NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|15234825|ref|NP_195595|]
View 

SAUR-like auxin-responsive protein family [Arabidopsis thaliana]

Protein Classification

SAUR-like auxin-responsive family protein( domain architecture ID 581161)

SAUR-like auxin-responsive family protein similar to Arabidopsis thaliana SAUR proteins that may provide a mechanistic link between auxin and plasma membrane H(+)-ATPases (PM H(+)-ATPases)

Gene Ontology:  GO:0009733

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
PLN03090 super family cl23790
auxin-responsive family protein; Provisional
 33-98 6.25e-31

auxin-responsive family protein; Provisional


The actual alignment was detected with superfamily member PLN03220:

Pssm-ID: 474056  Cd Length: 105  Bit Score: 105.21  E-value: 6.25e-31
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15234825   33 VPKGYLAVYVGEQ---NMKRFVVPVSYLDQPSFQDLLRKAEEEFGFDHPMGGLTIPCSEEIFIDL-ASRF 98
Cdd:PLN03220  35 VPKGHVAVYVGEQiemEKKRFVVPISFLNHPSFKEFLSRAEEEFGFNHPMGGLTIPCREEVFLDLiASRL 104
 
Name Accession Description Interval E-value
PLN03220 PLN03220
uncharacterized protein; Provisional
 33-98 6.25e-31

uncharacterized protein; Provisional


Pssm-ID: 178759  Cd Length: 105  Bit Score: 105.21  E-value: 6.25e-31
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15234825   33 VPKGYLAVYVGEQ---NMKRFVVPVSYLDQPSFQDLLRKAEEEFGFDHPMGGLTIPCSEEIFIDL-ASRF 98
Cdd:PLN03220  35 VPKGHVAVYVGEQiemEKKRFVVPISFLNHPSFKEFLSRAEEEFGFNHPMGGLTIPCREEVFLDLiASRL 104
Auxin_inducible pfam02519
Auxin responsive protein; This family consists of the protein products of the ARG7 auxin ...
 33-91 2.58e-24

Auxin responsive protein; This family consists of the protein products of the ARG7 auxin responsive genes family none of which have any identified functional role.


Pssm-ID: 460580  Cd Length: 92  Bit Score: 87.69  E-value: 2.58e-24
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 15234825   33 VPKGYLAVYVGEqNMKRFVVPVSYLDQPSFQDLLRKAEEEFGFDHpMGGLTIPCSEEIF 91
Cdd:pfam02519 31 PEKGHFVVYVGD-ERRRFVVPLEYLNHPLFRELLRMSEEEFGFPS-DGPITLPCDVVVF 87
 
Name Accession Description Interval E-value
PLN03220 PLN03220
uncharacterized protein; Provisional
 33-98 6.25e-31

uncharacterized protein; Provisional


Pssm-ID: 178759  Cd Length: 105  Bit Score: 105.21  E-value: 6.25e-31
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15234825   33 VPKGYLAVYVGEQ---NMKRFVVPVSYLDQPSFQDLLRKAEEEFGFDHPMGGLTIPCSEEIFIDL-ASRF 98
Cdd:PLN03220  35 VPKGHVAVYVGEQiemEKKRFVVPISFLNHPSFKEFLSRAEEEFGFNHPMGGLTIPCREEVFLDLiASRL 104
PLN03090 PLN03090
auxin-responsive family protein; Provisional
 13-98 2.54e-28

auxin-responsive family protein; Provisional


Pssm-ID: 178639  Cd Length: 104  Bit Score: 98.30  E-value: 2.54e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15234825   13 KQILRQ----AKLLSSSSSSSSLDVPKGYLAVYVGEqNMKRFVVPVSYLDQPSFQDLLRKAEEEFGFDHPMgGLTIPCSE 88
Cdd:PLN03090  16 KQILKRcsslGKKQGYDEDGLPLDVPKGHFPVYVGE-NRSRYIVPISFLTHPEFQSLLQQAEEEFGFDHDM-GLTIPCEE 93

                         90
                 ....*....|
gi 15234825   89 EIFIDLASRF 98
Cdd:PLN03090  94 VVFRSLTSMI 103
PLN03219 PLN03219
uncharacterized protein; Provisional
 33-96 3.52e-26

uncharacterized protein; Provisional


Pssm-ID: 178758 [Multi-domain]  Cd Length: 108  Bit Score: 93.28  E-value: 3.52e-26
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 15234825   33 VPKGYLAVYVGEQ-NMKRFVVPVSYLDQPSFQDLLRKAEEEFGFDHPMGGLTIPCSEEIFIDLAS 96
Cdd:PLN03219  39 VPKGHVAVYVGEQmEKKRFVVPISYLNHPLFREFLNRAEEECGFHHSMGGLTIPCREESFLHLIT 103
Auxin_inducible pfam02519
Auxin responsive protein; This family consists of the protein products of the ARG7 auxin ...
 33-91 2.58e-24

Auxin responsive protein; This family consists of the protein products of the ARG7 auxin responsive genes family none of which have any identified functional role.


Pssm-ID: 460580  Cd Length: 92  Bit Score: 87.69  E-value: 2.58e-24
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 15234825   33 VPKGYLAVYVGEqNMKRFVVPVSYLDQPSFQDLLRKAEEEFGFDHpMGGLTIPCSEEIF 91
Cdd:pfam02519 31 PEKGHFVVYVGD-ERRRFVVPLEYLNHPLFRELLRMSEEEFGFPS-DGPITLPCDVVVF 87
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH