NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|22326785|ref|NP_196878|]
View 

zinc induced facilitator 1 [Arabidopsis thaliana]

Protein Classification

MFS transporter( domain architecture ID 13023689)

major facilitator superfamily (MFS) transporter facilitates the transport across cytoplasmic or internal membranes of one or more from a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides

CATH:  1.20.1250.20
Gene Ontology:  GO:0022857|GO:0055085|GO:0016020
SCOP:  3000310
TCDB:  2.A.1

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

Name Accession Description Interval E-value
MFS_SLC46_TetA_like cd17330
Eukaryotic Solute carrier 46 (SLC46) family, Bacterial Tetracycline resistance proteins, and ...
42-444 3.92e-60

Eukaryotic Solute carrier 46 (SLC46) family, Bacterial Tetracycline resistance proteins, and similar proteins of the Major Facilitator Superfamily of transporters; This family is composed of the eukaryotic proteins MFSD9, MFSD10, MFSD14, and SLC46 family proteins, as well as bacterial multidrug resistance (MDR) transporters such as tetracycline resistance protein TetA and multidrug resistance protein MdtG. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. TetA proteins confer resistance to tetracycline while MdtG confers resistance to fosfomycin and deoxycholate. The Solute carrier 46 (SLC46) family is composed of three vertebrate members (SLC46A1, SLC46A2, and SLC46A3), the best-studied of which is SLC46A1, which functions both as an intestinal proton-coupled high-affinity folate transporter involved in the absorption of folates and as an intestinal heme transporter which mediates heme uptake. MFSD10 facilitates the uptake of organic anions such as some non-steroidal anti-inflammatory drugs (NSAIDs) and confers resistance to such NSAIDs. The SLC46/TetA-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


:

Pssm-ID: 340888 [Multi-domain]  Cd Length: 349  Bit Score: 200.88  E-value: 3.92e-60
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785  42 VWIIVLSTSLPISSLYPFLYYMIEDFgvaKTEKDIGFYAGFVGCSFMLGRALTSVFWGIVADRYGRKPIILLGTISIAIF 121
Cdd:cd17330   1 LFLVVFLDALGFGIVFPVLPFYVREF---NKLGASGYYVGLLQSSYSLGQFLASPLWGRLSDRYGRKPVLLLSLAGSAVS 77
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785 122 NALFGLSSNFWMAIGTRFLLGSFNCLLGTMKAYASEIFRDEYQATAMSAVSTAWGIGLIIGPALGGFLAQPadkypnvfs 201
Cdd:cd17330  78 YVLLGLSRNLWLLFLARFLDGLTGGNVSVAQAYIADITDEEERAKAFGIISAAFGLGFILGPALGGFLSTP--------- 148
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785 202 qeslfgrFRYALPCFTISAFALLVTVLCCFIPetlhnhkldslshddsydileaashesspstgkagknerkasqsllkn 281
Cdd:cd17330 149 -------YGYALPFLVAAALALLNLVLVLFFL------------------------------------------------ 173
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785 282 WPLMSSIIVYCVLCLHDTAYSEIFALWANSPrkyggLSYSTNEVGTVLAISGLGLFSFQVFVYPLAEKLLGPVLVTRYAG 361
Cdd:cd17330 174 PPLRRLLLVYFLIALAFAGLESVFSLFLKDR-----FGFSPSQIGLLLALVGIAGILAQLLLIPRLAKRLGERKLLRLGL 248
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785 362 ALMIPIQMSYPFIAGLSGLSlslmlnCASILINVLSVSAITGLLILQNRAVDQSQRGAANGIAMTAMSLFKTVGPAGAGI 441
Cdd:cd17330 249 LLAIIGLLLLPFASSVPLLV------LAAAILAFGTGIVFPALSALLSKSVPSKEQGKAQGIIQSLQSLARIIGPLLAGP 322

                ...
gi 22326785 442 LFS 444
Cdd:cd17330 323 LYS 325
 
Name Accession Description Interval E-value
MFS_SLC46_TetA_like cd17330
Eukaryotic Solute carrier 46 (SLC46) family, Bacterial Tetracycline resistance proteins, and ...
42-444 3.92e-60

Eukaryotic Solute carrier 46 (SLC46) family, Bacterial Tetracycline resistance proteins, and similar proteins of the Major Facilitator Superfamily of transporters; This family is composed of the eukaryotic proteins MFSD9, MFSD10, MFSD14, and SLC46 family proteins, as well as bacterial multidrug resistance (MDR) transporters such as tetracycline resistance protein TetA and multidrug resistance protein MdtG. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. TetA proteins confer resistance to tetracycline while MdtG confers resistance to fosfomycin and deoxycholate. The Solute carrier 46 (SLC46) family is composed of three vertebrate members (SLC46A1, SLC46A2, and SLC46A3), the best-studied of which is SLC46A1, which functions both as an intestinal proton-coupled high-affinity folate transporter involved in the absorption of folates and as an intestinal heme transporter which mediates heme uptake. MFSD10 facilitates the uptake of organic anions such as some non-steroidal anti-inflammatory drugs (NSAIDs) and confers resistance to such NSAIDs. The SLC46/TetA-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340888 [Multi-domain]  Cd Length: 349  Bit Score: 200.88  E-value: 3.92e-60
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785  42 VWIIVLSTSLPISSLYPFLYYMIEDFgvaKTEKDIGFYAGFVGCSFMLGRALTSVFWGIVADRYGRKPIILLGTISIAIF 121
Cdd:cd17330   1 LFLVVFLDALGFGIVFPVLPFYVREF---NKLGASGYYVGLLQSSYSLGQFLASPLWGRLSDRYGRKPVLLLSLAGSAVS 77
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785 122 NALFGLSSNFWMAIGTRFLLGSFNCLLGTMKAYASEIFRDEYQATAMSAVSTAWGIGLIIGPALGGFLAQPadkypnvfs 201
Cdd:cd17330  78 YVLLGLSRNLWLLFLARFLDGLTGGNVSVAQAYIADITDEEERAKAFGIISAAFGLGFILGPALGGFLSTP--------- 148
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785 202 qeslfgrFRYALPCFTISAFALLVTVLCCFIPetlhnhkldslshddsydileaashesspstgkagknerkasqsllkn 281
Cdd:cd17330 149 -------YGYALPFLVAAALALLNLVLVLFFL------------------------------------------------ 173
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785 282 WPLMSSIIVYCVLCLHDTAYSEIFALWANSPrkyggLSYSTNEVGTVLAISGLGLFSFQVFVYPLAEKLLGPVLVTRYAG 361
Cdd:cd17330 174 PPLRRLLLVYFLIALAFAGLESVFSLFLKDR-----FGFSPSQIGLLLALVGIAGILAQLLLIPRLAKRLGERKLLRLGL 248
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785 362 ALMIPIQMSYPFIAGLSGLSlslmlnCASILINVLSVSAITGLLILQNRAVDQSQRGAANGIAMTAMSLFKTVGPAGAGI 441
Cdd:cd17330 249 LLAIIGLLLLPFASSVPLLV------LAAAILAFGTGIVFPALSALLSKSVPSKEQGKAQGIIQSLQSLARIIGPLLAGP 322

                ...
gi 22326785 442 LFS 444
Cdd:cd17330 323 LYS 325
MFS_1 pfam07690
Major Facilitator Superfamily;
42-436 3.88e-24

Major Facilitator Superfamily;


Pssm-ID: 429598 [Multi-domain]  Cd Length: 344  Bit Score: 103.27  E-value: 3.88e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785    42 VWIIVLSTSLPISSLYPFL-YYMIEDFGVAKTEkdigfyAGFVGCSFMLGRALTSVFWGIVADRYGRKPIILLGTISIAI 120
Cdd:pfam07690   1 LFLAAFLAALGRSLLGPALpLLLAEDLGISPTE------IGLLLTLFSLGYALAQPLAGRLSDRFGRRRVLLIGLLLFAL 74
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785   121 FNALFGLSSNFWMAIGTRFLLGSFN-CLLGTMKAYASEIFRDEYQATAMSAVSTAWGIGLIIGPALGGFLAQpadkypnv 199
Cdd:pfam07690  75 GLLLLLFASSLWLLLVLRVLQGLGAgALFPAALALIADWFPPEERGRALGLVSAGFGLGAALGPLLGGLLAS-------- 146
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785   200 fsqeslFGRFRYAlpcFTISAFALLVTVLCCFIPETLHNHKLdslshddsydileaashesSPSTGKAGKNERKASQSLL 279
Cdd:pfam07690 147 ------LFGWRAA---FLILAILSLLAAVLLLLPRPPPESKR-------------------PKPAEEARLSLIVAWKALL 198
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785   280 KNWPLMSSIIVYCVLCLhdtayseIFALWANSPRKYGGLSYSTNEVGTVLAISGLGLFSFQVFVYPLAEKlLGPVLVTRY 359
Cdd:pfam07690 199 RDPVLWLLLALLLFGFA-------FFGLLTYLPLYQEVLGLSALLAGLLLGLGGLLGAIGRLLLGRLSDR-LGRRRRLLL 270
                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 22326785   360 AGALMIPIQMSYPFIAGLSGLSLSLmlnCASILINVLSVSAITGLLILQNRAVDQSQRGAANGIAMTAMSLFKTVGP 436
Cdd:pfam07690 271 ALLLLILAALGLLLLSLTLSSLWLL---LALLLLGFGFGLVFPALNALVSDLAPKEERGTASGLYNTAGSLGGALGP 344
AraJ COG2814
Predicted arabinose efflux permease AraJ, MFS family [Carbohydrate transport and metabolism];
39-430 6.04e-24

Predicted arabinose efflux permease AraJ, MFS family [Carbohydrate transport and metabolism];


Pssm-ID: 442063 [Multi-domain]  Cd Length: 348  Bit Score: 102.74  E-value: 6.04e-24
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785  39 LSFVWIIVLSTSLPISSLYPFLYYMIEDFGVAKTEkdigfyAGFVGCSFMLGRALTSVFWGIVADRYGRKPIILLGTISI 118
Cdd:COG2814  12 LLALALGAFLSGLGIGIVLPALPLIAADLGASPAQ------AGLVVTAYLLGAALGAPLAGRLADRFGRRRVLLLGLLLF 85
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785 119 AIFNALFGLSSNFWMAIGTRFLLG-SFNCLLGTMKAYASEIFRDEYQATAMSAVSTAWGIGLIIGPALGGFLAQPADkyp 197
Cdd:COG2814  86 ALGSLLCALAPSLWLLLAARFLQGlGAGALFPAALALIADLVPPERRGRALGLLGAGLGLGPALGPLLGGLLADLFG--- 162
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785 198 nvfsqeslfgrfrYALPCFTISAFALLVTVLC-CFIPETLHNHKldslshddsydileaashesspstgkagKNERKASQ 276
Cdd:COG2814 163 -------------WRWVFLVNAVLALLALLLLlRLLPESRPAAR----------------------------ARLRGSLR 201
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785 277 SLLKNWPLMSSIIVYCVLCLHDTAYSEIFALWANSPrkyggLSYSTNEVGTVLAISGLGLFSFQVFVYPLAEKlLGPVLV 356
Cdd:COG2814 202 ELLRRPRLLLLLLLAFLLGFGFFALFTYLPLYLQEV-----LGLSASAAGLLLALFGLGGVLGALLAGRLADR-FGRRRL 275
                       330       340       350       360       370       380       390
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 22326785 357 TRYAGALMIPIQMSYPFIAGLSGLSLslmlncASILINVLSVSAITGLLILQNRAVDQSQRGAANGIAMTAMSL 430
Cdd:COG2814 276 LLIGLLLLALGLLLLALAGSLWLLLL------ALFLLGFGFGLLFPLLQALVAELAPPEARGRASGLYNSAFFL 343
2_A_01_02 TIGR00880
Multidrug resistance protein;
86-235 1.85e-15

Multidrug resistance protein;


Pssm-ID: 273318 [Multi-domain]  Cd Length: 141  Bit Score: 73.07  E-value: 1.85e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785    86 SFMLGRALTSVFWGIVADRYGRKPIILLGTISIAIFNALFGLSSNFWMAIGTRFLLGSF-NCLLGTMKAYASEIFRDEYQ 164
Cdd:TIGR00880   6 GYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGaAFALVAGAALIADIYPPEER 85
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 22326785   165 ATAMSAVSTAWGIGLIIGPALGGFLAQpadkypnvfsqeslFGRFRYalPCFTISAFALLVTV-LCCFIPET 235
Cdd:TIGR00880  86 GVALGLMSAGIALGPLLGPPLGGVLAQ--------------FLGWRA--PFLFLAILALAAFIlLAFLLPET 141
PRK09874 PRK09874
multidrug efflux MFS transporter MdtG;
39-221 7.08e-12

multidrug efflux MFS transporter MdtG;


Pssm-ID: 182127 [Multi-domain]  Cd Length: 408  Bit Score: 66.87  E-value: 7.08e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785   39 LSFVWIIVLSTSLPISSLYPFLYYMIEDFGVAKtEKDIGFYAGFVGCSFMLGRALTSVFWGIVADRYGRKPIILLGTISI 118
Cdd:PRK09874  16 LTVAWLGCFLTGAAFSLVMPFLPLYVEQLGVTG-HSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSALGM 94
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785  119 AIFNALFGLSSNFWMAIGTRFLLGSFNCLLGTMKAY-ASEIFRDEyQATAMSAVSTAWGIGLIIGPALGGFLAQPADKYP 197
Cdd:PRK09874  95 GIVMVLMGLAQNIWQFLILRALLGLLGGFVPNANALiATQVPRNK-SGWALGTLSTGGVSGALLGPLAGGLLADSYGLRP 173
                        170       180
                 ....*....|....*....|....
gi 22326785  198 NVFSQESLFgrfryaLPCFTISAF 221
Cdd:PRK09874 174 VFFITASVL------FLCFLVTLF 191
 
Name Accession Description Interval E-value
MFS_SLC46_TetA_like cd17330
Eukaryotic Solute carrier 46 (SLC46) family, Bacterial Tetracycline resistance proteins, and ...
42-444 3.92e-60

Eukaryotic Solute carrier 46 (SLC46) family, Bacterial Tetracycline resistance proteins, and similar proteins of the Major Facilitator Superfamily of transporters; This family is composed of the eukaryotic proteins MFSD9, MFSD10, MFSD14, and SLC46 family proteins, as well as bacterial multidrug resistance (MDR) transporters such as tetracycline resistance protein TetA and multidrug resistance protein MdtG. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. TetA proteins confer resistance to tetracycline while MdtG confers resistance to fosfomycin and deoxycholate. The Solute carrier 46 (SLC46) family is composed of three vertebrate members (SLC46A1, SLC46A2, and SLC46A3), the best-studied of which is SLC46A1, which functions both as an intestinal proton-coupled high-affinity folate transporter involved in the absorption of folates and as an intestinal heme transporter which mediates heme uptake. MFSD10 facilitates the uptake of organic anions such as some non-steroidal anti-inflammatory drugs (NSAIDs) and confers resistance to such NSAIDs. The SLC46/TetA-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340888 [Multi-domain]  Cd Length: 349  Bit Score: 200.88  E-value: 3.92e-60
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785  42 VWIIVLSTSLPISSLYPFLYYMIEDFgvaKTEKDIGFYAGFVGCSFMLGRALTSVFWGIVADRYGRKPIILLGTISIAIF 121
Cdd:cd17330   1 LFLVVFLDALGFGIVFPVLPFYVREF---NKLGASGYYVGLLQSSYSLGQFLASPLWGRLSDRYGRKPVLLLSLAGSAVS 77
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785 122 NALFGLSSNFWMAIGTRFLLGSFNCLLGTMKAYASEIFRDEYQATAMSAVSTAWGIGLIIGPALGGFLAQPadkypnvfs 201
Cdd:cd17330  78 YVLLGLSRNLWLLFLARFLDGLTGGNVSVAQAYIADITDEEERAKAFGIISAAFGLGFILGPALGGFLSTP--------- 148
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785 202 qeslfgrFRYALPCFTISAFALLVTVLCCFIPetlhnhkldslshddsydileaashesspstgkagknerkasqsllkn 281
Cdd:cd17330 149 -------YGYALPFLVAAALALLNLVLVLFFL------------------------------------------------ 173
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785 282 WPLMSSIIVYCVLCLHDTAYSEIFALWANSPrkyggLSYSTNEVGTVLAISGLGLFSFQVFVYPLAEKLLGPVLVTRYAG 361
Cdd:cd17330 174 PPLRRLLLVYFLIALAFAGLESVFSLFLKDR-----FGFSPSQIGLLLALVGIAGILAQLLLIPRLAKRLGERKLLRLGL 248
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785 362 ALMIPIQMSYPFIAGLSGLSlslmlnCASILINVLSVSAITGLLILQNRAVDQSQRGAANGIAMTAMSLFKTVGPAGAGI 441
Cdd:cd17330 249 LLAIIGLLLLPFASSVPLLV------LAAAILAFGTGIVFPALSALLSKSVPSKEQGKAQGIIQSLQSLARIIGPLLAGP 322

                ...
gi 22326785 442 LFS 444
Cdd:cd17330 323 LYS 325
MFS_MdtG_SLC18_like cd17325
bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator ...
42-445 1.88e-27

bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily of transporters; This family is composed of eukaryotic solute carrier 18 (SLC18) family transporters and related bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as multidrug resistance protein MdtG, from Bacillus subtilis such as multidrug resistance proteins 1 (Bmr1) and 2 (Bmr2), and from Staphylococcus aureus such as quinolone resistance protein NorA. The family also includes Escherichia coli arabinose efflux transporters YfcJ and YhhS. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The SLC18 transporter family includes vesicular monoamine transporters (VAT1 and VAT2), vesicular acetylcholine transporter (VAChT), and SLC18B1, which is proposed to be a vesicular polyamine transporter (VPAT). The MdtG/SLC18 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340883 [Multi-domain]  Cd Length: 375  Bit Score: 113.05  E-value: 1.88e-27
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785  42 VWIIVLSTSLPISSLYPFLYYMIEDFGVAKTEkdIGFYAGfvgcSFMLGRALTSVFWGIVADRYGRKPIILLGTISIAIF 121
Cdd:cd17325   1 LSLALFLDMLGYGIIIPILPLYAESLGASVAQ--IGLIVA----AYALAQLLFSPPAGRLSDRFGRKRLLLLGLLLLAVS 74
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785 122 NALFGLSSNFWMAIGTRFLLGSFNCLLGTMK-AYASEIFRDEYQATAMSAVSTAWGIGLIIGPALGGFLAQpadkypnvf 200
Cdd:cd17325  75 TLLFAFATSYWQLLLARFLQGLASAAVWPAAmALIADIAPPEERGRAMGIFSSAIGLGFLIGPLLGGLLAD--------- 145
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785 201 sqeslfgRFRYALPCFTISAFALLVTVLCCFIPETlhnhkldslshddsydileaaSHESSPSTGKAGKNERKASQSLLK 280
Cdd:cd17325 146 -------ALGYRAPFLVCAALALLALVLALLLLPE---------------------PRPPPNKRAVSAARLRSGLRLLLR 197
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785 281 NWPLmssIIVYCVLCLHDTAYSEIFALWANSPRKYGGLSYStnEVGTVLAISGLGLFSFQVFVYPLAEKLLGPVLVTryA 360
Cdd:cd17325 198 DRRL---LALFLAIFVLAFAFGALEPFLPLYAAELGGLSPA--QIGLLFGAQGLASALSQPPAGKLSDRIGRKPLIL--I 270
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785 361 GALMIPIqmSYPFIAGLSGLSLSLMLNCASILINVLSVSAITGLLIlqnRAVDQSQRGAANGIAMTAMSLFKTVGPAGAG 440
Cdd:cd17325 271 GLLLSAV--ALLLLPLATSFWLLLLLLALLGLGLGLVFPATLALLA---DIVPPEGRGTAMGLFNTAFSLGMVLGPLLGG 345

                ....*
gi 22326785 441 ILFSW 445
Cdd:cd17325 346 FLYDA 350
MFS_1 pfam07690
Major Facilitator Superfamily;
42-436 3.88e-24

Major Facilitator Superfamily;


Pssm-ID: 429598 [Multi-domain]  Cd Length: 344  Bit Score: 103.27  E-value: 3.88e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785    42 VWIIVLSTSLPISSLYPFL-YYMIEDFGVAKTEkdigfyAGFVGCSFMLGRALTSVFWGIVADRYGRKPIILLGTISIAI 120
Cdd:pfam07690   1 LFLAAFLAALGRSLLGPALpLLLAEDLGISPTE------IGLLLTLFSLGYALAQPLAGRLSDRFGRRRVLLIGLLLFAL 74
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785   121 FNALFGLSSNFWMAIGTRFLLGSFN-CLLGTMKAYASEIFRDEYQATAMSAVSTAWGIGLIIGPALGGFLAQpadkypnv 199
Cdd:pfam07690  75 GLLLLLFASSLWLLLVLRVLQGLGAgALFPAALALIADWFPPEERGRALGLVSAGFGLGAALGPLLGGLLAS-------- 146
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785   200 fsqeslFGRFRYAlpcFTISAFALLVTVLCCFIPETLHNHKLdslshddsydileaashesSPSTGKAGKNERKASQSLL 279
Cdd:pfam07690 147 ------LFGWRAA---FLILAILSLLAAVLLLLPRPPPESKR-------------------PKPAEEARLSLIVAWKALL 198
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785   280 KNWPLMSSIIVYCVLCLhdtayseIFALWANSPRKYGGLSYSTNEVGTVLAISGLGLFSFQVFVYPLAEKlLGPVLVTRY 359
Cdd:pfam07690 199 RDPVLWLLLALLLFGFA-------FFGLLTYLPLYQEVLGLSALLAGLLLGLGGLLGAIGRLLLGRLSDR-LGRRRRLLL 270
                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 22326785   360 AGALMIPIQMSYPFIAGLSGLSLSLmlnCASILINVLSVSAITGLLILQNRAVDQSQRGAANGIAMTAMSLFKTVGP 436
Cdd:pfam07690 271 ALLLLILAALGLLLLSLTLSSLWLL---LALLLLGFGFGLVFPALNALVSDLAPKEERGTASGLYNTAGSLGGALGP 344
AraJ COG2814
Predicted arabinose efflux permease AraJ, MFS family [Carbohydrate transport and metabolism];
39-430 6.04e-24

Predicted arabinose efflux permease AraJ, MFS family [Carbohydrate transport and metabolism];


