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Conserved domains on  [gi|15239397|ref|NP_200874|]
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plasma membrane intrinsic protein 2;4 [Arabidopsis thaliana]

Protein Classification

MIP/aquaporin family protein( domain architecture ID 11088534)

MIP (Major Intrinsic Protein)/aquaporin family protein similar to aquaporin that permits osmotically driven movement of water in both directions, and glycerol uptake facilitator protein that mediates glycerol diffusion across the cytoplasmic membrane via a pore-type mechanism

CATH:  1.20.1080.10
Gene Ontology:  GO:0055085|GO:0015267
SCOP:  3000508
TCDB:  1.A.8

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
MIP pfam00230
Major intrinsic protein; MIP (Major Intrinsic Protein) family proteins exhibit essentially two ...
31-266 6.70e-93

Major intrinsic protein; MIP (Major Intrinsic Protein) family proteins exhibit essentially two distinct types of channel properties: (1) specific water transport by the aquaporins, and (2) small neutral solutes transport, such as glycerol by the glycerol facilitators.


:

Pssm-ID: 395174 [Multi-domain]  Cd Length: 223  Bit Score: 274.19  E-value: 6.70e-93
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239397    31 ELRKWPLYRAVIAEFVATLLFLYVSILTVIGYKAQTDataggvDCGGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAV 110
Cdd:pfam00230   1 ELRSVSFLRAVIAEFLATLLFVFFGVGSALGVKKLVS------SLAVSGLLAVALAFGLALATLVYCAGHISGAHLNPAV 74
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239397   111 TVGLFLARKVSLVRTVLYIVAQCLGAICGCGFVKAFQSSyYTRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATD 190
Cdd:pfam00230  75 TLALLVGRRFSLLRAIFYIVAQLLGAIAGAALLYGVTVG-LQRAGLFANTLAPGVNAGQAFVVEIILTFQLVYCVFATTD 153
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 15239397   191 PKRNARDSHVpvlAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNekaWDDQWIFWVGPMIGAAAAAFYH 266
Cdd:pfam00230 154 DRRNGSLGTV---APLAIGFAVFLNHLAGGPYTGASMNPARSFGPAVVLWK---WDDHWVYWVGPFIGAALGALVY 223
 
Name Accession Description Interval E-value
MIP pfam00230
Major intrinsic protein; MIP (Major Intrinsic Protein) family proteins exhibit essentially two ...
31-266 6.70e-93

Major intrinsic protein; MIP (Major Intrinsic Protein) family proteins exhibit essentially two distinct types of channel properties: (1) specific water transport by the aquaporins, and (2) small neutral solutes transport, such as glycerol by the glycerol facilitators.


Pssm-ID: 395174 [Multi-domain]  Cd Length: 223  Bit Score: 274.19  E-value: 6.70e-93
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239397    31 ELRKWPLYRAVIAEFVATLLFLYVSILTVIGYKAQTDataggvDCGGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAV 110
Cdd:pfam00230   1 ELRSVSFLRAVIAEFLATLLFVFFGVGSALGVKKLVS------SLAVSGLLAVALAFGLALATLVYCAGHISGAHLNPAV 74
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239397   111 TVGLFLARKVSLVRTVLYIVAQCLGAICGCGFVKAFQSSyYTRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATD 190
Cdd:pfam00230  75 TLALLVGRRFSLLRAIFYIVAQLLGAIAGAALLYGVTVG-LQRAGLFANTLAPGVNAGQAFVVEIILTFQLVYCVFATTD 153
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 15239397   191 PKRNARDSHVpvlAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNekaWDDQWIFWVGPMIGAAAAAFYH 266
Cdd:pfam00230 154 DRRNGSLGTV---APLAIGFAVFLNHLAGGPYTGASMNPARSFGPAVVLWK---WDDHWVYWVGPFIGAALGALVY 223
MIP cd00333
Major intrinsic protein (MIP) superfamily. Members of the MIP superfamily function as membrane ...
39-269 8.95e-75

