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Conserved domains on  [gi|79530535|ref|NP_199426|]
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hypothetical protein (DUF295) [Arabidopsis thaliana]

Protein Classification

DUF295 domain-containing protein( domain architecture ID 10507267)

DUF295 domain-containing protein similar to Arabidopsis thaliana F-box proteins, KIB2 and KIB4, that are components of SCF(ASK-cullin-F-box) E3 ubiquitin ligase complexes, which may mediate the ubiquitination and subsequent proteasomal degradation of target proteins

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF295 pfam03478
Protein of unknown function (DUF295); This domain is found in plant proteins of unknown ...
 214-257 8.94e-13

Protein of unknown function (DUF295); This domain is found in plant proteins of unknown function. It can be found in association with F-box domain pfam00646.


:

Pssm-ID: 460939 [Multi-domain]  Cd Length: 57  Bit Score: 61.84  E-value: 8.94e-13
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 79530535   214 TENIGDLCIFLGHGEALCIPASTIPGLKPNCIYFA-----------GHNYGVFDI 257
Cdd:pfam03478   3 VKSLGDRALFLGRNCSLSVSASDFPGLKGNCIYFLtddddevykdeGRDIGVYDL 57
 
Name Accession Description Interval E-value
DUF295 pfam03478
Protein of unknown function (DUF295); This domain is found in plant proteins of unknown ...
 214-257 8.94e-13

Protein of unknown function (DUF295); This domain is found in plant proteins of unknown function. It can be found in association with F-box domain pfam00646.


Pssm-ID: 460939 [Multi-domain]  Cd Length: 57  Bit Score: 61.84  E-value: 8.94e-13
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 79530535   214 TENIGDLCIFLGHGEALCIPASTIPGLKPNCIYFA-----------GHNYGVFDI 257
Cdd:pfam03478   3 VKSLGDRALFLGRNCSLSVSASDFPGLKGNCIYFLtddddevykdeGRDIGVYDL 57
 
Name Accession Description Interval E-value
DUF295 pfam03478
Protein of unknown function (DUF295); This domain is found in plant proteins of unknown ...
 214-257 8.94e-13

Protein of unknown function (DUF295); This domain is found in plant proteins of unknown function. It can be found in association with F-box domain pfam00646.


Pssm-ID: 460939 [Multi-domain]  Cd Length: 57  Bit Score: 61.84  E-value: 8.94e-13
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 79530535   214 TENIGDLCIFLGHGEALCIPASTIPGLKPNCIYFA-----------GHNYGVFDI 257
Cdd:pfam03478   3 VKSLGDRALFLGRNCSLSVSASDFPGLKGNCIYFLtddddevykdeGRDIGVYDL 57
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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