Pssm-ID: 442063 [Multi-domain]  Cd Length: 348  Bit Score: 102.74  E-value: 6.04e-24
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785  39 LSFVWIIVLSTSLPISSLYPFLYYMIEDFGVAKTEkdigfyAGFVGCSFMLGRALTSVFWGIVADRYGRKPIILLGTISI 118
Cdd:COG2814  12 LLALALGAFLSGLGIGIVLPALPLIAADLGASPAQ------AGLVVTAYLLGAALGAPLAGRLADRFGRRRVLLLGLLLF 85
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785 119 AIFNALFGLSSNFWMAIGTRFLLG-SFNCLLGTMKAYASEIFRDEYQATAMSAVSTAWGIGLIIGPALGGFLAQPADkyp 197
Cdd:COG2814  86 ALGSLLCALAPSLWLLLAARFLQGlGAGALFPAALALIADLVPPERRGRALGLLGAGLGLGPALGPLLGGLLADLFG--- 162
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785 198 nvfsqeslfgrfrYALPCFTISAFALLVTVLC-CFIPETLHNHKldslshddsydileaashesspstgkagKNERKASQ 276
Cdd:COG2814 163 -------------WRWVFLVNAVLALLALLLLlRLLPESRPAAR----------------------------ARLRGSLR 201
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785 277 SLLKNWPLMSSIIVYCVLCLHDTAYSEIFALWANSPrkyggLSYSTNEVGTVLAISGLGLFSFQVFVYPLAEKlLGPVLV 356
Cdd:COG2814 202 ELLRRPRLLLLLLLAFLLGFGFFALFTYLPLYLQEV-----LGLSASAAGLLLALFGLGGVLGALLAGRLADR-FGRRRL 275
                       330       340       350       360       370       380       390
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 22326785 357 TRYAGALMIPIQMSYPFIAGLSGLSLslmlncASILINVLSVSAITGLLILQNRAVDQSQRGAANGIAMTAMSL 430
Cdd:COG2814 276 LLIGLLLLALGLLLLALAGSLWLLLL------ALFLLGFGFGLLFPLLQALVAELAPPEARGRASGLYNSAFFL 343
UhpC COG2271
Sugar phosphate permease [Carbohydrate transport and metabolism];
28-191 4.71e-20

Sugar phosphate permease [Carbohydrate transport and metabolism];


Pssm-ID: 441872 [Multi-domain]  Cd Length: 363  Bit Score: 91.47  E-value: 4.71e-20
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785  28 KQLRRGYPYLELSFVWIIVLSTSLPISSLYPFLYYMIEDFGVAKTEkdigfyAGFVGCSFMLGRALTSVFWGIVADRYGR 107
Cdd:COG2271   1 ARAPSRYRWRILALLFLAYFLNYLDRSNLSVAAPPLQADLGLSAAQ------LGLLASAFFLGYALGQIPAGLLADRFGR 74
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785 108 KPIILLGTISIAIFNALFGLSSNFWMAIGTRFLLGSFN-CLLGTMKAYASEIFRDEYQATAMSAVSTAWGIGLIIGPALG 186
Cdd:COG2271  75 RRVLAIGLLLWGLATLLFGFATSFWQLLLLRFLLGLGEaGFFPAALKLIAEWFPPKERGRALGIFNAGGPLGGALAPPLL 154

                ....*
gi 22326785 187 GFLAQ 191
Cdd:COG2271 155 GWLLA 159
MFS cd06174
Major Facilitator Superfamily; The Major Facilitator Superfamily (MFS) is a large and diverse ...
42-445 2.39e-18

Major Facilitator Superfamily; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3-phosphate transporter), LacY (lactose permease), and EmrD (multidrug transporter), MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement. Bacterial members function primarily for nutrient uptake, and as drug-efflux pumps to confer antibiotic resistance. Some MFS proteins have medical significance in humans such as the glucose transporter Glut4, which is impaired in type II diabetes, and glucose-6-phosphate transporter (G6PT), which causes glycogen storage disease when mutated.


Pssm-ID: 349949 [Multi-domain]  Cd Length: 378  Bit Score: 86.71  E-value: 2.39e-18
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785  42 VWIIVLSTSLPISSLYPFLYYMIEDFGVAKTekdigfYAGFVGCSFMLGRALTSVFWGIVADRYGRKPIILLGTISIAIF 121
Cdd:cd06174   1 LLLGFFLTGLARGLISPLLPALLQSFGLSAS------QLGLLFALFSLGYALLQPLAGLLADRFGRRPVLLLGLLLFALG 74
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785 122 NALFGLSSNFWMAIGTRFLLGSFNCLLGT-MKAYASEIFRDEYQATAMSAVSTAWGIGLIIGPALGGFLAqpadkypnvf 200
Cdd:cd06174  75 ALLFAFAPSFWLLLLGRFLLGLGSGLIDPaVLALIADLFPERERGRALGLLQAFGSVGGILGPLLGGILA---------- 144
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785 201 sqesLFGRFRYALPCFTISAFALLVTVLCCFIPETLHNHKLDSLSHDDSYDILEAAShesspstgkagknerkasqSLLK 280
Cdd:cd06174 145 ----SSLGFGWRAVFLIAAALALLAAILLLLVVPDPPESARAKNEEASSKSVLKLLK-------------------RVLK 201
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785 281 NWPLMSSIIVYcvlCLHDTAYSEIFALWANSPRKYGGLSYStnEVGTVLAISGLGLFSFQVFVYPLAEKLLGPVLVTRYA 360
Cdd:cd06174 202 NPGLWLLLLAI---FLVNLAYYSFSTLLPLFLLDLGGLSVA--VAGLLLSLFGLAGALGSLLLGLLSDRLIGRKPLLLIG 276
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785 361 GALMIPIQMSYPFIAGLSGLSLSLmlncasILINVLSVSAITGLLILQNRAVDQSQRGAANGIAMTAMSLFKTVGPAGAG 440
Cdd:cd06174 277 LLLMALGLALLLLAPSLLLLLLLL------LLLGFGLGGLLPLSFALIAELFPPEIRGTAFGLLNTFGFLGGAIGPLLAG 350

                ....*
gi 22326785 441 ILFSW 445
Cdd:cd06174 351 FLLAA 355
MFS_MdtG_MDR_like cd17391
Multidrug resistance protein MdtG and similar multidrug resistance (MDR) transporters of the ...
42-191 2.73e-16

Multidrug resistance protein MdtG and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This subfamily is composed of Escherichia coli multidrug resistance protein MdtG, Streptococcus pneumoniae multidrug resistance efflux pump PmrA, and similar multidrug resistance (MDR) transporters from bacteria. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. MdtG confers resistance to fosfomycin and deoxycholate. PmrA serves as an efflux pump for various substrates and is associated with fluoroquinolone resistance. MdtG-like MDR transporters belong to the bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340949 [Multi-domain]  Cd Length: 380  Bit Score: 80.39  E-value: 2.73e-16
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785  42 VWIIVLSTSLPISSLYPFLYYMIEDFGVAKTEkDIGFYAGFV-GCSFmLGRALTSVFWGIVADRYGRKPIILLGTISIAI 120
Cdd:cd17391   1 CWLGNFFTGIGFSLIAPFLPLYIEQLGVTSGG-LVELWSGLAfSSTF-LVSAIFSPIWGRLADRYGRKPMLLRASLGMAI 78
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 22326785 121 FNALFGLSSNFWMAIGTRFLLGSFNCLLGTMKAYASEIFRDEYQATAMSAVSTAWGIGLIIGPALGGFLAQ 191
Cdd:cd17391  79 VIGLMAFVTNVWQLLILRLLQGVFSGYVPNATALIASQTPKEKSGWALGTLSTGVVAGTLIGPLLGGFLAD 149
ProP COG0477
MFS family permease, includes anhydromuropeptide permease AmpG [Carbohydrate transport and ...
53-191 9.82e-16

MFS family permease, includes anhydromuropeptide permease AmpG [Carbohydrate transport and metabolism, Amino acid transport and metabolism, Inorganic ion transport and metabolism, General function prediction only];


Pssm-ID: 440245 [Multi-domain]  Cd Length: 295  Bit Score: 77.54  E-value: 9.82e-16
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785  53 ISSLYPFLYYMIEDFGVAKTekdigfYAGFVGCSFMLGRALTSVFWGIVADRYGRKPIILLGTISIAIFNALFGLSSNFW 132
Cdd:COG0477  30 FTIVNVALPSIAADLGASSA------QLGWIVSAYLLGRAIGLLLFGRLGDRYGRKRVLLIGLLLFGLASLLCGLAPSPE 103
                        90       100       110       120       130       140
                ....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785 133 MAIGTRFLLGSFNCLL-GTMKAYASEIFRDEYQATAMSAVSTAWGIGLIIGPALGGFLAQ 191
Cdd:COG0477 104 LLIAARALQGIGAGGLmPGALALIAELFPARERGRALGLWGAAIGLGLALGPLLGGLLVA 163
2_A_01_02 TIGR00880
Multidrug resistance protein;
86-235 1.85e-15

Multidrug resistance protein;


Pssm-ID: 273318 [Multi-domain]  Cd Length: 141  Bit Score: 73.07  E-value: 1.85e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785    86 SFMLGRALTSVFWGIVADRYGRKPIILLGTISIAIFNALFGLSSNFWMAIGTRFLLGSF-NCLLGTMKAYASEIFRDEYQ 164
Cdd:TIGR00880   6 GYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGaAFALVAGAALIADIYPPEER 85
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 22326785   165 ATAMSAVSTAWGIGLIIGPALGGFLAQpadkypnvfsqeslFGRFRYalPCFTISAFALLVTV-LCCFIPET 235
Cdd:TIGR00880  86 GVALGLMSAGIALGPLLGPPLGGVLAQ--------------FLGWRA--PFLFLAILALAAFIlLAFLLPET 141
MFS_MdfA_MDR_like cd17320
Multidrug transporter MdfA and similar multidrug resistance (MDR) transporters of the Major ...
87-240 5.32e-13

Multidrug transporter MdfA and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This family is composed of bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as MdfA (also called chloramphenicol resistance pump Cmr), EmrD, MdtM, MdtL, bicyclomycin resistance protein (also called sulfonamide resistance protein), and the uncharacterized inner membrane transport protein YdhC. EmrD is a proton-dependent secondary transporter, first identified as an efflux pump for uncouplers of oxidative phosphorylation. It expels a range of drug molecules and amphipathic compounds across the inner membrane of E. coli. Similarly, MdfA is a secondary multidrug transporter that exports a broad spectrum of structurally and electrically dissimilar toxic compounds. These MDR transporters are drug/H+ antiporters (DHA) belonging to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340878 [Multi-domain]  Cd Length: 379  Bit Score: 70.30  E-value: 5.32e-13
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785  87 FMLGRALTSVFWGIVADRYGRKPIILLGTISIAIFNALFGLSSNFWMAIGTRFLLGSFNCLLGTM-KAYASEIFRDEYQA 165
Cdd:cd17320  43 YLLGFALGQLLYGPLSDRFGRRPVLLAGLLLFILASLLCALASSIEQLLIARFLQGLGAAAGSVVaRAIVRDLYSGAELA 122
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 22326785 166 TAMSAVSTAWGIGLIIGPALGGFLAQpadkypnVFSQESLFgrfryalpcFTISAFALLVTVLCC-FIPETLHNHK 240
Cdd:cd17320 123 KIFSLLMMILAIAPALAPLLGGLLLL-------FFGWRAIF---------VFLALLGLLLLLLVLlFLPETLPEEK 182
FucP COG0738
Fucose permease [Carbohydrate transport and metabolism];
39-233 9.41e-13

Fucose permease [Carbohydrate transport and metabolism];


Pssm-ID: 440501 [Multi-domain]  Cd Length: 391  Bit Score: 69.50  E-value: 9.41e-13
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785  39 LSFVWIIVLSTSLPISSLYPFLYYMIEDFGVAKTEkdigfyAGFVGCSFMLGRALTSVFWGIVADRYGRKPIILLGTISI 118
Cdd:COG0738  10 LIAIYLLFFLWGFATALWGPLIPALKDAFGLSDAQ------AGLLLFAFFLGYLLASLPAGRLIDRFGYKRGLLLGLLLM 83
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785 119 AIFNALFGLSSNFWMAIGTRFLLGSFNCLLGT-MKAYASEIFRdEYQATAMSAVSTAWGIGLIIGPALGGFLaqpadkyp 197
Cdd:COG0738  84 ALGLLLFALAPSYPLLLLALFLLGLGLGLLDVaANPYVAALGP-ETAASRLNLLHAFFSLGALLGPLLGGLL-------- 154
                       170       180       190
                ....*....|....*....|....*....|....*.
gi 22326785 198 nVFSQESLFGRFRYALpcftISAFALLVTVLCCFIP 233
Cdd:COG0738 155 -ILLGLSLSWHLPYLI----LAVLLLLLALLFLRSK 185
MFS_Tpo1_MDR_like cd17323
Yeast Polyamine transporter 1 (Tpo1) and similar multidrug resistance (MDR) transporters of ...
44-191 1.15e-12

Yeast Polyamine transporter 1 (Tpo1) and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This family is composed of fungal multidrug resistance (MDR) transporters including several proteins from Saccharomyces cerevisiae such as polyamine transporters 1-4 (Tpo1-4), quinidine resistance proteins 1-3 (Qdr1-3), dityrosine transporter 1 (Dtr1), fluconazole resistance protein 1 (Flr1), and protein HOL1. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. For example, Flr1 confers resistance to the azole derivative fluconazole while Tpo1 confers resistance and adaptation to quinidine and ketoconazole. The polyamine transporters are involved in the detoxification of excess polyamines in the cytoplasm. Tpo1-like MDR transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340881 [Multi-domain]  Cd Length: 376  Bit Score: 69.14  E-value: 1.15e-12
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785  44 IIVLSTSLPISSLYPFLYYMIEDFGVAKTEKDIGFyagfvgCSFMLGRALTSVFWGIVADRYGRKPIILLGTISIAIFNA 123
Cdd:cd17323   6 FLTFVVTFGSSIYSPALPQIAEDFHVSEEVANLGV------SLFVLGFGLGPLIWAPLSELYGRRPVYLVSLFIFVIFQI 79
                        90       100       110       120       130       140
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 22326785 124 LFGLSSNFWMAIGTRFLLGSF-NCLLGTMKAYASEIFRDEYQATAMSAVSTAWGIGLIIGPALGGFLAQ 191
Cdd:cd17323  80 GCALAPNIAMLIILRFLQGFFgSSPLAIGAGTIADLFTPEERGKAMGVYSLGPLLGPALGPIIGGFITQ 148
MFS_YfmO_like cd17474
Bacillus subtilis multidrug efflux protein YfmO and similar transporters of the Major ...
42-190 1.59e-12

Bacillus subtilis multidrug efflux protein YfmO and similar transporters of the Major Facilitator Superfamily; This family is composed of Bacillus subtilis multidrug efflux protein YfmO, bacillibactin exporter YmfD/YmfE, uncharacterized MFS-type transporter YvmA, and similar proteins. YfmO acts to efflux copper or a copper complex, and could contribute to copper resistance. YmfD/YmfE is involved in secretion of bacillibactin. The YfmO-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341027 [Multi-domain]  Cd Length: 374  Bit Score: 68.75  E-value: 1.59e-12
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785  42 VWIIVLST---SLPISSLYPFLYYMIEDFGVAKTEkdigfyAGFVGCSFMLGRALTSVFWGIVADRYGRKPIILLGTISI 118
Cdd:cd17474   1 LYAVFFATllaVLGVSIVDPILPAIAEALGASPAQ------VGLLITAFTLPAAVLMPVAGVLADRFGRKKVLLPGLLLF 74
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 22326785 119 AIFNALFGLSSNFWMAIGTRFLLGSFNCLLGTMK-AYASEIFRDEYQATAMSAVSTAWGIGLIIGPALGGFLA 190
Cdd:cd17474  75 GIGGLLCGLSDSFALLLAGRALQGIGAAGLGPLAlTLIGDLFEGGERAKAMGLYEAALGLGIAVGPLLGGLLA 147
MFS_NepI_like cd17324
Purine ribonucleoside efflux pump NepI and similar transporters of the Major Facilitator ...
80-445 5.46e-12

Purine ribonucleoside efflux pump NepI and similar transporters of the Major Facilitator Superfamily; This family is composed of purine efflux pumps such as Escherichia coli NepI and Bacillus subtilis PbuE, sugar efflux transporters such as Corynebacterium glutamicum arabinose efflux permease, multidrug resistance (MDR) transporters such as Streptomyces lividans chloramphenicol resistance protein (CmlR), and similar proteins. NepI and PbuE are involved in the efflux of purine ribonucleosides such as guanosine, adenosine and inosine, as well as purine bases like guanine, adenine, and hypoxanthine, and purine base analogs. They play a role in the maintenance of cellular purine base pools, as well as in protecting the cells and conferring resistance against toxic purine base analogs such as 6-mercaptopurine. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The NepI-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340882 [Multi-domain]  Cd Length: 370  Bit Score: 67.19  E-value: 5.46e-12
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785  80 AGFVGCSFMLGRALTSVFWGIVADRYGRKPIILLGTISIAIFNALFGLSSNFWMAIGTRFLLGSFNCLL-GTMKAYASEI 158
Cdd:cd17324  36 AGLLVSAYALGYALGALLLGPLSDRIERRRLLLVLLLLFILGNLLAALAPSFALLLLARALAGLAHGGFwAIAAAYAADL 115
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785 159 FRDEYQATAMSAVSTAWGIGLIIGPALGGFLAQpadkypnvfsqesLFGrFRYALpcFTISAFALLVTVLCCF-IPETLH 237
Cdd:cd17324 116 VPPEKRGRAIGLVFSGLTLGLVLGRPLGGLLGQ-------------LLG-WRAAF--LAIAVLALLAALLLWRlLPSLPP 179
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785 238 NHkldslshddsydileaashessPSTGKAGKNERKasqsLLKNWPLMSS-IIVYCVLCLHDTAYSEIfALWANSPrkyG 316
Cdd:cd17324 180 KK----------------------PGSLGLLSSLLL----LLRNPRLRLAyLITFLLFGGFFALYTYL-APFLTDV---P 229
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785 317 GLSYSTneVGTVLAISGLGLFSFQVFVYPLAEKLLGPVLVTryAGALMIPIQMSYPFIAGLSGLslslmlncASILINVL 396
Cdd:cd17324 230 GFSSSA--IIGLLLLFGVAGVVGSPLAGRLADRGGRRALLI--ALLLLAAALLLLTLLGPSPLL--------LLVGLVLW 297
                       330       340       350       360       370
                ....*....|....*....|....*....|....*....|....*....|.
gi 22326785 397 SVSAITGLLILQNRAVD--QSQRGAANGIAMTAMSLFKTVGPAGAGILFSW 445
Cdd:cd17324 298 GLGFFAAHSALQTRVLRlaPEARGLASSLYLAAYNLGGALGAALGGLVLDH 348
MFS_MMR_MDR_like cd17321
Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance ...
86-191 5.83e-12

Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This family is composed of bacterial, fungal, and archaeal multidrug resistance (MDR) transporters including several proteins from Bacilli such as methylenomycin A resistance protein (also called MMR peptide), tetracycline resistance protein (TetB), and lincomycin resistance protein LmrB, as well as fungal proteins such as vacuolar basic amino acid transporters, which are involved in the transport into vacuoles of the basic amino acids histidine, lysine, and arginine in Saccharomyces cerevisiae, and aminotriazole/azole resistance proteins. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. For example, MMR confers resistance to the epoxide antibiotic methylenomycin while TetB resistance to tetracycline by an active tetracycline efflux. MMR-like MDR transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340879 [Multi-domain]  Cd Length: 370  Bit Score: 67.20  E-value: 5.83e-12
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785  86 SFMLGRALTSVFWGIVADRYGRKPIILLGTISIAIFNALFGLSSNFWMAIGTRFLLG-SFNCLLGTMKAYASEIFRDEYQ 164
Cdd:cd17321  39 AYLLAFAALLLLAGRLGDRFGRKRVFLIGLALFGLASLLCALAPSLAFLIAARALQGiGAAAIMPASLALIAATFPGERR 118
                        90       100
                ....*....|....*....|....*..
gi 22326785 165 ATAMSAVSTAWGIGLIIGPALGGFLAQ 191
Cdd:cd17321 119 GRALGLWGAVVGIGAALGPLLGGLLLE 145
MFS_MJ1317_like cd17370
MJ1317 and similar transporters of the Major Facilitator Superfamily; This family is composed ...
57-191 6.78e-12

MJ1317 and similar transporters of the Major Facilitator Superfamily; This family is composed of Methanocaldococcus jannaschii MFS-type transporter MJ1317, Mycobacterium bovis protein Mb2288, and similar proteins. They are uncharacterized transporters belonging to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340928 [Multi-domain]  Cd Length: 371  Bit Score: 66.80  E-value: 6.78e-12
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785  57 YPFLYYMIEDFGVAKTEKdIGFYAGFvgcsfMLGRALTSVFWGIVADRYGRKPIILLGTISIAIFNALFGLSSNFWMAIG 136
Cdd:cd17370 219 FAFLILRAQELGLSAALI-PLLYALF-----NLVYALAAYPAGRLSDRIGRKKLLILGYLSLALAYLGFALGSSLWLLLL 292
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|....*.
gi 22326785 137 TRFLLGSFNCL-LGTMKAYASEIFRDEYQATAMSAVSTAWGIGLIIGPALGGFLAQ 191
Cdd:cd17370 293 GFILWGLYMGAqESIERAAVADLVPAELRGTAYGLFNTVVGIGWLLASLIAGYLWD 348
PRK09874 PRK09874
multidrug efflux MFS transporter MdtG;
39-221 7.08e-12

multidrug efflux MFS transporter MdtG;


Pssm-ID: 182127 [Multi-domain]  Cd Length: 408  Bit Score: 66.87  E-value: 7.08e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785   39 LSFVWIIVLSTSLPISSLYPFLYYMIEDFGVAKtEKDIGFYAGFVGCSFMLGRALTSVFWGIVADRYGRKPIILLGTISI 118
Cdd:PRK09874  16 LTVAWLGCFLTGAAFSLVMPFLPLYVEQLGVTG-HSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSALGM 94
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785  119 AIFNALFGLSSNFWMAIGTRFLLGSFNCLLGTMKAY-ASEIFRDEyQATAMSAVSTAWGIGLIIGPALGGFLAQPADKYP 197
Cdd:PRK09874  95 GIVMVLMGLAQNIWQFLILRALLGLLGGFVPNANALiATQVPRNK-SGWALGTLSTGGVSGALLGPLAGGLLADSYGLRP 173
                        170       180
                 ....*....|....*....|....
gi 22326785  198 NVFSQESLFgrfryaLPCFTISAF 221
Cdd:PRK09874 174 VFFITASVL------FLCFLVTLF 191
MFS_MdtH_MDR_like cd17329
Multidrug resistance protein MdtH and similar multidrug resistance (MDR) transporters of the ...
39-444 7.73e-12

Multidrug resistance protein MdtH and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This family is composed of Escherichia coli MdtH and similar multidrug resistance (MDR) transporters from bacteria and archaea, many of which remain uncharacterized. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. MdtH confers resistance to norfloxacin and enoxacin. MdtH-like MDR transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340887 [Multi-domain]  Cd Length: 376  Bit Score: 66.87  E-value: 7.73e-12
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785  39 LSFVWIIVLSTSLPISSLYPFLY-YMIEDFGVAKTekdigfYAGFVGCSFMLGRALTSVFWGIVADRYGRKPIILLGTIS 117
Cdd:cd17329   1 LWVLLIGSFLNRLGFFMVWPFMAiYLHQQLGLSAS------IVGLVLALSAVAGIVASLIGGRLADRFGRKPVMLAGLLL 74
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785 118 IAIFNALFGLSSNFWMAIGTRFLLGSFNCLLGT-MKAYASEIFRDEYQATAMSAVSTAWGIGLIIGPALGGFLAQpadky 196
Cdd:cd17329  75 RALGFALLGFAHSPWLFAIALVLTGFGGGLFEPaSEAMIADVTTPENRTRAFSLLYWAINLGVAIGPLLGGLLLL----- 149
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785 197 pnvFSQESLFgrfryalpCFTISAFALLVTVLCCFIPETLHnhkldslshddsydileaashessPSTGKAGKNERKASQ 276
Cdd:cd17329 150 ---YSFRLLF--------LAAAVLFLLAALVLLFLLPETRP------------------------KRRAAEKTEILRGYK 194
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785 277 SLLKNWPLMssiivycVLCLHDTAYSEIFALWANSPRKYGG--LSYSTNEVGTVLAISGLGLFSFQVFVYPLAEKLlgPV 354
Cdd:cd17329 195 IVLRDRAFL-------LFLLASFLISLIYFQLESTLPVYVVeiLGLGESLLGLLLALNALLIVLLQFPVARLVERF--RL 265
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785 355 LVTRYAGALMipiqMSYPFIAGLSGLSLSLMLnCASILINVLSVSAITGLLILQNRAVDQSQRGAANGIAMTAMSLFKTV 434
Cdd:cd17329 266 RKILMIGILL----FAIGFAVLAFANTLAVLI-LAMIVLTLGEMLVFPAVQTLVAALAPPDKRGSYMGFYALAWGLGRAI 340
                       410
                ....*....|
gi 22326785 435 GPAGAGILFS 444
Cdd:cd17329 341 GPLVGGLLLD 350
MFS_MFSD10 cd17389
Major facilitator superfamily domain-containing protein 10; Major facilitator superfamily ...
79-237 1.65e-11

Major facilitator superfamily domain-containing protein 10; Major facilitator superfamily domain-containing protein 10 (MFSD10) is also called tetracycline transporter-like protein (TETRAN). It is expressed in various human tissues, including the kidney. In cultured cells, its overexpression facilitated the uptake of organic anions such as some non-steroidal anti-inflammatory drugs (NSAIDs). MFSD10/TETRAN overexpression cause resistance to some NSAIDs, suggesting that it may be an organic anion transporter that serves as an efflux pump for some NSAIDs and various other organic anions at the final excretion step. MFSD10 belongs to the Eukaryotic Solute carrier 46 (SLC46)/Bacterial Tetracycline resistance (TetA) -like (SLC46/TetA-like) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340947 [Multi-domain]  Cd Length: 391  Bit Score: 65.76  E-value: 1.65e-11
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785  79 YAGFVGCSFMLGRALTSVFWGIVADRYGRKPIILLGTISIAIFNALFGLSSNFWMAIGTRFLLG--SFNCLLGTmkAYAS 156
Cdd:cd17389  65 FGGLIGSLFSLLQFLSSPITGAASDVYGRKPVLLLTMIGLAISYALWAVSRSFTIFLLSRIVGGisKGNVSLST--AIVA 142
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785 157 EIFRDEYQATAMSAVSTAWGIGLIIGPALGGFLAQPADKYPNVFSQeslfgrfRYALPCFTISAFALLVTVlcCFIPETL 236
Cdd:cd17389 143 DVTSPKKRSKGMALIGVAFSLGFIIGPMIGAYFASFTRSLGEVFFS-------MPALFALVLALADLLFIF--FFLPETL 213

                .
gi 22326785 237 H 237
Cdd:cd17389 214 P 214
MFS_MFSD9 cd17390
Major facilitator superfamily domain-containing protein 9; Major facilitator superfamily ...
78-233 2.34e-11

Major facilitator superfamily domain-containing protein 9; Major facilitator superfamily domain-containing protein 9 (MFSD9) is expressed in the central nervous system (CNS) and in most peripheral tissues but at very low expression levels. The function of MFSD9 is unknown. MFSD9 belongs to the Eukaryotic Solute carrier 46 (SLC46)/Bacterial Tetracycline resistance (TetA) -like (SLC46/TetA-like) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340948 [Multi-domain]  Cd Length: 350  Bit Score: 64.94  E-value: 2.34e-11
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785  78 FYAGFVGCSFMLGRALTSVFWGIVADRYGRKPIILLGTISIAIFNALFGLSSNFWMAIGTRFLLGSFNCLLGTMKAYASE 157
Cdd:cd17390  31 TVIGLIGSVYGALQLFSSPLVGSWSDVVGRRPVLLICLLLTALGYVLLGFSTSLALLFLSRIPLGIFKHTQSLCKAYLSD 110
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 22326785 158 IFRDEYQATAMSAVSTAWGIGLIIGPALGGFLAQpadkypnvfsqesLFGRFRYalPCFTISAFALLVTVLCCFIP 233
Cdd:cd17390 111 LVSEQERSRVLGRFNAASSLGFILGPVVGGHLAE-------------TDGGFYY--VALLCSAIFILNAGLVWFLL 171
PRK11102 PRK11102
Bcr/CflA family multidrug efflux MFS transporter;
86-237 4.81e-11

Bcr/CflA family multidrug efflux MFS transporter;


Pssm-ID: 182964 [Multi-domain]  Cd Length: 377  Bit Score: 64.17  E-value: 4.81e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785   86 SFMLGRALTSVFWGIVADRYGRKPIILLGTISIAIFNALFGLSSNFWMAIGTRFLLGSF--------NCLLGTMKAyase 157
Cdd:PRK11102  34 AYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQTIDQLIYMRFLHGLAaaaasvviNALMRDMFP---- 109
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785  158 ifRDEYqATAMSAVSTAWGIGLIIGPALGGFLAqpadkypNVFSQESLFgrfryalpcFTISAFALLVTVLCCF-IPETL 236
Cdd:PRK11102 110 --KEEF-SRMMSFVTLVMTIAPLLAPIIGGWLL-------VWFSWHAIF---------WVLALAAILAAALVFFfIPETL 170

                 .
gi 22326785  237 H 237
Cdd:PRK11102 171 P 171
MFS_YfcJ_like cd17489
Escherichia coli YfcJ, YhhS, and similar transporters of the Major Facilitator Superfamily; ...
80-240 8.44e-11

Escherichia coli YfcJ, YhhS, and similar transporters of the Major Facilitator Superfamily; This subfamily is composed of Escherichia coli membrane proteins, YfcJ and YhhS, Bacillus subtilis uncharacterized MFS-type transporter YwoG, and similar proteins. YfcJ and YhhS are putative arabinose efflux transporters. YhhS has been implicated glyphosate resistance. YfcJ-like arabinose efflux transporters belong to the bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341042 [Multi-domain]  Cd Length: 367  Bit Score: 63.38  E-value: 8.44e-11
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785  80 AGFVGCSFMLGRALTSVFWGIVADRYGRKPIILLGTISIAIFNALFGLSSNFWMAIGTRFLLG-SFNCLLGTMKAYASEI 158
Cdd:cd17489  33 AGLVVGLFTLAALLARPFAGRLLDRFGRKRLLLIGLLIFALATLLYLLATSVALLLVLRLIHGiGWGAFTTAAATLVADI 112
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785 159 FRDEYQATAMSAVSTAWGIGLIIGPALGGFLAQpadkypnvfsqeslfgRFRYALPCFTISAFALLVTVLCCFIPETLHN 238
Cdd:cd17489 113 IPPSRRGEGIGYYGLATTLAMALGPALGLFLYQ----------------HLGFAVLFIVAAVLALLALLLVFLVKDPPPV 176

                ..
gi 22326785 239 HK 240
Cdd:cd17489 177 AA 178
MFS_TetA cd17388
Tetracycline resistance protein TetA and related proteins of the Major Facilitator Superfamily ...
39-446 1.33e-10

Tetracycline resistance protein TetA and related proteins of the Major Facilitator Superfamily of transporters; This subfamily is composed of tetracycline resistance proteins similar to Escherichia coli TetA(A), TetA(B), and TetA(E), which are metal-tetracycline/H(+) antiporters that confer resistance to tetracycline by an active tetracycline efflux, which is an energy-dependent process that decreases the accumulation of the antibiotic in cells. TetA-like tetracycline resistance proteins belongs to the Eukaryotic Solute carrier 46 (SLC46)/Bacterial Tetracycline resistance (TetA) -like (SLC46/TetA-like) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340946 [Multi-domain]  Cd Length: 385  Bit Score: 63.04  E-value: 1.33e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785  39 LSFVWIIVLSTSLPISSLYPFLYYMIEDFGVAKTekDIGFYAGFVGCSFMLGRALTSVFWGIVADRYGRKPIILLGTISI 118
Cdd:cd17388   1 LIFILVTVLLDAMGIGLIMPVLPTLLREFVGDSA--DAATHYGVLLALYALMQFIFAPILGALSDRFGRRPVLLLSLAGA 78
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785 119 AIFNALFGLSSNFWMAIGTRFLLGSFNCLLGTMKAYASEIFRDEYQATAMSAVSTAWGIGLIIGPALGGFLAQpadkypn 198
Cdd:cd17388  79 ALDYLLMAFAPTLWWLYLGRIIAGITGATGAVAAAYIADVTPPEQRARNFGLLGAAFGLGFIAGPALGGLLGE------- 151
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785 199 vfsqeslfgrFRYALPCFTISAFALLVTVLCCFI-PETLHNHKLdslshddsydileaashessPSTGKAGKNERKASQS 277
Cdd:cd17388 152 ----------ISPRAPFLVAAGLNGLNFLLGLFVlPESLPPERR--------------------RAFRWRRANPFGSLRW 201
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785 278 LLKNWPLMSSIIVYCVLCLhdtAYSEIFALWAnsprKYGG--LSYSTNEVGTVLAISGLGLFSFQVFVYPLAEKLLGPvl 355
Cdd:cd17388 202 LTGFPGLLGLLAVFFLIQL---IGQVPATTWV----LFTEdrFDWSPTMVGLSLAVFGLLHALFQAFVTGPIAKRLGE-- 272
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785 356 vtryAGALMIPIQMS------YPFIAGLSGLSLSLMLNCASilinVLSVSAITGLLilqNRAVDQSQRGAANGIAMTAMS 429
Cdd:cd17388 273 ----KRAILLGLAADalgfllLAFATQGWMVFPILILLALG----GIAGPALQGLL---SRQVPENEQGELQGVLTSLTS 341
                       410
                ....*....|....*..
gi 22326785 430 LFKTVGPAGAGILFSWS 446
Cdd:cd17388 342 LTSIIGPLLFTGIFAAS 358
MFS_SLC22 cd17317
Solute carrier 22 (SLC22) family of organic cation/anion/zwitterion transporters of the Major ...
78-233 1.94e-10

Solute carrier 22 (SLC22) family of organic cation/anion/zwitterion transporters of the Major Facilitator Superfamily; The Solute carrier 22 (SLC22) family of organic cation/anion/zwitterion transporters includes organic cation transporters (OCTs), organic zwitterion/cation transporters (OCTNs), and organic anion transporters (OATs). SLC22 transporters interact with a variety of compounds that include drugs of abuse, environmental toxins, opioid analgesics, antidepressant and anxiolytic agents, and neurotransmitters and their metabolites. The SLC22 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340875 [Multi-domain]  Cd Length: 331  Bit Score: 62.21  E-value: 1.94e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785  78 FYAGFVGCSFMLGRALTSVFWGIVADRYGRKPIILLGTISIAIFNALFGLSSNFWMAIGTRFLLGSFNCLLGTMK-AYAS 156
Cdd:cd17317  25 WLVALVQTIFFLGVLIGSLLFGYLADRFGRRPVLLLGLVLQIVCGVLSAFSPSYELFLVLRFLVGVTSAGIFTVGfVLGM 104
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 22326785 157 EIFRDEYQATAMSAVSTAWGIGLIIGPALGgflaqpadkypnvfsqeSLFGRFRYALpcFTISAFALLVTVLCCFIP 233
Cdd:cd17317 105 EIVGPKYRSFVGILFGLFWALGYMLLALLA-----------------YLIRDWRWLQ--LAISLPGLLFLLLLWWLP 162
AraJ COG2814
Predicted arabinose efflux permease AraJ, MFS family [Carbohydrate transport and metabolism];
39-178 2.38e-10

Predicted arabinose efflux permease AraJ, MFS family [Carbohydrate transport and metabolism];


Pssm-ID: 442063 [Multi-domain]  Cd Length: 348  Bit Score: 61.91  E-value: 2.38e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785  39 LSFVWIIVLSTSLPISSLYPFL-YYMIEDFGVAKTEkdigfyAGFVGCSFMLGRALTSVFWGIVADRYGRKPIILLGTIS 117
Cdd:COG2814 209 LLLLLLLAFLLGFGFFALFTYLpLYLQEVLGLSASA------AGLLLALFGLGGVLGALLAGRLADRFGRRRLLLIGLLL 282
                        90       100       110       120       130       140
                ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 22326785 118 IAIFNALFGLSSNFWMAIGTRFLLG-SFNCLLGTMKAYASEIFRDEYQATAMSAVSTAWGIG 178
Cdd:COG2814 283 LALGLLLLALAGSLWLLLLALFLLGfGFGLLFPLLQALVAELAPPEARGRASGLYNSAFFLG 344
2A0115 TIGR00895
benzoate transport; [Transport and binding proteins, Carbohydrates, organic alcohols, and ...
80-189 3.56e-10

benzoate transport; [Transport and binding proteins, Carbohydrates, organic alcohols, and acids]


Pssm-ID: 273327 [Multi-domain]  Cd Length: 398  Bit Score: 61.60  E-value: 3.56e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785    80 AGFVGCSFMLGRALTSVFWGIVADRYGRKPIILLGTISIAIFNALFGLSSNFWMAIGTRFLLG-SFNCLLGTMKAYASEI 158
Cdd:TIGR00895  54 LGFLFSAGLIGMAFGALFFGPLADRIGRRRVLLWSILLFSVFTLLCALATNVTQLLILRFLAGlGLGGLMPNLNALVSEY 133
                          90       100       110
                  ....*....|....*....|....*....|.
gi 22326785   159 FRDEYQATAMSAVSTAWGIGLIIGPALGGFL 189
Cdd:TIGR00895 134 APKRFRGTAVGLMFCGYPIGAAVGGFLAGWL 164
MFS cd06174
Major Facilitator Superfamily; The Major Facilitator Superfamily (MFS) is a large and diverse ...
39-200 6.63e-10

Major Facilitator Superfamily; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3-phosphate transporter), LacY (lactose permease), and EmrD (multidrug transporter), MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement. Bacterial members function primarily for nutrient uptake, and as drug-efflux pumps to confer antibiotic resistance. Some MFS proteins have medical significance in humans such as the glucose transporter Glut4, which is impaired in type II diabetes, and glucose-6-phosphate transporter (G6PT), which causes glycogen storage disease when mutated.


Pssm-ID: 349949 [Multi-domain]  Cd Length: 378  Bit Score: 60.90  E-value: 6.63e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785  39 LSFVWIIVLSTSLPISSLYPFLYYMIEDFGVAktekdigfYAGFVGCSFMLGRALTSVFWGIVADRY-GRKPIILLGTIS 117
Cdd:cd06174 208 LLLAIFLVNLAYYSFSTLLPLFLLDLGGLSVA--------VAGLLLSLFGLAGALGSLLLGLLSDRLiGRKPLLLIGLLL 279
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785 118 IAIFNALFGLSSNFWMAIGTRFLLGSFNCLL-GTMKAYASEIFRDEYQATAMSAVSTAWGIGLIIGPALGGFLAQPADKY 196
Cdd:cd06174 280 MALGLALLLLAPSLLLLLLLLLLLGFGLGGLlPLSFALIAELFPPEIRGTAFGLLNTFGFLGGAIGPLLAGFLLAATFGL 359

                ....
gi 22326785 197 PNVF 200
Cdd:cd06174 360 TGAF 363
MFS_MefA_like cd06173
Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of ...
77-445 7.09e-10

Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of transporters; This family is composed of Streptococcus pyogenes macrolide efflux protein A (MefA) and similar transporters, many of which remain uncharacterized. Some members may be multidrug resistance (MDR) transporters, which are drug/H+ antiporters (DHAs) that mediate the efflux of a variety of drugs and toxic compounds, conferring resistance to these compounds. MefA confers resistance to 14-membered macrolides including erythromycin and to 15-membered macrolides. It functions as an efflux pump to regulate intracellular macrolide levels. The MefA-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340863 [Multi-domain]  Cd Length: 383  Bit Score: 60.71  E-value: 7.09e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785  77 GFYAGFVGCSFMLGRALTSVFWGIVADRYGRKPIILLGTISIAIFNALFGL-----SSNFWMAIGTRFLLGSFNCLLG-T 150
Cdd:cd06173  33 ALLVGLVLAAFFLPFLLFSPFAGVLADRFDRRRLLILADLLRALLAAVLALlallgSLSLWLLLVLAFLLGIASAFFGpA 112
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785 151 MKAYASEIFRDEYQATAMSAVSTAWGIGLIIGPALGGFLAqpadkypnvfsqeSLFGrfryALPCFTISAFALLVTVLCC 230
Cdd:cd06173 113 RQALLPELVPKEQLVRANALNSLATQLARIIGPALGGLLV-------------ALLG----PGGAFAINALSFLLSALLL 175
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785 231 -FIPETLHnhkldslshddsydilEAASHESSPSTGKAgkneRKASQSLLKNWPLMSSIIVYCVLCLHDTAYSEIFALWA 309
Cdd:cd06173 176 lFIRRPPP----------------AAPGESSSLLLRDL----REGLRYLRRSPLLRLLLLALALFALLGGALTVLLPLLA 235
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785 310 NSPrkyggLSYSTNEVGTVLAISGLGLFSFQVFVYPLAEKLLGPVLVTRYA---GALMIPIQMSYPFIAGLSglslslml 386
Cdd:cd06173 236 KEV-----LGGGAAGYGLLLAAFGVGALLGALLLGRLSKRRRRGRLLLIGAlllGLALLVLGLSPSLWLLLA-------- 302
                       330       340       350       360       370
                ....*....|....*....|....*....|....*....|....*....|....*....
gi 22326785 387 ncASILINVLSVSAITGLLILQNRAVDQSQRGAANGIAMTAMSLFKTVGPAGAGILFSW 445
Cdd:cd06173 303 --ALFLLGLAGGLFNVPLNTLLQLRVPDELRGRVFSVYNALNSGAMPLGALLAGLLADA 359
UhpC COG2271
Sugar phosphate permease [Carbohydrate transport and metabolism];
42-191 1.87e-09

Sugar phosphate permease [Carbohydrate transport and metabolism];


Pssm-ID: 441872 [Multi-domain]  Cd Length: 363  Bit Score: 59.11  E-value: 1.87e-09
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785  42 VWIIVLSTSLPISSLYPFLY----YMIEDFGVAKTEkdigfyAGFVGCSFMLGRALTSVFWGIVADRYGR--KPIILLGT 115
Cdd:COG2271 182 FWLLALAYFLVYFALYGFLTwlptYLVEVRGLSLAQ------AGLLLSLPFLAGIVGSLLGGWLSDRLGRrrKLVLAIGL 255
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 22326785 116 ISIAIFNALFGLSSNFWMAIGTRFLLGSF-NCLLGTMKAYASEIFRDEYQATAMSAVSTAWGIGLIIGPALGGFLAQ 191
Cdd:COG2271 256 LLAALALLLLALLPSPALAIALLFLAGFGlGGAFGLLWALAAELFPKKARGTASGLVNTFGFLGGALGPLLVGYLLD 332
NarK COG2223
Nitrate/nitrite transporter NarK [Inorganic ion transport and metabolism];
39-191 2.01e-09

Nitrate/nitrite transporter NarK [Inorganic ion transport and metabolism];


Pssm-ID: 441825 [Multi-domain]  Cd Length: 392  Bit Score: 59.12  E-value: 2.01e-09
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785  39 LSFVWIIVLSTSLPISSLYPFLYYMIEDFGVAKTEKdigfyaGFVGCSFMLGRALTSVFWGIVADRYGRKPIILLGTISI 118
Cdd:COG2223   7 LLLATLAFFLAFGVWYLWSVLAPPLAEEFGLSAAQL------GLLFAIPVLVGALLRIPLGFLVDRFGPRRVLLIGLLLL 80
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 22326785 119 AIFNALFGLSSNFWMAIGTRFLLG-----SFNCLLgtmkAYASEIFRDEYQATAMSAVSTAWGIGLIIGPALGGFLAQ 191
Cdd:COG2223  81 GIGLLLLALAVSYWLLLLLGLLLGiggggSFAVGI----ALVSKWFPPDRRGLALGLAAGGGNLGAAVAAFLAPLLIA 154
MFS_SV2_like cd17316
Metazoan Synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters of the ...
80-189 3.04e-09

Metazoan Synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters of the Major Facilitator Superfamily; This family is composed of metazoan synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters including those that transport inorganic phosphate (Pht), aromatic compounds (PcaK and related proteins), proline/betaine (ProP), alpha-ketoglutarate (KgtP), citrate (CitA), shikimate (ShiA), and cis,cis-muconate (MucK), among others. SV2 is a transporter-like protein that serves as the receptor for botulinum neurotoxin A (BoNT/A), one of seven neurotoxins produced by the bacterium Clostridium botulinum. BoNT/A blocks neurotransmitter release by cleaving synaptosome-associated protein of 25 kD (SNAP-25) within presynaptic nerve terminals. Also included in this family is synaptic vesicle 2 (SV2)-related protein (SVOP) and similar proteins. SVOP is a transporter-like nucleotide binding protein that localizes to neurotransmitter-containing vesicles. The SV2-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340874 [Multi-domain]  Cd Length: 353  Bit Score: 58.38  E-value: 3.04e-09
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785  80 AGFVGCSFMLGRALTSVFWGIVADRYGRKPIILLGTISIAIFNALFGLSSNFWMAIGTRFLLG-SFNCLLGTMKAYASEI 158
Cdd:cd17316  38 TGLLFAAGFLGRPIGALLFGYLGDRIGRKKALILTLLLFGLATLLIGLLPTPILLLVLRFLQGiGIGGEYPGASTYVAEF 117
                        90       100       110
                ....*....|....*....|....*....|.
gi 22326785 159 FRDEYQATAMSAVSTAWGIGLIIGPALGGFL 189
Cdd:cd17316 118 APSKRRGFALGLLQSGWALGALLAALVASLL 148
NarK COG2223
Nitrate/nitrite transporter NarK [Inorganic ion transport and metabolism];
42-234 3.77e-09

Nitrate/nitrite transporter NarK [Inorganic ion transport and metabolism];


Pssm-ID: 441825 [Multi-domain]  Cd Length: 392  Bit Score: 58.35  E-value: 3.77e-09
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785  42 VWIIVLSTSLPISSLYPFLY----YMIEDFGVakTEKDIGFYAGFVGCSFMLGRaltsVFWGIVADRYGRKPIILLGTIS 117
Cdd:COG2223 207 FWLLSLLYFGTFGSFIGFSSwlppYLVDQFGL--SAATAGLLAALFALLGALGR----PLGGWLSDRIGGRRVLLIVFAL 280
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785 118 IAIFNALFGLSS-NFWMAIGTRFLLGSFNCL-LGTMKAYASEIFRDEYQATAMSAVSTAWGIGLIIGPALGGFLAQpadk 195
Cdd:COG2223 281 MALGLLLLALALgSLWLFLVLFLLLGLALGGgNGAVFALVPDIFPTKNAGAVYGLVGAAGGLGGFLGPLLFGALLD---- 356
                       170       180       190
                ....*....|....*....|....*....|....*....
gi 22326785 196 ypnvfsqesLFGRFRYALpcFTISAFALLVTVLCCFIPE 234
Cdd:COG2223 357 ---------ATGSYTAAF--LVFAVLALVALVLTLLLYR 384
MFS_MucK cd17371
Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily; ...
76-191 5.42e-09

Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily; This subfamily is composed of Acinetobacter sp. Cis,cis-muconate transport protein (MucK), Escherichia coli putative sialic acid transporter 1, and similar proteins. MucK functions in the uptake of muconate and allows Acinetobacter calcoaceticus ADP1 (BD413) to grow on exogenous cis,cis-muconate as the sole carbon source. The MucK subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340929 [Multi-domain]  Cd Length: 389  Bit Score: 58.08  E-value: 5.42e-09
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785  76 IGFYAGFVGCSFMLGRALTSVFWGIVADRYGRKPIILLGTISIAIFNALFGLSSNFWMAIGTRFLLG-SFNCLLGTMKAY 154
Cdd:cd17371  32 DEAEAGLLGTVTLAGGAIGGILGGILADRFGRVRVLVITILLFAVFTLLCGFAQNYWQLLILRALAGlGFGGEWAAGAAL 111
                        90       100       110
                ....*....|....*....|....*....|....*..
gi 22326785 155 ASEIFRDEYQATAMSAVSTAWGIGLIIGPALGGFLAQ 191
Cdd:cd17371 112 MAEYVPARHRGKALGYVQSGWAVGWLLATLLAALLFP 148
MFS_SLC22A18 cd17331
Solute carrier family 22 member 18 of the Major Facilitator Superfamily of transporters; ...
99-444 6.88e-09

Solute carrier family 22 member 18 of the Major Facilitator Superfamily of transporters; Solute carrier family 22 member 18 (SLC22A18) is also called Beckwith-Wiedemann syndrome chromosomal region 1 candidate gene A protein (BWR1A or BWSCR1A), efflux transporter-like protein, imprinted multi-membrane-spanning polyspecific transporter-related protein 1 (IMPT1), organic cation transporter-like protein 2 (ORCTL2), or tumor-suppressing subchromosomal transferable fragment candidate gene 5 protein (TSSC5). It is localized at the apical membrane surface of renal proximal tubules and may act as an organic cation/proton antiporter. It functions as a tumor suppressor in several cancer types including glioblastoma and colorectal cancer. SLC22A18 belongs to the Eukaryotic Solute carrier 46 (SLC46)/Bacterial Tetracycline resistance (TetA) -like (SLC46/TetA-like) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340889 [Multi-domain]  Cd Length: 382  Bit Score: 57.61  E-value: 6.88e-09
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785  99 GIVADRYGRKPIILLGTISIAIFNALFGLSSNFWMAIGTRFLLGSFNCLLGTmKAYASEIFRDEYQATAMSAVSTAWGIG 178
Cdd:cd17331  56 GRFGDLFGPRAALVLSFLSSALSYLLLAFASSVPMLFLSRLPSVFMHAMQAA-QMVVTDLTDPGERAAALGRLGLSYGIG 134
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785 179 LIIGPALGGFLAqpadkypnvfsqeslfGRFRYALPCFTISAFALLVTVLCCFIPETL-----HNHKLDSLSHDDSYDIL 253
Cdd:cd17331 135 MVVGSFLGGLLT----------------KKFGEQAAALVAAVGSLLSIVLVILLIPSNtkskrEKEAKESASPPSVFNLK 198
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785 254 EAASHESSPSTgkagknerkASQSLLKNWPLMSSIIVYCVLCLhdtAYSEIFALwansprkygglsySTNEVGTVLAISG 333
Cdd:cd17331 199 EILRLLRLPGV---------AFLLLVKLLSGLPIGMFQSMFSL---VAMDFFGL-------------TPEENGYLMSYAG 253
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785 334 LGLFSFQVFVYPLAEKLLGPVLVTRYAGALMIPIQMSYPFIAGLSGLSLSLM-LNCASILINVLSVSAITgllilqnRAV 412
Cdd:cd17331 254 VLGMVVQGLLVGPLTKRFGERSLLKLSVALLAIGYLLLAFVTTVWQLLVLLLpLVIGGSVLYTVITSLLT-------KAV 326
                       330       340       350
                ....*....|....*....|....*....|..
gi 22326785 413 DQSQRGAANGIAMTAMSLFKTVGPAGAGILFS 444
Cdd:cd17331 327 PPEDTGTALGLSHALFSLVRTVSPTIGGALLQ 358
MFS_MT3072_like cd17475
Mycobacterium tuberculosis uncharacterized MFS-type transporter MT3072 and similar ...
43-190 2.12e-08

Mycobacterium tuberculosis uncharacterized MFS-type transporter MT3072 and similar transporters of the Major Facilitator Superfamily; This family includes the Mycobacterium tuberculosis uncharacterized MFS-type transporter MT3072. It belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341028 [Multi-domain]  Cd Length: 378  Bit Score: 56.09  E-value: 2.12e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785  43 WIIVLSTSLPISSLYPFLYYMIEDFGVAKTEkdIGFYAGFVGcsfmLGRALTSVFWGIVADRYGRKPIILLGTISIAIFN 122
Cdd:cd17475   2 TLAQAAASLVAQGIPALAPFLQEDLHLSLAQ--VGLLLSALN----LGVAVSMLPAGWLLDRFGERRVLAVGLLLMGAAA 75
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 22326785 123 ALFGLSSNFWMAIGTRFLLGSfncLLGTMKAYASEI----FRDEYQATAMSAVSTAWGIGLIIGPALGGFLA 190
Cdd:cd17475  76 LLMALVGSYPVLLVLLFLVGA---GYGSVQPGGGRAimrwFPPRERGLAMGIRQTGVPLGGALAAALLPPLA 144
MFS_Azr1_MDR_like cd17502
Saccharomyces cerevisiae Azole resistance protein 1 (Azr1p), and similar multidrug resistance ...
80-191 2.69e-08

Saccharomyces cerevisiae Azole resistance protein 1 (Azr1p), and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This subfamily is composed of multidrug resistance (MDR) transporters including various Saccharomyces cerevisiae proteins such as azole resistance protein 1 (Azr1p), vacuolar basic amino acid transporter 1 (Vba1p), vacuolar basic amino acid transporter 5 (Vba5p), and Sge1p (also known as Nor1p, 10-N-nonyl acridine orange resistance protein, and crystal violet resistance protein). MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. This subfamily belongs to the Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance (MDR) transporters (MMR-like MDR transporter) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341045 [Multi-domain]  Cd Length: 337  Bit Score: 55.65  E-value: 2.69e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785  80 AGFVGCSFMLGRALTSVFWGIVADRYGRKPIILLGTISIAIFNALFGLSSNFWMAIGTRFLLGSFNCLLGTMkAYA--SE 157
Cdd:cd17502  32 VSWVGTAYLLTSTAFQPIYGKLSDLFGRKWVLLIAIVIFELGSLLCGLAPNMTMLIVGRAIQGIGGGGLMSL-AFIiiAD 110
                        90       100       110
                ....*....|....*....|....*....|....
gi 22326785 158 IFRDEYQATAMSAVSTAWGIGLIIGPALGGFLAQ 191
Cdd:cd17502 111 LVPPRERGKYQGYIGAVFGIASVAGPLIGGAFTD 144
MFS_ExuT_GudP_like cd17319
Hexuronate transporter, Glucarate transporter, and similar transporters of the Major ...
62-190 3.65e-08

Hexuronate transporter, Glucarate transporter, and similar transporters of the Major Facilitator Superfamily; This family is composed of predominantly bacterial transporters for hexuronate (ExuT), glucarate (GudP), galactarate (GarP), and galactonate (DgoT). They mediate the uptake of these compounds into the cell. They belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340877 [Multi-domain]  Cd Length: 358  Bit Score: 55.27  E-value: 3.65e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785  62 YMIEDFGVAKTEKdigfyaGFVGCSFMLGRALTSVFWGIVADRYGRKPIILLGTISIAIFNALFGLSSNFWMAIGTRFLL 141
Cdd:cd17319  28 TIMKDLGLSPTQY------GLIASAFFLGYALFQVPGGWLLDRFGARKVLAVSMLLWSLFTALTGFATSLTSLYVLRFLL 101
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|
gi 22326785 142 GSFNC-LLGTMKAYASEIFRDEYQATAMSAVSTAWGIGLIIGPALGGFLA 190
Cdd:cd17319 102 GVAEAgFFPGAIKALAEWFPARERGRATGLFNSGAPLGAAIGPPLSGWLL 151
MFS_spinster_like cd17328
Protein spinster and spinster homologs of the Major Facilitator Superfamily of transporters; ...
60-191 3.85e-08

Protein spinster and spinster homologs of the Major Facilitator Superfamily of transporters; The protein spinster family includes Drosophila protein spinster, its vertebrate homologs, and similar proteins. Humans contain three homologs called protein spinster homologs 1 (SPNS1), 2 (SPNS2), and 3 (SPNS3). Protein spinster and its homologs may be sphingolipid transporters that play central roles in endosomes and/or lysosomes storage. SPNS2 is also called sphingosine 1-phosphate (S1P) transporter and is required for migration of myocardial precursors. S1P is a secreted lipid mediator that plays critical roles in cardiovascular, immunological, and neural development and function. The spinster-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340886 [Multi-domain]  Cd Length: 405  Bit Score: 55.32  E-value: 3.85e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785  60 LYYMiEDFGVA------KTEKDIG-FYAGFVGCSFMLGRALTSVFWGIVADRYGRKPIILLGTISIAIFNALFGLSSNFW 132
Cdd:cd17328  10 LNYM-DRFTIAgvlpdiQSDFLIDdSLAGLLQTVFIISYMVLSPIFGYLGDRYNRKWILAVGILIWSAATLLSSFAPNFW 88
                        90       100       110       120       130       140
                ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 22326785 133 MAIGTRFLLG----SFNCLLGTmkaYASEIFRDEYQATAMSAVSTAWGIGLIIGPALGGFLAQ 191
Cdd:cd17328  89 QLLLFRALVGigeaSYSPIAPT---IIADLFPKEKRTRALGVFYFAIPLGSGLGYVVGGLVAQ 148
MFS_SV2_like cd17316
Metazoan Synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters of the ...
39-190 4.04e-08

Metazoan Synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters of the Major Facilitator Superfamily; This family is composed of metazoan synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters including those that transport inorganic phosphate (Pht), aromatic compounds (PcaK and related proteins), proline/betaine (ProP), alpha-ketoglutarate (KgtP), citrate (CitA), shikimate (ShiA), and cis,cis-muconate (MucK), among others. SV2 is a transporter-like protein that serves as the receptor for botulinum neurotoxin A (BoNT/A), one of seven neurotoxins produced by the bacterium Clostridium botulinum. BoNT/A blocks neurotransmitter release by cleaving synaptosome-associated protein of 25 kD (SNAP-25) within presynaptic nerve terminals. Also included in this family is synaptic vesicle 2 (SV2)-related protein (SVOP) and similar proteins. SVOP is a transporter-like nucleotide binding protein that localizes to neurotransmitter-containing vesicles. The SV2-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340874 [Multi-domain]  Cd Length: 353  Bit Score: 54.92  E-value: 4.04e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785  39 LSFVWIIVLSTSLPISSLYPFLYYMIEDFGVAKtekdIGFYAGFVGCSFMLGraltSVFWGIVADRYGRKPIILLGTISI 118
Cdd:cd17316 182 LILLWFFISFGYYGLTTFLPTYLQTVLGLSPAT----SSLYLLLISLGALVG----ALIAGLLSDRIGRKKTLVIGLILS 253
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 22326785 119 AIFNALFG--LSSNFWMAIGTRFLLGSFNCLL-GTMKAYASEIFRDEYQATAMSAVSTAWGIGLIIGPALGGFLA 190
Cdd:cd17316 254 GILALPLFylLSGSPTLLLLLLFILSFFVGGVwGALYAYLAELFPTEVRATGVGLSYNLGRLGGGGAPPLIALLL 328
MFS_YfcJ_like cd17489
Escherichia coli YfcJ, YhhS, and similar transporters of the Major Facilitator Superfamily; ...
74-191 8.33e-08

Escherichia coli YfcJ, YhhS, and similar transporters of the Major Facilitator Superfamily; This subfamily is composed of Escherichia coli membrane proteins, YfcJ and YhhS, Bacillus subtilis uncharacterized MFS-type transporter YwoG, and similar proteins. YfcJ and YhhS are putative arabinose efflux transporters. YhhS has been implicated glyphosate resistance. YfcJ-like arabinose efflux transporters belong to the bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341042 [Multi-domain]  Cd Length: 367  Bit Score: 54.14  E-value: 8.33e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785  74 KDIGFYAGFVGCSFMLGRaltsVFWGIVADRYGRKPIILLGTISIAIFNALFGLSSNFWMAIGTRFLLG-SFNCLLGTMK 152
Cdd:cd17489 227 SNAGLFFTVYAIALLLSR----PFSGKLSDRKGPKTVIIPGLLLLALGLLLLSFAGSPWMLLLAAVLYGlGFGLLFPALQ 302
                        90       100       110
                ....*....|....*....|....*....|....*....
gi 22326785 153 AYASEIFRDEYQATAMSAVSTAWGIGLIIGPALGGFLAQ 191
Cdd:cd17489 303 ALAVDLVPPHRRGAANGTFFIFFDLGIGLGGLLLGLVAE 341
MFS_ShiA_like cd17369
Shikimate transporter and similar proteins of the Major Facilitator Superfamily; This ...
60-190 1.20e-07

Shikimate transporter and similar proteins of the Major Facilitator Superfamily; This subfamily is composed of Escherichia coli shikimate transporter (ShiA), inner membrane metabolite transport protein YhjE, and other putative metabolite transporters. ShiA is involved in the uptake of shikimate, an aromatic compound involved in siderophore biosynthesis. It has been suggested that YhjE may mediate the uptake of osmoprotectants. The ShiA-like subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340927 [Multi-domain]  Cd Length: 408  Bit Score: 53.68  E-value: 1.20e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785  60 LYYMIEDFGVAKTekdIGFYAGFVGCSFMlgrALTSVFWGIVADRYGRKPIILLGTISIAI----FNALFGLSSNFWMAI 135
Cdd:cd17369 252 LSYATQTLGVDRS---TVLLAVLIASVVA---AITIPLFGWLSDRVGRRPVYLAGALLAALfafpFFWLLDTGSTWLIVL 325
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|....*.
gi 22326785 136 GTRFLLGSFNCLL-GTMKAYASEIFRDEYQATAMSavstawgIGLIIGPALGGFLA 190
Cdd:cd17369 326 AAVVVLGVLHGMMyGPQAAFLAELFPTRVRYTGAS-------LGYQLGAILGGGFA 374
MFS_LmrB_MDR_like cd17503
Bacillus subtilis lincomycin resistance protein (LmrB) and similar multidrug resistance (MDR) ...
46-189 1.43e-07

Bacillus subtilis lincomycin resistance protein (LmrB) and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This subfamily is composed of multidrug resistance (MDR) transporters including Bacillus subtilis lincomycin resistance protein LmrB, and several proteins from Escherichia coli such as the putative MDR transporters EmrB, MdtD, and YieQ. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. For example, MMR confers resistance to the epoxide antibiotic methylenomycin. This subfamily belongs to the Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance (MDR) transporters (MMR-like MDR transporter) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341046 [Multi-domain]  Cd Length: 380  Bit Score: 53.35  E-value: 1.43e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785  46 VLSTSLPisslypflyYMIEDFGVAKTEkdigfyAGFVGCSFMLGRALTSVFWGIVADRYGRKPIILLGTISIAIFNALF 125
Cdd:cd17503  14 IVNVALP---------TIMGDLGASLDT------VQWVITSYLLALAIMIPLSGWLADRFGTRRLFLTALALFTLGSLLC 78
                        90       100       110       120       130       140
                ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 22326785 126 GLSSNFWMAIGTRFLLGSFNCLLG-TMKAYASEIFRDEYQATAMSAVSTAWGIGLIIGPALGGFL 189
Cdd:cd17503  79 GLAPNLASLIIFRILQGFGGGVLIpLAQTILLRIYPPEKRGAAMGLVGLVILLAPAIGPTLGGWL 143
CynX COG2807
Cyanate permease [Inorganic ion transport and metabolism];
42-191 2.28e-07

Cyanate permease [Inorganic ion transport and metabolism];


Pssm-ID: 442057 [Multi-domain]  Cd Length: 399  Bit Score: 52.95  E-value: 2.28e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785  42 VWIIVLSTSLPISSLYPFLYYMIEDFGVAKTEkdigfyAGFVGCSFMLGRALTSVFWGIVADRYGRKPIILLGTISIAIF 121
Cdd:COG2807  23 IVLVALNLRPAITSVGPLLPEIRADLGLSATQ------AGLLTTLPLLAFGLFAPLAPRLARRFGLERTLLLALLLLAAG 96
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 22326785 122 NALFGLSSNFWMAIGTRFLLG-----SFNCLLGTMKAYASeifrdEYQATAMSAVSTAWGIGLIIGPALGGFLAQ 191
Cdd:COG2807  97 LLLRSLAPSVALLLAGTALIGagiavGNVLLPGLIKRWFP-----DRVGLMTGLYTAAMGLGAALAAGLTVPLAA 166
MFS_YcaD_like cd17477
YcaD and similar transporters of the Major Facilitator Superfamily; This family is composed of ...
87-191 2.44e-07

YcaD and similar transporters of the Major Facilitator Superfamily; This family is composed of Escherichia coli MFS-type transporter YcaD, Bacillus subtilis MFS-type transporter YfkF, and similar proteins. They are uncharacterized transporters belonging to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341030 [Multi-domain]  Cd Length: 360  Bit Score: 52.56  E-value: 2.44e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785  87 FMLGRALTSVFWGIVADRYGRKPIILLGTISIAIFNALFGLSSNF-WMAIGTRFLLGSFnclLGTMK----AYASEIFRD 161
Cdd:cd17477 232 FVLGGLLLQWPLGWLADRFDRRRVLLGCALLGALAALLLPLVPGLpLALLVLLFLWGGA---AGPLYtlalALAGDRLPG 308
                        90       100       110
                ....*....|....*....|....*....|
gi 22326785 162 EYQATAMSAVSTAWGIGLIIGPALGGFLAQ 191
Cdd:cd17477 309 DELVAANAALLLLYGLGSVIGPLLAGALMD 338
MFS_arabinose_efflux_permease_like cd17473
Putative arabinose efflux permease family transporters of the Major Facilitator Superfamily; ...
89-191 2.99e-07

Putative arabinose efflux permease family transporters of the Major Facilitator Superfamily; This family includes a group of putative arabinose efflux permease family transporters, such as alpha proteobacterium quinolone resistance protein NorA (characterized Staphylococcus aureus Quinolone resistance protein NorA belongs to a different group), Desulfovibrio dechloracetivorans bacillibactin exporter, Vibrio aerogenes antiseptic resistance protein. The biological function of those transporters remain unclear. They belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341026 [Multi-domain]  Cd Length: 374  Bit Score: 52.58  E-value: 2.99e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785  89 LGRALTSVFWGIVADRYGRKPIILLGTISIAIFNALFGLSSNFWMAIGTRFLLGSfnCLLGTMK---AYASEIFRDEYQA 165
Cdd:cd17473  46 LFIALFAPLAGWLADRFGRKRLLIAGLLLYGIGGVAGLFLDSLYALLASRALLGI--GVAGIMTlatALIGDYFEGEERA 123
                        90       100
                ....*....|....*....|....*.
gi 22326785 166 TAMSAVSTAWGIGLIIGPALGGFLAQ 191
Cdd:cd17473 124 KMLGLQSAAMSLGGVVFLLLGGALAE 149
Sugar_tr pfam00083
Sugar (and other) transporter;
81-235 3.51e-07

Sugar (and other) transporter;


