80

                         90       100
                 ....*....|....*....|..
gi 15239314   76 FQD-NGLTIPCDEHFFRALISS 96
Cdd:PLN03220  81 NHPmGGLTIPCREEVFLDLIAS 102
PLN03219 PLN03219
uncharacterized protein; Provisional
 1-96 2.76e-17

uncharacterized protein; Provisional


Pssm-ID: 178758 [Multi-domain]  Cd Length: 108  Bit Score: 70.55  E-value: 2.76e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239314    1 MGVERGSGKGLKQMLKRCSSLGKK-----SSVDVNFNGVPKGHFVVYVGHS--RSRHVIPISFLTHPIFQMLLQQSEEEF 73
Cdd:PLN03219   1 MGLMRSMLPNAKQIFKSQSMRNKNgssspSSSTTTSGLVPKGHVAVYVGEQmeKKRFVVPISYLNHPLFREFLNRAEEEC 80

                         90       100
                 ....*....|....*....|....
gi 15239314   74 GFFQD-NGLTIPCDEHFFRALISS 96
Cdd:PLN03219  81 GFHHSmGGLTIPCREESFLHLITS 104
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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