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Conserved domains on  [gi|145357610|ref|NP_195999|]
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homeobox 51 [Arabidopsis thaliana]

Protein Classification

homeobox-leucine zipper protein( domain architecture ID 11079011)

homeobox-leucine zipper protein is a transcription factor that may function in plant development and/or in stress adaptation

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Homeodomain pfam00046
Homeodomain;
77-130 4.67e-18

Homeodomain;


:

Pssm-ID: 459649 [Multi-domain]  Cd Length: 57  Bit Score: 75.23  E-value: 4.67e-18
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 145357610   77 KKKR--LTSGQLASLERSFQEEIKLDSDRKVKLSRELGLQPRQIAVWFQNRRARWK 130
Cdd:pfam00046   1 RRKRttFTPEQLEELEKEFQENPYPSAEEREELAAQLGLTERQVKVWFQNRRAKWK 56
HALZ pfam02183
Homeobox associated leucine zipper;
132-166 4.31e-06

Homeobox associated leucine zipper;


:

Pssm-ID: 460477 [Multi-domain]  Cd Length: 42  Bit Score: 42.51  E-value: 4.31e-06
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|..
gi 145357610  132 KQLEQLYDSLRQEYDVVS-------REKQMLHDEVKKLRALL 166
Cdd:pfam02183   1 KQLERDYDVLKASYDALKsdfdslkKENQKLQAELQELKEKL 42
 
Name Accession Description Interval E-value
Homeodomain pfam00046
Homeodomain;
77-130 4.67e-18

Homeodomain;


Pssm-ID: 459649 [Multi-domain]  Cd Length: 57  Bit Score: 75.23  E-value: 4.67e-18
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 145357610   77 KKKR--LTSGQLASLERSFQEEIKLDSDRKVKLSRELGLQPRQIAVWFQNRRARWK 130
Cdd:pfam00046   1 RRKRttFTPEQLEELEKEFQENPYPSAEEREELAAQLGLTERQVKVWFQNRRAKWK 56
HOX smart00389
Homeodomain; DNA-binding factors that are involved in the transcriptional regulation of key ...
 77-130 1.85e-16

Homeodomain; DNA-binding factors that are involved in the transcriptional regulation of key developmental processes


Pssm-ID: 197696 [Multi-domain]  Cd Length: 57  Bit Score: 70.74  E-value: 1.85e-16
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*.
gi 145357610    77 KKKR--LTSGQLASLERSFQEEIKLDSDRKVKLSRELGLQPRQIAVWFQNRRARWK 130
Cdd:smart00389   2 RRKRtsFTPEQLEELEKEFQKNPYPSREEREELAKKLGLSERQVKVWFQNRRAKWK 57
homeodomain cd00086
Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic ...
 77-133 1.43e-14

Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.


Pssm-ID: 238039 [Multi-domain]  Cd Length: 59  Bit Score: 66.11  E-value: 1.43e-14
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 145357610  77 KKKRLTSGQLASLERSFQEEIKLDSDRKVKLSRELGLQPRQIAVWFQNRRARWKAKQ 133
Cdd:cd00086    3 KRTRFTPEQLEELEKEFEKNPYPSREEREELAKELGLTERQVKIWFQNRRAKLKRSE 59
COG5576 COG5576
Homeodomain-containing transcription factor [Transcription];
58-133 3.12e-10

Homeodomain-containing transcription factor [Transcription];


Pssm-ID: 227863 [Multi-domain]  Cd Length: 156  Bit Score: 57.06  E-value: 3.12e-10
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 145357610  58 ESEKIMNAYRFPNnnnemiKKKRLTSGQLASLERSFQEEIKLDSDRKVKLSRELGLQPRQIAVWFQNRRARWKAKQ 133
Cdd:COG5576   41 LERKQDGSSPPKS------KRRRTTDEQLMVLEREFEINPYPSSITRIKLSLLLNMPPKSVQIWFQNKRAKEKKKR 110
HALZ pfam02183
Homeobox associated leucine zipper;
132-166 4.31e-06

Homeobox associated leucine zipper;


Pssm-ID: 460477 [Multi-domain]  Cd Length: 42  Bit Score: 42.51  E-value: 4.31e-06
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|..
gi 145357610  132 KQLEQLYDSLRQEYDVVS-------REKQMLHDEVKKLRALL 166
Cdd:pfam02183   1 KQLERDYDVLKASYDALKsdfdslkKENQKLQAELQELKEKL 42
GlnD COG2844
UTP:GlnB (protein PII) uridylyltransferase [Posttranslational modification, protein turnover, ...
 129-178 2.60e-03