Pssm-ID: 395036 [Multi-domain]  Cd Length: 452  Bit Score: 52.27  E-value: 3.51e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785    81 GFVGCSFMLGRALTSVFWGIVADRYGRKPIILLGTISIAIFNALFGLS---SNFWMAIGTRFLLG-SFNCLLGTMKAYAS 156
Cdd:pfam00083  49 GLIVSIFSVGCFIGSLFAGKLGDRFGRKKSLLIANVLFVIGAVLQGAAkgkWSVYQLIVGRVLVGiGVGGASVLAPMYIS 128
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 22326785   157 EIFRDEYQATAMSAVSTAWgigliigpALGGFLAQPADKYPNVFSQESLFGrfryaLPCFTISAFALLVTVLCCFIPET 235
Cdd:pfam00083 129 EIAPKKLRGALGSLYQLAI--------TFGILLAYIFGLGLNKTSNSDGWR-----IPLGLQLVPALLLIIGLLFLPES 194
MFS_Set cd17471
Sugar efflux transporter (Set) family of the Major Facilitator Superfamily of transporters; ...
44-191 3.66e-07

Sugar efflux transporter (Set) family of the Major Facilitator Superfamily of transporters; This family is composed of sugar transporters such as Escherichia coli Sugar efflux transporter SetA, SetB, SetC and other sugar transporters. SetA, SetB, and SetC are involved in the efflux of sugars such as lactose, glucose, IPTG, and substituted glucosides or galactosides. They may be involved in the detoxification of non-metabolizable sugar analogs. The Set family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341024 [Multi-domain]  Cd Length: 371  Bit Score: 52.16  E-value: 3.66e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785  44 IIVLSTSLPISSLYPFL-YYMIEDFGVakTEKDIGFYagFVGCSfmLGRALTSVFWGIVADR-YGRKPIILLGTISIAIF 121
Cdd:cd17471   3 LATLLTGLAGAFVLPYLsLFLTEELGA--SPLQIGIF--MTLSA--LSGIVVSQWLGRLSDRgGDRKPLILLALLAGALG 76
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 22326785 122 NALFGLSSNFWMAIGTRFLLGSF-NCLLGTMKAYASEIF---RDEYQATAMSAVSTAWGIGLIIGPALGGFLAQ 191
Cdd:cd17471  77 YLLFAFLRNYWVLLLVGVVLLSLgAAAFPQLFALAREYAdrsSGRDATLFNSVLRAAFSLAWVIGPPLAFLLLD 150
MFS_MMR_MDR_like cd17504
Methylenomycin A resistance protein (also called MMR peptide)-like multidrug resistance (MDR) ...
44-233 4.06e-07

Methylenomycin A resistance protein (also called MMR peptide)-like multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This subfamily is composed of putative multidrug resistance (MDR) transporters including Chlamydia trachomatis antiseptic resistance protein QacA_2, and Serratia sp. DD3 Bmr3. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. This subfamily belongs to the Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance (MDR) transporters (MMR-like MDR transporter) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341047 [Multi-domain]  Cd Length: 371  Bit Score: 52.19  E-value: 4.06e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785  44 IIVLSTSLPISSLYPFLYYMIEDFGVAKTEkdigfyAGFVGCSFMLGRALTSVFWGIVADRYGRKPIILLGTISIAIFNA 123
Cdd:cd17504   3 LAALAVMLVETMLSPALPTIQREFGTSAAA------VSWVLTAYLLVGAVSTPILGRLGDLYGRKKVLLIVLAIYTAGSL 76
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785 124 LFGLSSNFWMAIGTRFLLGSFNCLLGTMKAYASEIFRDEYQATAMSAVSTAWGIGLIIGPALGGFLAQpadkypnvfsqe 203
Cdd:cd17504  77 LAAFAPNLPVLIAGRALQGIGGAVFPLAFALVREEFPPERVPVAQGILSATFGIGAGIGLPLGGWIVQ------------ 144
                       170       180       190
                ....*....|....*....|....*....|
gi 22326785 204 slFGRFRYALpcFTISAFALLVTVLCCFIP 233
Cdd:cd17504 145 --HLGWRWIF--WTAAPVAVLLAALVPLID 170
2A0119 TIGR00898
cation transport protein; [Transport and binding proteins, Cations and iron carrying compounds]
86-189 6.40e-07

cation transport protein; [Transport and binding proteins, Cations and iron carrying compounds]


Pssm-ID: 273328 [Multi-domain]  Cd Length: 505  Bit Score: 51.56  E-value: 6.40e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785    86 SFMLGRALTSVFWGIVADRYGRKPIILLGTISIAIFNALFGLSSNFWMAIGTRFLLGSF------NCL-LGTmkayasEI 158
Cdd:TIGR00898 135 CFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSPNYTVFLVFRLLVGMGiggiwvQAVvLNT------EF 208
                          90       100       110
                  ....*....|....*....|....*....|.
gi 22326785   159 FRDEYQATAMSAVSTAWGIGLIIGPALGGFL 189
Cdd:TIGR00898 209 LPKKQRAIVGTLIQVFFSLGLVLLPLVAYFI 239
MFS_TRI12_like cd06179
Fungal trichothecene efflux pump (TRI12) of the Major Facilitator Superfamily of transporters; ...
41-191 7.25e-07

Fungal trichothecene efflux pump (TRI12) of the Major Facilitator Superfamily of transporters; This family includes Fusarium sporotrichioides trichothecene efflux pump (TRI12), which may play a role in F. sporotrichioides self-protection against trichothecenes. TRI12 belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340868 [Multi-domain]  Cd Length: 518  Bit Score: 51.47  E-value: 7.25e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785  41 FVWIIVLSTSLPISSLYPFLYYMIEDFGVAKTekdigfyAGFVGCSFMLGRALTSVFWGIVADRYGRKPIILLGTISIAI 120
Cdd:cd06179   2 ALCLAYFAQLFGVTLPAAVLPFIVADLGPSSN-------STWISTAWSLAQAVLGPIVGRLSDLFGRRWFFIGGNLLGVV 74
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 22326785 121 FNALFGLSSNFWMAIGTRFLLGSFNCLLGTMKAYASEIFRDEYQATAMSAVSTAWGIGLIIGPALGGFLAQ 191
Cdd:cd06179  75 GSIVAGTAKSVNMLIGGQALIGIGAGTQGLGAAVASELVPNKYRGLVQGVVNLVASPGSALGPLIAGALVE 145
MelB COG2211
Na+/melibiose symporter or related transporter [Carbohydrate transport and metabolism];
25-240 8.96e-07

Na+/melibiose symporter or related transporter [Carbohydrate transport and metabolism];


Pssm-ID: 441813 [Multi-domain]  Cd Length: 447  Bit Score: 51.06  E-value: 8.96e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785  25 EQMKQLRRGYPYLelsFVWIIVLSTSLPISSLYP-FLYYMIEDFGVAKTekdigfYAGFVGCSFMLGRALTSVFWGIVAD 103
Cdd:COG2211 219 ESLKALLKNRPFL---LLLLAYLLFFLALALVAAlLLYYFKYVLGLSAA------LVGLLLALYFLAALLGAPLWPRLAK 289
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785 104 RYGRKPIILLGTISIAIFNALFGLS--SNFWMAIGTRFLLG----SFNCLLGTMKA----YASEIFRDEYQATAMSAVST 173
Cdd:COG2211 290 RFGKKKAFIIGLLLAALGLLLLFFLgpGNLWLLLVLAALAGiglgAILVLPWAMLAdvvdYDEWKTGRRREGLYFGIFTF 369
                       170       180       190       200       210       220
                ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 22326785 174 AWGIGLIIGPALGGFLAQPADKYPNVFSQESLFGRFRYALpCFTISAFALLVTVLCCFIPETLHNHK 240
Cdd:COG2211 370 AIKLGQALAGALAGLLLALFGYVAGAAQSPSALTGIRLLF-FLLPAVLLLLAALLLLFYPLTRERHA 435
MFS_OAT cd17374
Organic anion transporters of the Major Facilitator Superfamily of transporters; Organic anion ...
87-185 1.27e-06

Organic anion transporters of the Major Facilitator Superfamily of transporters; Organic anion transporters (OATs) generally display broad substrate specificity and they facilitate the exchange of extracellular with intracellular organic anions (OAs). Several OATs have been characterized including OAT1-10 and urate anion exchanger 1 (URAT1, also called SLC22A12). Many OATs occur in renal proximal tubules, the site of active drug secretion. OATs mediate the absorption, distribution, and excretion of a diverse array of environmental toxins, and clinically important drugs, including anti-HIV therapeutics, anti-tumor drugs, antibiotics, anti-hypertensives, and anti-inflammatories, and therefore is critical for the survival of the mammalian species. OAT falls into the SLC22 (solute carrier 22) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340932 [Multi-domain]  Cd Length: 341  Bit Score: 50.37  E-value: 1.27e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785  87 FMLGRALTSVFWGIVADRYGRKPIILLGTISIAIFNALFGLSSNFWMAIGTRFLLGSF-------NCLLGTmkayasEIF 159
Cdd:cd17374  44 FMAGLLVGALIFGHLSDRFGRKFILLLSLLQLAIFGTCAAFAPTFPVYCVLRFLAGFAvsgisinTLILGT------EWT 117
                        90       100
                ....*....|....*....|....*.
gi 22326785 160 RDEYQATAMSAVSTAWGIGLIIGPAL 185
Cdd:cd17374 118 TPRHRALAITLTSCFFSIGQMLLAGL 143
efflux_Bcr_CflA TIGR00710
drug resistance transporter, Bcr/CflA subfamily; This subfamily of drug efflux proteins, a ...
86-189 1.54e-06

drug resistance transporter, Bcr/CflA subfamily; This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.


Pssm-ID: 273229 [Multi-domain]  Cd Length: 385  Bit Score: 50.07  E-value: 1.54e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785    86 SFMLGRALTSVFWGIVADRYGRKPIILLGTISIAIFNALFGLSSNFWMAIGTRFLLGSFNCL-LGTMKAYASEIFRDEYQ 164
Cdd:TIGR00710  48 LYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGLALSNNIETLLVLRFVQAFGASAgSVISQALVRDIYPGEEL 127
                          90       100
                  ....*....|....*....|....*
gi 22326785   165 ATAMSAVSTAWGIGLIIGPALGGFL 189
Cdd:TIGR00710 128 SRIYSILMPVLALAPAVAPLLGGYI 152
2A0104 TIGR00881
phosphoglycerate transporter family protein; [Transport and binding proteins, Carbohydrates, ...
62-267 1.61e-06

phosphoglycerate transporter family protein; [Transport and binding proteins, Carbohydrates, organic alcohols, and acids]


Pssm-ID: 273319 [Multi-domain]  Cd Length: 379  Bit Score: 50.07  E-value: 1.61e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785    62 YMIEDFGVAKTEkdigfyAGFVGCSFMLGRALTSVFWGIVADRYGRKPIILLGTISIAIFNALFGLSSNFWMAIGTRFLL 141
Cdd:TIGR00881  20 YLVEEIGLSKTD------LGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFSTSLWVMAALWALN 93
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785   142 GSFN-----CLLGTMKAYASEIFRdeyqATAMSAVSTAWGIGLIIGPALGGFLAqpadkypnvfsQESLFGRFRYALPcf 216
Cdd:TIGR00881  94 GIFQgmgwpPCGRTVTKWFSRSER----GTWVSFWNCSHNVGGGLLPPLVLFGI-----------AELYSWHWVFIVP-- 156
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 22326785   217 tiSAFALLVTVLCCFI----PETLHNHKLDSLSHDDSYDILEAASHESSPSTGKA 267
Cdd:TIGR00881 157 --GIIAIIVSLICFLLlrdsPQSCGLPPAEEMPNEEPDGDAEKKEEELTKKQIFL 209
MFS_FucP_MFSD4_like cd17333
Bacterial fucose permease, eukaryotic Major facilitator superfamily domain-containing protein ...
42-254 1.62e-06

Bacterial fucose permease, eukaryotic Major facilitator superfamily domain-containing protein 4, and similar proteins; This family is composed of bacterial L-fucose permease (FucP), eukaryotic Major facilitator superfamily domain-containing protein 4 (MFSD4) proteins, and similar proteins. L-fucose permease facilitates the uptake of L-fucose across the boundary membrane with the concomitant transport of protons into the cell; it can also transport L-galactose and D-arabinose. The MFSD4 subfamily consists of two vertebrate members: MFSD4A and MFSD4B. The function of MFSD4A is unknown. MFSD4B is more commonly know as Sodium-dependent glucose transporter 1 (NaGLT1), a primary fructose transporter in rat renal brush-border membranes that also facilitates sodium-independent urea uptake. The FucP/MFSD4 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340891 [Multi-domain]  Cd Length: 372  Bit Score: 50.01  E-value: 1.62e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785  42 VWIIVLSTSLPISSLYPFLYYMIEDFGVAKTEkdigfyAGFVGCSFMLGRALTSVFWGIVADRYGRKPIILLGTISIAIF 121
Cdd:cd17333   1 LYISFFSNGLTDALLGILGPSLEEAFNLNVAD------VSVIFSSQNAGYLIGSLLAGFLMKRLGRRRTLILGLLLISLA 74
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785 122 NALFGLSSNFWMAIGTRFLLGSFN-CLLGTMKAYASEIFrDEYQATAMSAVSTAWGIGLIIGPALGGFLAQPAdkypnvf 200
Cdd:cd17333  75 LALIFATPSIYLFVVLMFLAGLGAgILDTGANTFVGALF-EESSATRLNVLHGFFGLGALIGPLIATSLLTSE------- 146
                       170       180       190       200       210
                ....*....|....*....|....*....|....*....|....*....|....
gi 22326785 201 sqeslfGRFRYALPCFTISAFALLVTVLCCFIPETLHNHKLDSLSHDDSYDILE 254
Cdd:cd17333 147 ------LSWSWAYLIIGLIYLLLAILILLTLFPELPSARNPQQSVGAFSASASR 194
PRK12307 PRK12307
MFS transporter;
56-181 1.91e-06

MFS transporter;


Pssm-ID: 237051 [Multi-domain]  Cd Length: 426  Bit Score: 49.93  E-value: 1.91e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785   56 LYPFLYYMIEDFGVAKTEkdigfyAGFVGCSFMLGRALTSVFWGIVADRYGRKPIILLGTISIAIFNALFGLSSNFWMAI 135
Cdd:PRK12307  37 IFYIMYLIKADLGLTDME------GAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAYSVGTGLSGLASGVIMLT 110
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*..
gi 22326785  136 GTRFLLG-SFNCLLGTMKAYASEIFRDEYQATAMSAVSTAWGIGLII 181
Cdd:PRK12307 111 LSRFIVGmGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNII 157
MelB COG2211
Na+/melibiose symporter or related transporter [Carbohydrate transport and metabolism];
59-232 2.25e-06

Na+/melibiose symporter or related transporter [Carbohydrate transport and metabolism];


Pssm-ID: 441813 [Multi-domain]  Cd Length: 447  Bit Score: 49.90  E-value: 2.25e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785  59 FLYYMIEDFGVAktekdigfyAGFVGCSFMLGR---ALTSVFWGIVADRYG-----RKPIILLGTISIAIFNAL------ 124
Cdd:COG2211  33 LLYFYTDVLGLS---------AALVGLILLVARlwdAITDPLIGALSDRTRtrwgrRRPWILIGAIPLALSFVLlftapd 103
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785 125 FGLSSNFWMAIGTRFLLG-SFNCLLGTMKAYASEIFRDEYQATAMSAVSTAWG-IGLIIGPALGGFLAqpadkypNVFSQ 202
Cdd:COG2211 104 LSPTGKLIYALVTYLLLGlAYTLVNIPYSALGAELTPDYEERTRLSSWRFAFAgLGGLLASVLPPPLV-------AAFGG 176
                       170       180       190
                ....*....|....*....|....*....|
gi 22326785 203 ESLFGrFRYAlpcFTISAFALLVTVLCCFI 232
Cdd:COG2211 177 DAALG-YRLT---ALIFAVLGLLAFLLTFF 202
MFS_GLUT_like cd17315
Glucose transporters (GLUTs) and other similar sugar transporters of the Major Facilitator ...
79-142 2.77e-06

Glucose transporters (GLUTs) and other similar sugar transporters of the Major Facilitator Superfamily; This family is composed of glucose transporters (GLUTs) and other sugar transporters including fungal hexose transporters (HXT), bacterial xylose transporter (XylE), plant sugar transport proteins (STP) and polyol transporters (PLT), H(+)-myo-inositol cotransporter (HMIT), and similar proteins. GLUTs, also called Solute carrier family 2, facilitated glucose transporters (SLC2A), are a family of proteins that facilitate the transport of hexoses such as glucose and fructose. There are fourteen GLUTs found in humans; they display different substrate specificities and tissue expression. They have been categorized into three classes based on sequence similarity: Class 1 (GLUTs 1-4, 14); Class 2 (GLUTs 5, 7, 9, and 11); and Class 3 (GLUTs 6, 8, 10, 12, and HMIT). GLUT proteins are comprised of about 500 amino acid residues, possess a single N-linked oligosaccharide, and have 12 transmembrane segments. The GLUT-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340873 [Multi-domain]  Cd Length: 365  Bit Score: 49.49  E-value: 2.77e-06
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 22326785  79 YAGFVGCSFMLGRALTSVFWGIVADRYGRKPIILLGTISIAIFNALFGLSSNFWMAIGTRFLLG 142
Cdd:cd17315  35 LQGLVVSSLLLGAAIGSLFGGPLADRFGRRKSLLIAAVLYVIGALLSALAPNVWVLIVGRFLLG 98
MFS_FsR cd17478
Fosmidomycin resistance protein of the Major Facilitator Superfamily of transporters; ...
39-196 2.99e-06

Fosmidomycin resistance protein of the Major Facilitator Superfamily of transporters; Fosmidomycin resistance protein (FsR) confers resistance against fosmidomycin. It shows sequence similarity with the bacterial drug-export proteins that mediate resistance to tetracycline and chloramphenicol. This FsR family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341031 [Multi-domain]  Cd Length: 365  Bit Score: 49.09  E-value: 2.99e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785  39 LSFVWIIVLSTSLPISSLYPFL-YYMIEDFGvaktekdIGFYAGFVGCSFMLGRALTSVFWGIVADRYGRKPIILLGTIS 117
Cdd:cd17478 197 LLLLLIIVFLRSWVLSSLTTFLpFYLVQRGY-------SLVFAGLLLSLFLFAGAIGTLIGGPLSDRFGRRRVIIASLLL 269
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785 118 IAIFNALFGLSSNFWMAIGTrFLLGSFNCL-LGTMKAYASEIFRdEYQATAmSAVST--AWGIGLIIGPALGGFlaqpAD 194
Cdd:cd17478 270 AAPFLLLFLLTPGIWSYILL-VLAGFLLFAsFPVTVVLAQELLP-GNVGLA-SGLMMglSFGLGGIGAPVLGAL----AD 342

                ..
gi 22326785 195 KY 196
Cdd:cd17478 343 AF 344
MFS_PcaK_like cd17365
4-hydroxybenzoate transporter PcaK and similar transporters of the Major Facilitator ...
63-190 5.51e-06

4-hydroxybenzoate transporter PcaK and similar transporters of the Major Facilitator Superfamily; This aromatic acid:H(+) symporter subfamily includes Acinetobacter sp. 4-hydroxybenzoate transporter PcaK, Pseudomonas putida gallate transporter (GalT), Corynebacterium glutamicum gentisate transporter (GenK), Nocardioides sp. 1-hydroxy-2-naphthoate transporter (PhdT), Escherichia coli 3-(3-hydroxy-phenyl)propionate (3HPP) transporter (MhpT), and similar proteins. These transporters are involved in the uptake across the cytoplasmic membrane of specific aromatic compounds such as 4-hydroxybenzoate, gallate, gentisate (2,5-dihydroxybenzoate), 1-hydroxy-2-naphthoate, and 3HPP, respectively. The PcaK-like aromatic acid:H(+) symporter subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340923 [Multi-domain]  Cd Length: 351  Bit Score: 48.35  E-value: 5.51e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785  63 MIEDFGVAKTEkdigfyAGFVGCSFMLGRALTSVFWGIVADRYGRKPIILLGTISIAIFNALFGLSSNFWMAIGTRFLLG 142
Cdd:cd17365  25 LAQDWGLSPAQ------LGPVGSAALFGMAIGALLAGPLADRFGRKRVLLVSVALFGLFTLLTAFAQSVLQLALLRFLTG 98
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|...
gi 22326785 143 -----SFNCLLGTMKAYASEIFRdeyqATAMSAVSTawgiGLIIGPALGGFLA 190
Cdd:cd17365  99 lglgaAMPNAITLVSEYAPARRR----SLAVTLMFC----GYPLGAALGGFLA 143
MFS_PcaK_like cd17365
4-hydroxybenzoate transporter PcaK and similar transporters of the Major Facilitator ...
80-200 5.76e-06

4-hydroxybenzoate transporter PcaK and similar transporters of the Major Facilitator Superfamily; This aromatic acid:H(+) symporter subfamily includes Acinetobacter sp. 4-hydroxybenzoate transporter PcaK, Pseudomonas putida gallate transporter (GalT), Corynebacterium glutamicum gentisate transporter (GenK), Nocardioides sp. 1-hydroxy-2-naphthoate transporter (PhdT), Escherichia coli 3-(3-hydroxy-phenyl)propionate (3HPP) transporter (MhpT), and similar proteins. These transporters are involved in the uptake across the cytoplasmic membrane of specific aromatic compounds such as 4-hydroxybenzoate, gallate, gentisate (2,5-dihydroxybenzoate), 1-hydroxy-2-naphthoate, and 3HPP, respectively. The PcaK-like aromatic acid:H(+) symporter subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340923 [Multi-domain]  Cd Length: 351  Bit Score: 48.35  E-value: 5.76e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785  80 AGFVGCSFMLGRALTSVFWGIVADRYGRKPIILLGTISIAIFNALFGLSSN-FWMAIGTRFLLGSfnCLLGT---MKAYA 155
Cdd:cd17365 208 ALTITLLLNIGGVIGSLLLGWLADRFGPKRVLALFFALGAVSLALLGVSPAsLVLLYVLVFLAGA--CVNGAqvgLYALA 285
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*
gi 22326785 156 SEIFRDEYQATAMSAVSTAWGIGLIIGPALGGFLAQPADKYPNVF 200
Cdd:cd17365 286 ARFYPTEVRATGVGWALGVGRLGAILGPLLGGLLLAAGLGPESVF 330
MFS_YcxA_like cd17355
MFS-type transporter YcxA and similar proteins of the Major Facilitator Superfamily of ...
43-191 6.38e-06

