|
Name |
Accession |
Description |
Interval |
E-value |
| PLN00113 |
PLN00113 |
leucine-rich repeat receptor-like protein kinase; Provisional |
98-363 |
2.43e-33 |
|
leucine-rich repeat receptor-like protein kinase; Provisional
Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 137.29 E-value: 2.43e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15235186 98 KAIFSDPFNTTGNWHGPH-VCGYTGVVCapalddSDVTVVAGVDLNGADIAGHLPAELGLMTDVAMFHLNSNRFCGIIPK 176
Cdd:PLN00113 38 KSSINDPLKYLSNWNSSAdVCLWQGITC------NNSSRVVSIDLSGKNISGKISSAIFRLPYIQTINLSNNQLSGPIPD 111
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15235186 177 S-FEKLKLMHEFDVSNNRFVGPFPNVvlSWPDVKYFDLRFNDFEGQVPPEL-FKKELDAIFLNDNRFTSVIPESLGE-SP 253
Cdd:PLN00113 112 DiFTTSSSLRYLNLSNNNFTGSIPRG--SIPNLETLDLSNNMLSGEIPNDIgSFSSLKVLDLGGNVLVGKIPNSLTNlTS 189
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15235186 254 ASVVTFANNKFTGCIPKSIGNMKNLNEIVFMDNDLGGCFPSEIGKLSNVTVFDASKNSFIGRLPTSFVGLTSVEEIDISG 333
Cdd:PLN00113 190 LEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQ 269
|
250 260 270
....*....|....*....|....*....|
gi 15235186 334 NKLTGLVPHNICQLPNLVNLTYSYNYFSGQ 363
Cdd:PLN00113 270 NKLSGPIPPSIFSLQKLISLDLSDNSLSGE 299
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
173-362 |
8.29e-25 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 107.71 E-value: 8.29e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15235186 173 IIPKSFEKLKLMHEFDVSNNRFVGPFPNVvlswpdvKYFDLRFNDFEgQVPPELFK-KELDAIFLNDNRFTSvIPESLGE 251
Cdd:COG4886 87 LGLTDLGDLTNLTELDLSGNEELSNLTNL-------ESLDLSGNQLT-DLPEELANlTNLKELDLSNNQLTD-LPEPLGN 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15235186 252 SPA-SVVTFANNKFTGcIPKSIGNMKNLNEIVFMDNDLGGcFPSEIGKLSNVTVFDASKNSfIGRLPTSFVGLTSVEEID 330
Cdd:COG4886 158 LTNlKSLDLSNNQLTD-LPEELGNLTNLKELDLSNNQITD-LPEPLGNLTNLEELDLSGNQ-LTDLPEPLANLTNLETLD 234
|
170 180 190
....*....|....*....|....*....|..
gi 15235186 331 ISGNKLTGLvPhNICQLPNLVNLTYSYNYFSG 362
Cdd:COG4886 235 LSNNQLTDL-P-ELGNLTNLEELDLSNNQLTD 264
|
|
| PRK14950 |
PRK14950 |
DNA polymerase III subunits gamma and tau; Provisional |
398-499 |
7.90e-07 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 52.50 E-value: 7.90e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15235186 398 AVVINRPVdcskdkCAGGSSTPSKPSPVhKPTPVPTTPVhKPTPVPTTPVQKPSPVPTTPVQKPSPVPTTPVHEPSPVLA 477
Cdd:PRK14950 358 ALLVPVPA------PQPAKPTAAAPSPV-RPTPAPSTRP-KAAAAANIPPKEPVRETATPPPVPPRPVAPPVPHTPESAP 429
|
90 100
....*....|....*....|...
gi 15235186 478 TPVDKPSPVPSRPV-QKPQPPKE 499
Cdd:PRK14950 430 KLTRAAIPVDEKPKyTPPAPPKE 452
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
310-360 |
1.21e-05 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 43.28 E-value: 1.21e-05
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|..
gi 15235186 310 NSFIGRL-PTSFVGLTSVEEIDISGNKLTGLVPHNICQLPNLVNLTYSYNYF 360
Cdd:pfam13855 10 NNRLTSLdDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
|
|
| DamX |
COG3266 |
Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell ... |
414-514 |
1.76e-05 |
|
Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442497 [Multi-domain] Cd Length: 455 Bit Score: 47.92 E-value: 1.76e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15235186 414 GGSSTPSKPSPVHKPTPVPTTPVHKPTPVPTTPVQKP-SPVPTTPVQKPSPVPTTPVHEPSPVLATPVDKPSPVPSRPVq 492
Cdd:COG3266 261 ASSASAPATTSLGEQQEVSLPPAVAAQPAAAAAAQPSaVALPAAPAAAAAAAAPAEAAAPQPTAAKPVVTETAAPAAPA- 339
|
90 100
....*....|....*....|..
gi 15235186 493 kPQPPKESPQPDDPYDQSPVTK 514
Cdd:COG3266 340 -PEAAAAAAAPAAPAVAKKLAA 360
|
|
| PspC_subgroup_2 |
NF033839 |
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, ... |
427-511 |
2.00e-05 |
|
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site. The other form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A.
Pssm-ID: 468202 [Multi-domain] Cd Length: 557 Bit Score: 47.84 E-value: 2.00e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15235186 427 KPTPVPTTPVHKPTPVPTTPVQKPSPVPTTPVQKPSPVPTTPVHEPSPVLATPVDKPSPVPSRPVQKPQPPKESPQPD-D 505
Cdd:NF033839 276 KKGLTQDTPKEPGNKKPSAPKPGMQPSPQPEKKEVKPEPETPKPEVKPQLEKPKPEVKPQPEKPKPEVKPQLETPKPEvK 355
|
....*.
gi 15235186 506 PYDQSP 511
Cdd:NF033839 356 PQPEKP 361
|
|
| PspC_subgroup_2 |
NF033839 |
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, ... |
415-543 |
2.95e-05 |
|
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site. The other form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A.
Pssm-ID: 468202 [Multi-domain] Cd Length: 557 Bit Score: 47.07 E-value: 2.95e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15235186 415 GSSTPSKPSPVHKPTPVPTTPVHKPTPVPTTPVQKPSPvpTTPVQKPSPVPTTPVHEPSPVLATPVDKPSPVPSRPVQKP 494
Cdd:NF033839 288 GNKKPSAPKPGMQPSPQPEKKEVKPEPETPKPEVKPQL--EKPKPEVKPQPEKPKPEVKPQLETPKPEVKPQPEKPKPEV 365
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|..
gi 15235186 495 QPPKESPQPD---DPYDQSPVTKRRSPPPAPVNSPPPPVYSPPPPPPPVHSP 543
Cdd:NF033839 366 KPQPEKPKPEvkpQPETPKPEVKPQPEKPKPEVKPQPEKPKPEVKPQPEKPK 417
|
|
| SAV_2336_NTERM |
NF041121 |
SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 ... |
413-497 |
3.43e-04 |
|
SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 (BAC70047.1) whose C-terminal region suggests restriction enzyme activity (PMID: 18456708), and with other proteins with unrelated C-terminal regions. A member protein was also identified in a kanamycin biosynthetic gene cluster (PMID:16766657), while N-terminal regions of two other member proteins were named Trypco1 in a bioinformatic study (PMID:32101166) of predicted bacterial conflict systems.
Pssm-ID: 469044 [Multi-domain] Cd Length: 473 Bit Score: 43.84 E-value: 3.43e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15235186 413 AGGSSTPSKPSPVHKPTPVPTTPVHKPTPVPTTPVQKPSPVPTTPvqkPSPVPTTPVHEPSPVLATPVdkPSPVPSRPVQ 492
Cdd:NF041121 18 AAAPPSPEGPAPTAASQPATPPPPAAPPSPPGDPPEPPAPEPAPL---PAPYPGSLAPPPPPPPGPAG--AAPGAALPVR 92
|
....*
gi 15235186 493 KPQPP 497
Cdd:NF041121 93 VPAPP 97
|
|
| PspC_subgroup_1 |
NF033838 |
pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, ... |
442-506 |
4.50e-04 |
|
pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A. The other form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site.
Pssm-ID: 468201 [Multi-domain] Cd Length: 684 Bit Score: 43.46 E-value: 4.50e-04
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 15235186 442 VPTTPVQKPSPVPTTPVQKPSPVPTTPVHEPSPvlATPVD--------KPSPVPSRPVQKPQPPK--ESPQPDDP 506
Cdd:NF033838 412 VKEKPAEQPQPAPAPQPEKPAPKPEKPAEQPKA--EKPADqqaeedyaRRSEEEYNRLTQQQPPKteKPAQPSTP 484
|
|
| TALPID3 |
pfam15324 |
Hedgehog signalling target; TALPID3 is a family of eukaryotic proteins that are targets for ... |
422-511 |
5.91e-04 |
|
Hedgehog signalling target; TALPID3 is a family of eukaryotic proteins that are targets for Hedgehog signalling. Mutations in this gene noticed first in chickens lead to multiple abnormalities of development.
Pssm-ID: 434634 [Multi-domain] Cd Length: 1288 Bit Score: 43.34 E-value: 5.91e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15235186 422 PSPVHKPTPVPTTPVHKPTPVPtTPVQKPSPVPTTPVQKPSPVPT------------TPVHEPSP-----------VLAT 478
Cdd:pfam15324 968 PVAASVPGDLPTKETLLPTPVP-TPQPTPPCSPPSPLKEPSPVKTpdsspcvsehdfFPVKEIPPekgadtgpavsLVIT 1046
|
90 100 110
....*....|....*....|....*....|...
gi 15235186 479 PVDKPSPVPsRPVQKPQPPKESPQPDDPYDQSP 511
Cdd:pfam15324 1047 PTVTPIATP-PPAATPTPPLSENSIDKLKSPSP 1078
|
|
| 2A1904 |
TIGR00927 |
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying ... |
436-516 |
6.90e-04 |
|
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273344 [Multi-domain] Cd Length: 1096 Bit Score: 43.06 E-value: 6.90e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15235186 436 VHKPTPVPTTPVQ-KPSPVPTTPVQ-----KPSPV-PTTPvhepSPVLATPVDKPSPVPSRPVQKPQPPKESPQPDDPYD 508
Cdd:TIGR00927 370 EKNPSTAPSTPATpRVRAVLTTQVHhcvvvKPAPAvPTTP----SPSLTTALFPEAPSPSPSALPPGQPDLHPKAEYPPD 445
|
....*...
gi 15235186 509 QSPVTKRR 516
Cdd:TIGR00927 446 LFSVEERR 453
|
|
| PspC_subgroup_1 |
NF033838 |
pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, ... |
464-509 |
2.78e-03 |
|
pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A. The other form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site.
