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Conserved domains on  [gi|15237245|ref|NP_197105|]
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3-oxo-5-alpha-steroid 4-dehydrogenase family protein [Arabidopsis thaliana]

Protein Classification

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
Steroid_dh super family cl47745
3-oxo-5-alpha-steroid 4-dehydrogenase; This family consists of 3-oxo-5-alpha-steroid ...
157-268 6.70e-24

3-oxo-5-alpha-steroid 4-dehydrogenase; This family consists of 3-oxo-5-alpha-steroid 4-dehydrogenases, EC:1.3.99.5 Also known as Steroid 5-alpha-reductase, the reaction catalyzed by this enzyme is: 3-oxo-5-alpha-steroid + acceptor <=> 3-oxo-delta(4)-steroid + reduced acceptor. The Steroid 5-alpha-reductase enzyme is responsible for the formation of dihydrotestosterone, this hormone promotes the differentiation of male external genitalia and the prostate during fetal development. In humans mutations in this enzyme can cause a form of male pseudohermaphorditism in which the external genitalia and prostate fail to develop normally. A related enzyme is also found in plants is DET2, a steroid reductase from Arabidopsis. Mutations in this enzyme cause defects in light-regulated development.


The actual alignment was detected with superfamily member pfam02544:

Pssm-ID: 460585 [Multi-domain]  Cd Length: 150  Bit Score: 94.01  E-value: 6.70e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237245   157 DMKLAGVVMFVVGIVGNLYHHVLLAKLRKeDGKKEYKIPKGGLFDIIICPHYLFEILVFWSFFLISQTIYSFSFAMGTML 236
Cdd:pfam02544  40 PRFLIGIGLFVTGMLINIKSDIILRTLRK-PGNTGYKIPRGGLFELVSCPNYFGEIMEWIGYALATWSLPALAFAFFTVC 118
                          90       100       110
                  ....*....|....*....|....*....|..
gi 15237245   237 YLIGRSYATRTWYLSKFDDFPKHIKALIPFVF 268
Cdd:pfam02544 119 NLTPRAKAHHKWYLKKFEKYPKSRKALIPFVF 150
PLN02560 super family cl28409
enoyl-CoA reductase
68-231 4.89e-22

enoyl-CoA reductase


The actual alignment was detected with superfamily member PLN02560:

Pssm-ID: 178174 [Multi-domain]  Cd Length: 308  Bit Score: 92.86  E-value: 4.89e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237245   68 GMLLLYTP-AFLAAASSFFVVPSDDLRFLLLKSALA---LHFFKRVFEVLFIHKYS-GGMAIDSALTISSSYFSSTALML 142
Cdd:PLN02560  99 GPLLIYPLfYFFPQVYKYFGYPARRVIHPVQTYAMYywcFHYAKRILETFFVHRFShATSPLFNVFRNCAYYWTFGAYIA 178
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237245  143 YSQNLTLgLTEPSFDMKLAGVVMFVVGIVGNLYHHVLLAKLRKEDGKKEYKIPKGGLFDIIICPHYLFEILVFWSFFLIS 222
Cdd:PLN02560 179 YFVNHPL-YTPVSETQMKVGFGFGLVCQLANFYCHIILRNLRKPDGKGGYQIPRGFLFNYVTCANYTTEIYQWLGFNIAT 257

                 ....*....
gi 15237245  223 QTIYSFSFA 231
Cdd:PLN02560 258 QTVAGYLFL 266
 
Name Accession Description Interval E-value
Steroid_dh pfam02544
3-oxo-5-alpha-steroid 4-dehydrogenase; This family consists of 3-oxo-5-alpha-steroid ...
157-268 6.70e-24

3-oxo-5-alpha-steroid 4-dehydrogenase; This family consists of 3-oxo-5-alpha-steroid 4-dehydrogenases, EC:1.3.99.5 Also known as Steroid 5-alpha-reductase, the reaction catalyzed by this enzyme is: 3-oxo-5-alpha-steroid + acceptor <=> 3-oxo-delta(4)-steroid + reduced acceptor. The Steroid 5-alpha-reductase enzyme is responsible for the formation of dihydrotestosterone, this hormone promotes the differentiation of male external genitalia and the prostate during fetal development. In humans mutations in this enzyme can cause a form of male pseudohermaphorditism in which the external genitalia and prostate fail to develop normally. A related enzyme is also found in plants is DET2, a steroid reductase from Arabidopsis. Mutations in this enzyme cause defects in light-regulated development.