MFS-type transporter YcxA and similar proteins of the Major Facilitator Superfamily of transporters; This group is composed of uncharacterized bacterial MFS-type transporters including Bacillus subtilis YcxA and YbfB. YcxA has been shown to facilitate the export of surfactin in B. subtilis. The YcxA-like group belongs to the Monocarboxylate transporter -like (MCT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340913 [Multi-domain]  Cd Length: 386  Bit Score: 48.42  E-value: 6.38e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785  43 WIIVLSTSL-------PISSLYPFLYYMIEDFGVAKTEKDIGFYAGfvgcsfMLGRALTSVFWGIVADRYGRKPIILLGT 115
Cdd:cd17355   2 WVVLAVTFLililswgIRYYFGVFIIPIIAEFGWSRAVISLAFTVG------LLAFGLAQPFVGRLLDRFGPRRVMLLGL 75
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 22326785 116 ISIAIFNALFGLSSNFWMAIGTRFLLGSFNCLLGTMKAYASEIFR--DEYQATAMSAVSTAWGIGLIIGPALGGFLAQ 191
Cdd:cd17355  76 LLLAAGLVLLALATSLWQLYLLWGLLGGGGAGTLAAVAFATVAAWwfERRRGLALGILTAGGGLGSLVFLPLGAALIE 153
MFS_SLC46_TetA_like cd17330
Eukaryotic Solute carrier 46 (SLC46) family, Bacterial Tetracycline resistance proteins, and ...
39-192 7.05e-06

Eukaryotic Solute carrier 46 (SLC46) family, Bacterial Tetracycline resistance proteins, and similar proteins of the Major Facilitator Superfamily of transporters; This family is composed of the eukaryotic proteins MFSD9, MFSD10, MFSD14, and SLC46 family proteins, as well as bacterial multidrug resistance (MDR) transporters such as tetracycline resistance protein TetA and multidrug resistance protein MdtG. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. TetA proteins confer resistance to tetracycline while MdtG confers resistance to fosfomycin and deoxycholate. The Solute carrier 46 (SLC46) family is composed of three vertebrate members (SLC46A1, SLC46A2, and SLC46A3), the best-studied of which is SLC46A1, which functions both as an intestinal proton-coupled high-affinity folate transporter involved in the absorption of folates and as an intestinal heme transporter which mediates heme uptake. MFSD10 facilitates the uptake of organic anions such as some non-steroidal anti-inflammatory drugs (NSAIDs) and confers resistance to such NSAIDs. The SLC46/TetA-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340888 [Multi-domain]  Cd Length: 349  Bit Score: 47.96  E-value: 7.05e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785  39 LSFVWIIVLSTSLPISSLYP-FLYYMIEDFGvaKTEKDIGFYAGFVGCSFMLGRALtsvFWGIVADRYGRKPIILLGTIS 117
Cdd:cd17330 176 LRRLLLVYFLIALAFAGLESvFSLFLKDRFG--FSPSQIGLLLALVGIAGILAQLL---LIPRLAKRLGERKLLRLGLLL 250
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 22326785 118 IAIFNALFGLSSNF-WMAIGTrFLLGSFNCLLGT-MKAYASEIFRDEYQATAMSAVSTAWGIGLIIGPALGGFLAQP 192
Cdd:cd17330 251 AIIGLLLLPFASSVpLLVLAA-AILAFGTGIVFPaLSALLSKSVPSKEQGKAQGIIQSLQSLARIIGPLLAGPLYSF 326
MFS_YajR_like cd17472
Escherichia coli inner membrane transport protein YajR and similar multidrug-efflux ...
99-189 9.85e-06

Escherichia coli inner membrane transport protein YajR and similar multidrug-efflux transporters of the Major Facilitator Superfamily; This family is composed of Escherichia coli inner membrane transport protein YajR and some uncharacterized multidrug-efflux transporters. YajR is a putative proton-driven major facilitator superfamily (MFS) transporter found in many gram-negative bacteria. Unlike most MFS transporters, YajR contains a C-terminal, cytosolic YAM domain, which may play an essential role for the proper functioning of the transporter. YajR-like transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341025 [Multi-domain]  Cd Length: 371  Bit Score: 47.60  E-value: 9.85e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785  99 GIVADRYGRKPIILLGTISIAIFNALFGLSSNFWMAIGTRFLLGSfNCLLGTMKAYASEIFRDEYQATAMSAVSTAWGI- 177
Cdd:cd17472  53 GLLSDRIGRKPVILFGLLLFIAGSLLAAYATSIYGLILGRALQGS-GAISSVVMALLADLTREENRTKAMALIGASIGIa 131
                        90
                ....*....|....*
gi 22326785 178 ---GLIIGPALGGFL 189
Cdd:cd17472 132 faiSMVLGPLLAAHL 146
MFS_YxlH_like cd17490
Bacillus subtilis YxlH and similar transporters of the Major Facilitator Superfamily; This ...
76-234 1.38e-05

Bacillus subtilis YxlH and similar transporters of the Major Facilitator Superfamily; This subfamily is composed of Bacillus subtilis YxlH uncharacterized MFS-type transporter YxlH and similar proteins. The biological function of YxlH remains unclear. The YxlH-like subfamily belongs to the bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341043 [Multi-domain]  Cd Length: 371  Bit Score: 47.22  E-value: 1.38e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785  76 IGFYAGFVGCSFMLGRALTsvfwGIVADRYG-RKPIILLGTISIAIFNALFGLSSNFWMAIGTRFLLG-------SFNCL 147
Cdd:cd17490  33 IGIILGAYGISQMLLRIPL----GILSDRIGkRKLFIIIGLLFTVLASLIMILFPSPWGLLIARFLSGiaaatwvSFTVL 108
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785 148 lgtmkaYASeIFRDEYQATAMSAVSTAWGIGLIIGPALGGFLAQpadkypnvfsqesLFGrfrYALPCFTISAFALLVTV 227
Cdd:cd17490 109 ------YAS-YFPPDEAAKAMGLINLVNNLGQLIAFLIGGLIAE-------------HFG---MRAPFLLAALAGVLGFI 165

                ....*..
gi 22326785 228 LCCFIPE 234
Cdd:cd17490 166 LSLFIKE 172
2A0115 TIGR00895
benzoate transport; [Transport and binding proteins, Carbohydrates, organic alcohols, and ...
80-190 1.52e-05

benzoate transport; [Transport and binding proteins, Carbohydrates, organic alcohols, and acids]


Pssm-ID: 273327 [Multi-domain]  Cd Length: 398  Bit Score: 46.97  E-value: 1.52e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785    80 AGFVGCSFMLGRALTSVFWGIVADRYGRKPIILLGTISIAIFNALFGLSSNFWMAIGTRFLLGSF-NCLLGTMKAYASEI 158
Cdd:TIGR00895 287 AATGGALFNFGGVIGSIIFGWLADRLGPRVTALLLLLGAVFAVLVGSTLFSPTLLLLLGAIAGFFvNGGQSGLYALMALF 366
                          90       100       110
                  ....*....|....*....|....*....|....*
gi 22326785   159 FRDEYQATamsAVSTAWGIG---LIIGPALGGFLA 190
Cdd:TIGR00895 367 YPTAIRAT---GVGWAIGIGrlgAIIGPILAGYLL 398
MFS_SLC46 cd17386
Solute carrier 46 (SLC46) family of the Major Facilitator Superfamily of transporters; The ...
92-189 1.57e-05

Solute carrier 46 (SLC46) family of the Major Facilitator Superfamily of transporters; The solute carrier 46 (SLC46) family is composed of three vertebrate members (SLC46A1, SLC46A2, and SLC46A3) and similar proteins from insects and nematodes. The best-studied member is SLC46A1, also called proton-coupled folate transporter (PCFT), which functions both as an intestinal proton-coupled high-affinity folate transporter involved in the absorption of folates and as an intestinal heme transporter which mediates heme uptake. SLC46A2, also called thymic stromal cotransporter protein (TSCOT), is a putative 12-transmembrane protein mainly expressed in the thymic cortex in a specific thymic epithelial cell (TEC) subpopulation. SLC46A3 is a lysosomal membrane protein that functions as a direct transporter of noncleavable antibody maytansine-based catabolites from the lysosome to the cytoplasm. The SLC46 family belongs to the Eukaryotic Solute carrier 46 (SLC46)/Bacterial Tetracycline resistance (TetA) -like (SLC46/TetA-like) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340944 [Multi-domain]  Cd Length: 360  Bit Score: 46.89  E-value: 1.57e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785  92 ALTSVFWGIVADRYGRKPIILLGTIS------IAIFNALFGLSSNFWMAIGTRF---LLGSFNCLLGTMKAYASEIFRDE 162
Cdd:cd17386  44 LFSSLFLGSWSDRYGRKPPLLMSLVGlllsslILVLIVYFTTVPSVWWFYLSAIplaLFGGFTAFLSASFAYISDISSEK 123
                        90       100
                ....*....|....*....|....*..
gi 22326785 163 YQATAMSAVSTAWGIGLIIGPALGGFL 189
Cdd:cd17386 124 KRTYRMAILEVALGLGGFLGSLLSGHL 150
MFS_MFSD8 cd17326
Major facilitator superfamily domain-containing protein 8; Major facilitator superfamily (MFS) ...
81-190 2.05e-05

Major facilitator superfamily domain-containing protein 8; Major facilitator superfamily (MFS) domain-containing protein 8 (MFSD8) is also called ceroid-lipofuscinosis neuronal protein 7 (CLN7). It is a polytopic lysosomal membrane protein that may transport small solutes by using chemiosmotic ion gradients. Mutations in MFSD8/CLN7 cause a variant of late-infantile neuronal ceroid lipofuscinoses (vLINCL), a neurodegenerative lysosomal storage disorder. Some variants are associated with nonsyndromic autosomal recessive macular dystrophy. MFSD8/CLN7 belongs to the Eukaryotic Solute carrier 46 (SLC46)/Bacterial Tetracycline resistance -like (SLC46/TetA-like) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340884 [Multi-domain]  Cd Length: 374  Bit Score: 46.82  E-value: 2.05e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785  81 GFVGCSFMLGRALTSVFWGIVADRYG-RKPIILLGTISIAIFNALFGLSSNF------WMAIGtRFLLGSFNCLLGTMKA 153
Cdd:cd17326  39 GWVVAAYSLGQLVFSPVFGYWSNKTSsVKEPLIVSILIAIVGNILYALAEYFpsnrkyVMLVA-RFLIGVGAGNVAVLRA 117
                        90       100       110
                ....*....|....*....|....*....|....*..
gi 22326785 154 YASEIFRDEYQATAMSAVSTAWGIGLIIGPALGGFLA 190
Cdd:cd17326 118 YVAAASTLKDRTRAMAVISAAQALGFIVGPALQAAFT 154
MFS_SLC18B1 cd17385
Solute carrier family 18 member B1 of the Major Facilitator Superfamily of transporters; ...
80-189 2.90e-05

Solute carrier family 18 member B1 of the Major Facilitator Superfamily of transporters; Solute carrier family 18 member B1 (SLC18B1) is the fourth member of the SLC18 transporter family, which includes vesicular monoamine transporters and vesicular acetylcholine transporter. It is predominantly expressed in the hippocampus and is associated with vesicles in astrocytes. It actively transports spermine and spermidine by exchange of H(+), and has been suggested to be a vesicular polyamine transporter (VPAT). SLC18B1 belongs to the bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340943 [Multi-domain]  Cd Length: 390  Bit Score: 46.06  E-value: 2.90e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785  80 AGFVGCSFMLG---RALTSVFWGIVADRYG-RKPIILLGTISIAIFNALFG------LSSNFWMAIGTRFLLG------- 142
Cdd:cd17385 235 PGQVGLMFLILagsYAISAPLWGWLSDKKKiPKWLMVIGSIITGVGFLLLGpapllpIKSELWMVIIGLVLLGlslgaal 314
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|.
gi 22326785 143 --SFNCLLGTMKAYAseiFRDEYQATAM-SAV-STAWGIGLIIGPALGGFL 189
Cdd:cd17385 315 vpTFPELLNCAREYG---FPDNLSTYGLvSGLfNAAFSLGAFIGPTLGGFL 362
MFS_OFA_like cd17353
Oxalate:formate antiporter (OFA) and similar proteins of the Major Facilitator Superfamily of ...
88-191 2.98e-05

Oxalate:formate antiporter (OFA) and similar proteins of the Major Facilitator Superfamily of transporters; This subfamily is composed of Oxalobacter formigenes oxalate:formate antiporter (OFA or OxlT) and similar proteins. O. formigenes, a commensal found in the gut of animals and humans, plays an important role in clearing dietary oxalate from the intestinal tract, which is carried out by OFA/OxlT, an anion transporter that facilitates the exchange of divalent oxalate with monovalent formate, the product of oxalate decarboxylation. This exchange generates an electrochemical proton gradient and is the source of energy for ATP synthesis in this cell. The OFA-like subfamily belongs to the Monocarboxylate transporter -like (MCT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340911 [Multi-domain]  Cd Length: 389  Bit Score: 46.06  E-value: 2.98e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785  88 MLGRaltsVFWGIVADRYGRKP--IILLGTISIAIFNALFGLSSNFWMAIGTRFLLGSFNCLLGTMKAYASEIFRDEYQA 165
Cdd:cd17353 263 GGGR----PFWGWLSDKIGRKNtlSIAFLIQGVAMFLLPFIGSVAVLFVLGVALIGFCYGGGFALFPALTADFFGTKNAG 338
                        90       100
                ....*....|....*....|....*.
gi 22326785 166 TAMSAVSTAWGIGLIIGPALGGFLAQ 191
Cdd:cd17353 339 TNYGLLYTAKGVGGLIGPIIAAYVLY 364
MFS_GLUT_Class1_2_like cd17357
Class 1 and Class 2 Glucose transporters (GLUTs) of the Major Facilitator Superfamily; This ...
81-235 3.04e-05

Class 1 and Class 2 Glucose transporters (GLUTs) of the Major Facilitator Superfamily; This subfamily includes Class 1 and Class 2 glucose transporters (GLUTs) including Solute carrier family 2, facilitated glucose transporter member 1 (SLC2A1, also called glucose transporter type 1 or GLUT1), SLC2A2-5 (GLUT2-5), SLC2A7 (GLUT7), SLC2A9 (GLUT9), SLC2A11 (GLUT11), SLC2A14 (GLUT14), and similar proteins. GLUTs are a family of proteins that facilitate the transport of hexoses such as glucose and fructose. There are fourteen GLUTs found in humans; they display different substrate specificities and tissue expression. They have been categorized into three classes based on sequence similarity: Class 1 (GLUTs 1-4, 14); Class 2 (GLUTs 5, 7, 9, and 11); and Class 3 (GLUTs 6, 8, 10, 12, and HMIT). GLUTs 1-5 are the most thoroughly studied and are well-established as glucose and/or fructose transporters in various tissues and cell types. GLUT proteins are comprised of about 500 amino acid residues, possess a single N-linked oligosaccharide, and have 12 transmembrane segments. They belong to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340915 [Multi-domain]  Cd Length: 447  Bit Score: 46.49  E-value: 3.04e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785  81 GFVGCSFMLGRALTSVFWGIVADRYGRKPIILLGTIsIAIFNALFGLSSNFW----MAIGTRFLLG-SFNCLLGTMKAYA 155
Cdd:cd17357  52 SLIVSIFFIGGAIGSFISAFLANRFGRKNGLLISNA-LLVVSSLLMFLSKSAkspeLLIFGRFLVGiACGLSTGFVPMYL 130
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785 156 SEIFRDEYQatamSAVSTAWGIGLIIGPALGGFLAQpadkyPNVFSQESLfgrFRYALpcFTISAFALLVTVLCCFIPET 235
Cdd:cd17357 131 QEISPSELR----GALGSLTQIGVTLGILLGQVFGL-----PSVLGTETL---WPYLL--FFPGIPALLQLAALPFFPES 196
MFS_SLC22A7_OAT2 cd17447
Solute carrier family 22 member 7 (also called Organic anion transporter 2) of the Major ...
87-143 5.41e-05

Solute carrier family 22 member 7 (also called Organic anion transporter 2) of the Major Facilitator Superfamily of transporters; Solute carrier family 22 member 7 (SLC22A7), also called organic anion transporter 2 (OAT2) mediates sodium-independent transport of a variety of organic anions including prostaglandin E2, prostaglandin F2, tetracycline, bumetanide, estrone sulfate, glutarate, dehydroepiandrosterone sulfate, allopurinol, 5-fluorouracil, paclitaxel, L-ascorbic acid, salicylate, ethotrexate, and alpha-ketoglutarate. It also plays a role in renal uric acid uptake from blood as a first step of tubular secretion. OAT2 belongs to the Solute carrier 22 (SLC22) family of organic cation/anion/zwitterion transporters of the Major Facilitator Superfamily (MFS)of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341005 [Multi-domain]  Cd Length: 341  Bit Score: 45.11  E-value: 5.41e-05
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|....*..
gi 22326785  87 FMLGRALTSVFWGIVADRYGRKPIILLGTISIAIFNALFGLSSNFWMAIGTRFLLGS 143
Cdd:cd17447  44 FFAGVTMGAVAFGYLSDRFGRKRMLLVAYVLSLVFGLASAFSVSYVMFAITRTLTGF 100
MFS_MdtG_MDR_like cd17391
Multidrug resistance protein MdtG and similar multidrug resistance (MDR) transporters of the ...
23-190 6.17e-05

Multidrug resistance protein MdtG and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This subfamily is composed of Escherichia coli multidrug resistance protein MdtG, Streptococcus pneumoniae multidrug resistance efflux pump PmrA, and similar multidrug resistance (MDR) transporters from bacteria. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. MdtG confers resistance to fosfomycin and deoxycholate. PmrA serves as an efflux pump for various substrates and is associated with fluoroquinolone resistance. MdtG-like MDR transporters belong to the bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340949 [Multi-domain]  Cd Length: 380  Bit Score: 45.33  E-value: 6.17e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785  23 KVEQMKQLRRGYPYLELsfVWIIVLSTSLPISSLY---PFLYYMIEDFGVakTEKDIGFYAGFVGCSFMLGRALTSVFWG 99
Cdd:cd17391 186 KMVSTKEVWNSVPNPSL--LISLFVTTFIIQLANQsiePILTLYIRQLMG--DASNLAFISGLVFSATGVSSLLSAPRLG 261
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785 100 IVADRYGRKPIILLGTISIAIFNALFGLSSNFWMAIGTRFLLG-SFNCLLGTMKAYASEIFRDEYQATAMSAVSTAWGIG 178
Cdd:cd17391 262 KLGDRIGHHRILLGALLASALLYIPQAFVQTPWQLGILRFLLGlATGGLLPAINSLLAKITPKEVAGRIFGYNQSFQYLG 341
                       170
                ....*....|..
gi 22326785 179 LIIGPALGGFLA 190
Cdd:cd17391 342 NVAGPLLGSAIA 353
MFS_XylE_like cd17359
D-xylose-proton symporter and similar transporters of the Major Facilitator Superfamily; This ...
81-235 7.36e-05

D-xylose-proton symporter and similar transporters of the Major Facilitator Superfamily; This subfamily includes bacterial transporters such as D-xylose-proton symporter (XylE or XylT), arabinose-proton symporter (AraE), galactose-proton symporter (GalP), major myo-inositol transporter IolT, glucose transport protein, putative metabolite transport proteins YfiG, YncC, and YwtG, and similar proteins. The symporters XylE, AraE, and GalP facilitate the uptake of D-xylose, arabinose, and galactose, respectively, across the boundary membrane with the concomitant transport of protons into the cell. IolT is involved in polyol metabolism and myo-inositol degradation into acetyl-CoA. The XylE-like subfamily belongs to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340917 [Multi-domain]  Cd Length: 383  Bit Score: 44.87  E-value: 7.36e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785  81 GFVGCSFMLGRALTSVFWGIVADRYGRKPIILLGTISIAIFNALFGLSSNFWMAIGTRFLLGsfnclLG------TMKAY 154
Cdd:cd17359  39 GLVVSSALLGAAIGALFAGRLADRFGRRKTLLISAVLFFISALGSAFSPNFTIFIIARIIGG-----LAvggasaLVPMY 113
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785 155 ASEIFRDE--------YQATAMSAVSTAWGIGLIIGPALGGFLaqpadkypnvfsqeSLFGRFRYALPCFTISAFALLvt 226
Cdd:cd17359 114 IAEVAPAEirgrlvslNQLMIVFGQLLAYIVNYLIANAGGADW--------------LGAEGWRWMLGLEAIPAILFL-- 177

                ....*....
gi 22326785 227 VLCCFIPET 235
Cdd:cd17359 178 LGMLFIPES 186
MFS_FsR cd17478
Fosmidomycin resistance protein of the Major Facilitator Superfamily of transporters; ...
54-192 9.98e-05

Fosmidomycin resistance protein of the Major Facilitator Superfamily of transporters; Fosmidomycin resistance protein (FsR) confers resistance against fosmidomycin. It shows sequence similarity with the bacterial drug-export proteins that mediate resistance to tetracycline and chloramphenicol. This FsR family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341031 [Multi-domain]  Cd Length: 365  Bit Score: 44.47  E-value: 9.98e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785  54 SSLYPFLYYMIEDFGVAKTEkdigfyAGFVGCSFMLGRALTSVFWGIVADRYGRKPIILLGTISIAIFNALFGLSSNFWM 133
Cdd:cd17478  13 GFLPALLPLLIAKLGLSYAQ------AGLLVSVFSITSSLLQPLFGYLADRKPRRYLLPLGPLLTGLGLSLLGFAPNYWL 86
                        90       100       110       120       130       140
                ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 22326785 134 AIGTRFLLG----SFNCLLGTMKAYASEifrdEYQATAMSAVSTAWGIGLIIGPALGGFLAQP 192
Cdd:cd17478  87 LLLLVALAGigsaAFHPEGARLASQAAG----GRRGLAMSIFSVGGNLGFALGPLIAAALVAL 145
MFS_YfmO_like cd17474
Bacillus subtilis multidrug efflux protein YfmO and similar transporters of the Major ...
43-190 1.02e-04