Major intrinsic protein (MIP) superfamily. Members of the MIP superfamily function as membrane channels that selectively transport water, small neutral molecules, and ions out of and between cells. The channel proteins share a common fold: the N-terminal cytosolic portion followed by six transmembrane helices, which might have arisen through gene duplication. On the basis of sequence similarity and functional characteristics, the superfamily can be subdivided into two major groups: water-selective channels called aquaporins (AQPs) and glycerol uptake facilitators (GlpFs). AQPs are found in all three kingdoms of life, while GlpFs have been characterized only within microorganisms.


Pssm-ID: 238204  Cd Length: 228  Bit Score: 228.29  E-value: 8.95e-75
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239397  39 RAVIAEFVATLLFLYVSILTVIGYKAQTDAtaggvdcgGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTVGLFLAR 118
Cdd:cd00333   1 RKYLAEFLGTFLLVFFGCGSVLAVKLAGGA--------SGGLLGIALAWGFAIFVLVYAVGHISGGHINPAVTLALAVGG 72
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239397 119 KVSLVRTVLYIVAQCLGAICGCGFVKAFQSSYYTRYGGGAN--------ELADGYNKGTGLGAEIIGTFVLVYTVFSATD 190
Cdd:cd00333  73 RFPLIRVIPYIIAQLLGAILGAALLYGLYYGLYLEFLGANNivagifgtYPSPGVSNGNAFFVEFIGTFILVLVVFATTD 152
                       170       180       190       200       210       220       230
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 15239397 191 PKRNArdsHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNEKAWDDQWIFWVGPMIGAAAAAFYHQFI 269
Cdd:cd00333 153 DPNGP---PPGGLAPLAIGLLVAAIGLAGGPITGASMNPARSLGPALFTGLARHWHYFWVYWVGPLIGAIAGALVYDYV 228
MIP TIGR00861
MIP family channel proteins; 1.A.8 The Major Intrinsic Protein (MIP) FamilyThe MIP family is ...
43-266 1.57e-60

MIP family channel proteins; 1.A.8 The Major Intrinsic Protein (MIP) FamilyThe MIP family is large and diverse, possessing over 100 members that all form transmembrane channels. These channel proteins function in water, smallcarbohydrate (e.g., glycerol), urea, NH3, CO2 and possibly ion transport by an energy independent mechanism. They are found ubiquitously in bacteria, archaeaand eukaryotes. The MIP family contains two major groups of channels: aquaporins and glycerol facilitators.The known aquaporins cluster loosely together as do the known glycerol facilitators. MIP family proteins are believed to form aqueous pores that selectively allow passive transport of their solute(s) across the membrane with minimal apparent recognition. Aquaporins selectively transport water (but not glycerol) while glycerol facilitators selectively transport glycerol but not water. Some aquaporins can transport NH3 and CO2. Glycerol facilitators function as solute nonspecific channels, and may transport glycerol, dihydroxyacetone, propanediol, urea and other small neutral molecules in physiologically importantprocesses. Some members of the family, including the yeast FPS protein (TC #1.A.8.5.1) and tobacco NtTIPA may transport both water and small solutes. [Transport and binding proteins, Unknown substrate]


Pssm-ID: 273306 [Multi-domain]  Cd Length: 216  Bit Score: 191.36  E-value: 1.57e-60
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239397    43 AEFVATLLFLYVSILTVigykAQTDATAGGVDCGGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTVGLFLARKVSL 122
Cdd:TIGR00861   1 AEFLGTFLLVFFGVGSA----LGVNVAGAYGAVGGGQFLGVALAFGLAVATLVYCVGGISGAHLNPAVTIALLLGRRFPL 76
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239397   123 VRTVLYIVAQCLGAICGCGFVKAFQSSYYTRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDpKRNARDSHvpV 202
Cdd:TIGR00861  77 KRVPVYIVAQLIGAILGAALLYGLTSGLFPGNLAVNGSASAGVSSGQAFFVEFIGTAILVLVIFATTD-DRNRVPRG--G 153
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 15239397   203 LAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIyNNEKAWDDQWIFWVGPMIGAAAAAFYH 266
Cdd:TIGR00861 154 FAPLAIGLLVFLIHLSMGPYTGTGMNPARSLGPALF-AGLAGWGNHWVYWVGPIIGAILGALVY 216
GlpF COG0580
Glycerol uptake facilitator or related aquaporin (Major Intrinsic protein Family) ...
36-271 9.66e-54

