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Conserved domains on  [gi|15242041|ref|NP_197570|]
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senescence-associated family protein, putative (DUF581) [Arabidopsis thaliana]

Protein Classification

FCS-Like zinc finger protein( domain architecture ID 10518910)

FCS-Like zinc finger protein (FLZ) may act as an adapter to facilitate the interaction of SnRK1 complex with effector proteins, conferring tissue- and stimulus-type specific differences in the SnRK1 regulation pathway

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
zf-FLZ pfam04570
zinc-finger of the FCS-type, C2-C2; zf-FLZ is a FCS-like zinc-finger domain found in higher ...
 171-222 1.43e-21

zinc-finger of the FCS-type, C2-C2; zf-FLZ is a FCS-like zinc-finger domain found in higher plants. It is bryophitic in origin. It carries a zf-FCS-like C2-C2 zinc finger, consisting of a consensus cysteine-signature sequence with conserved phenyl alanine and serine residue associated with a third cysteine. It acts as a protein-protein interaction module.


:

Pssm-ID: 428015  Cd Length: 53  Bit Score: 84.56  E-value: 1.43e-21
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|...
gi 15242041   171 PENSPEFQGLGFLNSCYLCRKKL-HGQDIFIYRGEKAFCSTECRSSHIANDER 222
Cdd:pfam04570   1 SDDSAPVPTAHFLSACYLCKKKLgPGKDIYMYRGDKAFCSEECRQQQMLMDEE 53
 
Name Accession Description Interval E-value
zf-FLZ pfam04570
zinc-finger of the FCS-type, C2-C2; zf-FLZ is a FCS-like zinc-finger domain found in higher ...
 171-222 1.43e-21

zinc-finger of the FCS-type, C2-C2; zf-FLZ is a FCS-like zinc-finger domain found in higher plants. It is bryophitic in origin. It carries a zf-FCS-like C2-C2 zinc finger, consisting of a consensus cysteine-signature sequence with conserved phenyl alanine and serine residue associated with a third cysteine. It acts as a protein-protein interaction module.


Pssm-ID: 428015  Cd Length: 53  Bit Score: 84.56  E-value: 1.43e-21
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|...
gi 15242041   171 PENSPEFQGLGFLNSCYLCRKKL-HGQDIFIYRGEKAFCSTECRSSHIANDER 222
Cdd:pfam04570   1 SDDSAPVPTAHFLSACYLCKKKLgPGKDIYMYRGDKAFCSEECRQQQMLMDEE 53
 
Name Accession Description Interval E-value
zf-FLZ pfam04570
zinc-finger of the FCS-type, C2-C2; zf-FLZ is a FCS-like zinc-finger domain found in higher ...
 171-222 1.43e-21

zinc-finger of the FCS-type, C2-C2; zf-FLZ is a FCS-like zinc-finger domain found in higher plants. It is bryophitic in origin. It carries a zf-FCS-like C2-C2 zinc finger, consisting of a consensus cysteine-signature sequence with conserved phenyl alanine and serine residue associated with a third cysteine. It acts as a protein-protein interaction module.


Pssm-ID: 428015  Cd Length: 53  Bit Score: 84.56  E-value: 1.43e-21
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|...
gi 15242041   171 PENSPEFQGLGFLNSCYLCRKKL-HGQDIFIYRGEKAFCSTECRSSHIANDER 222
Cdd:pfam04570   1 SDDSAPVPTAHFLSACYLCKKKLgPGKDIYMYRGDKAFCSEECRQQQMLMDEE 53
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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