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Conserved domains on  [gi|240256300|ref|NP_197217|]
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Cystatin/monellin superfamily protein [Arabidopsis thaliana]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Atha_cystat_rel super family cl11766
Arabidopsis thaliana cystatin-related protein; This model represents a family similar in ...
 108-199 1.68e-27

Arabidopsis thaliana cystatin-related protein; This model represents a family similar in sequence and probably homologous to a large family of cysteine proteinase inhibitors, or cystatins, as described by pfam00031. Cystatins may help plants resist attack by insects.


The actual alignment was detected with superfamily member TIGR01638:

Pssm-ID: 130699  Cd Length: 92  Bit Score: 99.89  E-value: 1.68e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240256300  108 DEIAYR-NMTARELMTNLANLCVKKLNDEKGQTVELVEIVRVIDSGGFRWYSYITFMAREYPNGPLVEYQAKVMNYAGne 186
Cdd:TIGR01638   1 DWEAIRpIETNRDLLERLSYVASKKYNDTKFLNLELVEVVRANYRGGAKSKSYITFEARDKPDGPLGEYQQAAVVYLH-- 78

                          90
                  ....*....|...
gi 240256300  187 kpPFPILCRPSPK 199
Cdd:TIGR01638  79 --RHPIVCRPTPK 89
 
Name Accession Description Interval E-value
Atha_cystat_rel TIGR01638
Arabidopsis thaliana cystatin-related protein; This model represents a family similar in ...
 108-199 1.68e-27

Arabidopsis thaliana cystatin-related protein; This model represents a family similar in sequence and probably homologous to a large family of cysteine proteinase inhibitors, or cystatins, as described by pfam00031. Cystatins may help plants resist attack by insects.


Pssm-ID: 130699  Cd Length: 92  Bit Score: 99.89  E-value: 1.68e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240256300  108 DEIAYR-NMTARELMTNLANLCVKKLNDEKGQTVELVEIVRVIDSGGFRWYSYITFMAREYPNGPLVEYQAKVMNYAGne 186
Cdd:TIGR01638   1 DWEAIRpIETNRDLLERLSYVASKKYNDTKFLNLELVEVVRANYRGGAKSKSYITFEARDKPDGPLGEYQQAAVVYLH-- 78

                          90
                  ....*....|...
gi 240256300  187 kpPFPILCRPSPK 199
Cdd:TIGR01638  79 --RHPIVCRPTPK 89
 
Name Accession Description Interval E-value
Atha_cystat_rel TIGR01638
Arabidopsis thaliana cystatin-related protein; This model represents a family similar in ...
 108-199 1.68e-27

Arabidopsis thaliana cystatin-related protein; This model represents a family similar in sequence and probably homologous to a large family of cysteine proteinase inhibitors, or cystatins, as described by pfam00031. Cystatins may help plants resist attack by insects.


Pssm-ID: 130699  Cd Length: 92  Bit Score: 99.89  E-value: 1.68e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240256300  108 DEIAYR-NMTARELMTNLANLCVKKLNDEKGQTVELVEIVRVIDSGGFRWYSYITFMAREYPNGPLVEYQAKVMNYAGne 186
Cdd:TIGR01638   1 DWEAIRpIETNRDLLERLSYVASKKYNDTKFLNLELVEVVRANYRGGAKSKSYITFEARDKPDGPLGEYQQAAVVYLH-- 78

                          90
                  ....*....|...
gi 240256300  187 kpPFPILCRPSPK 199
Cdd:TIGR01638  79 --RHPIVCRPTPK 89
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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