|
Name |
Accession |
Description |
Interval |
E-value |
| PLN03210 |
PLN03210 |
Resistant to P. syringae 6; Provisional |
13-979 |
0e+00 |
|
Resistant to P. syringae 6; Provisional
Pssm-ID: 215633 [Multi-domain] Cd Length: 1153 Bit Score: 901.16 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239799 13 WKYDVFPSFRGEDVRGNFLSHLMKEFESKGIVTFKDDLIERSQTIGLELKEAVRQSKIFVVIFSKNYASSSWCLDELVEI 92
Cdd:PLN03210 11 WVYDVFPSFSGEDVRITFLSHFLKELDRKLIIAFKDNEIERSQSLDPELKQAIRDSRIAVVVFSKNYASSSWCLNELLEI 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239799 93 LKCKEE--RRLIPIFYKVNPSDVRNQTGKFGRGFRETCEGKNDETQNKWKAALTEAANIAGEDSQSWKNEADFLTKIAKD 170
Cdd:PLN03210 91 VRCKEElgQLVIPVFYGLDPSHVRKQTGDFGEAFEKTCQNKTEDEKIQWKQALTDVANILGYHSQNWPNEAKMIEEIAND 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239799 171 ILAKLNGTPSNDFENIIGIESHMEKMVQLLCLNDDDVRMVGIWGPAGIGKTTIARVLHSRFSGDFRFTVFMENVRGNYQR 250
Cdd:PLN03210 171 VLGKLNLTPSNDFEDFVGIEDHIAKMSSLLHLESEEVRMVGIWGSSGIGKTTIARALFSRLSRQFQSSVFIDRAFISKSM 250
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239799 251 IVDSGG---EYNLQARLQKEFLPIIFNQKDRKINHLWKIEERLKKQKVLIVLGDVDKVEQLEALANETRWFGPGSRIIVT 327
Cdd:PLN03210 251 EIYSSAnpdDYNMKLHLQRAFLSEILDKKDIKIYHLGAMEERLKHRKVLIFIDDLDDQDVLDALAGQTQWFGSGSRIIVI 330
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239799 328 TKDKQILVGHEINHIYEVKLPCRKTALEILCLYAFKQNVAPDDFMDVVVEVAELSGHLPLGLRVLGSHMRGKSKDRWKLE 407
Cdd:PLN03210 331 TKDKHFLRAHGIDHIYEVCLPSNELALEMFCRSAFKKNSPPDGFMELASEVALRAGNLPLGLNVLGSYLRGRDKEDWMDM 410
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239799 408 LGRLTTSLDEKVEKILKISYDDLHIR-DKALFLHIACMFNGENIDLVKQMLVNSDLDVSLGLQLLLDKSLIQINDDrEIV 486
Cdd:PLN03210 411 LPRLRNGLDGKIEKTLRVSYDGLNNKkDKAIFRHIACLFNGEKVNDIKLLLANSDLDVNIGLKNLVDKSLIHVRED-IVE 489
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239799 487 MHSLLLKMGKEVVCQHSSEPGKRQFLFNTKETCNILSNNTGSEAVLGISLDTSEIqNDVFMSERVFEDMRNLKFLRFYNK 566
Cdd:PLN03210 490 MHSLLQEMGKEIVRAQSNEPGEREFLVDAKDICDVLEDNTGTKKVLGITLDIDEI-DELHIHENAFKGMRNLLFLKFYTK 568
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239799 567 KIDENPSLKLHLPRGLNYLPA-VRLLHWDSYPMKYIPSQFRPECLVELRMMHSKVVKLWEGTQTLAYLKTIDLSFSNNLV 645
Cdd:PLN03210 569 KWDQKKEVRWHLPEGFDYLPPkLRLLRWDKYPLRCMPSNFRPENLVKLQMQGSKLEKLWDGVHSLTGLRNIDLRGSKNLK 648
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239799 646 EVPDLSKAISLETLCLEGCQSLAELPSSVLNLHRLKWLRLTMCEKLEVIPLHINLASLEVLDMEGCLKLKSFPDISKNIE 725
Cdd:PLN03210 649 EIPDLSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGINLKSLYRLNLSGCSRLKSFPDISTNIS 728
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239799 726 RIFMKNTGIEEIP----------------PSISQWSR------------------------------------------- 746
Cdd:PLN03210 729 WLDLDETAIEEFPsnlrlenldelilcemKSEKLWERvqpltplmtmlspsltrlflsdipslvelpssiqnlhklehle 808
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239799 747 ------------------LESLDISGCLNLKIFSHVPKSVVYIYLTDSGIERLPDCIKDLTWLHYLYVDNCRKLVSLPEL 808
Cdd:PLN03210 809 iencinletlptginlesLESLDLSGCSRLRTFPDISTNISDLNLSRTGIEEVPWWIEKFSNLSFLDMNGCNNLQRVSLN 888
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239799 809 PSSIKILSAI---NCESLERIS---SSFDCPNA------------KVEFSKSMNFDGEArrVITQQWVYKRACLPGKEVP 870
Cdd:PLN03210 889 ISKLKHLETVdfsDCGALTEASwngSPSEVAMAtdnihsklpstvCINFINCFNLDQEA--LLQQQSIFKQLILSGEEVP 966
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239799 871 LEFSHRARGGSLT-IHLEDENVCSSSLRFKACIL-----LFPSERNNICTVYCRLIGESGRLIAA----HRFGGVVKDfv 940
Cdd:PLN03210 967 SYFTHRTTGASLTnIPLLHISPCQPFFRFRACAVvdsesFFIISVSFDIQVCCRFIDRLGNHFDSpyqpHVFSVTKKG-- 1044
|
1050 1060 1070 1080 1090
....*....|....*....|....*....|....*....|....*....|...
gi 15239799 941 tPHLFIF---------NSVLLE----EVDV-IRFGFSSIHHEITECGVQILTD 979
Cdd:PLN03210 1045 -SHLVIFdccfplnedNAPLAElnydHVDIqFRLTNKNSQLKLKGCGIRLSED 1096
|
|
| TIR |
pfam01582 |
TIR domain; The Toll/interleukin-1 receptor (TIR) homology domain is an intracellular ... |
15-178 |
1.50e-60 |
|
TIR domain; The Toll/interleukin-1 receptor (TIR) homology domain is an intracellular signalling domain found in MyD88, interleukin 1 receptor and the Toll receptor. It contains three highly-conserved regions, and mediates protein-protein interactions between the Toll-like receptors (TLRs) and signal-transduction components. TIR-like motifs are also found in plant proteins thought to be involved in resistance to disease. When activated, TIR domains recruit cytoplasmic adaptor proteins MyD88 and TOLLIP (Toll interacting protein). In turn, these associate with various kinases to set off signalling cascades.
Pssm-ID: 396246 [Multi-domain] Cd Length: 165 Bit Score: 203.75 E-value: 1.50e-60
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239799 15 YDVFPSFRGEDVRGNFLSHLMKEFESKGIVTFKDDL-IERSQTIGLELKEAVRQSKIFVVIFSKNYASSSWCLDELVEIL 93
Cdd:pfam01582 1 YDVFLSFRGSDTREWFVSHLLKELKQKGIKLFIDDRdLEPGEAIAPELLSAIEKSRRSVVVLSPNYASSGWCLDELVKIL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239799 94 KCKEERR--LIPIFYKVNPSDVRNQTGKFGRGFRETCEGKNDETQNKWKAALTEAANIagEDSQSWKNEADFLTKIAKDI 171
Cdd:pfam01582 81 ECALDLGqkVIPIFYEVDPSDVRKQTGSFGKAFKKHKKVLTEEKVLKWRGALNEVANI--WHSKSVSDESKFWKKIAYDI 158
|
....*..
gi 15239799 172 LAKLNGT 178
Cdd:pfam01582 159 SNKLNGT 165
|
|
| TIR |
smart00255 |
Toll - interleukin 1 - resistance; |
14-149 |
1.47e-40 |
|
Toll - interleukin 1 - resistance;
Pssm-ID: 214587 [Multi-domain] Cd Length: 140 Bit Score: 145.93 E-value: 1.47e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239799 14 KYDVFPSFRG-EDVRGNFLSHLMKEFESKGIVTFKDDLIERSQtIGLELKEAVRQSKIFVVIFSKNYASSSWCLDELVEI 92
Cdd:smart00255 1 EYDVFISYSGkEDVRNEFLSHLLEKLRGYGLCVFIDDFEPGGG-DLEEIDEAIEKSRIAIVVLSPNYAESEWCLDELVAA 79
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 15239799 93 LKCKEE---RRLIPIFYKVNPSDVRNQTGKFGRGFRETC-EGKNDETQNKWKAALTEAANI 149
Cdd:smart00255 80 LENALEeggLRVIPIFYEVIPSDVRKQPGKFRKVFKKNYlKWPEDEKEQFWKKALYAVPSK 140
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
625-819 |
2.02e-14 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 76.51 E-value: 2.02e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239799 625 EGTQTLAYLKTIDLSfSNNLVEVPD-LSKAISLETLCLEGCQsLAELPSSVLNLHRLKWLRLTMCeKLEVIPLHI-NLAS 702
Cdd:COG4886 107 EELSNLTNLESLDLS-GNQLTDLPEeLANLTNLKELDLSNNQ-LTDLPEPLGNLTNLKSLDLSNN-QLTDLPEELgNLTN 183
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239799 703 LEVLDMEGClKLKSFPD-IS--KNIERIFMKNTGIEEIPPSISQWSRLESLDISGCLnlkiFSHVP-----KSVVYIYLT 774
Cdd:COG4886 184 LKELDLSNN-QITDLPEpLGnlTNLEELDLSGNQLTDLPEPLANLTNLETLDLSNNQ----LTDLPelgnlTNLEELDLS 258
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 15239799 775 DSGIERLPDCiKDLTWLHYLYVDNCR-KLVSLPELPSSIKILSAIN 819
Cdd:COG4886 259 NNQLTDLPPL-ANLTNLKTLDLSNNQlTDLKLKELELLLGLNSLLL 303
|
|
| AAA |
cd00009 |
The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily ... |
212-330 |
7.68e-03 |
|
The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an ancient group of ATPases belonging to the ASCE (for additional strand, catalytic E) division of the P-loop NTPase fold. The ASCE division also includes ABC, RecA-like, VirD4-like, PilT-like, and SF1/2 helicases. Members of the AAA+ ATPases function as molecular chaperons, ATPase subunits of proteases, helicases, or nucleic-acid stimulated ATPases. The AAA+ proteins contain several distinct features in addition to the conserved alpha-beta-alpha core domain structure and the Walker A and B motifs of the P-loop NTPases.
Pssm-ID: 99707 [Multi-domain] Cd Length: 151 Bit Score: 37.90 E-value: 7.68e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239799 212 IWGPAGIGKTTIARVLHsRFSGDFRFTVFMENVRGNYQRIVDSG-----GEYNLQARLQKEFLPIIFnqkdrkINHLWKI 286
Cdd:cd00009 24 LYGPPGTGKTTLARAIA-NELFRPGAPFLYLNASDLLEGLVVAElfghfLVRLLFELAEKAKPGVLF------IDEIDSL 96
|
90 100 110 120
....*....|....*....|....*....|....*....|....