Pssm-ID: 468201 [Multi-domain] Cd Length: 684 Bit Score: 41.15 E-value: 2.78e-03
10 20 30 40
....*....|....*....|....*....|....*....|....*.
gi 15235186 464 VPTTPVHEPSPVlatpvdkPSPVPSRPVQKPQPPKESPQPDDPYDQ 509
Cdd:NF033838 412 VKEKPAEQPQPA-------PAPQPEKPAPKPEKPAEQPKAEKPADQ 450
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| PLN00113 |
PLN00113 |
leucine-rich repeat receptor-like protein kinase; Provisional |
98-363 |
2.43e-33 |
|
leucine-rich repeat receptor-like protein kinase; Provisional
Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 137.29 E-value: 2.43e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15235186 98 KAIFSDPFNTTGNWHGPH-VCGYTGVVCapalddSDVTVVAGVDLNGADIAGHLPAELGLMTDVAMFHLNSNRFCGIIPK 176
Cdd:PLN00113 38 KSSINDPLKYLSNWNSSAdVCLWQGITC------NNSSRVVSIDLSGKNISGKISSAIFRLPYIQTINLSNNQLSGPIPD 111
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15235186 177 S-FEKLKLMHEFDVSNNRFVGPFPNVvlSWPDVKYFDLRFNDFEGQVPPEL-FKKELDAIFLNDNRFTSVIPESLGE-SP 253
Cdd:PLN00113 112 DiFTTSSSLRYLNLSNNNFTGSIPRG--SIPNLETLDLSNNMLSGEIPNDIgSFSSLKVLDLGGNVLVGKIPNSLTNlTS 189
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15235186 254 ASVVTFANNKFTGCIPKSIGNMKNLNEIVFMDNDLGGCFPSEIGKLSNVTVFDASKNSFIGRLPTSFVGLTSVEEIDISG 333
Cdd:PLN00113 190 LEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQ 269
|
250 260 270
....*....|....*....|....*....|
gi 15235186 334 NKLTGLVPHNICQLPNLVNLTYSYNYFSGQ 363
Cdd:PLN00113 270 NKLSGPIPPSIFSLQKLISLDLSDNSLSGE 299
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
173-362 |
8.29e-25 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 107.71 E-value: 8.29e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15235186 173 IIPKSFEKLKLMHEFDVSNNRFVGPFPNVvlswpdvKYFDLRFNDFEgQVPPELFK-KELDAIFLNDNRFTSvIPESLGE 251
Cdd:COG4886 87 LGLTDLGDLTNLTELDLSGNEELSNLTNL-------ESLDLSGNQLT-DLPEELANlTNLKELDLSNNQLTD-LPEPLGN 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15235186 252 SPA-SVVTFANNKFTGcIPKSIGNMKNLNEIVFMDNDLGGcFPSEIGKLSNVTVFDASKNSfIGRLPTSFVGLTSVEEID 330
Cdd:COG4886 158 LTNlKSLDLSNNQLTD-LPEELGNLTNLKELDLSNNQITD-LPEPLGNLTNLEELDLSGNQ-LTDLPEPLANLTNLETLD 234
|
170 180 190
....*....|....*....|....*....|..
gi 15235186 331 ISGNKLTGLvPhNICQLPNLVNLTYSYNYFSG 362
Cdd:COG4886 235 LSNNQLTDL-P-ELGNLTNLEELDLSNNQLTD 264
|
|
| PLN00113 |
PLN00113 |
leucine-rich repeat receptor-like protein kinase; Provisional |
139-383 |
5.80e-24 |
|
leucine-rich repeat receptor-like protein kinase; Provisional
Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 108.01 E-value: 5.80e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15235186 139 VDLNGADIAGHLPAELGLMTDVAMFHLNSNRFCGIIPKSFEKLKLMHEFDVSNNRFVGPFPNVVLSWPDVKYFDLRFNDF 218
Cdd:PLN00113 241 LDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNF 320
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15235186 219 EGQVPPELFK-KELDAIFLNDNRFTSVIPESLGE-SPASVVTFANNKFTGCIPKSIGNMKNLNEIVFMDNDLGGCFPSEI 296
Cdd:PLN00113 321 TGKIPVALTSlPRLQVLQLWSNKFSGEIPKNLGKhNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSL 400
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15235186 297 GKLSNVTVFDASKNSFIGRLPTSFVGLTSVEEIDISGNKLTGLVPHNICQLPNLVNLTYSYNYFSGQggscVPG--GSRK 374
Cdd:PLN00113 401 GACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGG----LPDsfGSKR 476
|
....*....
gi 15235186 375 EIALDDTRN 383
Cdd:PLN00113 477 LENLDLSRN 485
|
|
| PLN00113 |
PLN00113 |
leucine-rich repeat receptor-like protein kinase; Provisional |
139-362 |
2.50e-23 |
|
leucine-rich repeat receptor-like protein kinase; Provisional
Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 105.70 E-value: 2.50e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15235186 139 VDLNGADIAGHLPAEL---GLMTDVAMFhlnSNRFCGIIPKSFEKLKLMHEFDVSNNRFVGPFPNVVLSWPDVKYFDLRF 215
Cdd:PLN00113 361 LDLSTNNLTGEIPEGLcssGNLFKLILF---SNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISN 437
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15235186 216 NDFEGQVPPELFK-KELDAIFLNDNRFTSVIPESLGESPASVVTFANNKFTGCIPKSIGNMKNLNEIVFMDNDLGGCFPS 294
Cdd:PLN00113 438 NNLQGRINSRKWDmPSLQMLSLARNKFFGGLPDSFGSKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPD 517
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 15235186 295 EIGKLSNVTVFDASKNSFIGRLPTSFVGLTSVEEIDISGNKLTGLVPHNICQLPNLVNLTYSYNYFSG 362
Cdd:PLN00113 518 ELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHG 585
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
175-362 |
1.44e-21 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 97.70 E-value: 1.44e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15235186 175 PKSFEKLKLMHEFDVSNNRfVGPFPNVVLSWPDVKYFDLRFNDFEgQVPPELFK-KELDAIFLNDNRFTSvIPESLGESP 253
Cdd:COG4886 106 NEELSNLTNLESLDLSGNQ-LTDLPEELANLTNLKELDLSNNQLT-DLPEPLGNlTNLKSLDLSNNQLTD-LPEELGNLT 182
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15235186 254 A-SVVTFANNKFTGcIPKSIGNMKNLNEIVFMDNDLGGcFPSEIGKLSNVTVFDASKNSfIGRLPtSFVGLTSVEEIDIS 332
Cdd:COG4886 183 NlKELDLSNNQITD-LPEPLGNLTNLEELDLSGNQLTD-LPEPLANLTNLETLDLSNNQ-LTDLP-ELGNLTNLEELDLS 258
|
170 180 190
....*....|....*....|....*....|
gi 15235186 333 GNKLTGLvpHNICQLPNLVNLTYSYNYFSG 362
Cdd:COG4886 259 NNQLTDL--PPLANLTNLKTLDLSNNQLTD 286
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
153-363 |
9.14e-20 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 92.30 E-value: 9.14e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15235186 153 ELGLMTDVAMFHLNSNRFCGIiPKSFEKLKLMHEFDVSNNRFvGPFPNVVLSWPDVKYFDLRFNDFEGqVPPELFK-KEL 231
Cdd:COG4886 108 ELSNLTNLESLDLSGNQLTDL-PEELANLTNLKELDLSNNQL-TDLPEPLGNLTNLKSLDLSNNQLTD-LPEELGNlTNL 184
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15235186 232 DAIFLNDNRFTSvIPESLGESPA-SVVTFANNKFTGcIPKSIGNMKNLNEIVFMDNDLGGcFPsEIGKLSNVTVFDASKN 310
Cdd:COG4886 185 KELDLSNNQITD-LPEPLGNLTNlEELDLSGNQLTD-LPEPLANLTNLETLDLSNNQLTD-LP-ELGNLTNLEELDLSNN 260
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|...