Pssm-ID: 460585 [Multi-domain]  Cd Length: 150  Bit Score: 94.01  E-value: 6.70e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237245   157 DMKLAGVVMFVVGIVGNLYHHVLLAKLRKeDGKKEYKIPKGGLFDIIICPHYLFEILVFWSFFLISQTIYSFSFAMGTML 236
Cdd:pfam02544  40 PRFLIGIGLFVTGMLINIKSDIILRTLRK-PGNTGYKIPRGGLFELVSCPNYFGEIMEWIGYALATWSLPALAFAFFTVC 118
                          90       100       110
                  ....*....|....*....|....*....|..
gi 15237245   237 YLIGRSYATRTWYLSKFDDFPKHIKALIPFVF 268
Cdd:pfam02544 119 NLTPRAKAHHKWYLKKFEKYPKSRKALIPFVF 150
PLN02560 PLN02560
enoyl-CoA reductase
68-231 4.89e-22

enoyl-CoA reductase


Pssm-ID: 178174 [Multi-domain]  Cd Length: 308  Bit Score: 92.86  E-value: 4.89e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237245   68 GMLLLYTP-AFLAAASSFFVVPSDDLRFLLLKSALA---LHFFKRVFEVLFIHKYS-GGMAIDSALTISSSYFSSTALML 142
Cdd:PLN02560  99 GPLLIYPLfYFFPQVYKYFGYPARRVIHPVQTYAMYywcFHYAKRILETFFVHRFShATSPLFNVFRNCAYYWTFGAYIA 178
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237245  143 YSQNLTLgLTEPSFDMKLAGVVMFVVGIVGNLYHHVLLAKLRKEDGKKEYKIPKGGLFDIIICPHYLFEILVFWSFFLIS 222
Cdd:PLN02560 179 YFVNHPL-YTPVSETQMKVGFGFGLVCQLANFYCHIILRNLRKPDGKGGYQIPRGFLFNYVTCANYTTEIYQWLGFNIAT 257

                 ....*....
gi 15237245  223 QTIYSFSFA 231
Cdd:PLN02560 258 QTVAGYLFL 266
PLN02392 PLN02392
probable steroid reductase DET2
162-268 3.43e-16

probable steroid reductase DET2


Pssm-ID: 178015  Cd Length: 260  Bit Score: 76.00  E-value: 3.43e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237245  162 GVVMFVVGIVGNLYHHVLLAKLRKEDGKkeYKIPKGGLFDIIICPHYLFEILVFWSFFLISQTIYSFSFAMGTMLYLIGR 241
Cdd:PLN02392 155 GLVVFLWGMRINVWSDRVLVGLKREGGG--YKVPRGGWFELVSCPNYFGEIVEWLGWAVMTWSWAGFGFFLYTCSNLVPR 232
                         90       100
                 ....*....|....*....|....*...
gi 15237245  242 SYATRTWYLSKF-DDFPKHIKALIPFVF 268
Cdd:PLN02392 233 ACANHKWYLEKFgEDYPKGRKAVIPFLY 260
 
Name Accession Description Interval E-value
Steroid_dh pfam02544
3-oxo-5-alpha-steroid 4-dehydrogenase; This family consists of 3-oxo-5-alpha-steroid ...
157-268 6.70e-24

3-oxo-5-alpha-steroid 4-dehydrogenase; This family consists of 3-oxo-5-alpha-steroid 4-dehydrogenases, EC:1.3.99.5 Also known as Steroid 5-alpha-reductase, the reaction catalyzed by this enzyme is: 3-oxo-5-alpha-steroid + acceptor <=> 3-oxo-delta(4)-steroid + reduced acceptor. The Steroid 5-alpha-reductase enzyme is responsible for the formation of dihydrotestosterone, this hormone promotes the differentiation of male external genitalia and the prostate during fetal development. In humans mutations in this enzyme can cause a form of male pseudohermaphorditism in which the external genitalia and prostate fail to develop normally. A related enzyme is also found in plants is DET2, a steroid reductase from Arabidopsis. Mutations in this enzyme cause defects in light-regulated development.