UTP:GlnB (protein PII) uridylyltransferase [Posttranslational modification, protein turnover, chaperones, Signal transduction mechanisms];


Pssm-ID: 442092 [Multi-domain]  Cd Length: 864  Bit Score: 38.58  E-value: 2.60e-03
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 145357610 129 WKAKQLEQLYDS----LRQEYDVVSREKQMlhDEVK-KLRALLRDQGLIKKQISA 178
Cdd:COG2844  581 WKASLLRELYRAtlraLRGGLEPPDREERI--EERKeEALALLADQGWDEEEIEA 633
 
Name Accession Description Interval E-value
Homeodomain pfam00046
Homeodomain;
77-130 4.67e-18

Homeodomain;


Pssm-ID: 459649 [Multi-domain]  Cd Length: 57  Bit Score: 75.23  E-value: 4.67e-18
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 145357610   77 KKKR--LTSGQLASLERSFQEEIKLDSDRKVKLSRELGLQPRQIAVWFQNRRARWK 130
Cdd:pfam00046   1 RRKRttFTPEQLEELEKEFQENPYPSAEEREELAAQLGLTERQVKVWFQNRRAKWK 56
HOX smart00389
Homeodomain; DNA-binding factors that are involved in the transcriptional regulation of key ...
 77-130 1.85e-16

Homeodomain; DNA-binding factors that are involved in the transcriptional regulation of key developmental processes


Pssm-ID: 197696 [Multi-domain]  Cd Length: 57  Bit Score: 70.74  E-value: 1.85e-16
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*.
gi 145357610    77 KKKR--LTSGQLASLERSFQEEIKLDSDRKVKLSRELGLQPRQIAVWFQNRRARWK 130
Cdd:smart00389   2 RRKRtsFTPEQLEELEKEFQKNPYPSREEREELAKKLGLSERQVKVWFQNRRAKWK 57
homeodomain cd00086
Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic ...
 77-133 1.43e-14

Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.


Pssm-ID: 238039 [Multi-domain]  Cd Length: 59  Bit Score: 66.11  E-value: 1.43e-14
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 145357610  77 KKKRLTSGQLASLERSFQEEIKLDSDRKVKLSRELGLQPRQIAVWFQNRRARWKAKQ 133
Cdd:cd00086    3 KRTRFTPEQLEELEKEFEKNPYPSREEREELAKELGLTERQVKIWFQNRRAKLKRSE 59
COG5576 COG5576
Homeodomain-containing transcription factor [Transcription];
58-133 3.12e-10

Homeodomain-containing transcription factor [Transcription];


Pssm-ID: 227863 [Multi-domain]  Cd Length: 156  Bit Score: 57.06  E-value: 3.12e-10
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 145357610  58 ESEKIMNAYRFPNnnnemiKKKRLTSGQLASLERSFQEEIKLDSDRKVKLSRELGLQPRQIAVWFQNRRARWKAKQ 133
Cdd:COG5576   41 LERKQDGSSPPKS------KRRRTTDEQLMVLEREFEINPYPSSITRIKLSLLLNMPPKSVQIWFQNKRAKEKKKR 110
HALZ pfam02183
Homeobox associated leucine zipper;
132-166 4.31e-06

Homeobox associated leucine zipper;


Pssm-ID: 460477 [Multi-domain]  Cd Length: 42  Bit Score: 42.51  E-value: 4.31e-06
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|..
gi 145357610  132 KQLEQLYDSLRQEYDVVS-------REKQMLHDEVKKLRALL 166
Cdd:pfam02183   1 KQLERDYDVLKASYDALKsdfdslkKENQKLQAELQELKEKL 42
GlnD COG2844
UTP:GlnB (protein PII) uridylyltransferase [Posttranslational modification, protein turnover, ...
 129-178 2.60e-03

UTP:GlnB (protein PII) uridylyltransferase [Posttranslational modification, protein turnover, chaperones, Signal transduction mechanisms];


Pssm-ID: 442092 [Multi-domain]  Cd Length: 864  Bit Score: 38.58  E-value: 2.60e-03
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 145357610 129 WKAKQLEQLYDS----LRQEYDVVSREKQMlhDEVK-KLRALLRDQGLIKKQISA 178
Cdd:COG2844  581 WKASLLRELYRAtlraLRGGLEPPDREERI--EERKeEALALLADQGWDEEEIEA 633
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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