Glycerol uptake facilitator or related aquaporin (Major Intrinsic protein Family) [Carbohydrate transport and metabolism];


Pssm-ID: 440345 [Multi-domain]  Cd Length: 232  Bit Score: 174.54  E-value: 9.66e-54
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239397  36 PLYRAVIAEFVATLLFLYVSILTVIGYKAQTdataggvdcGGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTVGLF 115
Cdd:COG0580   1 SLMKRLLAEFLGTFILVLLGCGVVAVLAGTK---------GGIGWLGIALAWGLAVLAGVYAFGHISGAHLNPAVTLALA 71
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239397 116 LARKVSLVRTVLYIVAQCLGAICGCGFVKAFQSSYYTRYGGGANEL-------ADGYNKGTGLGAEIIGTFVLVYTVFSA 188
Cdd:COG0580  72 VAGRFPWKDVLPYIIAQLLGAFLGAALVYLIYGGHFDATEDGGAKLgvfatspAIGYSLGAAFLTEIIGTFVLVFVILGI 151
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239397 189 TDPKRNARdshvpVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNEK---AWDDQWIFWVGPMIGAAAAAFY 265
Cdd:COG0580 152 TDKRAAPG-----GLAPLAIGLLVAAIGLSLGPLTGYAINPARDLGPRLFHALGKggsDWGYLWVPIVAPILGAALAALL 226

                ....*.
gi 15239397 266 HQFILR 271
Cdd:COG0580 227 YRALFG 232
PLN00166 PLN00166
aquaporin TIP2; Provisional
39-266 1.00e-36

aquaporin TIP2; Provisional


Pssm-ID: 165733  Cd Length: 250  Bit Score: 131.21  E-value: 1.00e-36
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239397   39 RAVIAEFVATLLFLYVSILTVIGYKAQTdaTAGGVDCGGVGILGIAWAFGgmIFVLVYCTAGISGGHINPAVTVGLFLAR 118
Cdd:PLN00166  19 KAYLSEFIATLLFVFAGVGSAIAFAKLT--SDAALDPAGLVAVAVAHAFA--LFVGVSIAANISGGHLNPAVTLGLAIGG 94
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239397  119 KVSLVRTVLYIVAQCLGAICGCGFVKAFQSSYYTRYGGganeLADGYNKGTGLGAEIIGTFVLVYTVF-SATDPKRNArd 197
Cdd:PLN00166  95 NITIITGFFYWIAQCLGSIVACLLLVFVTNGESVPTHG----VAAGLGAIEGVVMEIVVTFALVYTVYaTAADPKKGS-- 168
                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 15239397  198 shVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNekaWDDQWIFWVGPMIGAAAAAFYH 266
Cdd:PLN00166 169 --LGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVSGD---FSQIWIYWVGPLVGGALAGLIY 232
 
Name Accession Description Interval E-value
MIP pfam00230
Major intrinsic protein; MIP (Major Intrinsic Protein) family proteins exhibit essentially two ...
31-266 6.70e-93

Major intrinsic protein; MIP (Major Intrinsic Protein) family proteins exhibit essentially two distinct types of channel properties: (1) specific water transport by the aquaporins, and (2) small neutral solutes transport, such as glycerol by the glycerol facilitators.


Pssm-ID: 395174 [Multi-domain]  Cd Length: 223  Bit Score: 274.19  E-value: 6.70e-93
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239397    31 ELRKWPLYRAVIAEFVATLLFLYVSILTVIGYKAQTDataggvDCGGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAV 110
Cdd:pfam00230   1 ELRSVSFLRAVIAEFLATLLFVFFGVGSALGVKKLVS------SLAVSGLLAVALAFGLALATLVYCAGHISGAHLNPAV 74
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239397   111 TVGLFLARKVSLVRTVLYIVAQCLGAICGCGFVKAFQSSyYTRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATD 190
Cdd:pfam00230  75 TLALLVGRRFSLLRAIFYIVAQLLGAIAGAALLYGVTVG-LQRAGLFANTLAPGVNAGQAFVVEIILTFQLVYCVFATTD 153
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 15239397   191 PKRNARDSHVpvlAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNekaWDDQWIFWVGPMIGAAAAAFYH 266
Cdd:pfam00230 154 DRRNGSLGTV---APLAIGFAVFLNHLAGGPYTGASMNPARSFGPAVVLWK---WDDHWVYWVGPFIGAALGALVY 223
MIP cd00333
Major intrinsic protein (MIP) superfamily. Members of the MIP superfamily function as membrane ...
39-269 8.95e-75

Major intrinsic protein (MIP) superfamily. Members of the MIP superfamily function as membrane channels that selectively transport water, small neutral molecules, and ions out of and between cells. The channel proteins share a common fold: the N-terminal cytosolic portion followed by six transmembrane helices, which might have arisen through gene duplication. On the basis of sequence similarity and functional characteristics, the superfamily can be subdivided into two major groups: water-selective channels called aquaporins (AQPs) and glycerol uptake facilitators (GlpFs). AQPs are found in all three kingdoms of life, while GlpFs have been characterized only within microorganisms.


Pssm-ID: 238204  Cd Length: 228  Bit Score: 228.29  E-value: 8.95e-75
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239397  39 RAVIAEFVATLLFLYVSILTVIGYKAQTDAtaggvdcgGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTVGLFLAR 118
Cdd:cd00333   1 RKYLAEFLGTFLLVFFGCGSVLAVKLAGGA--------SGGLLGIALAWGFAIFVLVYAVGHISGGHINPAVTLALAVGG 72
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239397 119 KVSLVRTVLYIVAQCLGAICGCGFVKAFQSSYYTRYGGGAN--------ELADGYNKGTGLGAEIIGTFVLVYTVFSATD 190
Cdd:cd00333  73 RFPLIRVIPYIIAQLLGAILGAALLYGLYYGLYLEFLGANNivagifgtYPSPGVSNGNAFFVEFIGTFILVLVVFATTD 152
                       170       180       190       200       210       220       230
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 15239397 191 PKRNArdsHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNEKAWDDQWIFWVGPMIGAAAAAFYHQFI 269
Cdd:cd00333 153 DPNGP---PPGGLAPLAIGLLVAAIGLAGGPITGASMNPARSLGPALFTGLARHWHYFWVYWVGPLIGAIAGALVYDYV 228
MIP TIGR00861
MIP family channel proteins; 1.A.8 The Major Intrinsic Protein (MIP) FamilyThe MIP family is ...
43-266 1.57e-60

MIP family channel proteins; 1.A.8 The Major Intrinsic Protein (MIP) FamilyThe MIP family is large and diverse, possessing over 100 members that all form transmembrane channels. These channel proteins function in water, smallcarbohydrate (e.g., glycerol), urea, NH3, CO2 and possibly ion transport by an energy independent mechanism. They are found ubiquitously in bacteria, archaeaand eukaryotes. The MIP family contains two major groups of channels: aquaporins and glycerol facilitators.The known aquaporins cluster loosely together as do the known glycerol facilitators. MIP family proteins are believed to form aqueous pores that selectively allow passive transport of their solute(s) across the membrane with minimal apparent recognition. Aquaporins selectively transport water (but not glycerol) while glycerol facilitators selectively transport glycerol but not water. Some aquaporins can transport NH3 and CO2. Glycerol facilitators function as solute nonspecific channels, and may transport glycerol, dihydroxyacetone, propanediol, urea and other small neutral molecules in physiologically importantprocesses. Some members of the family, including the yeast FPS protein (TC #1.A.8.5.1) and tobacco NtTIPA may transport both water and small solutes. [Transport and binding proteins, Unknown substrate]


Pssm-ID: 273306 [Multi-domain]  Cd Length: 216  Bit Score: 191.36  E-value: 1.57e-60
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239397    43 AEFVATLLFLYVSILTVigykAQTDATAGGVDCGGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTVGLFLARKVSL 122
Cdd:TIGR00861   1 AEFLGTFLLVFFGVGSA----LGVNVAGAYGAVGGGQFLGVALAFGLAVATLVYCVGGISGAHLNPAVTIALLLGRRFPL 76
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239397   123 VRTVLYIVAQCLGAICGCGFVKAFQSSYYTRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDpKRNARDSHvpV 202
Cdd:TIGR00861  77 KRVPVYIVAQLIGAILGAALLYGLTSGLFPGNLAVNGSASAGVSSGQAFFVEFIGTAILVLVIFATTD-DRNRVPRG--G 153
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 15239397   203 LAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIyNNEKAWDDQWIFWVGPMIGAAAAAFYH 266
Cdd:TIGR00861 154 FAPLAIGLLVFLIHLSMGPYTGTGMNPARSLGPALF-AGLAGWGNHWVYWVGPIIGAILGALVY 216
GlpF COG0580
Glycerol uptake facilitator or related aquaporin (Major Intrinsic protein Family) ...
36-271 9.66e-54

Glycerol uptake facilitator or related aquaporin (Major Intrinsic protein Family) [Carbohydrate transport and metabolism];


Pssm-ID: 440345 [Multi-domain]  Cd Length: 232  Bit Score: 174.54  E-value: 9.66e-54
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239397  36 PLYRAVIAEFVATLLFLYVSILTVIGYKAQTdataggvdcGGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTVGLF 115
Cdd:COG0580   1 SLMKRLLAEFLGTFILVLLGCGVVAVLAGTK---------GGIGWLGIALAWGLAVLAGVYAFGHISGAHLNPAVTLALA 71
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239397 116 LARKVSLVRTVLYIVAQCLGAICGCGFVKAFQSSYYTRYGGGANEL-------ADGYNKGTGLGAEIIGTFVLVYTVFSA 188
Cdd:COG0580  72 VAGRFPWKDVLPYIIAQLLGAFLGAALVYLIYGGHFDATEDGGAKLgvfatspAIGYSLGAAFLTEIIGTFVLVFVILGI 151
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239397 189 TDPKRNARdshvpVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNEK---AWDDQWIFWVGPMIGAAAAAFY 265
Cdd:COG0580 152 TDKRAAPG-----GLAPLAIGLLVAAIGLSLGPLTGYAINPARDLGPRLFHALGKggsDWGYLWVPIVAPILGAALAALL 226

                ....*.
gi 15239397 266 HQFILR 271
Cdd:COG0580 227 YRALFG 232
PLN00166 PLN00166
aquaporin TIP2; Provisional
39-266 1.00e-36

aquaporin TIP2; Provisional


Pssm-ID: 165733  Cd Length: 250  Bit Score: 131.21  E-value: 1.00e-36
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239397   39 RAVIAEFVATLLFLYVSILTVIGYKAQTdaTAGGVDCGGVGILGIAWAFGgmIFVLVYCTAGISGGHINPAVTVGLFLAR 118
Cdd:PLN00166  19 KAYLSEFIATLLFVFAGVGSAIAFAKLT--SDAALDPAGLVAVAVAHAFA--LFVGVSIAANISGGHLNPAVTLGLAIGG 94
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239397  119 KVSLVRTVLYIVAQCLGAICGCGFVKAFQSSYYTRYGGganeLADGYNKGTGLGAEIIGTFVLVYTVF-SATDPKRNArd 197
Cdd:PLN00166  95 NITIITGFFYWIAQCLGSIVACLLLVFVTNGESVPTHG----VAAGLGAIEGVVMEIVVTFALVYTVYaTAADPKKGS-- 168
                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 15239397  198 shVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNekaWDDQWIFWVGPMIGAAAAAFYH 266
Cdd:PLN00166 169 --LGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVSGD---FSQIWIYWVGPLVGGALAGLIY 232
PLN00027 PLN00027
aquaporin TIP; Provisional
39-269 3.96e-35

aquaporin TIP; Provisional


Pssm-ID: 177664  Cd Length: 252  Bit Score: 127.21  E-value: 3.96e-35
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239397   39 RAVIAEFVATLLFLYVSILTVIGYKAQTDAtaGGVDCGGVGILGIAWAFGgmIFVLVYCTAGISGGHINPAVTVGLFLAR 118
Cdd:PLN00027  21 KAALAEFISTLIFVFAGEGSGMAFNKLTDN--GSTTPAGLVAAALAHAFA--LFVAVSVGANISGGHVNPAVTFGAFIGG 96
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239397  119 KVSLVRTVLYIVAQCLGAICGCGFVKaFQSSYYTRyggGANELADGYNKGTGLGAEIIGTFVLVYTVF-SATDPKRnard 197
Cdd:PLN00027  97 NITLLRGILYWIAQLLGSVVACLLLK-FSTGGLET---SAFSLSSGVGVWNAFVFEIVMTFGLVYTVYaTAVDPKK---- 168
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 15239397  198 SHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNekaWDDQWIFWVGPMIGAAAAAFYHQFI 269
Cdd:PLN00027 169 GDLGIIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSWT---WTNHWVYWAGPLIGGGIAGLVYELI 237
PRK05420 PRK05420
aquaporin Z; Provisional
77-270 5.42e-33

aquaporin Z; Provisional


Pssm-ID: 235453 [Multi-domain]  Cd Length: 231  Bit Score: 120.84  E-value: 5.42e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239397   77 GVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTVGLFLARKVSLVRTVLYIVAQCLGAICGCGFVKAFQSSY----YT 152
Cdd:PRK05420  33 GIGFLGVALAFGLTVLTMAYAVGHISGGHFNPAVSVGLWAGGRFPAKELVPYIIAQVVGGIAAAAVLYLIASGKagfdLA 112
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239397  153 RYGGGANELAD----GYNKGTGLGAEIIGTFVLVYTVFSATdpkrnarDSHVPV-LAPLPIGFAVFMVHLATIPITGTGI 227
Cdd:PRK05420 113 GSGFASNGYGEhspgGYSLLAALVCEVVLTAFFLLVILGAT-------DKRAPAgFAPIAIGLALTLIHLISIPVTNTSV 185
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|...
gi 15239397  228 NPARSFGAAVIYNNEkAWDDQWIFWVGPMIGAAAAAFYHQFIL 270
Cdd:PRK05420 186 NPARSTGVALFVGGW-ALEQLWLFWVAPIVGAIIGGLIYRLLL 227
PLN00167 PLN00167
aquaporin TIP5; Provisional
39-264 5.98e-29

aquaporin TIP5; Provisional


Pssm-ID: 215085  Cd Length: 256  Bit Score: 110.76  E-value: 5.98e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239397   39 RAVIAEFVATLLFLYVSILTVIGY-KAQTDATAggvDCGGVGILGIAWAFGgmIFVLVYCTAGISGGHINPAVTVGLFLA 117
Cdd:PLN00167  23 RSYLAEFISTFFFVFAAVGSAMSSrKLMPDAAS---DPSSLLIVAIANAFA--LSSAVYIAANISGGHVNPAVTFGMAVG 97
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239397  118 RKVSLVRTVLYIVAQCLGAICGCGFVKAFQSSYYTRYGGGANELadgynkgTGLGAEIIG---TFVLVYTVFSATDPKRn 194
Cdd:PLN00167  98 GHISVPTAMFYWISQMLASVMACLFLKVTTVGQHVPTYKIAEEM-------TGFGASVLEgvlTFGLVYTVYAAGDPRR- 169
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239397  195 ardSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNEKawdDQWIFWVGPMIGAAAAAF 264
Cdd:PLN00167 170 ---GLLGAIGPLAIGLVAGANVLAAGPFSGGSMNPACAFGSAVVAGSFK---NQAVYWVGPLLGGAVAGL 233
PTZ00016 PTZ00016
aquaglyceroporin; Provisional
14-270 6.37e-21

aquaglyceroporin; Provisional


Pssm-ID: 240230 [Multi-domain]  Cd Length: 294  Bit Score: 90.18  E-value: 6.37e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239397   14 AARDYKDPPPAPFFDMEELRkwPLYRAVIAEFVATLLFLYVSILTVIGYkaQTDATAGGVDCggvgiLGIAWAFGgmIFV 93
Cdd:PTZ00016  28 AEAQKRPPGGQNFWAPREYR--PNVREYVAEFLGTFVLLFFGEGVVATT--HTVGNNGDYLA-----ITIGWGLG--VTF 96
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239397   94 LVYCTAGISGGHINPAVTVGLFLARKVSLVRTVLYIVAQCLGAICGCGFVKAFQSSYYTRYGGGANELADGYNKGTGLGA 173
Cdd:PTZ00016  97 GLLVSAGISGGHLNPAVTLGNAVFGKFPWKKLPGYFVAQLLGAFVGAACVYGLYYGFFKDHGIPELPWETMANGFAGVFA 176
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239397  174 -------------EIIGTFVLVYTVFSATDPKRNARDSHVPVlaplPIGFAVFMVHLATIPITGTGINPARSFGA----A 236
Cdd:PTZ00016 177 typregnfyaifsELILTAILLLVILAITDPNNCPAFNYLPV----AVGLLVFVIGISFGGNTGYALNPARDLGPrlfsA 252
                        250       260       270
                 ....*....|....*....|....*....|....*..
gi 15239397  237 VIYNNEKAWDDQWIFW---VGPMIGAAAAAFYHQFIL 270
Cdd:PTZ00016 253 ILWGSEVFTKDNYYFWvplVAPFVGAVLGMFLYDKFI 289
PLN00183 PLN00183
putative aquaporin NIP7; Provisional
39-271 4.02e-19

putative aquaporin NIP7; Provisional


Pssm-ID: 215092  Cd Length: 274  Bit Score: 84.91  E-value: 4.02e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239397   39 RAVIAEFVATLLFLYvsilTVIGYKAQTDATAGGVdcggvGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTVGLFLAR 118
Cdd:PLN00183  46 RMVLAEMVGTFILMF----CVCGIIASTQLSGGEV-----GLLEYAATAGLTVVVVVFSIGSISGAHVNPSVTIAFATFG 116
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239397  119 KVSLVRTVLYIVAQCLGAICGCGFVKAFqssyytrYGGGANELADGYNKG--TGLGAEIIGTFVLVYTVFSATDPKRNAR 196
Cdd:PLN00183 117 HFPWSKVPLYITAQTVGSVLATYVGVSV-------YGVKADLMTTKPAQGcsSAFWVEFIATFIVMFLAASLTSQPQSLG 189
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 15239397  197 DshvpvLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIynnekAWD--DQWIFWVGPMIGAAAAAF-YHQFILR 271
Cdd:PLN00183 190 H-----LSGFVIGIAIGLAVLITGPVSGGSMNPARSLGPAIV-----SWDfkDIWIYITAPTIGAVAGALmFHLLRLR 257
PLN00182 PLN00182
putative aquaporin NIP4; Provisional
76-287 6.16e-19

putative aquaporin NIP4; Provisional


Pssm-ID: 165748  Cd Length: 283  Bit Score: 84.58  E-value: 6.16e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239397   76 GGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTVGLFLARKVSLVRTVLYIVAQCLGAICGCGFVK-AFQSSYYTRY 154
Cdd:PLN00182  71 GTITFPGICVTWGLIVMVMIYSTGHISGAHFNPAVTVTFAIFRRFPWYQVPLYIGAQLTGSLLASLTLRlMFNVTPEAFF 150
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239397  155 GGGANEladgyNKGTGLGAEIIGTFVLVYTVFSATDPKRNARDshvpvLAPLPIGFAVFMVHLATIPITGTGINPARSFG 234
Cdd:PLN00182 151 GTTPTD-----SSGQALVAEIIISFLLMFVISGVATDSRAVGE-----LAGIAVGMTIILNVFVAGPISGASMNPARSLG 220
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|...
gi 15239397  235 AAVIYNNEKAWddqWIFWVGPMIGAAAAAFYHQFILRAAaiKALGSFGSFGSF 287
Cdd:PLN00182 221 PAIVMGRYKGI---WVYIVGPFVGIIAGGFVYNLIRFTD--KPLRELTKSASF 268
PLN00184 PLN00184
aquaporin NIP1; Provisional
36-269 6.95e-18

aquaporin NIP1; Provisional


Pssm-ID: 177778  Cd Length: 296  Bit Score: 81.61  E-value: 6.95e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239397   36 PLYRAVIAEFVATLLFLYVSILTVIgYKAQTDATaggvdcggVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTVGLF 115
Cdd:PLN00184  52 PFLQKLIAEVLGTYFLVFTGCASVV-VNMQNDNV--------VTLPGIAIVWGLTIMVLIYSLGHISGAHINPAVTIAFA 122
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239397  116 LARKVSLVRTVLYIVAQCLGAICGCGFVKAFQSSYYTRYGGGANELADGYNKGTGLGA---EIIGTFVLVYTVFS-ATDp 191
Cdd:PLN00184 123 SCGRFPLKQVPAYVISQVIGSTLAAATLRLLFGLDHDVCSGKHDVFIGSSPVGSDLQAfvmEFIVTFYLMFIISGvATD- 201
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 15239397  192 krnarDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNEKAWddqWIFWVGPMIGAAAAAFYHQFI 269
Cdd:PLN00184 202 -----NRAIGELAGLAIGSTVLLNVLIAAPVSSASMNPGRSLGPAMVYGCYKGI---WIYIVAPTLGAIAGAWVYNTV 271
PLN00026 PLN00026
aquaporin NIP; Provisional
37-263 4.17e-17

aquaporin NIP; Provisional


Pssm-ID: 177663 [Multi-domain]  Cd Length: 298  Bit Score: 79.52  E-value: 4.17e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239397   37 LYRAVIAEFVATLLFLYVSILTVIgYKAQTDataggvdcGGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTVGLFL 116
Cdd:PLN00026  70 LTRKLGAEFVGTFILIFAATAGPI-VNQKYD--------GAETLIGNAACAGLAVMIVILSTGHISGAHLNPSLTIAFAA 140
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239397  117 ARKVSLVRTVLYIVAQCLGAICGcGFvkAFQSSYYTRYGGGANELADGYnkGTGLGAEIIGTFVLVYTVFS-ATDPKRna 195
Cdd:PLN00026 141 LRHFPWKHVPAYIAAQVSASICA-SF--ALKGVFHPFMSGGVTVPSVST--GQAFALEFIITFNLLFVVTAvATDTRA-- 213
                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 15239397  196 rdshVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNEKAWddqWIFWVGPMIGAAAAA 263
Cdd:PLN00026 214 ----VGELAGIAVGATVMLNILVAGPSTGGSMNPVRTLGPAVAAGNYRAI---WIYLVAPTLGALAGA 274
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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