Pssm-ID: 460585 [Multi-domain]  Cd Length: 150  Bit Score: 94.01  E-value: 6.70e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237245   157 DMKLAGVVMFVVGIVGNLYHHVLLAKLRKeDGKKEYKIPKGGLFDIIICPHYLFEILVFWSFFLISQTIYSFSFAMGTML 236
Cdd:pfam02544  40 PRFLIGIGLFVTGMLINIKSDIILRTLRK-PGNTGYKIPRGGLFELVSCPNYFGEIMEWIGYALATWSLPALAFAFFTVC 118
                          90       100       110
                  ....*....|....*....|....*....|..
gi 15237245   237 YLIGRSYATRTWYLSKFDDFPKHIKALIPFVF 268
Cdd:pfam02544 119 NLTPRAKAHHKWYLKKFEKYPKSRKALIPFVF 150
PLN02560 PLN02560
enoyl-CoA reductase
68-231 4.89e-22

enoyl-CoA reductase


Pssm-ID: 178174 [Multi-domain]  Cd Length: 308  Bit Score: 92.86  E-value: 4.89e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237245   68 GMLLLYTP-AFLAAASSFFVVPSDDLRFLLLKSALA---LHFFKRVFEVLFIHKYS-GGMAIDSALTISSSYFSSTALML 142
Cdd:PLN02560  99 GPLLIYPLfYFFPQVYKYFGYPARRVIHPVQTYAMYywcFHYAKRILETFFVHRFShATSPLFNVFRNCAYYWTFGAYIA 178
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237245  143 YSQNLTLgLTEPSFDMKLAGVVMFVVGIVGNLYHHVLLAKLRKEDGKKEYKIPKGGLFDIIICPHYLFEILVFWSFFLIS 222
Cdd:PLN02560 179 YFVNHPL-YTPVSETQMKVGFGFGLVCQLANFYCHIILRNLRKPDGKGGYQIPRGFLFNYVTCANYTTEIYQWLGFNIAT 257

                 ....*....
gi 15237245  223 QTIYSFSFA 231
Cdd:PLN02560 258 QTVAGYLFL 266
PLN02392 PLN02392
probable steroid reductase DET2
162-268 3.43e-16

probable steroid reductase DET2


Pssm-ID: 178015  Cd Length: 260  Bit Score: 76.00  E-value: 3.43e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237245  162 GVVMFVVGIVGNLYHHVLLAKLRKEDGKkeYKIPKGGLFDIIICPHYLFEILVFWSFFLISQTIYSFSFAMGTMLYLIGR 241
Cdd:PLN02392 155 GLVVFLWGMRINVWSDRVLVGLKREGGG--YKVPRGGWFELVSCPNYFGEIVEWLGWAVMTWSWAGFGFFLYTCSNLVPR 232
                         90       100
                 ....*....|....*....|....*...
gi 15237245  242 SYATRTWYLSKF-DDFPKHIKALIPFVF 268
Cdd:PLN02392 233 ACANHKWYLEKFgEDYPKGRKAVIPFLY 260
PLN03164 PLN03164
3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal domain containing protein; Provisional
162-268 1.14e-12

3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal domain containing protein; Provisional


Pssm-ID: 215610 [Multi-domain]  Cd Length: 323  Bit Score: 66.76  E-value: 1.14e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15237245  162 GVVMFVVGIVGNLYHHVLLAKLRKEDGK-KEYKIPKGGLFDIIICPHYLFEILVFWSFFLISQ----TIY-SFSFAMGTM 235
Cdd:PLN03164 214 GAAIFLWGWIHQYRCHAILGSLREHKKQaDEYVIPYGDWFEMVSCPHYLAEIVIYAGLLIASGgtdlTIWlLFGFVVANL 293
                         90       100       110
                 ....*....|....*....|....*....|...
gi 15237245  236 LYLIGRsyaTRTWYLSKFDDFPKHIKALIPFVF 268
Cdd:PLN03164 294 TFAAAE---THRWYLQKFENYPRNRYAIIPFVY 323
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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