gi 15235186 311 SfIGRLPTSFvGLTSVEEIDISGNKLTGLVPHNICQLPNLVNLTYSYNYFSGQ 363
Cdd:COG4886 261 Q-LTDLPPLA-NLTNLKTLDLSNNQLTDLKLKELELLLGLNSLLLLLLLLNLL 311
|
|
| PLN00113 |
PLN00113 |
leucine-rich repeat receptor-like protein kinase; Provisional |
132-363 |
3.10e-19 |
|
leucine-rich repeat receptor-like protein kinase; Provisional
Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 92.60 E-value: 3.10e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15235186 132 DVTVVAGVDLNGADIAGHLPAELGLMTDVAMFHLNSNRFCGIIPK---SFEKLKLMHEF--------------------- 187
Cdd:PLN00113 282 SLQKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPValtSLPRLQVLQLWsnkfsgeipknlgkhnnltvl 361
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15235186 188 DVSNNRFVGPFPNVVLSWPDVKYFDLRFNDFEGQVPPELFK-KELDAIFLNDNRFTSVIPESLGESPasVVTF---ANNK 263
Cdd:PLN00113 362 DLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGAcRSLRRVRLQDNSFSGELPSEFTKLP--LVYFldiSNNN 439
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15235186 264 FTGCIPKSIGNMKNLNEIVFMDNDLGGCFPSEIGKlSNVTVFDASKNSFIGRLPTSFVGLTSVEEIDISGNKLTGLVPHN 343
Cdd:PLN00113 440 LQGRINSRKWDMPSLQMLSLARNKFFGGLPDSFGS-KRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDE 518
|
250 260
....*....|....*....|
gi 15235186 344 ICQLPNLVNLTYSYNYFSGQ 363
Cdd:PLN00113 519 LSSCKKLVSLDLSHNQLSGQ 538
|
|
| PLN00113 |
PLN00113 |
leucine-rich repeat receptor-like protein kinase; Provisional |
145-363 |
2.84e-18 |
|
leucine-rich repeat receptor-like protein kinase; Provisional
Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 89.52 E-value: 2.84e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15235186 145 DIAGHLPAELGLMTDVAMFHLNSNRFCGIIPKSFEKLKLMHEFDVSNNRFVGPFPNVVLSWPDVKYFDLRFNDFEGQVPP 224
Cdd:PLN00113 319 NFTGKIPVALTSLPRLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPK 398
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15235186 225 EL---------------FKKELDAIF----------LNDNRFTSVIPESLGESPA-SVVTFANNKFTGCIPKSIGNmKNL 278
Cdd:PLN00113 399 SLgacrslrrvrlqdnsFSGELPSEFtklplvyfldISNNNLQGRINSRKWDMPSlQMLSLARNKFFGGLPDSFGS-KRL 477
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15235186 279 NEIVFMDNDLGGCFPSEIGKLSNVTVFDASKNSFIGRLPTSFVGLTSVEEIDISGNKLTGLVPHNICQLPNLVNLTYSYN 358
Cdd:PLN00113 478 ENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQN 557
|
....*
gi 15235186 359 YFSGQ 363
Cdd:PLN00113 558 QLSGE 562
|
|
| PLN00113 |
PLN00113 |
leucine-rich repeat receptor-like protein kinase; Provisional |
148-341 |
6.49e-17 |
|
leucine-rich repeat receptor-like protein kinase; Provisional
Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 85.28 E-value: 6.49e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15235186 148 GHLPAELGLMTDVAMFHLNSNRFCGIIPKSFEKLKLMHEFDVSNNRFVGPFPNVVLSWPDVKYFDLRFNDFEGQVPPELF 227
Cdd:PLN00113 394 GEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPDSFG 473
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15235186 228 KKELDAIFLNDNRFTSVIPESL-----------------GESPASV--------VTFANNKFTGCIPKSIGNMKNLNEIV 282
Cdd:PLN00113 474 SKRLENLDLSRNQFSGAVPRKLgslselmqlklsenklsGEIPDELssckklvsLDLSHNQLSGQIPASFSEMPVLSQLD 553
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 15235186 283 FMDNDLGGCFPSEIGKLSNVTVFDASKNSFIGRLPTS--FVGL--TSVEEIDI--SGNKLTGLVP 341
Cdd:PLN00113 554 LSQNQLSGEIPKNLGNVESLVQVNISHNHLHGSLPSTgaFLAInaSAVAGNIDlcGGDTTSGLPP 618
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
139-364 |
3.28e-10 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 62.64 E-value: 3.28e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15235186 139 VDLNGADIAgHLPAELGLMTDVAMFHLNSNRFcGIIPKSFEKLKLMHEFDVSNNRFVGpFPNVVLSWPDVKYFDLRFNDF 218
Cdd:COG4886 118 LDLSGNQLT-DLPEELANLTNLKELDLSNNQL-TDLPEPLGNLTNLKSLDLSNNQLTD-LPEELGNLTNLKELDLSNNQI 194
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15235186 219 EgQVPPELFK-KELDAIFLNDNRFTSvIPESLGESPA-----------------------SVVTFANNKFTGcIPKSiGN 274
Cdd:COG4886 195 T-DLPEPLGNlTNLEELDLSGNQLTD-LPEPLANLTNletldlsnnqltdlpelgnltnlEELDLSNNQLTD-LPPL-AN 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15235186 275 MKNLNEIVFMDNDLGGCFPSEIGKLSNVTVFDASKNSFIGRLPTSFVGLTSVEEIDISGNKLTGLVPHNICQLPNLVNLT 354
Cdd:COG4886 271 LTNLKTLDLSNNQLTDLKLKELELLLGLNSLLLLLLLLNLLELLILLLLLTTLLLLLLLLKGLLVTLTTLALSLSLLALL 350
|
250
....*....|
gi 15235186 355 YSYNYFSGQG 364
Cdd:COG4886 351 TLLLLLNLLS 360
|
|
| PLN03150 |
PLN03150 |
hypothetical protein; Provisional |
261-341 |
2.30e-08 |
|
hypothetical protein; Provisional
Pssm-ID: 178695 [Multi-domain] Cd Length: 623 Bit Score: 57.52 E-value: 2.30e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15235186 261 NNKFTGCIPKSIGNMKNLNEIVFMDNDLGGCFPSEIGKLSNVTVFDASKNSFIGRLPTSFVGLTSVEEIDISGNKLTGLV 340
Cdd:PLN03150 427 NQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRV 506
|
.
gi 15235186 341 P 341
Cdd:PLN03150 507 P 507
|
|
| PLN03150 |
PLN03150 |
hypothetical protein; Provisional |
284-370 |
1.70e-07 |
|
hypothetical protein; Provisional
Pssm-ID: 178695 [Multi-domain] Cd Length: 623 Bit Score: 54.44 E-value: 1.70e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15235186 284 MDND-LGGCFPSEIGKLSNVTVFDASKNSFIGRLPTSFVGLTSVEEIDISGNKLTGLVPHNICQLPNLVNLTYSYNYFSG 362
Cdd:PLN03150 425 LDNQgLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSG 504
|
....*...
gi 15235186 363 QggscVPG 370
Cdd:PLN03150 505 R----VPA 508
|
|
| PRK14950 |
PRK14950 |
DNA polymerase III subunits gamma and tau; Provisional |
398-499 |
7.90e-07 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 52.50 E-value: 7.90e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15235186 398 AVVINRPVdcskdkCAGGSSTPSKPSPVhKPTPVPTTPVhKPTPVPTTPVQKPSPVPTTPVQKPSPVPTTPVHEPSPVLA 477
Cdd:PRK14950 358 ALLVPVPA------PQPAKPTAAAPSPV-RPTPAPSTRP-KAAAAANIPPKEPVRETATPPPVPPRPVAPPVPHTPESAP 429
|
90 100
....*....|....*....|...
gi 15235186 478 TPVDKPSPVPSRPV-QKPQPPKE 499
Cdd:PRK14950 430 KLTRAAIPVDEKPKyTPPAPPKE 452
|
|
| PRK14950 |
PRK14950 |
DNA polymerase III subunits gamma and tau; Provisional |
424-521 |
1.14e-06 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 51.73 E-value: 1.14e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15235186 424 PVHKPTPVPTTPvhkPTPVPTTPVQKPSPVPTTPVQKPSPvPTTPVHEPSPvlatpvdkPSPVPSRPVQKPQPPKESPQP 503
Cdd:PRK14950 362 PVPAPQPAKPTA---AAPSPVRPTPAPSTRPKAAAAANIP-PKEPVRETAT--------PPPVPPRPVAPPVPHTPESAP 429
|
90
....*....|....*...
gi 15235186 504 DDPYDQSPVTKRRSPPPA 521
Cdd:PRK14950 430 KLTRAAIPVDEKPKYTPP 447
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
310-360 |
1.21e-05 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 43.28 E-value: 1.21e-05
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|..
gi 15235186 310 NSFIGRL-PTSFVGLTSVEEIDISGNKLTGLVPHNICQLPNLVNLTYSYNYF 360
Cdd:pfam13855 10 NNRLTSLdDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
418-505 |
1.32e-05 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 48.78 E-value: 1.32e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15235186 418 TPSKPSPVHKPTPVPTTPVHKPTPVPTTPVQKPSPVPTTPvQKPSPVPTTPVHEPSPVLATPVDKPSPVPSRPVQKPQPP 497
Cdd:PHA03247 382 TRKRRSARHAATPFARGPGGDDQTRPAAPVPASVPTPAPT-PVPASAPPPPATPLPSAEPGSDDGPAPPPERQPPAPATE 460
|
....*...
gi 15235186 498 KESPQPDD 505
Cdd:PHA03247 461 PAPDDPDD 468
|
|
| PTZ00449 |
PTZ00449 |
104 kDa microneme/rhoptry antigen; Provisional |
418-516 |
1.46e-05 |
|
104 kDa microneme/rhoptry antigen; Provisional
Pssm-ID: 185628 [Multi-domain] Cd Length: 943 Bit Score: 48.53 E-value: 1.46e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15235186 418 TPSKPSPVHKPTP--VPTTP--VHKPTPVPTTPVQKPSPVPTTPVQKPSPVPTTPVHEPSP-VLATPVDKP-----SPVP 487
Cdd:PTZ00449 710 TPGTPFTTPRPLPpkLPRDEefPFEPIGDPDAEQPDDIEFFTPPEEERTFFHETPADTPLPdILAEEFKEEdihaeTGEP 789
|
90 100 110
....*....|....*....|....*....|
gi 15235186 488 SRPVQKPQPPKE-SPQPDDPYDQSPVTKRR 516
Cdd:PTZ00449 790 DEAMKRPDSPSEhEDKPPGDHPSLPKKRHR 819
|
|
| PLN03150 |
PLN03150 |
hypothetical protein; Provisional |
220-297 |
1.49e-05 |
|
hypothetical protein; Provisional
Pssm-ID: 178695 [Multi-domain] Cd Length: 623 Bit Score: 48.27 E-value: 1.49e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15235186 220 GQVPPELFK-KELDAIFLNDNRFTSVIPESLGESPA-SVVTFANNKFTGCIPKSIGNMKNLNEIVFMDNDLGGCFPSEIG 297
Cdd:PLN03150 432 GFIPNDISKlRHLQSINLSGNSIRGNIPPSLGSITSlEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRVPAALG 511
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
415-523 |
1.53e-05 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 48.17 E-value: 1.53e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15235186 415 GSSTPSKPSPVHKP--TPVPTTPVHKPTPVPTTPvqkPSPVPTTPVQKPSPVPTTPVHEPSPVLATPVDKPSPVPSrPVQ 492
Cdd:PRK14951 367 AAAAEAAAPAEKKTpaRPEAAAPAAAPVAQAAAA---PAPAAAPAAAASAPAAPPAAAPPAPVAAPAAAAPAAAPA-AAP 442
|
90 100 110
....*....|....*....|....*....|.