Bacillus subtilis multidrug efflux protein YfmO and similar transporters of the Major Facilitator Superfamily; This family is composed of Bacillus subtilis multidrug efflux protein YfmO, bacillibactin exporter YmfD/YmfE, uncharacterized MFS-type transporter YvmA, and similar proteins. YfmO acts to efflux copper or a copper complex, and could contribute to copper resistance. YmfD/YmfE is involved in secretion of bacillibactin. The YfmO-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341027 [Multi-domain]  Cd Length: 374  Bit Score: 44.48  E-value: 1.02e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785  43 WIIVLSTSLPISSLYPFLYYMieDFGVAKTEKDIGFYAGFVGCSFMLGRALTSVFWG-IVADRYGRKPIILLGTISIAIF 121
Cdd:cd17474 201 LTFLVSAFLYFFLYFAFLTYL--PFLLELLYGISPIIIGLLFAGWSVLLALGSLFVGrLLKKRFGARRILVIGLLLYALS 278
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785 122 NALFGLSSNFWMAIGTRFLLG-SFNCLLGTMKAYASEIFRDEYQATAMSAVSTAWGIGLIIGPALGGFLA 190
Cdd:cd17474 279 LLLLGFVPSLALLLIAIVLFGlGLGLNLPLLTTLVTELAPEEERGTASSLYNFVRFLGQAVGPLLFGLLL 348
MFS_ExuT_GudP_like cd17319
Hexuronate transporter, Glucarate transporter, and similar transporters of the Major ...
42-191 1.77e-04

Hexuronate transporter, Glucarate transporter, and similar transporters of the Major Facilitator Superfamily; This family is composed of predominantly bacterial transporters for hexuronate (ExuT), glucarate (GudP), galactarate (GarP), and galactonate (DgoT). They mediate the uptake of these compounds into the cell. They belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340877 [Multi-domain]  Cd Length: 358  Bit Score: 43.71  E-value: 1.77e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785  42 VWIIVLSTSLPISSLYPFLY----YMIEDFGVakTEKDIGFYAGFVgcsFMLGrALTSVFWGIVADRY---GRKPIILLG 114
Cdd:cd17319 181 VWGLALGYFGINYALYGLLTwlptYLKQARGF--SLKQVGLLAAIP---FLAG-AIGMILGGRLSDRLlrgARRLVIIIG 254
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 22326785 115 TISIAIFNALFGLSSNFWMAIGTRFL-LGSFNCLLGTMKAYASEIFRDEYQATAMSAVSTAWGIGLIIGPALGGFLAQ 191
Cdd:cd17319 255 LLLAAVGLLLAYLTTSPVVAVILLSLaGFGIGAASPVFWSLPADLLPGEAAATAGGLINSGGNLGGFVAPLLIGYLVD 332
MFS_MFSD6 cd17335
Major facilitator superfamily domain-containing protein 6; Human Major facilitator superfamily ...
53-146 1.86e-04

Major facilitator superfamily domain-containing protein 6; Human Major facilitator superfamily domain-containing protein 6 (MFSD6) is also called macrophage MHC class I receptor 2 homolog (MMR2). It has been postulated as a possible receptor for human leukocyte antigen (HLA)-B62. MFSD6 is conserved through evolution and appeared before bilateral animals. It belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340893 [Multi-domain]  Cd Length: 375  Bit Score: 43.73  E-value: 1.86e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785  53 ISSLYPFL--YYmiedfgvakteKDIGFYA---GFVGCSFMLGRALTSVFWGIVADRYG-RKPIILLGTISIAIFN-ALF 125
Cdd:cd17335  13 LGSLLPFLsvYL-----------KQLGLSPtqiGILIGIRPFVRFLSAPLWGALADRFGkRKALLLLSLLAAVLFFlSLF 81
                        90       100
                ....*....|....*....|.
gi 22326785 126 GLSSNFWMAIGTRFLLGSFNC 146
Cdd:cd17335  82 FVAQIFWLLLLLVILGAFFSA 102
MFS_SLC22A17_like cd17373
Solute carrier family 22, member 17 and similar proteins of the Major Facilitator Superfamily; ...
86-142 2.29e-04

Solute carrier family 22, member 17 and similar proteins of the Major Facilitator Superfamily; This group is composed of Solute carrier family 22, members 17, 23, and 31. They are members of the SLC22 family of organic cation/anion/zwitterion transporters, which includes organic cation transporters (OCTs/OCTNs) and organic anion transporters (OATs). SLC22A17 functions as a cell surface receptor for lipocalin-2 (LCN2), also called NGAL or 24p3, which plays a key role in iron homeostasis and transport. SLC22A23 and SLC22A31 are orphan members of the SLC22 family. SLC22 transporters interact with a variety of compounds that include drugs of abuse, environmental toxins, opioid analgesics, antidepressant and anxiolytic agents, and neurotransmitters and their metabolites. The SLC22A17-like group belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340931 [Multi-domain]  Cd Length: 348  Bit Score: 43.28  E-value: 2.29e-04
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|....*..
gi 22326785  86 SFMLGRALTSVFWGIVADRYGRKPIILLGTISIAIFNALFGLSSNFWMAIGTRFLLG 142
Cdd:cd17373  33 SLLLGLIFGYLILGCIADRFGRRPVLLFSLILILIFGLTVALAVSVTMFSTLRFLEG 89
MFS_YcaD_like cd17477
YcaD and similar transporters of the Major Facilitator Superfamily; This family is composed of ...
80-188 3.88e-04

YcaD and similar transporters of the Major Facilitator Superfamily; This family is composed of Escherichia coli MFS-type transporter YcaD, Bacillus subtilis MFS-type transporter YfkF, and similar proteins. They are uncharacterized transporters belonging to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341030 [Multi-domain]  Cd Length: 360  Bit Score: 42.55  E-value: 3.88e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785  80 AGFVGCSFMLGRALTSVFWGIVADRYGRKPIILLGTISIAIFNALFGLSSNFWMAIGTRFLLGSFNCLLGT-MKAYASEI 158
Cdd:cd17477  33 IGLVASAYYLGILLGSPLVPRLIRRVGHIRAFAAGAAITAVSVLLLALTDSPWVWFLLRFVMGIGLAGLFVvSESWLNAL 112
                        90       100       110
                ....*....|....*....|....*....|
gi 22326785 159 FRDEYQATAMSAVSTAWGIGLIIGPALGGF 188
Cdd:cd17477 113 ATNENRGRVLGLYSTVLGLGFALGPLLLAL 142
MFS_YajR_like cd17472
Escherichia coli inner membrane transport protein YajR and similar multidrug-efflux ...
88-191 4.10e-04

Escherichia coli inner membrane transport protein YajR and similar multidrug-efflux transporters of the Major Facilitator Superfamily; This family is composed of Escherichia coli inner membrane transport protein YajR and some uncharacterized multidrug-efflux transporters. YajR is a putative proton-driven major facilitator superfamily (MFS) transporter found in many gram-negative bacteria. Unlike most MFS transporters, YajR contains a C-terminal, cytosolic YAM domain, which may play an essential role for the proper functioning of the transporter. YajR-like transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341025 [Multi-domain]  Cd Length: 371  Bit Score: 42.59  E-value: 4.10e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785  88 MLGRALTSVFWGIVADRYGR-KPIILLGTISIAI-FNALFGLSSNFWM-AIGTRFLLGSFNCLLGTMKAYASEIFRDEYQ 164
Cdd:cd17472 239 ILIGFILMVPFVIYAEKKGKmKQVFVSSILLIAVgFLLLLFAATSLWLlIIGLIIFFIGFNLLEALLPSLVSKIAPKEYR 318
                        90       100
                ....*....|....*....|....*..
gi 22326785 165 ATAMSAVSTAWGIGLIIGPALGGFLAQ 191
Cdd:cd17472 319 GTAMGIYNTSQFLGSFLGGALGGLLWG 345
PRK11551 PRK11551
putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
63-194 4.53e-04

putative 3-hydroxyphenylpropionic transporter MhpT; Provisional


Pssm-ID: 236927 [Multi-domain]  Cd Length: 406  Bit Score: 42.64  E-value: 4.53e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785   63 MIEDFGVAKTEKDIGFYAGFVGcsFMLGRALTsvfwGIVADRYGRKPIILLGTISIAIFNALFGLSSNFWMAIGTRFLLG 142
Cdd:PRK11551  41 MAQEFGLDVAQMGWAFSAGILG--LLPGALLG----GRLADRIGRKRILIVSVALFGLFSLATAQAWDFPSLLVARLLTG 114
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|...
gi 22326785  143 -SFNCLLGTMKAYASEIFRDEYQATAMSAVSTAWGIGLIIGPALGGFLAQPAD 194
Cdd:PRK11551 115 vGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAGDAA 167
MFS_SLC22A1_2_3 cd17379
Solute carrier family 22 members 1, 2, and 3 (also called Organic cation transporters 1, 2, ...
99-189 4.92e-04

Solute carrier family 22 members 1, 2, and 3 (also called Organic cation transporters 1, 2, and 3) of the Major Facilitator Superfamily of transporters; This sufamily includes solute carrier family 22 member 1 (SLC22A1, also called organic cation transporter 1 or OCT1), SLC22A2 (or OCT2), SLC22A3 (or OCT3), and similar proteins. OCT1-3 have similar basic functional properties: they are able to translocate a variety of structurally different organic cations in both directions across the plasma membrane; to translocate organic cations independently from sodium, chloride or proton gradients; and to function as electrogenic uniporters for cations or as electroneutral cation exchangers. They show overlapping but distinct substrate and inhibitor specificities, and different tissue expression pattern. In humans, OCT1 is strongly expressed in the liver, OCT2 is highly expressed in the kidney where it is localized at the basolateral membrane of renal proximal tubules, and OCT3 is most strongly expressed in skeletal muscle. OCTs are broad-specificity transporters that play a critical role in the excretion and distribution of endogeneous organic cations and for the uptake, elimination and distribution of cationic drugs, toxins, and environmental waste products. The SLC22A1-3 subfamily belongs to the Solute carrier 22 (SLC22) family of organic cation/anion/zwitterion transporters of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340937 [Multi-domain]  Cd Length: 340  Bit Score: 42.34  E-value: 4.92e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785  99 GIVADRYGRKPIILLGTISIAIFNALFGLSSNFWMAIGTRFLLGSFNclLGT-MKAYA--SEIFRDEYQATAMSAVSTAW 175
Cdd:cd17379  54 GYLADRFGRKVCFLISILGNGVSGVLMAFSPNYPWFLIFRFLQGLFG--KGGwMTGYVlvTEFVGSKYRRTVGIVYQMFF 131
                        90
                ....*....|....
gi 22326785 176 GIGLIIGPALGGFL 189
Cdd:cd17379 132 TLGLLILPGIAYFI 145
synapt_SV2 TIGR01299
synaptic vesicle protein SV2; This model describes a tightly conserved subfamily of the larger ...
80-185 6.81e-04

synaptic vesicle protein SV2; This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.


Pssm-ID: 130366 [Multi-domain]  Cd Length: 742  Bit Score: 42.27  E-value: 6.81e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785    80 AGFVGCSFMLGRALTSVFWGIVADRYGRKPIILlgtISIAIfNALFGLSSNFWMAIGT----RFLLG-SFNCLLGTMKAY 154
Cdd:TIGR01299 204 KGMLGLIVYLGMMVGAFFWGGLADKLGRKQCLL---ICLSV-NGFFAFFSSFVQGYGFflfcRLLSGfGIGGAIPIVFSY 279
                          90       100       110
                  ....*....|....*....|....*....|.
gi 22326785   155 ASEIFRDEYQATAMSAVSTAWGIGLIIGPAL 185
Cdd:TIGR01299 280 FAEFLAQEKRGEHLSWLCMFWMIGGIYAAAM 310
MFS_OCT_plant cd17378
Plant organic cation/carnitine transporters of the Major Facilitator Superfamily of ...
78-150 7.12e-04

Plant organic cation/carnitine transporters of the Major Facilitator Superfamily of transporters; Plant organic cation/carnitine transporters (OCTs) are sequence-similar to their animal counterparts, which are broad-specificity transporters that play a critical role in the excretion and distribution of endogeneous organic cations and for the uptake, elimination and distribution of cationic drugs, toxins, and environmental waste products. Little is know about plant OCTs. In Arabidopsis, there are six genes belonging to this family that show distinct, organ-specific expression pattern of the individual genes. AtOCT1 has been found to affect root development and carnitine-related responses in Arabidopsis. AtOCT4, 5 and 6 are up-regulated during drought stress, AtOCT3 and 5 during cold stress and AtOCT5 and 6 during salt stress treatments. Plant OCTs belongs to the Solute carrier 22 (SLC22) family of organic cation/anion/zwitterion transporters of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340936 [Multi-domain]  Cd Length: 342  Bit Score: 41.58  E-value: 7.12e-04
                        10        20        30        40        50        60        70
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 22326785  78 FYAGFVGCSFMLGRALTSVFWGIVAD-RYGRKPIILLGTISIAIFNALFGLSSNFWMAIGTRFLLGSFNCLLGT 150
Cdd:cd17378  33 FLVGLPQSSFFVGCLIGSGVLGHLADsSLGRKNLLFLSCLLMALSGIATAFSPNYWVYAFLRFLTGFGRSGIGT 106
PRK10473 PRK10473
MdtL family multidrug efflux MFS transporter;
87-245 7.32e-04

MdtL family multidrug efflux MFS transporter;


Pssm-ID: 182486 [Multi-domain]  Cd Length: 392  Bit Score: 41.93  E-value: 7.32e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785   87 FMLGRALTSVFWGIVADRYGRKPIILLGTISIAIFNALFGLSSNfwmaiGTRFLLGSFNCLLGTMKAY--ASEIFRD--- 161
Cdd:PRK10473  47 YLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLCSLAET-----SSLFLAGRFLQGIGAGCCYvvAFAILRDtld 121
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785  162 -EYQATAMSAVSTAWGIGLIIGPALGGFLAQpadKYPnvfsQESLFgrfryalpcFTISAFALLVTVLCCFI-PETLHNH 239
Cdd:PRK10473 122 dRRRAKVLSLLNGITCIIPVLAPVLGHLIML---KFP----WQSLF---------YTMAAMGILVLLLSLFIlKETRPAR 185

                 ....*.
gi 22326785  240 KLDSLS 245
Cdd:PRK10473 186 APAASS 191
MFS_YdiM_like cd17396
Inner membrane transport protein YdiM and similar proteins of the Major Facilitator ...
82-150 9.52e-04

Inner membrane transport protein YdiM and similar proteins of the Major Facilitator Superfamily of transporters; This subfamily contains Escherichia coli inner membrane transport proteins YdiM and YdiN, which belong to the bacterial fucose permease, eukaryotic Major facilitator superfamily domain-containing protein 4 (FucP/MFSD4) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340954 [Multi-domain]  Cd Length: 384  Bit Score: 41.56  E-value: 9.52e-04
                        10        20        30        40        50        60        70
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 22326785  82 FVGCSFMLGRALTSVFWGIVADRYGRKPIILLGTISIAIFnaLFG--LSSNFWMAIGTRFLLGSFNCLLGT 150
Cdd:cd17396  39 YVISGIGIGRLLTILFAGVLSDKFGRKPSVLLGMVLYALF--FVGilFSPNLIIAYVFALLAGAANSFLDT 107
MFS_STP cd17361
Plant Sugar transport protein subfamily of the Major Facilitator Superfamily of transporters; ...
86-235 9.85e-04

Plant Sugar transport protein subfamily of the Major Facilitator Superfamily of transporters; The plant Sugar transport protein (STP) subfamily includes STP1-STP14; they are also called hexose transporters. They mediate the active uptake of hexoses such as glucose, 3-O-methylglucose, fructose, xylose, mannose, galactose, fucose, 2-deoxyglucose and arabinose, by sugar/hydrogen symport. Several STP family transporters are expressed in a tissue-specific manner, or at specific developmental stages. STP1 is the member with the highest expression level of all members and high expression is detected in photosynthetic tissues, such as leaves and stems, while roots, siliques, and flowers show lower expression levels. It plays a major role in the uptake and response of Arabidopsis seeds and seedlings to sugars. The STP subfamily belongs to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340919 [Multi-domain]  Cd Length: 390  Bit Score: 41.47  E-value: 9.85e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785  86 SFMLGRALTSVFWGIVADRYGRKPIILLGTISIAIFNALFGLSSNFWMAIGTRFLLG---SFNCLLGTMkaYASEIFRDE 162
Cdd:cd17361  59 SLYLAGLVASLLASYVTRKWGRKPSMLIGGVLFLVGAALNAAAQNIAMLIVGRILLGfgvGFGNQAVPL--YLSEMAPAK 136
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 22326785 163 YQATAMSAVSTAWGIGLIIGPALggflaqpadkypNVFSQESLFGRFRYALPCFTISafALLVTVLCCFIPET 235
Cdd:cd17361 137 LRGALNIGFQLAITIGILIANLI------------NYGTSKIKPNGWRLSLGLAAVP--ALILLLGSLFLPET 195
MFS_SLC18B1 cd17385
Solute carrier family 18 member B1 of the Major Facilitator Superfamily of transporters; ...
53-232 9.98e-04

Solute carrier family 18 member B1 of the Major Facilitator Superfamily of transporters; Solute carrier family 18 member B1 (SLC18B1) is the fourth member of the SLC18 transporter family, which includes vesicular monoamine transporters and vesicular acetylcholine transporter. It is predominantly expressed in the hippocampus and is associated with vesicles in astrocytes. It actively transports spermine and spermidine by exchange of H(+), and has been suggested to be a vesicular polyamine transporter (VPAT). SLC18B1 belongs to the bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340943 [Multi-domain]  Cd Length: 390  Bit Score: 41.43  E-value: 9.98e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785  53 ISSLYPFLYYMIEDFGVAKTEkdigfyAGFV-GCsFMLGRALTSVFWGIVADRYGRKPIILLGTISIAIFNALFGL---S 128
Cdd:cd17385  15 YSILAPFFPREAEKKGVSDTI------IGLVfGC-FALVIFLTSPIFGKYLVKIGAKFMFVAGMFVSGGCTILFGFldrV 87
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785 129 SNFWMAIGTRFLLGSFNCLLGTMK-----AYASEIFRDEYqATAMSAVSTAWGIGLIIGPALGGFLAQpadkypnvfsqe 203
Cdd:cd17385  88 PDGTVFIALCFLVRIVEAVGFAAFitasfAIIAKEFPNNI-ATVLGTLETFSGLGLMLGPPLGGFLYQ------------ 154
                       170       180
                ....*....|....*....|....*....
gi 22326785 204 sLFGrfrYALPCFTISAFALLVTVLCCFI 232
Cdd:cd17385 155 -AGG---YELPFLVLGCLLLLTVPLNMFI 179
MFS_SLC45_SUC cd17313
Solute carrier family 45 and similar sugar transporters of the Major Facilitator Superfamily ...
104-234 1.04e-03

Solute carrier family 45 and similar sugar transporters of the Major Facilitator Superfamily of transporters; This group includes the solute carrier 45 (SLC45) family as well as plant sucrose transporters (SUCs or SUTs) and similar proteins such as Schizosaccharomyces pombe general alpha-glucoside permease. the SLC45 family is composed of four (A1-A4) vertebrate proteins as well as related insect proteins such as Drosophila sucrose transporter SCRT or Slc45-1. Members of this group transport sucrose and other sugars like maltose into the cell, with the concomitant uptake of protons (symport system). Plant sucrose transporters are crucial to carbon partitioning, playing a key role in phloem loading/unloading. They play a key role in loading and unloading of sucrose into the phloem and as a result, they control sucrose distribution throughout the whole plant and drive the osmotic flow system in the phloem. They also play a role in the exchange of sucrose between beneficial symbionts (mycorrhiza and Rhizobium) as well as pathogens such as nematodes and parasitic fungi. There are nine sucrose transporter genes in Arabidopsis and five in rice. Vertebrate SLC45 family proteins have been implicated in the regulation of glucose homoeostasis in the brain (SLC45A1), with skin and hair pigmentation (SLC45A2), and with prostate cancer and myelination (SLC45A3). Mutations in SLC45A2, also called MATP (membrane-associated transporter protein) or melanoma antigen AIM1, cause oculocutaneous albinism type 4 (OCA4), an autosomal recessive disorder of melanin biosynthesis that results in congenital hypopigmentation of ocular and cutaneous tissues. The SLC45 family and related sugar transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340871 [Multi-domain]  Cd Length: 421  Bit Score: 41.46  E-value: 1.04e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785 104 RYG-RKPIILLGTISIAIFNALFGLSSNFWMAIGTR--------------FLLGSFNCLLGTMKAYASEIFRDEYQATAM 168
Cdd:cd17313  64 RIGrRRPFILVGAPLAALGLILIPNAADIGLALGDGprtwalvlfvlgivLLDFAMNVCQGPVRALLPDLVPPEQRSKAN 143
                        90       100       110       120       130       140
                ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 22326785 169 SAVSTAWGIGLIIGPALGGFLaqpadkYPNVFSQESLFGRFRYAlpcFTISAFALLVTVLC--CFIPE 234
Cdd:cd17313 144 GIINFMGGLGGVLGYLLGAIL------WDHNWFGFALGGNLKVP---FYIGAIILLVCVLVtlFFVKE 202
MFS_Set cd17471
Sugar efflux transporter (Set) family of the Major Facilitator Superfamily of transporters; ...
62-200 1.15e-03

Sugar efflux transporter (Set) family of the Major Facilitator Superfamily of transporters; This family is composed of sugar transporters such as Escherichia coli Sugar efflux transporter SetA, SetB, SetC and other sugar transporters. SetA, SetB, and SetC are involved in the efflux of sugars such as lactose, glucose, IPTG, and substituted glucosides or galactosides. They may be involved in the detoxification of non-metabolizable sugar analogs. The Set family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341024 [Multi-domain]  Cd Length: 371  Bit Score: 40.99  E-value: 1.15e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785  62 YMIEDFGVakTEKDIGFYAG---FVGCSFMLGraltsvfWGIVADRYGRKPIILLGTISIAIFNALFGLSSNFWMAIGTR 138
Cdd:cd17471 225 YVTNELGG--SESWVGLLFGlaaALEIPIMLL-------AGLLAKRFGKRRLLLAGFLAGVLFYLGLALATSLWQLIALQ 295
                        90       100       110       120       130       140
                ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 22326785 139 FLLGSFnclLGTMKAYASEIFRD---EYQATAMSAVSTAWGIGLIIGPALGGFLAQPADkYPNVF 200
Cdd:cd17471 296 LLNAIF---IGITAGLGISYFQDlmpGQPGLATTLYSNASRIGSLLGGLLAGVIAQYFG-YRAVF 356
MFS_SLC22A31 cd17443
Solute carrier family 22, member 31 of the Major Facilitator Superfamily; Solute carrier ...
92-229 1.17e-03