gi 15239799 287 EERLKKQkvlivlgdvdKVEQLEALANETRWFGPGSRIIVTTKD 330
Cdd:cd00009 97 SRGAQNA----------LLRVLETLNDLRIDRENVRVIGATNRP 130
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| PLN03210 |
PLN03210 |
Resistant to P. syringae 6; Provisional |
13-979 |
0e+00 |
|
Resistant to P. syringae 6; Provisional
Pssm-ID: 215633 [Multi-domain] Cd Length: 1153 Bit Score: 901.16 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239799 13 WKYDVFPSFRGEDVRGNFLSHLMKEFESKGIVTFKDDLIERSQTIGLELKEAVRQSKIFVVIFSKNYASSSWCLDELVEI 92
Cdd:PLN03210 11 WVYDVFPSFSGEDVRITFLSHFLKELDRKLIIAFKDNEIERSQSLDPELKQAIRDSRIAVVVFSKNYASSSWCLNELLEI 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239799 93 LKCKEE--RRLIPIFYKVNPSDVRNQTGKFGRGFRETCEGKNDETQNKWKAALTEAANIAGEDSQSWKNEADFLTKIAKD 170
Cdd:PLN03210 91 VRCKEElgQLVIPVFYGLDPSHVRKQTGDFGEAFEKTCQNKTEDEKIQWKQALTDVANILGYHSQNWPNEAKMIEEIAND 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239799 171 ILAKLNGTPSNDFENIIGIESHMEKMVQLLCLNDDDVRMVGIWGPAGIGKTTIARVLHSRFSGDFRFTVFMENVRGNYQR 250
Cdd:PLN03210 171 VLGKLNLTPSNDFEDFVGIEDHIAKMSSLLHLESEEVRMVGIWGSSGIGKTTIARALFSRLSRQFQSSVFIDRAFISKSM 250
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239799 251 IVDSGG---EYNLQARLQKEFLPIIFNQKDRKINHLWKIEERLKKQKVLIVLGDVDKVEQLEALANETRWFGPGSRIIVT 327
Cdd:PLN03210 251 EIYSSAnpdDYNMKLHLQRAFLSEILDKKDIKIYHLGAMEERLKHRKVLIFIDDLDDQDVLDALAGQTQWFGSGSRIIVI 330
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239799 328 TKDKQILVGHEINHIYEVKLPCRKTALEILCLYAFKQNVAPDDFMDVVVEVAELSGHLPLGLRVLGSHMRGKSKDRWKLE 407
Cdd:PLN03210 331 TKDKHFLRAHGIDHIYEVCLPSNELALEMFCRSAFKKNSPPDGFMELASEVALRAGNLPLGLNVLGSYLRGRDKEDWMDM 410
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239799 408 LGRLTTSLDEKVEKILKISYDDLHIR-DKALFLHIACMFNGENIDLVKQMLVNSDLDVSLGLQLLLDKSLIQINDDrEIV 486
Cdd:PLN03210 411 LPRLRNGLDGKIEKTLRVSYDGLNNKkDKAIFRHIACLFNGEKVNDIKLLLANSDLDVNIGLKNLVDKSLIHVRED-IVE 489
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239799 487 MHSLLLKMGKEVVCQHSSEPGKRQFLFNTKETCNILSNNTGSEAVLGISLDTSEIqNDVFMSERVFEDMRNLKFLRFYNK 566
Cdd:PLN03210 490 MHSLLQEMGKEIVRAQSNEPGEREFLVDAKDICDVLEDNTGTKKVLGITLDIDEI-DELHIHENAFKGMRNLLFLKFYTK 568
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239799 567 KIDENPSLKLHLPRGLNYLPA-VRLLHWDSYPMKYIPSQFRPECLVELRMMHSKVVKLWEGTQTLAYLKTIDLSFSNNLV 645
Cdd:PLN03210 569 KWDQKKEVRWHLPEGFDYLPPkLRLLRWDKYPLRCMPSNFRPENLVKLQMQGSKLEKLWDGVHSLTGLRNIDLRGSKNLK 648
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239799 646 EVPDLSKAISLETLCLEGCQSLAELPSSVLNLHRLKWLRLTMCEKLEVIPLHINLASLEVLDMEGCLKLKSFPDISKNIE 725
Cdd:PLN03210 649 EIPDLSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGINLKSLYRLNLSGCSRLKSFPDISTNIS 728
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239799 726 RIFMKNTGIEEIP----------------PSISQWSR------------------------------------------- 746
Cdd:PLN03210 729 WLDLDETAIEEFPsnlrlenldelilcemKSEKLWERvqpltplmtmlspsltrlflsdipslvelpssiqnlhklehle 808
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239799 747 ------------------LESLDISGCLNLKIFSHVPKSVVYIYLTDSGIERLPDCIKDLTWLHYLYVDNCRKLVSLPEL 808
Cdd:PLN03210 809 iencinletlptginlesLESLDLSGCSRLRTFPDISTNISDLNLSRTGIEEVPWWIEKFSNLSFLDMNGCNNLQRVSLN 888
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239799 809 PSSIKILSAI---NCESLERIS---SSFDCPNA------------KVEFSKSMNFDGEArrVITQQWVYKRACLPGKEVP 870
Cdd:PLN03210 889 ISKLKHLETVdfsDCGALTEASwngSPSEVAMAtdnihsklpstvCINFINCFNLDQEA--LLQQQSIFKQLILSGEEVP 966
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239799 871 LEFSHRARGGSLT-IHLEDENVCSSSLRFKACIL-----LFPSERNNICTVYCRLIGESGRLIAA----HRFGGVVKDfv 940
Cdd:PLN03210 967 SYFTHRTTGASLTnIPLLHISPCQPFFRFRACAVvdsesFFIISVSFDIQVCCRFIDRLGNHFDSpyqpHVFSVTKKG-- 1044
|
1050 1060 1070 1080 1090
....*....|....*....|....*....|....*....|....*....|...
gi 15239799 941 tPHLFIF---------NSVLLE----EVDV-IRFGFSSIHHEITECGVQILTD 979
Cdd:PLN03210 1045 -SHLVIFdccfplnedNAPLAElnydHVDIqFRLTNKNSQLKLKGCGIRLSED 1096
|
|
| TIR |
pfam01582 |
TIR domain; The Toll/interleukin-1 receptor (TIR) homology domain is an intracellular ... |
15-178 |
1.50e-60 |
|
TIR domain; The Toll/interleukin-1 receptor (TIR) homology domain is an intracellular signalling domain found in MyD88, interleukin 1 receptor and the Toll receptor. It contains three highly-conserved regions, and mediates protein-protein interactions between the Toll-like receptors (TLRs) and signal-transduction components. TIR-like motifs are also found in plant proteins thought to be involved in resistance to disease. When activated, TIR domains recruit cytoplasmic adaptor proteins MyD88 and TOLLIP (Toll interacting protein). In turn, these associate with various kinases to set off signalling cascades.
Pssm-ID: 396246 [Multi-domain] Cd Length: 165 Bit Score: 203.75 E-value: 1.50e-60
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239799 15 YDVFPSFRGEDVRGNFLSHLMKEFESKGIVTFKDDL-IERSQTIGLELKEAVRQSKIFVVIFSKNYASSSWCLDELVEIL 93
Cdd:pfam01582 1 YDVFLSFRGSDTREWFVSHLLKELKQKGIKLFIDDRdLEPGEAIAPELLSAIEKSRRSVVVLSPNYASSGWCLDELVKIL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239799 94 KCKEERR--LIPIFYKVNPSDVRNQTGKFGRGFRETCEGKNDETQNKWKAALTEAANIagEDSQSWKNEADFLTKIAKDI 171
Cdd:pfam01582 81 ECALDLGqkVIPIFYEVDPSDVRKQTGSFGKAFKKHKKVLTEEKVLKWRGALNEVANI--WHSKSVSDESKFWKKIAYDI 158
|
....*..
gi 15239799 172 LAKLNGT 178
Cdd:pfam01582 159 SNKLNGT 165
|
|
| TIR |
smart00255 |
Toll - interleukin 1 - resistance; |
14-149 |
1.47e-40 |
|
Toll - interleukin 1 - resistance;
Pssm-ID: 214587 [Multi-domain] Cd Length: 140 Bit Score: 145.93 E-value: 1.47e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239799 14 KYDVFPSFRG-EDVRGNFLSHLMKEFESKGIVTFKDDLIERSQtIGLELKEAVRQSKIFVVIFSKNYASSSWCLDELVEI 92
Cdd:smart00255 1 EYDVFISYSGkEDVRNEFLSHLLEKLRGYGLCVFIDDFEPGGG-DLEEIDEAIEKSRIAIVVLSPNYAESEWCLDELVAA 79
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 15239799 93 LKCKEE---RRLIPIFYKVNPSDVRNQTGKFGRGFRETC-EGKNDETQNKWKAALTEAANI 149
Cdd:smart00255 80 LENALEeggLRVIPIFYEVIPSDVRKQPGKFRKVFKKNYlKWPEDEKEQFWKKALYAVPSK 140
|
|
| NB-ARC |
pfam00931 |
NB-ARC domain; |
189-429 |
3.66e-18 |
|
NB-ARC domain;
Pssm-ID: 395745 [Multi-domain] Cd Length: 245 Bit Score: 85.12 E-value: 3.66e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239799 189 IESHMEKMVQLLcLNDDDVRMVGIWGPAGIGKTTIARVLHSRFSgdfrftvfmeNVRGNYQRI---VDSG--GEYNLQAR 263
Cdd:pfam00931 1 REDMVEKVIGKL-SEKDEPGIVGIHGMGGVGKTTLAAQIFNDFD----------EVEGHFDSVawvVVSKtfTISTLQQT 69
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239799 264 LQKEFLP-----IIFNQKDRKInhlwKIEERLKKQKVLIVLGDVDKVEQLEALANETRWFGPGSRIIVTTKDKQILVGHE 338
Cdd:pfam00931 70 ILQNLGLseddwDNKEEGELAR----KIRRALLTKRFLLVLDDVWDEEDWDKIGIPLPDRENGCRVLLTTRSEEVAGRVG 145
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239799 339 INH-IYEVKLPCRKTALEILCLYAFKQNVAPDDFM-DVVVEVAELSGHLPLGLRVLGSHMRGKS-KDRWKLELGRLTTSL 415
Cdd:pfam00931 146 GPSdPHEVELLEPDEAWELFENKVFPKTLGECELLeDVAKEIVEKCRGLPLALKVLGGLLSCKKtVEEWKHVYDVLQSEL 225
|
250 260
....*....|....*....|
gi 15239799 416 D------EKVEKILKISYDD 429
Cdd:pfam00931 226 KsnsyslNSVRSILQLSYEN 245
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
625-819 |
2.02e-14 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 76.51 E-value: 2.02e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239799 625 EGTQTLAYLKTIDLSfSNNLVEVPD-LSKAISLETLCLEGCQsLAELPSSVLNLHRLKWLRLTMCeKLEVIPLHI-NLAS 702
Cdd:COG4886 107 EELSNLTNLESLDLS-GNQLTDLPEeLANLTNLKELDLSNNQ-LTDLPEPLGNLTNLKSLDLSNN-QLTDLPEELgNLTN 183
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239799 703 LEVLDMEGClKLKSFPD-IS--KNIERIFMKNTGIEEIPPSISQWSRLESLDISGCLnlkiFSHVP-----KSVVYIYLT 774
Cdd:COG4886 184 LKELDLSNN-QITDLPEpLGnlTNLEELDLSGNQLTDLPEPLANLTNLETLDLSNNQ----LTDLPelgnlTNLEELDLS 258
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 15239799 775 DSGIERLPDCiKDLTWLHYLYVDNCR-KLVSLPELPSSIKILSAIN 819
Cdd:COG4886 259 NNQLTDLPPL-ANLTNLKTLDLSNNQlTDLKLKELELLLGLNSLLL 303
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
623-827 |
1.68e-12 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 70.73 E-value: 1.68e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239799 623 LWEGTQTLAYLKTIDLSFSNNLVEVPDLSKAISLETLCLEGCQSLAELPSSVLNLHRLKWLRLTMCEKLEviplhiNLAS 702
Cdd:COG4886 41 SLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLLLLSLLLLGLTDLGDLTNLTELDLSGNEELS------NLTN 114
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239799 703 LEVLDMEGClKLKSFPD-IS--KNIERIFMKNTGIEEIPPSISQWSRLESLDISGClnlKIfSHVPKSV------VYIYL 773
Cdd:COG4886 115 LESLDLSGN-QLTDLPEeLAnlTNLKELDLSNNQLTDLPEPLGNLTNLKSLDLSNN---QL-TDLPEELgnltnlKELDL 189
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....
gi 15239799 774 TDSGIERLPDCIKDLTWLHYLYVDNCRklvsLPELPSSIKilsaiNCESLERIS 827
Cdd:COG4886 190 SNNQITDLPEPLGNLTNLEELDLSGNQ----LTDLPEPLA-----NLTNLETLD 234
|
|
| TIR_2 |
pfam13676 |
TIR domain; This is a family of Toll-like receptors. |
17-112 |
4.33e-10 |
|
TIR domain; This is a family of Toll-like receptors.
Pssm-ID: 463954 [Multi-domain] Cd Length: 118 Bit Score: 58.10 E-value: 4.33e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239799 17 VFPSFRGEDVrgNFLSHLMKEFESKGI-VTFKDDLIERSQTIGLELKEAVRQSKIFVVIFSKNYASSSWCLDELVEILKC 95
Cdd:pfam13676 1 VFISYAGEDR--AWAEWLADALEAAGYrVWLDRWDIRPGDDWVEEIEEAIENSDRVLVVLSPNYLESPWCRAEWEAALAD 78
|
90
....*....|....*...
gi 15239799 96 KE-ERRLIPIFYKVNPSD 112
Cdd:pfam13676 79 PEgRKRLIPVRLECDLEL 96
|
|
| PLN03194 |
PLN03194 |
putative disease resistance protein; Provisional |
16-174 |
6.42e-09 |
|
putative disease resistance protein; Provisional
Pssm-ID: 215626 [Multi-domain] Cd Length: 187 Bit Score: 56.75 E-value: 6.42e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239799 16 DVFPSFRGEDVRGNFLSHLMKEFESKGIVTFKDDlieRSQTIGLEL----KEAVRQSKIFVVIFSKNYASSSWCLDELVE 91
Cdd:PLN03194 28 DVFINHRGIDTKRTIATLLYDHLSRLNLRPFLDN---KNMKPGDKLfdkiNSAIRNCKVGVAVFSPRYCESYFCLHELAL 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239799 92 ILKCKEerRLIPIFYKVNPSDVRNQTgkfgrgfRETCEGknDETQnKWKAALTEAANIAGEDSQSWK-NEADFLTkIAKD 170
Cdd:PLN03194 105 IMESKK--RVIPIFCDVKPSQLRVVD-------NGTCPD--EEIR-RFNWALEEAKYTVGLTFDSLKgNWSEVVT-MASD 171
|
....
gi 15239799 171 ILAK 174
Cdd:PLN03194 172 AVIK 175
|
|
| COG4916 |
COG4916 |
Uncharacterized conserved protein [Function unknown]; |
15-106 |
3.58e-08 |
|
Uncharacterized conserved protein [Function unknown];
Pssm-ID: 443944 [Multi-domain] Cd Length: 236 Bit Score: 55.51 E-value: 3.58e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239799 15 YDVFPSFRGEDvRgNFLSHLMKEFESKGIVTFKDDLiERSQTIGLELKEAV-----RQSKIFVVIFSKNYASSSWCLDEL 89
Cdd:COG4916 1 YDVALSFAGED-R-EFVERVAEALKARGIKVFYDEN-EEAELWGKDLDEYLqdiyrSESRFVVVFLSKDYVEKKWTGLER 77
|
90 100
....*....|....*....|
gi 15239799 90 ---VEILKCKEERRLIPIFY 106
Cdd:COG4916 78 raaLARAMQRKKEYILPIRL 97
|
|
| C-JID |
pfam20160 |
C-JID domain; C-terminal jelly roll/Ig-like domain (C-JID) was defined in cryogenic electron ... |
864-977 |
3.89e-06 |
|
C-JID domain; C-terminal jelly roll/Ig-like domain (C-JID) was defined in cryogenic electron microscopy (cryoEM) structures of plant intracellular immune receptors containing Toll/interleukin-1 receptor (TIR, PF01582), nucleotide-binding (NB-ARC, PF00931) and leucine-rich repeat (LRR) domains (TIR-NLRs). Structurally, the C-JID core is represented by a beta-sandwich made up of 8 to 9 beta-strands. C-JID matches the so-called post LRR domain originally detected via a set of MEME motifs. The domain showed a strong distribution bias towards TIR-NLRs of dicotyledonous plant species despite broader taxonomic distribution of TIR-NLR in plant groups. Structure-function analyses of cryoEM structures suggest that C-JID domains play a role in substrate-recognition, such as binding to effector proteins from pathogens, and thus are involved in the initiation of signaling by TIR-NLR receptors. Presence of C-JID (or post-LRR) and its importance for the function of Arabidopsis TIR-NLR RPS4 that partners with RRS1 for effector recognition suggest that C-JID has additional functions.
Pssm-ID: 466313 Cd Length: 108 Bit Score: 46.67 E-value: 3.89e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239799 864 LPGKEVPLEFSHRARGGSLTIHLeDENVCSS-SLRFKACIllfpsernnICTVYCRLIGESGRLIAAHRFGGVVKDFVTP 942
Cdd:pfam20160 1 LPGSQIPEWFNHQSTGSSISIKL-PENWYNDnFLGFAVCA---------VGSLIPSLHNFLGYIHFFLIPLVSLWDTSKA 70
|
90 100 110
....*....|....*....|....*....|....*
gi 15239799 943 HLFIFNSVLLEEVDvirFGFSSIHHEITECGVQIL 977
Cdd:pfam20160 71 NGKTPNDYGRIEAS---FEFPSDLHEIKQCGVRLI 102
|
|
| LRR_3 |
pfam07725 |
Leucine Rich Repeat; This Pfam entry includes some LRRs that fail to be detected by the ... |
609-628 |
9.93e-05 |
|
Leucine Rich Repeat; This Pfam entry includes some LRRs that fail to be detected by the pfam00560 model.
Pssm-ID: 429621 [Multi-domain] Cd Length: 20 Bit Score: 40.01 E-value: 9.93e-05
|
| NACHT |
pfam05729 |
NACHT domain; This NTPase domain is found in apoptosis proteins as well as those involved in ... |
208-329 |
4.22e-03 |
|
NACHT domain; This NTPase domain is found in apoptosis proteins as well as those involved in MHC transcription activation. This family is closely related to pfam00931.
Pssm-ID: 428606 [Multi-domain] Cd Length: 166 Bit Score: 39.21 E-value: 4.22e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239799 208 RMVGIWGPAGIGKTTIARVLHS-----RFSGDFRFtVFMENVRgnyqRIVDSGGEYNLQARLQKEFLPIIFNQkDRKINH 282
Cdd:pfam05729 1 RTVILQGEAGSGKTTLLQKLALlwaqgKLPQGFDF-VFFLPCR----ELSRSGNARSLADLLFSQWPEPAAPV-SEVWAV 74
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*....
gi 15239799 283 LWKIEERlkkqkVLIVLGDVDKVE----QLEALANETRWFG--------PGSRIIVTTK 329
Cdd:pfam05729 75 ILELPER-----LLLILDGLDELVsdlgQLDGPCPVLTLLSsllrkkllPGASLLLTVR 128
|
|
| AAA |
cd00009 |
The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily ... |
212-330 |
7.68e-03 |
|
The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an ancient group of ATPases belonging to the ASCE (for additional strand, catalytic E) division of the P-loop NTPase fold. The ASCE division also includes ABC, RecA-like, VirD4-like, PilT-like, and SF1/2 helicases. Members of the AAA+ ATPases function as molecular chaperons, ATPase subunits of proteases, helicases, or nucleic-acid stimulated ATPases. The AAA+ proteins contain several distinct features in addition to the conserved alpha-beta-alpha core domain structure and the Walker A and B motifs of the P-loop NTPases.
Pssm-ID: 99707 [Multi-domain] Cd Length: 151 Bit Score: 37.90 E-value: 7.68e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15239799 212 IWGPAGIGKTTIARVLHsRFSGDFRFTVFMENVRGNYQRIVDSG-----GEYNLQARLQKEFLPIIFnqkdrkINHLWKI 286
Cdd:cd00009 24 LYGPPGTGKTTLARAIA-NELFRPGAPFLYLNASDLLEGLVVAElfghfLVRLLFELAEKAKPGVLF------IDEIDSL 96
|
90 100 110 120
....*....|....*....|....*....|....*....|....
gi 15239799 287 EERLKKQkvlivlgdvdKVEQLEALANETRWFGPGSRIIVTTKD 330
Cdd:cd00009 97 SRGAQNA----------LLRVLETLNDLRIDRENVRVIGATNRP 130
|
|
| |