gi 15235186 493 KPQPPKESPQPDDPYDQSPVTKRRSPPPAPV 523
Cdd:PRK14951 443 AAVALAPAPPAQAAPETVAIPVRVAPEPAVA 473
|
|
| DamX |
COG3266 |
Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell ... |
414-514 |
1.76e-05 |
|
Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442497 [Multi-domain] Cd Length: 455 Bit Score: 47.92 E-value: 1.76e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15235186 414 GGSSTPSKPSPVHKPTPVPTTPVHKPTPVPTTPVQKP-SPVPTTPVQKPSPVPTTPVHEPSPVLATPVDKPSPVPSRPVq 492
Cdd:COG3266 261 ASSASAPATTSLGEQQEVSLPPAVAAQPAAAAAAQPSaVALPAAPAAAAAAAAPAEAAAPQPTAAKPVVTETAAPAAPA- 339
|
90 100
....*....|....*....|..
gi 15235186 493 kPQPPKESPQPDDPYDQSPVTK 514
Cdd:COG3266 340 -PEAAAAAAAPAAPAVAKKLAA 360
|
|
| DamX |
COG3266 |
Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell ... |
416-507 |
1.84e-05 |
|
Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442497 [Multi-domain] Cd Length: 455 Bit Score: 47.92 E-value: 1.84e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15235186 416 SSTPSKPSPVHKPTPVPTTPVhKPTPVPTTPVQKPSPVPTTPVQKPSPVPTTPVHEPspvlATPVDKPSPVPSRPVQKPQ 495
Cdd:COG3266 276 QEVSLPPAVAAQPAAAAAAQP-SAVALPAAPAAAAAAAAPAEAAAPQPTAAKPVVTE----TAAPAAPAPEAAAAAAAPA 350
|
90 100
....*....|....*....|...
gi 15235186 496 PPKESP-----------QPDDPY 507
Cdd:COG3266 351 APAVAKklaadeqwlasQPASHY 373
|
|
| PspC_subgroup_2 |
NF033839 |
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, ... |
427-511 |
2.00e-05 |
|
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site. The other form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A.
Pssm-ID: 468202 [Multi-domain] Cd Length: 557 Bit Score: 47.84 E-value: 2.00e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15235186 427 KPTPVPTTPVHKPTPVPTTPVQKPSPVPTTPVQKPSPVPTTPVHEPSPVLATPVDKPSPVPSRPVQKPQPPKESPQPD-D 505
Cdd:NF033839 276 KKGLTQDTPKEPGNKKPSAPKPGMQPSPQPEKKEVKPEPETPKPEVKPQLEKPKPEVKPQPEKPKPEVKPQLETPKPEvK 355
|
....*.
gi 15235186 506 PYDQSP 511
Cdd:NF033839 356 PQPEKP 361
|
|
| PRK13042 |
PRK13042 |
superantigen-like protein SSL4; Reviewed; |
433-506 |
2.06e-05 |
|
superantigen-like protein SSL4; Reviewed;
Pssm-ID: 183854 [Multi-domain] Cd Length: 291 Bit Score: 46.93 E-value: 2.06e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15235186 433 TTPVHKPTPVPTTPVQKP-SPVPTTPVQKPSPVP--TTPvhePSPVLATPVDKPSPV--PSRPVQKPQPP--KESPQPDD 505
Cdd:PRK13042 24 TTQAANATTPSSTKVEAPqSTPPSTKVEAPQSKPnaTTP---PSTKVEAPQQTPNATtpSSTKVETPQSPttKQVPTEIN 100
|
.
gi 15235186 506 P 506
Cdd:PRK13042 101 P 101
|
|
| PspC_subgroup_2 |
NF033839 |
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, ... |
415-543 |
2.95e-05 |
|
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site. The other form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A.
Pssm-ID: 468202 [Multi-domain] Cd Length: 557 Bit Score: 47.07 E-value: 2.95e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15235186 415 GSSTPSKPSPVHKPTPVPTTPVHKPTPVPTTPVQKPSPvpTTPVQKPSPVPTTPVHEPSPVLATPVDKPSPVPSRPVQKP 494
Cdd:NF033839 288 GNKKPSAPKPGMQPSPQPEKKEVKPEPETPKPEVKPQL--EKPKPEVKPQPEKPKPEVKPQLETPKPEVKPQPEKPKPEV 365
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|..
gi 15235186 495 QPPKESPQPD---DPYDQSPVTKRRSPPPAPVNSPPPPVYSPPPPPPPVHSP 543
Cdd:NF033839 366 KPQPEKPKPEvkpQPETPKPEVKPQPEKPKPEVKPQPEKPKPEVKPQPEKPK 417
|
|
| PLN03150 |
PLN03150 |
hypothetical protein; Provisional |
165-262 |
4.93e-05 |
|
hypothetical protein; Provisional
Pssm-ID: 178695 [Multi-domain] Cd Length: 623 Bit Score: 46.73 E-value: 4.93e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15235186 165 LNSNRFCGIIPKSFEKLKLMHEFDVSNNRFVGPFPNVVLSWPDVKYFDLRFNDFEGQVPPELFK-KELDAIFLNDNRFTS 243
Cdd:PLN03150 425 LDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQlTSLRILNLNGNSLSG 504
|
90 100
....*....|....*....|.
gi 15235186 244 VIPESLGESP--ASVVTFANN 262
Cdd:PLN03150 505 RVPAALGGRLlhRASFNFTDN 525
|
|
| DamX |
COG3266 |
Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell ... |
416-506 |
6.41e-05 |
|
Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442497 [Multi-domain] Cd Length: 455 Bit Score: 46.00 E-value: 6.41e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15235186 416 SSTPSKPSPVHKPTpvpTTPVHKPTPVPTTPVQKPSPVPTTPVQKP-SPVPTTPVHEPSPVLATPVDKPSPVPSRPVQKP 494
Cdd:COG3266 255 LKAPSQASSASAPA---TTSLGEQQEVSLPPAVAAQPAAAAAAQPSaVALPAAPAAAAAAAAPAEAAAPQPTAAKPVVTE 331
|
90
....*....|..
gi 15235186 495 QPPKESPQPDDP 506
Cdd:COG3266 332 TAAPAAPAPEAA 343
|
|
| PRK14959 |
PRK14959 |
DNA polymerase III subunits gamma and tau; Provisional |
413-511 |
1.31e-04 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 184923 [Multi-domain] Cd Length: 624 Bit Score: 45.06 E-value: 1.31e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15235186 413 AGGSSTPSKPSPVHKPTPVP-------TTPVHKPTP---VPTTPVQKPSPVPTTPVQKPSPVPTTPVHEPSPVLATPvdK 482
Cdd:PRK14959 381 PSGSAAEGPASGGAATIPTPgtqgpqgTAPAAGMTPssaAPATPAPSAAPSPRVPWDDAPPAPPRSGIPPRPAPRMP--E 458
|
90 100
....*....|....*....|....*....
gi 15235186 483 PSPVPSRPVQKPQPPKESPQPDDPYDQSP 511
Cdd:PRK14959 459 ASPVPGAPDSVASASDAPPTLGDPSDTAE 487
|
|
| PRK10263 |
PRK10263 |
DNA translocase FtsK; Provisional |
386-513 |
1.40e-04 |
|
DNA translocase FtsK; Provisional
Pssm-ID: 236669 [Multi-domain] Cd Length: 1355 Bit Score: 45.46 E-value: 1.40e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15235186 386 ASRPEQRSAQECAVVINRPVDCSKDKCAGGSSTPSKPSPVHKPTPV--PTTPVHKPTPvPTTPVQKPSPVPTTPVQKPSP 463
Cdd:PRK10263 416 AQQPYYAPAPEQPAQQPYYAPAPEQPVAGNAWQAEEQQSTFAPQSTyqTEQTYQQPAA-QEPLYQQPQPVEQQPVVEPEP 494
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 15235186 464 V--PTTPVHEPSPVLATPVDKPS-----------PVPsRPVQKPQPPKESPQPDDPYDQSPVT 513
Cdd:PRK10263 495 VveETKPARPPLYYFEEVEEKRArereqlaawyqPIP-EPVKEPEPIKSSLKAPSVAAVPPVE 556
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
427-514 |
2.11e-04 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 44.88 E-value: 2.11e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15235186 427 KPTPVPTTPvhkPTPVPTTPVQKPSPVPTTPVQKPSPVPTTPVHEPSPVLATPVDKPSPVPSRPVQKPQPPKESPQPDDP 506
Cdd:PRK12270 37 GPGSTAAPT---AAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAV 113
|
....*...
gi 15235186 507 YDQSPVTK 514
Cdd:PRK12270 114 EDEVTPLR 121
|
|
| PRK07994 |
PRK07994 |
DNA polymerase III subunits gamma and tau; Validated |
422-507 |
2.23e-04 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 44.47 E-value: 2.23e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15235186 422 PSPVHKPTPVPTTPVHKPTPVPTTPVQKPSPVPTTPVQKPSPVPTTPVHEPSPVL--------------ATPVDKPSPVP 487
Cdd:PRK07994 366 PEPEVPPQSAAPAASAQATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSqllaarqqlqraqgATKAKKSEPAA 445
|
90 100 110
....*....|....*....|....*....|....
gi 15235186 488 S---RPV-----------QKPQPPKESPQPDDPY 507
Cdd:PRK07994 446 AsraRPVnsalerlasvrPAPSALEKAPAKKEAY 479
|
|
| PLN03150 |
PLN03150 |
hypothetical protein; Provisional |
257-323 |
3.40e-04 |
|
hypothetical protein; Provisional
Pssm-ID: 178695 [Multi-domain] Cd Length: 623 Bit Score: 44.04 E-value: 3.40e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 15235186 257 VTFANNKFTGCIPKSIGNMKNLNEIVFMDNDLGGCFPSEIGKLSNVTVFDASKNSFIGRLPTSFVGL 323
Cdd:PLN03150 447 INLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRVPAALGGR 513
|
|
| SAV_2336_NTERM |
NF041121 |
SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 ... |
413-497 |
3.43e-04 |
|
SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 (BAC70047.1) whose C-terminal region suggests restriction enzyme activity (PMID: 18456708), and with other proteins with unrelated C-terminal regions. A member protein was also identified in a kanamycin biosynthetic gene cluster (PMID:16766657), while N-terminal regions of two other member proteins were named Trypco1 in a bioinformatic study (PMID:32101166) of predicted bacterial conflict systems.
Pssm-ID: 469044 [Multi-domain] Cd Length: 473 Bit Score: 43.84 E-value: 3.43e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15235186 413 AGGSSTPSKPSPVHKPTPVPTTPVHKPTPVPTTPVQKPSPVPTTPvqkPSPVPTTPVHEPSPVLATPVdkPSPVPSRPVQ 492
Cdd:NF041121 18 AAAPPSPEGPAPTAASQPATPPPPAAPPSPPGDPPEPPAPEPAPL---PAPYPGSLAPPPPPPPGPAG--AAPGAALPVR 92
|
....*
gi 15235186 493 KPQPP 497
Cdd:NF041121 93 VPAPP 97
|
|
| PHA02682 |
PHA02682 |
ORF080 virion core protein; Provisional |
418-514 |
3.84e-04 |
|
ORF080 virion core protein; Provisional
Pssm-ID: 177464 [Multi-domain] Cd Length: 280 Bit Score: 42.93 E-value: 3.84e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15235186 418 TPSKPSPVHkPTPVPTTPVHKPtPVPTTPVQKPSPVPTTPvqkPSPVPTTP--VHEPSPVLATPVDKPS-----PVPSRP 490
Cdd:PHA02682 80 SPLAPSPAC-AAPAPACPACAP-AAPAPAVTCPAPAPACP---PATAPTCPppAVCPAPARPAPACPPStrqcpPAPPLP 154
|
90 100 110
....*....|....*....|....*....|.
gi 15235186 491 VQKPQPP-------KESPQPDDPYDQSPVTK 514
Cdd:PHA02682 155 TPKPAPAakpiflhNQLPPPDYPAASCPTIE 185
|
|
| PspC_subgroup_1 |
NF033838 |
pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, ... |
442-506 |
4.50e-04 |
|
pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A. The other form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site.
Pssm-ID: 468201 [Multi-domain] Cd Length: 684 Bit Score: 43.46 E-value: 4.50e-04
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 15235186 442 VPTTPVQKPSPVPTTPVQKPSPVPTTPVHEPSPvlATPVD--------KPSPVPSRPVQKPQPPK--ESPQPDDP 506
Cdd:NF033838 412 VKEKPAEQPQPAPAPQPEKPAPKPEKPAEQPKA--EKPADqqaeedyaRRSEEEYNRLTQQQPPKteKPAQPSTP 484
|
|
| TALPID3 |
pfam15324 |
Hedgehog signalling target; TALPID3 is a family of eukaryotic proteins that are targets for ... |
422-511 |
5.91e-04 |
|
Hedgehog signalling target; TALPID3 is a family of eukaryotic proteins that are targets for Hedgehog signalling. Mutations in this gene noticed first in chickens lead to multiple abnormalities of development.
Pssm-ID: 434634 [Multi-domain] Cd Length: 1288 Bit Score: 43.34 E-value: 5.91e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15235186 422 PSPVHKPTPVPTTPVHKPTPVPtTPVQKPSPVPTTPVQKPSPVPT------------TPVHEPSP-----------VLAT 478
Cdd:pfam15324 968 PVAASVPGDLPTKETLLPTPVP-TPQPTPPCSPPSPLKEPSPVKTpdsspcvsehdfFPVKEIPPekgadtgpavsLVIT 1046
|
90 100 110
....*....|....*....|....*....|...
gi 15235186 479 PVDKPSPVPsRPVQKPQPPKESPQPDDPYDQSP 511
Cdd:pfam15324 1047 PTVTPIATP-PPAATPTPPLSENSIDKLKSPSP 1078
|
|
| PHA03369 |
PHA03369 |
capsid maturational protease; Provisional |
417-509 |
5.91e-04 |
|
capsid maturational protease; Provisional
Pssm-ID: 223061 [Multi-domain] Cd Length: 663 Bit Score: 43.06 E-value: 5.91e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15235186 417 STPSKPSPVHKPTPVPTTPVHKPTPVPTTP--VQKPSPVPTTPVQKPSPVPTTPvhePSPVLATPVDKPSPVPSRPVQ-- 492
Cdd:PHA03369 349 KTASLTAPSRVLAAAAKVAVIAAPQTHTGPadRQRPQRPDGIPYSVPARSPMTA---YPPVPQFCGDPGLVSPYNPQSpg 425
|
90 100
....*....|....*....|.
gi 15235186 493 --KPQPPKES--PQPDDPYDQ 509
Cdd:PHA03369 426 tsYGPEPVGPvpPQPTNPYVM 446
|
|
| PRK14954 |
PRK14954 |
DNA polymerase III subunits gamma and tau; Provisional |
428-503 |
6.28e-04 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 184918 [Multi-domain] Cd Length: 620 Bit Score: 43.01 E-value: 6.28e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15235186 428 PTPVPTTPVHKPTPvpttPVQKPSPVPTTPVQKPSPVPTTPVHEPSPVLAT------PVDKPSPVPSRPVQKPQPPKESP 501
Cdd:PRK14954 382 PSPAGSPDVKKKAP----EPDLPQPDRHPGPAKPEAPGARPAELPSPASAPtpeqqpPVARSAPLPPSPQASAPRNVASG 457
|
..
gi 15235186 502 QP 503
Cdd:PRK14954 458 KP 459
|
|
| 2A1904 |
TIGR00927 |
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying ... |
436-516 |
6.90e-04 |
|
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273344 [Multi-domain] Cd Length: 1096 Bit Score: 43.06 E-value: 6.90e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15235186 436 VHKPTPVPTTPVQ-KPSPVPTTPVQ-----KPSPV-PTTPvhepSPVLATPVDKPSPVPSRPVQKPQPPKESPQPDDPYD 508
Cdd:TIGR00927 370 EKNPSTAPSTPATpRVRAVLTTQVHhcvvvKPAPAvPTTP----SPSLTTALFPEAPSPSPSALPPGQPDLHPKAEYPPD 445
|
....*...
gi 15235186 509 QSPVTKRR 516
Cdd:TIGR00927 446 LFSVEERR 453
|
|
| PRK11633 |
PRK11633 |
cell division protein DedD; Provisional |
417-498 |
7.72e-04 |
|
cell division protein DedD; Provisional
Pssm-ID: 236940 [Multi-domain] Cd Length: 226 Bit Score: 41.53 E-value: 7.72e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15235186 417 STPSKPSP-----VHKPTPVPttPVHKPTPVPTTPVQ-KPSPVPTTPVqKPSPVPTTPVHEPSPVLATPVDKPSPVPSRP 490
Cdd:PRK11633 62 ALPTQPPEgaaeaVRAGDAAA--PSLDPATVAPPNTPvEPEPAPVEPP-KPKPVEKPKPKPKPQQKVEAPPAPKPEPKPV 138
|
....*...
gi 15235186 491 VQKPQPPK 498
Cdd:PRK11633 139 VEEKAAPT 146
|
|
| DUF3729 |
pfam12526 |
Protein of unknown function (DUF3729); This family of proteins is found in viruses. Proteins ... |
413-502 |
7.83e-04 |
|
Protein of unknown function (DUF3729); This family of proteins is found in viruses. Proteins in this family are typically between 145 and 1707 amino acids in length. The family is found in association with pfam01443, pfam01661, pfam05417, pfam01660, pfam00978. There is a single completely conserved residue L that may be functionally important.
Pssm-ID: 372164 [Multi-domain] Cd Length: 115 Bit Score: 39.68 E-value: 7.83e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15235186 413 AGGSSTPSKPSPVH---KPTPVPTTPVHKPTPVPTTPVQKPSPVPTTPVqkPSPVPTTPVHEPSPvlatpvdKPSPV-PS 488
Cdd:pfam12526 23 SGFSSCFSPPESAHpdpPPPVGDPRPPVVDTPPPVSAVWVLPPPSEPAA--PEPDLVPPVTGPAG-------PPSPLaPP 93
|
90
....*....|....
gi 15235186 489 RPVQKPQPPKESPQ 502
Cdd:pfam12526 94 APAQKPPLPPPRPQ 107
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
360-508 |
7.87e-04 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 42.78 E-value: 7.87e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15235186 360 FSGQGGSCVPGGSRKEIALDDTRNCLASRPEQRSAQECAVVINRPVdcskdkcaggsstpSKPSPVHKPTPVPTTPVHKP 439
Cdd:PRK14951 364 FKPAAAAEAAAPAEKKTPARPEAAAPAAAPVAQAAAAPAPAAAPAA--------------AASAPAAPPAAAPPAPVAAP 429
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 15235186 440 TPVPTTPVQKPSPVPTtPVQKPSPVPTTPVHEPSPVLATPvdKPSPVPSRPVQKPQPPKESPQPDDPYD 508
Cdd:PRK14951 430 AAAAPAAAPAAAPAAV-ALAPAPPAQAAPETVAIPVRVAP--EPAVASAAPAPAAAPAAARLTPTEEGD 495
|
|
| PHA02682 |
PHA02682 |
ORF080 virion core protein; Provisional |
419-503 |
8.18e-04 |
|
ORF080 virion core protein; Provisional
Pssm-ID: 177464 [Multi-domain] Cd Length: 280 Bit Score: 41.77 E-value: 8.18e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15235186 419 PSKPSPVHKPTPVPTTPVHKPTPVPTTP---VQKPSPVPTTPvqkPSPVPTTPVHEPSPVLATPVdkPSPVPSRPVQKPQ 495
Cdd:PHA02682 76 PSGQSPLAPSPACAAPAPACPACAPAAPapaVTCPAPAPACP---PATAPTCPPPAVCPAPARPA--PACPPSTRQCPPA 150
|
....*...
gi 15235186 496 PPKESPQP 503
Cdd:PHA02682 151 PPLPTPKP 158
|
|
| PRK04654 |
PRK04654 |
sec-independent translocase; Provisional |
423-496 |
8.90e-04 |
|
sec-independent translocase; Provisional
Pssm-ID: 135173 [Multi-domain] Cd Length: 214 Bit Score: 41.34 E-value: 8.90e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15235186 423 SPVHKPTPVPTTPVHKPTPVPTTPVQKPSPVP---TTPVQKPSPVPTTPVhepSPVLATPVD---KPSPVPSRP--VQKP 494
Cdd:PRK04654 136 GQAHTPVPAPAPVIAQAQPIAPAPHQTLVPAPhdtIVPAPHAAHLPSAPA---TPVSVAPVDagtSASPTPSEPtkIQEK 212
|
..
gi 15235186 495 QP 496
Cdd:PRK04654 213 QP 214
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
414-501 |
1.00e-03 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 42.62 E-value: 1.00e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15235186 414 GGSSTPSKPSPVHKPTPVPTTPvHKPTPVPTTPvQKPSPV--------PTTPVQKPSPVPTTPVHEPSPVLATPVDKPSP 485
Cdd:PHA03247 400 GGDDQTRPAAPVPASVPTPAPT-PVPASAPPPP-ATPLPSaepgsddgPAPPPERQPPAPATEPAPDDPDDATRKALDAL 477
|
90
....*....|....*.
gi 15235186 486 VPSRPvqkPQPPKESP 501
Cdd:PHA03247 478 RERRP---PEPPGADL 490
|
|
| Not5 |
COG5665 |
CCR4-NOT transcriptional regulation complex, NOT5 subunit [Transcription]; |
410-510 |
1.04e-03 |
|
CCR4-NOT transcriptional regulation complex, NOT5 subunit [Transcription];
Pssm-ID: 444384 [Multi-domain] Cd Length: 874 Bit Score: 42.34 E-value: 1.04e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15235186 410 DKCAGGSSTPSKPSPVHKPTPVPTTPVHKPTPVPTTPVQKPSPVPTTPVQKPSPV--PTTPVHEPSPvlATPVDKP---- 483
Cdd:COG5665 308 DTASGNPSAPSVLINSDSPTSEDPATASVPTTEETTAFTTPSSVPSTPAEKDTPAtdLATPVSPTPP--ETSVDKKvspd 385
|
90 100 110
....*....|....*....|....*....|....
gi 15235186 484 SPVPSRPVQK-------PQPPKESPQPDDPYDQS 510
Cdd:COG5665 386 SATSSTKSEKeggtassPMPPNIAIGAKDDVDAT 419
|
|
| PRK13042 |
PRK13042 |
superantigen-like protein SSL4; Reviewed; |
413-498 |
1.06e-03 |
|
superantigen-like protein SSL4; Reviewed;
Pssm-ID: 183854 [Multi-domain] Cd Length: 291 Bit Score: 41.54 E-value: 1.06e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15235186 413 AGGSSTPSKPSPVHKPTPVPTTPVHKPTPVP--TTPvqkPSPVPTTPvqKPSPVPTTPVhepspvlATPVDKPSPVPSRP 490
Cdd:PRK13042 27 AANATTPSSTKVEAPQSTPPSTKVEAPQSKPnaTTP---PSTKVEAP--QQTPNATTPS-------STKVETPQSPTTKQ 94
|
....*...
gi 15235186 491 VQKPQPPK 498
Cdd:PRK13042 95 VPTEINPK 102
|
|
| rad23 |
TIGR00601 |
UV excision repair protein Rad23; All proteins in this family for which functions are known ... |
408-479 |
1.17e-03 |
|
UV excision repair protein Rad23; All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 273167 [Multi-domain] Cd Length: 378 Bit Score: 41.80 E-value: 1.17e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 15235186 408 SKDKCAGGSSTPSKPSPVHKPTPVPTTPVhkptpvptTPVQKPSPVPTTPVQKPSPVPTTPvhePSPVLATP 479
Cdd:TIGR00601 75 SKPKTGTGKVAPPAATPTSAPTPTPSPPA--------SPASGMSAAPASAVEEKSPSEESA---TATAPESP 135
|
|
| PHA03377 |
PHA03377 |
EBNA-3C; Provisional |
408-504 |
1.21e-03 |
|
EBNA-3C; Provisional
Pssm-ID: 177614 [Multi-domain] Cd Length: 1000 Bit Score: 42.35 E-value: 1.21e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15235186 408 SKDKCAGGSSTPSKPSPVHKPTPVPTTPVHKPTPVPTTPVQKPSPVPTTPVQKPSP---VPTTPVHEPSPVLATPvdkPS 484
Cdd:PHA03377 814 SQYPGHGHPQGPWAPRPPHLPPQWDGSAGHGQDQVSQFPHLQSETGPPRLQLSQVPqlpYSQTLVSSSAPSWSSP---QP 890
|
90 100
....*....|....*....|
gi 15235186 485 PVPSRPVQKPQPPKESPQPD 504
Cdd:PHA03377 891 RAPIRPIPTRFPPPPMPLQD 910
|
|
| PLN03150 |
PLN03150 |
hypothetical protein; Provisional |
111-226 |
1.27e-03 |
|
hypothetical protein; Provisional
Pssm-ID: 178695 [Multi-domain] Cd Length: 623 Bit Score: 42.11 E-value: 1.27e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15235186 111 WHG----PHVCGYTGVVCApaLDDSDVT-VVAGVDLNGADIAGHLPAELGLMTDVAMFHLNSNRFCGIIPKSFEKLKLMH 185
Cdd:PLN03150 392 WNGdpcvPQQHPWSGADCQ--FDSTKGKwFIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLE 469
|
90 100 110 120
....*....|....*....|....*....|....*....|.
gi 15235186 186 EFDVSNNRFVGPFPNVVLSWPDVKYFDLRFNDFEGQVPPEL 226
Cdd:PLN03150 470 VLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRVPAAL 510
|
|
| PHA03369 |
PHA03369 |
capsid maturational protease; Provisional |
413-503 |
1.53e-03 |
|
capsid maturational protease; Provisional
Pssm-ID: 223061 [Multi-domain] Cd Length: 663 Bit Score: 41.91 E-value: 1.53e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15235186 413 AGGSSTPSKPSPVHKPTPVPTTPVHKPTPVPTTPvqkPSPVPTTPVQKPSPVPTTPVHEPSPVLATPVDKPSPVPSRPVQ 492
Cdd:PHA03369 369 IAAPQTHTGPADRQRPQRPDGIPYSVPARSPMTA---YPPVPQFCGDPGLVSPYNPQSPGTSYGPEPVGPVPPQPTNPYV 445
|
90
....*....|....*.
gi 15235186 493 KP-----QPPKESPQP 503
Cdd:PHA03369 446 MPismanMVYPGHPQE 461
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
386-549 |
1.58e-03 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 42.23 E-value: 1.58e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15235186 386 ASRPEQRSAQECAVVINRPVDCSKDKCAGGSSTPSKPSPVHKPTPVPTTPVHKPTPVPTTPVQKPSPVPT---------- 455
Cdd:PHA03247 2783 LTRPAVASLSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPPGPPPPSLPLggsvapggdv 2862
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15235186 456 ---TPVQKPSPVPTTPVHEPSPVLATPVDKPSPVP-SRPVQKPQPPKESPQPDDPYDQSPvtkrrspppapvnsppppvy 531
Cdd:PHA03247 2863 rrrPPSRSPAAKPAAPARPPVRRLARPAVSRSTESfALPPDQPERPPQPQAPPPPQPQPQ-------------------- 2922
|
170
....*....|....*...
gi 15235186 532 spppppppvhspPPPVHS 549
Cdd:PHA03247 2923 ------------PPPPPQ 2928
|
|
| PHA03379 |
PHA03379 |
EBNA-3A; Provisional |
415-506 |
1.88e-03 |
|
EBNA-3A; Provisional
Pssm-ID: 223066 [Multi-domain] Cd Length: 935 Bit Score: 41.58 E-value: 1.88e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15235186 415 GSSTPSKPSPVHKPTPVPTTPVH--KPTPV---PTTPVQKPSP------VPTTPVQKPSPVP--TTPVHEP-------SP 474
Cdd:PHA03379 438 GSAQVPEPPPVHDLEPGPLHDQHsmAPCPVaqlPPGPLQDLEPgdqlpgVVQDGRPACAPVPapAGPIVRPweaslsqVP 517
|
90 100 110
....*....|....*....|....*....|..
gi 15235186 475 VLATPVDKPSPVPSRPVQKPQPPKESPQPDDP 506
Cdd:PHA03379 518 GVAFAPVMPQPMPVEPVPVPTVALERPVCPAP 549
|
|
| PRK14948 |
PRK14948 |
DNA polymerase III subunit gamma/tau; |
425-511 |
2.40e-03 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237862 [Multi-domain] Cd Length: 620 Bit Score: 41.10 E-value: 2.40e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15235186 425 VHKPTPVPTTPVHKPT--PVPTTPVQKPSPVPTTPVQKPSPVPTTPVHEPSPVLATPVDKPSPVPsrpvqkPQPPKESPQ 502
Cdd:PRK14948 512 SQSGSASNTAKTPPPPqkSPPPPAPTPPLPQPTATAPPPTPPPPPPTATQASSNAPAQIPADSSP------PPPIPEEPT 585
|
....*....
gi 15235186 503 PDDPYDQSP 511
Cdd:PRK14948 586 PSPTKDSSP 594
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
277-336 |
2.52e-03 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 36.73 E-value: 2.52e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|
gi 15235186 277 NLNEIVFMDNDLGGCFPSEIGKLSNVTVFDASKNSFIGRLPTSFVGLTSVEEIDISGNKL 336
Cdd:pfam13855 2 NLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
|
|
| PspC_subgroup_1 |
NF033838 |
pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, ... |
464-509 |
2.78e-03 |
|
pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A. The other form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site.
Pssm-ID: 468201 [Multi-domain] Cd Length: 684 Bit Score: 41.15 E-value: 2.78e-03
10 20 30 40
....*....|....*....|....*....|....*....|....*.
gi 15235186 464 VPTTPVHEPSPVlatpvdkPSPVPSRPVQKPQPPKESPQPDDPYDQ 509
Cdd:NF033838 412 VKEKPAEQPQPA-------PAPQPEKPAPKPEKPAEQPKAEKPADQ 450
|
|
| PHA03379 |
PHA03379 |
EBNA-3A; Provisional |
413-502 |
3.35e-03 |
|
EBNA-3A; Provisional
Pssm-ID: 223066 [Multi-domain] Cd Length: 935 Bit Score: 40.81 E-value: 3.35e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15235186 413 AGGSSTPSKPSPVHKP--TPVPTTPVH---KPTPVPTTPVQKP-SPVP-----TTPVQKPSPVPTTPVHEPSPVLATPVD 481
Cdd:PHA03379 502 AGPIVRPWEASLSQVPgvAFAPVMPQPmpvEPVPVPTVALERPvCPAPpliamQGPGETSGIVRVRERWRPAPWTPNPPR 581
|
90 100 110
....*....|....*....|....*....|....*...
gi 15235186 482 KPSPVPSR-----------------PVQKPQPPKESPQ 502
Cdd:PHA03379 582 SPSQMSVRdrlarlraeaqpyqasvEVQPPQLTQVSPQ 619
|
|
| PRK14971 |
PRK14971 |
DNA polymerase III subunit gamma/tau; |
415-514 |
3.40e-03 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237874 [Multi-domain] Cd Length: 614 Bit Score: 40.53 E-value: 3.40e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15235186 415 GSSTPSKPSPVHKPTPVPTTPVHKPTPVPTTPVQKPSPVPTT-PVQKPSPVPTTPVHEPSPVLATPVDKP------SPVP 487
Cdd:PRK14971 385 QPAAAPQPSAAAAASPSPSQSSAAAQPSAPQSATQPAGTPPTvSVDPPAAVPVNPPSTAPQAVRPAQFKEekkipvSKVS 464
|
90 100 110
....*....|....*....|....*....|
gi 15235186 488 S--RPVQKP-QPPKESPQPDDPYDQSPVTK 514
Cdd:PRK14971 465 SlgPSTLRPiQEKAEQATGNIKEAPTGTQK 494
|
|
| PHA03379 |
PHA03379 |
EBNA-3A; Provisional |
422-498 |
3.47e-03 |
|
EBNA-3A; Provisional
Pssm-ID: 223066 [Multi-domain] Cd Length: 935 Bit Score: 40.81 E-value: 3.47e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 15235186 422 PSPVHKPTPVPTtpvhkPTPVPTTPVQKPSPVPTTPVQKPSPVPttpvHEPSPVLATPVDKPSPVPSRPVqKPQPPK 498
Cdd:PHA03379 485 PGVVQDGRPACA-----PVPAPAGPIVRPWEASLSQVPGVAFAP----VMPQPMPVEPVPVPTVALERPV-CPAPPL 551
|
|
| PRK11633 |
PRK11633 |
cell division protein DedD; Provisional |
430-511 |
4.06e-03 |
|
cell division protein DedD; Provisional
Pssm-ID: 236940 [Multi-domain] Cd Length: 226 Bit Score: 39.22 E-value: 4.06e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15235186 430 PVPTTPVHKPT-----PVPTTPVQKPSPVPTTPVQ-KPSPVPTTPvhePSPvlaTPVDKPSPVPSRPVQKPQPPKESPQP 503
Cdd:PRK11633 62 ALPTQPPEGAAeavraGDAAAPSLDPATVAPPNTPvEPEPAPVEP---PKP---KPVEKPKPKPKPQQKVEAPPAPKPEP 135
|
....*...
gi 15235186 504 DDPYDQSP 511
Cdd:PRK11633 136 KPVVEEKA 143
|
|
| DedD |
COG3147 |
Cell division protein DedD (periplasmic protein involved in septation) [Cell cycle control, ... |
416-474 |
4.11e-03 |
|
Cell division protein DedD (periplasmic protein involved in septation) [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442381 [Multi-domain] Cd Length: 140 Bit Score: 38.22 E-value: 4.11e-03
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*....
gi 15235186 416 SSTPSKPSPVHKPTPVPTTPVHKPTPVPTtpvqkpsPVPTTPVQKPSPVPTTPVHEPSP 474
Cdd:COG3147 12 AAAPAAPAAAAAPAPAAAAAAAAPKPAAK-------PAAPKPAAAAAAAPAAKAAAPAG 63
|
|
| DUF4045 |
pfam13254 |
Domain of unknown function (DUF4045); This presumed domain is functionally uncharacterized. ... |
372-497 |
4.16e-03 |
|
Domain of unknown function (DUF4045); This presumed domain is functionally uncharacterized. This domain family is found in bacteria and eukaryotes, and is typically between 384 and 430 amino acids in length.
Pssm-ID: 433066 [Multi-domain] Cd Length: 415 Bit Score: 40.15 E-value: 4.16e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15235186 372 SRKEIALDDTRNCLASRPEQRSAQECAVVINRPVDCSKDKcAGGSSTPSKPSPVHKPTPVPTT-----PVHKPTPVPTTP 446
Cdd:pfam13254 195 GRPNSFKEVTPVGLMRSPAPGGHSKSPSVSGISADSSPTK-EEPSEEADTLSTDKEQSPAPTSaseppPKTKELPKDSEE 273
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 15235186 447 VQKPSPVPTTPVQKP------SPVPTTPVHEP---SPVLATPVDKPSPVPSR----PVQKPQPP 497
Cdd:pfam13254 274 PAAPSKSAEASTEKKepdtesSPETSSEKSAPsllSPVSKASIDKPLSSPDRdplsPKPKPQSP 337
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
413-511 |
4.30e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 40.35 E-value: 4.30e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15235186 413 AGGSSTPSKPSPVH---KPTPVPTTPVHKPTPVPTTPVQKPSPVPTTPVQKPSPVPTTPVHEPSPVL---ATPVDKPSPV 486
Cdd:PRK07764 390 GAGAPAAAAPSAAAaapAAAPAPAAAAPAAAAAPAPAAAPQPAPAPAPAPAPPSPAGNAPAGGAPSPppaAAPSAQPAPA 469
|
90 100
....*....|....*....|....*
gi 15235186 487 PSRPVQKPQPPKESPQPDDPYDQSP 511
Cdd:PRK07764 470 PAAAPEPTAAPAPAPPAAPAPAAAP 494
|
|
| COG5373 |
COG5373 |
Uncharacterized membrane protein [Function unknown]; |
416-475 |
5.09e-03 |
|
Uncharacterized membrane protein [Function unknown];
Pssm-ID: 444140 [Multi-domain] Cd Length: 854 Bit Score: 40.37 E-value: 5.09e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 15235186 416 SSTPSKPSPVHKPTPVPTTPVHKPTPVPTTPVQKPSPVPT-TPVQKPSPVPTTPVHEPSPV 475
Cdd:COG5373 44 ASAPAEPEPEAAAAATAAAPEAAPAPVPEAPAAPPAAAEApAPAAAAPPAEAEPAAAPAAA 104
|
|
| DedD |
COG3147 |
Cell division protein DedD (periplasmic protein involved in septation) [Cell cycle control, ... |
428-498 |
5.12e-03 |
|
Cell division protein DedD (periplasmic protein involved in septation) [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442381 [Multi-domain] Cd Length: 140 Bit Score: 37.83 E-value: 5.12e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 15235186 428 PTPVPTTPVHKPTPVPTTPVQKPSPVPTTPVQKPSPVPTtpvhepsPVLATPVDKPSPVPSRPVQKPQPPK 498
Cdd:COG3147 2 AEEAAAAPAAAAAPAAPAAAAAPAPAAAAAAAAPKPAAK-------PAAPKPAAAAAAAPAAKAAAPAGGG 65
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
386-531 |
5.15e-03 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 40.24 E-value: 5.15e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15235186 386 ASRPEQRSAQECAVVINRPVDCSKDKCAGGSSTPSKPSPVHKPTPVPTTPVHKPTPVPTTPVQKPSPVPTTPVQKPSPVP 465
Cdd:PRK12323 414 AAARAVAAAPARRSPAPEALAAARQASARGPGGAPAPAPAPAAAPAAAARPAAAGPRPVAAAAAAAPARAAPAAAPAPAD 493
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 15235186 466 --TTPVHEPSPVLATPVDKPSPVPSRPVQKPQPPKESPQPDDPYDQSPVTKRRSPPPAPVNSPPPPVY 531
Cdd:PRK12323 494 ddPPPWEELPPEFASPAPAQPDAAPAGWVAESIPDPATADPDDAFETLAPAPAAAPAPRAAAATEPVV 561
|
|
| half-pint |
TIGR01645 |
poly-U binding splicing factor, half-pint family; The proteins represented by this model ... |
408-513 |
5.74e-03 |
|
poly-U binding splicing factor, half-pint family; The proteins represented by this model contain three RNA recognition motifs (rrm: pfam00076) and have been characterized as poly-pyrimidine tract binding proteins associated with RNA splicing factors. In the case of PUF60 (GP|6176532), in complex with p54, and in the presence of U2AF, facilitates association of U2 snRNP with pre-mRNA.
Pssm-ID: 130706 [Multi-domain] Cd Length: 612 Bit Score: 40.05 E-value: 5.74e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15235186 408 SKDKCAGGSS-TPSKPSPVHKPTPVPTTPVHKPtpVPTTPVQKPSPVPTTPVQKPSPVPTTPVHEPSPV----LATPVDK 482
Cdd:TIGR01645 314 AAEAVAGAAVlGPRAQSPATPSSSLPTDIGNKA--VVSSAKKEAEEVPPLPQAAPAVVKPGPMEIPTPVpppgLAIPSLV 391
|
90 100 110
....*....|....*....|....*....|.
gi 15235186 483 PSPVPSRPVQKPQPPKESPQPDDPYDQSPVT 513
Cdd:TIGR01645 392 APPGLVAPTEINPSFLASPRKKMKREKLPVT 422
|
|
| PRK10856 |
PRK10856 |
cytoskeleton protein RodZ; |
415-497 |
5.82e-03 |
|
cytoskeleton protein RodZ;
Pssm-ID: 236776 [Multi-domain] Cd Length: 331 Bit Score: 39.62 E-value: 5.82e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15235186 415 GSSTPSKPSPvhkPTPVPTTPVHKPTPVPTTPVQKPSPVPTTPVQKPSPVPTTPVHEPSPVLATPVDKPSPVPSRPVQKP 494
Cdd:PRK10856 169 TTDPATTPAP---AAPVDTTPTNSQTPAVATAPAPAVDPQQNAVVAPSQANVDTAATPAPAAPATPDGAAPLPTDQAGVS 245
|
...
gi 15235186 495 QPP 497
Cdd:PRK10856 246 TPA 248
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
414-503 |
6.06e-03 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 39.86 E-value: 6.06e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15235186 414 GGSSTPSKPS--PVHKPTPV---PTTPVHKPTPVPTTPVQKPSPVPTTPVQK---------------------------- 460
Cdd:PRK12323 369 GGGAGPATAAaaPVAQPAPAaaaPAAAAPAPAAPPAAPAAAPAAAAAARAVAaaparrspapealaaarqasargpggap 448
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|
gi 15235186 461 -------PSPVPTTPVHEPSPVLATPVDKPSPVPSRPVQKPQPPKESPQP 503
Cdd:PRK12323 449 apapapaAAPAAAARPAAAGPRPVAAAAAAAPARAAPAAAPAPADDDPPP 498
|
|
| PLN03209 |
PLN03209 |
translocon at the inner envelope of chloroplast subunit 62; Provisional |
415-507 |
6.50e-03 |
|
translocon at the inner envelope of chloroplast subunit 62; Provisional
Pssm-ID: 178748 [Multi-domain] Cd Length: 576 Bit Score: 39.52 E-value: 6.50e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15235186 415 GSSTPSKPSPVHKPTPVPTTPVHKPTPVPTTPVQKPSPVPTTPVQKP--SPVPTTPVHEPSPVLATPV---DKPSPVPSR 489
Cdd:PLN03209 403 AVAKPAEPDVVPSPGSASNVPEVEPAQVEAKKTRPLSPYARYEDLKPptSPSPTAPTGVSPSVSSTSSvpaVPDTAPATA 482
|
90
....*....|....*...
gi 15235186 490 PVQKPQPPKESPQPDDPY 507
Cdd:PLN03209 483 ATDAAAPPPANMRPLSPY 500
|
|
| PRK10819 |
PRK10819 |
transport protein TonB; Provisional |
418-506 |
6.61e-03 |
|
transport protein TonB; Provisional
Pssm-ID: 236768 [Multi-domain] Cd Length: 246 Bit Score: 38.90 E-value: 6.61e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15235186 418 TPSKPSPVHKPTPVPTTPVHKPTPVPTtPVQKPSPVPTtPVqkPSPVPTTPVHEPSPVLA-TPVDKPSPVPSRPVQ-KPQ 495
Cdd:PRK10819 43 APAQPISVTMVAPADLEPPQAVQPPPE-PVVEPEPEPE-PI--PEPPKEAPVVIPKPEPKpKPKPKPKPKPVKKVEeQPK 118
|
90
....*....|.
gi 15235186 496 PPKESPQPDDP 506
Cdd:PRK10819 119 REVKPVEPRPA 129
|
|
| PRK08691 |
PRK08691 |
DNA polymerase III subunits gamma and tau; Validated |
382-508 |
6.87e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236333 [Multi-domain] Cd Length: 709 Bit Score: 39.69 E-value: 6.87e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15235186 382 RNCLASRPEQRSAQECAVVinrPVDCSKDKCAGGSSTPSKPS--------PVHKPTPVPTTPVHKPTPVPTTPVQKPSPV 453
Cdd:PRK08691 387 KETAAKKPQPRPEAETAQT---PVQTASAAAMPSEGKTAGPVsnqenndvPPWEDAPDEAQTAAGTAQTSAKSIQTASEA 463
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 15235186 454 PTTPVQKPSP---------VPTTPVHEPSPVLATPVDKPSPVPSRPVQKPQPPKESPQ-PDDPYD 508
Cdd:PRK08691 464 ETPPENQVSKnkaadnetdAPLSEVPSENPIQATPNDEAVETETFAHEAPAEPFYGYGfPDNDCP 528
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
367-543 |
7.05e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 39.58 E-value: 7.05e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15235186 367 CVPGGSRKEIALDDTRNCLASRPEQRSAQECAVviNRPVDCSKDKCAGGSSTPSKPSPVHKPTPVPTTPVHKPTPVPTtP 446
Cdd:PRK07764 586 AVVGPAPGAAGGEGPPAPASSGPPEEAARPAAP--AAPAAPAAPAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPD-A 662
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15235186 447 VQKPSPVPTTPVQKPSPVPTTPVHEPSPVLATPVDKPSPVPSRPVQKPQPPKESPQPDDPYDQSPVTKRRSPPPAPVNSP 526
Cdd:PRK07764 663 SDGGDGWPAKAGGAAPAAPPPAPAPAAPAAPAGAAPAQPAPAPAATPPAGQADDPAAQPPQAAQGASAPSPAADDPVPLP 742
|
170
....*....|....*..
gi 15235186 527 PPPVYSPPPPPPPVHSP 543
Cdd:PRK07764 743 PEPDDPPDPAGAPAQPP 759
|
|
| ECM1 |
pfam05782 |
Extracellular matrix protein 1 (ECM1); This family consists of several eukaryotic ... |
413-501 |
7.30e-03 |
|
Extracellular matrix protein 1 (ECM1); This family consists of several eukaryotic extracellular matrix protein 1 (ECM1) sequences. ECM1 has been shown to regulate endochondral bone formation, stimulate the proliferation of endothelial cells and induce angiogenesis. Mutations in the ECM1 gene can cause lipoid proteinosis, a disorder which causes generalized thickening of skin, mucosae and certain viscera. Classical features include beaded eyelid papules and laryngeal infiltration leading to hoarseness.
Pssm-ID: 461739 Cd Length: 518 Bit Score: 39.44 E-value: 7.30e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15235186 413 AGGSSTPSKPSPVHKPTPVPTTPVHKPTPVPTTPVQKPSPVPTTPVQKPSPVPttpvhePSPVLATPVDKPSPVPSRPVQ 492
Cdd:pfam05782 1 VGYAAPPSPPQTRGLPVDHPDTSQHDPPFEGQSEVQPPPSQEAIPVQEEELPP------PQLPVEKKVDPPLPQEAIPLQ 74
|
....*....
gi 15235186 493 KPQPPKESP 501
Cdd:pfam05782 75 EELPPPQLP 83
|
|
| PHA01929 |
PHA01929 |
putative scaffolding protein |
422-501 |
7.58e-03 |
|
putative scaffolding protein
Pssm-ID: 177328 Cd Length: 306 Bit Score: 38.88 E-value: 7.58e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15235186 422 PSPVHKPTPVPTTPVHKPTPVP----TTPVQKPSPVPTTPVQkPSPVPTTPVhEPSPVLATPvdkPSPVPSRPVQKPQPP 497
Cdd:PHA01929 25 PTPQPNPVIQPQAPVQPGQPGApqqlAIPTQQPQPVPTSAMT-PHVVQQAPA-QPAPAAPPA---AGAALPEALEVPPPP 99
|
....
gi 15235186 498 KESP 501
Cdd:PHA01929 100 AFTP 103
|
|
| CytochromB561_N |
pfam09786 |
Cytochrome B561, N terminal; Members of this family are found in the N terminal region of ... |
417-516 |
8.08e-03 |
|
Cytochrome B561, N terminal; Members of this family are found in the N terminal region of cytochrome B561, as well as in various other putative uncharacterized proteins.
Pssm-ID: 462899 Cd Length: 579 Bit Score: 39.42 E-value: 8.08e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15235186 417 STPSKPSPVHKPTPVPTTPVHKPTPVPTTPVQKPSPVPTTPVQKPSPVPTTPVHEPSPVLATPV----DKPSPVPSRPVQ 492
Cdd:pfam09786 123 TTHRKKPPKSKSSPQSPSPVLVPLHQSVSPSSSESRKGGDKSPAGSGKKLRSFSTSSKSPASPSvylrGSPVPLNSSPLP 202
|
90 100
....*....|....*....|....*..
gi 15235186 493 KPQPPKESPQ---PDDPYDQSPVTKRR 516
Cdd:pfam09786 203 SDRNYENSVQsspEIDSAVSTPWSRKR 229
|
|
| PRK14948 |
PRK14948 |
DNA polymerase III subunit gamma/tau; |
416-510 |
8.18e-03 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237862 [Multi-domain] Cd Length: 620 Bit Score: 39.56 E-value: 8.18e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15235186 416 SSTPSKPSPVHKPTPVPTTPVHKPTPVPTTPVQK-PSPVPTTpvqkPSPVPTTPVHEPSPVLatpvdKPSPVPSRPVQKP 494
Cdd:PRK14948 518 SNTAKTPPPPQKSPPPPAPTPPLPQPTATAPPPTpPPPPPTA----TQASSNAPAQIPADSS-----PPPPIPEEPTPSP 588
|
90
....*....|....*.
gi 15235186 495 QPPKEspqpDDPYDQS 510
Cdd:PRK14948 589 TKDSS----PEEIDKA 600
|
|
| PHA03291 |
PHA03291 |
envelope glycoprotein I; Provisional |
402-505 |
9.25e-03 |
|
envelope glycoprotein I; Provisional
Pssm-ID: 223033 [Multi-domain] Cd Length: 401 Bit Score: 39.17 E-value: 9.25e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15235186 402 NRPVDCSKDKCAGGSSTPSKPSPVHKPTpVPTTPVHKPTPVPTTPVqKPSPVPTTPVQKPSPVPTTPVHEPSPVLATPVD 481
Cdd:PHA03291 179 EGSADGSCDPALPLSAPRLGPADVFVPA-TPRPTPRTTASPETTPT-PSTTTSPPSTTIPAPSTTIAAPQAGTTPEAEGT 256
|
90 100
....*....|....*....|....
gi 15235186 482 KPSPVPSrpVQKPQPPKESPQPDD 505
Cdd:PHA03291 257 PAPPTPG--GGEAPPANATPAPEA 278
|
|
| |