Solute carrier family 22, member 31 of the Major Facilitator Superfamily; Solute carrier family 22, member 31 (SLC22A31) is an uncharacterized member of the SLC22 family of transporters, which includes organic cation transporters (OCTs), organic zwitterion/cation transporters (OCTNs), and organic anion transporters (OATs). SLC22 transporters interact with a variety of compounds that include drugs of abuse, environmental toxins, opioid analgesics, antidepressant and anxiolytic agents, and neurotransmitters and their metabolites. SLC22A31 belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341001 [Multi-domain]  Cd Length: 343  Bit Score: 40.91  E-value: 1.17e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785  92 ALTSVFWGIVADRYGRKPIILLGTIsiaifnaLFGLSSNFWMAiGTRFLLGS---FNCLLGTMKAYASEIFRDEYQATAM 168
Cdd:cd17443 216 ALACIFLCLTVDRCGRRGVLLLGTI-------VTGLSSLLLLA-LTQYLHGGlvlVLSVVGLLASHAVSMLSMFFAAEVL 287
                        90       100       110       120       130       140
                ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 22326785 169 SAVSTAWGIGLIIGPALGGFLAQPADkypnvfsqeSLFGRFRYALPCFTISAFALLvTVLC 229
Cdd:cd17443 288 PTVIRGAGLGLIMGAGFLGRAAGPLM---------ELQNKQGYFLHHVVFASFAVL-SVLC 338
MFS_SLC17A9_like cd17380
Solute carrier family 17 member 9 and similar proteins of the Major Facilitator Superfamily of ...
63-189 1.93e-03

Solute carrier family 17 member 9 and similar proteins of the Major Facilitator Superfamily of transporters; This subfamily includes solute carrier family 17 member 9 (SLC17A9) and similar proteins including plant inorganic phosphate transporters (PHT4) that are also probably anion transporters. SLC17A9, also called vesicular nucleotide transporter (VNUT), is involved in vesicular storage and exocytosis of ATP. It facilitates the accumulation of ATP and other nucleotides in secretory vesicles such as adrenal chromaffin granules and synaptic vesicles. It also functions as a lysosomal ATP transporter and regulates cell viability. Plant PHT4 family transporters mediate the transport of inorganic phosphate and may also transport organic anions. The Arabidopsis protein AtPHT4;4 is a chloroplast-localized ascorbate transporter. PHT4 proteins show differential expression that suggests specialized functions. The SLC17A9-like subfamily belongs to the Solute carrier 17 (SLC17) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340938 [Multi-domain]  Cd Length: 361  Bit Score: 40.23  E-value: 1.93e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785  63 MIEDFGVAKTEKdigfyaGFVGCSFMLGRALTSVFWGIVADRYGRKPIILLGTI--SIAIFNALFGLSSNFWMAIGTRFL 140
Cdd:cd17380  25 MAKEFGWSKTDQ------GLVLSSFFWGYALTQVLGGYLADRFGGKKVLLLAVAlwSLATLLTPLLAYSSLPLLILSRIL 98
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|
gi 22326785 141 LGSFNCL-LGTMKAYASEIFRDEYQATAMSAVSTAWGIGLIIGPALGGFL 189
Cdd:cd17380  99 LGLGEGVhFPSMTSLFSRWVPVSERSRAVSIVTAGSYLGTLLGGLIGPLL 148
MFS_SLC22A16_CT2 cd17375
Solute carrier family 22 member 16 (also called Carnitine transporter 2) of the Major ...
87-141 2.49e-03

Solute carrier family 22 member 16 (also called Carnitine transporter 2) of the Major Facilitator Superfamily of transporters; Solute carrier family 22 member 16 (SLC22A16) is also called carnitine transporter 2 (CT2), fly-like putative transporter 2 (FLIPT2), organic cation transporter OKB1, or organic cation/carnitine transporter 6 (OCT6). It is a partially sodium-ion dependent high affinity carnitine transporter. It also transports organic cations such as tetraethylammonium (TEA) and doxorubicin. It is one of several organic cation transporters (OCTs) that falls into the SLC22 (solute carrier 22) family. OCTs are broad-specificity transporters that play a critical role in the excretion and distribution of endogeneous organic cations and for the uptake, elimination and distribution of cationic drugs, toxins, and environmental waste products. SLC22A16 belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340933 [Multi-domain]  Cd Length: 341  Bit Score: 40.12  E-value: 2.49e-03
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|....*
gi 22326785  87 FMLGRALTSVFWGIVADRYGRKPIILLGTISIAIFNALFGLSSNFWMAIGTRFLL 141
Cdd:cd17375  44 FMLGVLLGAVIFGDIADRIGRRPVLWFTSTGQFVFGIAVAFTFDYYSFVIVRFLL 98
MFS_MCT_SLC16 cd17352
Monocarboxylate transporter (MCT) family of the Major Facilitator Superfamily of transporters; ...
41-232 2.65e-03

Monocarboxylate transporter (MCT) family of the Major Facilitator Superfamily of transporters; The animal Monocarboxylate transporter (MCT) family is also called Solute carrier family 16 (SLC16 or SLC16A). It is composed of 14 members, MCT1-14. MCTs play an integral role in cellular metabolism via lactate transport and have been implicated in metabolic synergy in tumors. MCT1-4 are proton-coupled transporters that facilitate the transport across the plasma membrane of monocarboxylates such as lactate, pyruvate, branched-chain oxo acids derived from leucine, valine and isoleucine, and ketone bodies such as acetoacetate, beta-hydroxybutyrate and acetate. MCT8 and MCT10 are transporters which stimulate the cellular uptake of thyroid hormones such as thyroxine (T4), triiodothyronine (T3), reverse triiodothyronine (rT3) and diidothyronine (T2). MCT10 also functions as a sodium-independent transporter that mediates the uptake or efflux of aromatic acids. Many members are orphan transporters whose substrates are yet to be determined. The MCT family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340910 [Multi-domain]  Cd Length: 361  Bit Score: 39.84  E-value: 2.65e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785  41 FVWIIVLSTSLPISSLYPFLYYMI---EDFGVakTEKDIGFYAGFVGCSFMLGRaltsVFWGIVADR--YGRKPIILLGT 115
Cdd:cd17352 184 TFVLLALGVSFAMLGFFVPFVYLPsyaKSLGI--DESDAAFLLSIIGISDIVGR----ILLGLLADKprIGRLYLYIFTL 257
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785 116 ISIAIFNALFGLSSNFWMAIGTRFLLG-SFNCLLGTMKAYASEIFRDEYQATAMSAVSTAWGIGLIIGPALGGFLAQPAD 194
Cdd:cd17352 258 LILGLSLLAFPLATTYVGLIVFSVLFGfCSGSYSSLTPVILADLVGLEKLSNAYGLVLLFQGLAALVGPPIAGLLRDYTG 337
                       170       180       190
                ....*....|....*....|....*....|....*...
gi 22326785 195 KYpnvfsqeslfgrfryaLPCFTISAFALLVTVLCCFI 232
Cdd:cd17352 338 DY----------------DAAFYFCGACLLLSGVLLFL 359
MFS_GLUT10_Class3 cd17436
Glucose transporter type 10 (GLUT10), a Class 3 GLUT, of the Major Facilitator Superfamily of ...
82-200 2.72e-03

Glucose transporter type 10 (GLUT10), a Class 3 GLUT, of the Major Facilitator Superfamily of transporters; Glucose transporter type 10 (GLUT10) is also called Solute carrier family 2, facilitated glucose transporter member 10 (SLC2A10). It is classified as a Class 3 GLUT and is a facilitative glucose transporter that exhibits a wide tissue distribution. It is expressed in pancreas, placenta, heart, lung, liver, brain, fat, muscle, and kidney. GLUT10 facilitates the transport of dehydroascorbic acid (DHA), the oxidized form of vitamin C, into mitochondria, and also increases cellular uptake of DHA, which in turn protects cells against oxidative stress. Loss-of-function mutations in SLC2A10 cause arterial tortuosity syndrome (ATS), an autosomal recessive connective tissue disorder characterized by twisting and lengthening of the major arteries, hypermobility of the joints, and laxity of skin. The GLUT10 subfamily belongs to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340994 [Multi-domain]  Cd Length: 376  Bit Score: 40.17  E-value: 2.72e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785  82 FVGCSFMLGRALTSVFWGIVADRYGRKPIILLGTISIAIFNALFGLSSNFWMAIGTRFLLGsFNCLLGTMKA--YASEIF 159
Cdd:cd17436  40 ALVSALLIGALLASLIGGFLIDRHGRRTSILGSNLVLLAGSLILTLAGSFFWLVIGRAVVG-FAISVSSMACciYVSEMV 118
                        90       100       110       120
                ....*....|....*....|....*....|....*....|.
gi 22326785 160 RDEYQATAMSAVSTAWGIGLIIGPALGGFLAQPADKYPNVF 200
Cdd:cd17436 119 TPHQRGLLVSLYEAGITVGILISYALNYFFSNVLTGWRYMF 159
MFS_GLUT6_8_Class3_like cd17358
Glucose transporter (GLUT) types 6 and 8, Class 3 GLUTs, and similar transporters of the Major ...
80-235 3.25e-03

Glucose transporter (GLUT) types 6 and 8, Class 3 GLUTs, and similar transporters of the Major Facilitator Superfamily; This subfamily is composed of glucose transporter type 6 (GLUT6), GLUT8, plant early dehydration-induced gene ERD6-like proteins, and similar insect proteins including facilitated trehalose transporter Tret1-1. GLUTs, also called Solute carrier family 2, facilitated glucose transporters (SLC2A), are a family of proteins that facilitate the transport of hexoses such as glucose and fructose. There are fourteen GLUTs found in humans; they display different substrate specificities and tissue expression. They have been categorized into three classes based on sequence similarity: Class 1 (GLUTs 1-4, 14); Class 2 (GLUTs 5, 7, 9, and 11); and Class 3 (GLUTs 6, 8, 10, 12, and HMIT). Insect Tret1-1 is a low-capacity facilitative transporter for trehalose that mediates the transport of trehalose synthesized in the fat body and the incorporation of trehalose into other tissues that require a carbon source. GLUT proteins are comprised of about 500 amino acid residues, possess a single N-linked oligosaccharide, and have 12 transmembrane segments. They belong to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340916 [Multi-domain]  Cd Length: 436  Bit Score: 39.87  E-value: 3.25e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785  80 AGFVGCSFMLGRALTSVFWGIVADRYGRKPIILLGTISIAIFNALFGLSSNFWMAIGTRFLLG---SFNCLLGTMkaYAS 156
Cdd:cd17358  43 FSWFGSLLTLGALIGALLSGKLADRIGRKRTLLISAIPCILGWLLIAFAKDVWMLYLGRFLAGfggGAASVVVPV--YIA 120
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 22326785 157 EIFRDEYQATAMSAVSTAWGIGLIIGPALGGFLaqpadkypnvfsqeslfgrfRYALPCFTISAFALLVTVLCCFIPET 235
Cdd:cd17358 121 EIAPKNVRGALGSLNQLLVNIGILLGYVLGSFL--------------------PWRTLALIGAIPPVVFLILLFFIPES 179
MFS_arabinose_efflux_permease_like cd17473
Putative arabinose efflux permease family transporters of the Major Facilitator Superfamily; ...
80-201 3.26e-03

Putative arabinose efflux permease family transporters of the Major Facilitator Superfamily; This family includes a group of putative arabinose efflux permease family transporters, such as alpha proteobacterium quinolone resistance protein NorA (characterized Staphylococcus aureus Quinolone resistance protein NorA belongs to a different group), Desulfovibrio dechloracetivorans bacillibactin exporter, Vibrio aerogenes antiseptic resistance protein. The biological function of those transporters remain unclear. They belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341026 [Multi-domain]  Cd Length: 374  Bit Score: 39.86  E-value: 3.26e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785  80 AGFVGCSFMLGRALTSVFWGIVADRYGRKPIILLGTISIAIFNALFGLSSNFWMAIGTRFLLG-SFNCLLGTMKAYASEI 158
Cdd:cd17473 235 IGLALAIASLAGAIGALLFGRLKRRLGKRRLLAIGFALMALGFLLLALASGLWVVLLGAILAGlGFGLLLPTLNSWAMSL 314
                        90       100       110       120
                ....*....|....*....|....*....|....*....|...
gi 22326785 159 FRDEYQATAMSAVSTAWGIGLIIGPALGGFLAQPADKYPNVFS 201
Cdd:cd17473 315 VPPELRGRAMGIVTSAFFLGQFLSPLVLGPLVNLTGGLSGAFL 357
PRK11663 PRK11663
glucose-6-phosphate receptor/MFS transporter UhpC;
63-133 4.47e-03

glucose-6-phosphate receptor/MFS transporter UhpC;


Pssm-ID: 183266 [Multi-domain]  Cd Length: 434  Bit Score: 39.31  E-value: 4.47e-03
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 22326785   63 MIEDFGVAKTekDIGFyagfVGCSFMLGRALTSVFWGIVADRYGRKPIILLGTISIAIFNALFGLSSNFWM 133
Cdd:PRK11663  49 MLADLGLSRS--DIGL----LATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIATGIINILFGFSSSLWA 113
MFS_MCT_like cd17314
Monocarboxylate transporter (MCT) family and similar transporters of the Major Facilitator ...
87-188 4.68e-03

Monocarboxylate transporter (MCT) family and similar transporters of the Major Facilitator Superfamily; The group is composed of the Monocarboxylate transporter (MCT) family in animals and similar transporters from fungi, plants, archaea, and bacteria. MCT is also called Solute carrier family 16 (SLC16 or SLC16A). It is composed of 14 members, MCT1-14. MCTs play an integral role in cellular metabolism via lactate transport and have been implicated in metabolic synergy in tumors. MCTs have been found to facilitate the transport across the plasma membrane not only of monocarboxylates (MCT1-4), but also thyroid hormones (MCT8/10), and aromatic acids (MCT10). Yeast MCT homologous (Mch) proteins are not involved in the uptake of monocarboxylates; their substrates are not known. The MCT-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340872 [Multi-domain]  Cd Length: 385  Bit Score: 39.32  E-value: 4.68e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785  87 FMLGRALTSVFWGIVADRYGRKPI---ILLGTISIAIFNALFGLSSNFWMAIGTRFLLG-SFNCLLGTMKAYASEIFRDE 162
Cdd:cd17314 251 YGLFNAFGRLLWGIVADFFGGRLStlsILLTILGLGLCAFLFLLKMTPVGLVLTGSLLGfSYGGLFTVYPATVSTVFGTE 330
                        90       100
                ....*....|....*....|....*.
gi 22326785 163 YQATAMSAVSTAWGIGLIIGPALGGF 188
Cdd:cd17314 331 SFATLYGILLFAPAIGSILGPMLGAK 356
MFS_OPA_SLC37 cd17312
Organophosphate:Pi antiporter/Solute Carrier family 37 of the Major Facilitator Superfamily of ...
43-239 4.90e-03

Organophosphate:Pi antiporter/Solute Carrier family 37 of the Major Facilitator Superfamily of transporters; Organophosphate:Pi antiporters (OPA) are integral membrane proteins responsible for the transport of specific organophosphates or sugar phosphates across biological membranes with the simultaneous translocation of inorganic phosphate into the opposite direction. The OPA family is also called solute carrier family 37 (SLC37) in vertebrates. Members include glucose-6-phosphate (Glc6P) transporter (also called translocase or exchanger), glycerol-3-phosphate permease, 2-phosphonopropionate transporter, phosphoglycerate transporter, as well as membrane sensor protein UhpC from Escherichia coli. UhpC is both a sensor and a transport protein; it recognizes external Glc6P and induces transport by UhpT, and it can also transport Glc6P. Vertebrates contain four SLC37 or sugar-phosphate exchange (SPX) proteins: SLC37A1 (SPX1), SLC37A2 (SPX2), SLC37A3 (SPX3), and SLC37AA4 (SPX4). The OPA/SLC37 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340870 [Multi-domain]  Cd Length: 364  Bit Score: 39.18  E-value: 4.90e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785  43 WIIVLSTSLpissLYPFLYYMIEDFGVAKTE--KDIGFYA---GFVGCSFMLGRALTSVFWGIVADRYGRKPIILLGTIS 117
Cdd:cd17312   2 WRIFLGVFL----GYAAYYVCRKNFSVAKPPivEEIGLSKddlGIIGSAFLIAYAVGKFISGFLSDRSNIRRFMSAGLLL 77
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785 118 IAIFNALFGLSSNFWMAIGTRFLLGSFN-----CLLGTMKAYaseiFRDEYQATAMSAVSTAWGIGLIIGPALGGFLAQP 192
Cdd:cd17312  78 SALANIFMGFSTSLWFFAVLWGLNGLFQsmgwpPCVKLLGNW----FSKKERGTVYGIWSTSHNFGGILAPILAASLASY 153
                       170       180       190       200
                ....*....|....*....|....*....|....*....|....*..
gi 22326785 193 ADkypnvfsqeslfgrFRYAlpcFTISAFALLVTVLCCFIpeTLHNH 239
Cdd:cd17312 154 YG--------------WRAA---FLVPGIVGLVVAIILFF--FLRDS 181
MFS_MosC_like cd17393
Membrane protein MosC and similar proteins of the Major Facilitator Superfamily of ...
89-200 7.51e-03

Membrane protein MosC and similar proteins of the Major Facilitator Superfamily of transporters; The gene encoding Sinorhizobium meliloti membrane protein MosC is part of the mos locus, which encodes the biosynthesis of the rhizopine 3-O-methyl-scyllo-inosamine. MosC belongs to the bacterial fucose permease, eukaryotic Major facilitator superfamily domain-containing protein 4 (FucP/MFSD4) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340951 [Multi-domain]  Cd Length: 373  Bit Score: 38.39  E-value: 7.51e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785  89 LGRALTSVFWGIVADRYGRKPIILLGTISIAIFNALFGLSSNFWMAIGTRFLLGSFNCLLGT-MKAYASEIFRDeYQATA 167
Cdd:cd17393  45 VGALVAMPLAGRLVARFGSRRVTRLGALLLLLALLLLGLAPSVPALALALFLFGAANGALDVaMNAQGVAVERA-YGRPI 123
                        90       100       110
                ....*....|....*....|....*....|...
gi 22326785 168 MSAVSTAWGIGLIIGpALGGFLAQPADKYPNVF 200
Cdd:cd17393 124 MSSLHAMWSLGGLAG-ALLGAAAIGAGVSPGVH 155
PRK08633 PRK08633
2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
77-191 7.87e-03

2-acyl-glycerophospho-ethanolamine acyltransferase; Validated


Pssm-ID: 236315 [Multi-domain]  Cd Length: 1146  Bit Score: 39.14  E-value: 7.87e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785    77 GFYAGFVGCSFMLGRALTSVFWGIVADRYGRKPIILLGT---ISIAIFNALFGLSSNFWMAIGTRFLLGSFNCLLGTMKA 153
Cdd:PRK08633   46 VILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKlfeVGLTLLIVLAYYLGWFWLAFAVTFLLGAQSAIYSPAKY 125
                          90       100       110
                  ....*....|....*....|....*....|....*....
gi 22326785   154 -YASEIFRDEYQATAMSAVSTAWGIGLIIGPALGGFLAQ 191
Cdd:PRK08633  126 gIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFE 164
emrD PRK11652
multidrug transporter EmrD;
93-236 8.48e-03

multidrug transporter EmrD;


Pssm-ID: 183259 [Multi-domain]  Cd Length: 394  Bit Score: 38.35  E-value: 8.48e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785   93 LTSVFWGIVADRYGRKPIILLGtISIAIFNALFGLSSNFWmaigTRFLLGSFNCLLGT--MKAYASEIFRDEYQATAM-- 168
Cdd:PRK11652  58 LSQLFYGPLSDRVGRRPVILVG-MSIFILGTLVALFAHSL----TVLIAASAIQGLGTgvGGVMARTLPRDLYEGTQLrh 132
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 22326785  169 --SAVSTAWGIGLIIGPALGGFLAqpadkypnvfsqeSLFG-RFRYALpcftISAFALLVTVLCCF-IPETL 236
Cdd:PRK11652 133 anSLLNMGILVSPLLAPLIGGLLT-------------TLFGwRACYLF----LLLLGAGVTFSMARwMPETR 187
MFS_GLUT_Class1_2_like cd17357
Class 1 and Class 2 Glucose transporters (GLUTs) of the Major Facilitator Superfamily; This ...
44-235 9.52e-03

Class 1 and Class 2 Glucose transporters (GLUTs) of the Major Facilitator Superfamily; This subfamily includes Class 1 and Class 2 glucose transporters (GLUTs) including Solute carrier family 2, facilitated glucose transporter member 1 (SLC2A1, also called glucose transporter type 1 or GLUT1), SLC2A2-5 (GLUT2-5), SLC2A7 (GLUT7), SLC2A9 (GLUT9), SLC2A11 (GLUT11), SLC2A14 (GLUT14), and similar proteins. GLUTs are a family of proteins that facilitate the transport of hexoses such as glucose and fructose. There are fourteen GLUTs found in humans; they display different substrate specificities and tissue expression. They have been categorized into three classes based on sequence similarity: Class 1 (GLUTs 1-4, 14); Class 2 (GLUTs 5, 7, 9, and 11); and Class 3 (GLUTs 6, 8, 10, 12, and HMIT). GLUTs 1-5 are the most thoroughly studied and are well-established as glucose and/or fructose transporters in various tissues and cell types. GLUT proteins are comprised of about 500 amino acid residues, possess a single N-linked oligosaccharide, and have 12 transmembrane segments. They belong to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340915 [Multi-domain]  Cd Length: 447  Bit Score: 38.40  E-value: 9.52e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785  44 IIVLSTSLPISSLYPFLYYMIEDFGVAKTEKDIGFYAGFVGCSFMLGRALTSVFWgivADRYGRKPIILLGTISIAIFN- 122
Cdd:cd17357 262 VLVVSASQQFSGINAIFFYSTFIFENAGFSPQLAEWANLGIGIVNVLSTIVGPFL---IEKVGRRPLLLISLSVCAVALl 338
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22326785 123 ----ALFGLSSNFWMAIG-TRFLLG---SFNCLLGTMKAY-ASEIFRDEYQATAMS-AVSTAWGIGLIIGPAlggflaqp 192
Cdd:cd17357 339 lmsvFLFLSEQNSWMSYGcIVAIFLfifFFAIGLGPIPWFiGAELFPQAPRSAAQSlGSSVNWTSNFIVGMA-------- 410
                       170       180       190       200
                ....*....|....*....|....*....|....*....|...
gi 22326785 193 adkYPNVFSQESLFgrfrYALPCFTISAFALLVTVLCcfIPET 235
Cdd:cd17357 411 ---FPPLQSIGGGF----VFIIFAIPCALFLLYLYRY--LPET 444
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH