F-box family protein [Arabidopsis thaliana]
Protein Classification
F-box protein( domain architecture ID 10459082)
F-box protein containing a DUF295 domain, may function as the substrate-recognition component of a SCF(Skp1-cullin-F-box) E3 ubiquitin ligase complex that mediates the ubiquitination and subsequent proteasomal degradation of target proteins
List of domain hits
| Name | Accession | Description | Interval | E-value | ||
| DUF295 | pfam03478 | Protein of unknown function (DUF295); This domain is found in plant proteins of unknown ... |
320-378 | 1.19e-08 | ||
Protein of unknown function (DUF295); This domain is found in plant proteins of unknown function. It can be found in association with F-box domain pfam00646. : Pssm-ID: 460939 [Multi-domain] Cd Length: 57 Bit Score: 51.06 E-value: 1.19e-08
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| F-box | pfam00646 | F-box domain; This domain is approximately 50 amino acids long, and is usually found in the ... |
22-59 | 3.34e-03 | ||
F-box domain; This domain is approximately 50 amino acids long, and is usually found in the N-terminal half of a variety of proteins. Two motifs that are commonly found associated with the F-box domain are the leucine rich repeats (LRRs; pfam00560 and pfam07723) and the WD repeat (pfam00400). The F-box domain has a role in mediating protein-protein interactions in a variety of contexts, such as polyubiquitination, transcription elongation, centromere binding and translational repression. : Pssm-ID: 425796 Cd Length: 43 Bit Score: 35.21 E-value: 3.34e-03
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| Name | Accession | Description | Interval | E-value | ||
| DUF295 | pfam03478 | Protein of unknown function (DUF295); This domain is found in plant proteins of unknown ... |
320-378 | 1.19e-08 | ||
Protein of unknown function (DUF295); This domain is found in plant proteins of unknown function. It can be found in association with F-box domain pfam00646. Pssm-ID: 460939 [Multi-domain] Cd Length: 57 Bit Score: 51.06 E-value: 1.19e-08
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| F-box | pfam00646 | F-box domain; This domain is approximately 50 amino acids long, and is usually found in the ... |
22-59 | 3.34e-03 | ||
F-box domain; This domain is approximately 50 amino acids long, and is usually found in the N-terminal half of a variety of proteins. Two motifs that are commonly found associated with the F-box domain are the leucine rich repeats (LRRs; pfam00560 and pfam07723) and the WD repeat (pfam00400). The F-box domain has a role in mediating protein-protein interactions in a variety of contexts, such as polyubiquitination, transcription elongation, centromere binding and translational repression. Pssm-ID: 425796 Cd Length: 43 Bit Score: 35.21 E-value: 3.34e-03
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| Name | Accession | Description | Interval | E-value | ||
| DUF295 | pfam03478 | Protein of unknown function (DUF295); This domain is found in plant proteins of unknown ... |
320-378 | 1.19e-08 | ||
Protein of unknown function (DUF295); This domain is found in plant proteins of unknown function. It can be found in association with F-box domain pfam00646. Pssm-ID: 460939 [Multi-domain] Cd Length: 57 Bit Score: 51.06 E-value: 1.19e-08
|
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| F-box | pfam00646 | F-box domain; This domain is approximately 50 amino acids long, and is usually found in the ... |
22-59 | 3.34e-03 | ||
F-box domain; This domain is approximately 50 amino acids long, and is usually found in the N-terminal half of a variety of proteins. Two motifs that are commonly found associated with the F-box domain are the leucine rich repeats (LRRs; pfam00560 and pfam07723) and the WD repeat (pfam00400). The F-box domain has a role in mediating protein-protein interactions in a variety of contexts, such as polyubiquitination, transcription elongation, centromere binding and translational repression. Pssm-ID: 425796 Cd Length: 43 Bit Score: 35.21 E-value: 3.34e-03
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| Blast search parameters | ||||
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