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Pectin lyase-like superfamily protein [Arabidopsis thaliana]
Protein Classification
glycoside hydrolase family 28 protein ( domain architecture ID 11475089 )
glycoside hydrolase family 28 protein hydrolyzes the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety
List of domain hits
Name
Accession
Description
Interval
E-value
Pgu1
COG5434 Polygalacturonase [Carbohydrate transport and metabolism];
65-433
8.74e-124
Polygalacturonase [Carbohydrate transport and metabolism];
Pssm-ID: 444185 [Multi-domain]
Cd Length: 373
Bit Score: 365.30
E-value: 8.74e-124
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22329119 65 P FP NRIV m S ITDFG GV GDGKT S NTAA FRR A VRHL egf AA E GG AQLN VP E GT W L S G SFN L T SN F TL F LE R GA LI LGS K D LD 144
Cdd:COG5434 4 S FP AKTF - N ITDFG AK GDGKT L NTAA IQK A IDAC --- AA A GG GTVL VP A GT Y L T G PIF L K SN V TL H LE K GA TL LGS T D PA 79
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22329119 145 EW P II E PLPSY G RGRE rpggr HIS LI HGD N LT N VV ITGE n GTIDG Q G KM WW EL -------- W WNRTLVHT - R GH LI E LKN 215
Cdd:COG5434 80 DY P LV E TRWEG G ELKG ----- YSA LI YAE N AE N IA ITGE - GTIDG N G DA WW PW kkearqsg W VPVGAYDY l R PR LI Q LKN 153
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22329119 216 SH N I L ISNL TL L NSPFWTIHP VY C S NV VIRNM TI LA P MN APNTDGIDPDS ST NV C IE D CYI ES GDD LV A V KSG W D QY G MA 295
Cdd:COG5434 154 CK N V L LEGV TL R NSPFWTIHP LG C E NV TVDGV TI DN P AD APNTDGIDPDS CR NV L IE N CYI DT GDD AI A I KSG R D AD G RR 233
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22329119 296 v A RP SS NIVIR RISGTTRTC s G VG IGSE M SGG IF N I TVE DIHVWDSAA GLRIK TDK GRGG YIS NIT FN N VLLEK VK - V PI 374
Cdd:COG5434 234 - N RP TE NIVIR NCTFRSGHG - G IV IGSE T SGG VR N V TVE NCTFDGTDR GLRIK SRR GRGG VVE NIT IR N ITMRN VK g T PI 311
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*....
gi 22329119 375 RFSS gsndh SDDKWDPKAL P RVKG I Y ISNV VSLNSRK A PMLL G VEGTSFQDVC L R NVT L 433
Cdd:COG5434 312 FINL ----- FYEGDRGGPT P TFRN I T ISNV TATGAKS A ILIA G LPEAPIENIT L E NVT I 365
Name
Accession
Description
Interval
E-value
Pgu1
COG5434 Polygalacturonase [Carbohydrate transport and metabolism];
65-433
8.74e-124
Polygalacturonase [Carbohydrate transport and metabolism];
Pssm-ID: 444185 [Multi-domain]
Cd Length: 373
Bit Score: 365.30
E-value: 8.74e-124
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22329119 65 P FP NRIV m S ITDFG GV GDGKT S NTAA FRR A VRHL egf AA E GG AQLN VP E GT W L S G SFN L T SN F TL F LE R GA LI LGS K D LD 144
Cdd:COG5434 4 S FP AKTF - N ITDFG AK GDGKT L NTAA IQK A IDAC --- AA A GG GTVL VP A GT Y L T G PIF L K SN V TL H LE K GA TL LGS T D PA 79
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22329119 145 EW P II E PLPSY G RGRE rpggr HIS LI HGD N LT N VV ITGE n GTIDG Q G KM WW EL -------- W WNRTLVHT - R GH LI E LKN 215
Cdd:COG5434 80 DY P LV E TRWEG G ELKG ----- YSA LI YAE N AE N IA ITGE - GTIDG N G DA WW PW kkearqsg W VPVGAYDY l R PR LI Q LKN 153
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22329119 216 SH N I L ISNL TL L NSPFWTIHP VY C S NV VIRNM TI LA P MN APNTDGIDPDS ST NV C IE D CYI ES GDD LV A V KSG W D QY G MA 295
Cdd:COG5434 154 CK N V L LEGV TL R NSPFWTIHP LG C E NV TVDGV TI DN P AD APNTDGIDPDS CR NV L IE N CYI DT GDD AI A I KSG R D AD G RR 233
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22329119 296 v A RP SS NIVIR RISGTTRTC s G VG IGSE M SGG IF N I TVE DIHVWDSAA GLRIK TDK GRGG YIS NIT FN N VLLEK VK - V PI 374
Cdd:COG5434 234 - N RP TE NIVIR NCTFRSGHG - G IV IGSE T SGG VR N V TVE NCTFDGTDR GLRIK SRR GRGG VVE NIT IR N ITMRN VK g T PI 311
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*....
gi 22329119 375 RFSS gsndh SDDKWDPKAL P RVKG I Y ISNV VSLNSRK A PMLL G VEGTSFQDVC L R NVT L 433
Cdd:COG5434 312 FINL ----- FYEGDRGGPT P TFRN I T ISNV TATGAKS A ILIA G LPEAPIENIT L E NVT I 365
Glyco_hydro_28
pfam00295 Glycosyl hydrolases family 28; Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2. ...
170-452
1.73e-38
Glycosyl hydrolases family 28; Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes is important in cell wall metabolism.
Pssm-ID: 425588 [Multi-domain]
Cd Length: 319
Bit Score: 142.14
E-value: 1.73e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22329119 170 I H G DNL T NVVIT G en GTIDGQG KM WW EL - WWNRTLVHTRGHL I ELKNSH N IL I SN L TLL NSP FWTIHPVYCSNVV I RNM T 248
Cdd:pfam00295 46 I S G SSI T VTGAS G -- GTIDGQG QR WW DG k GTKKNGGKKKPKF I YIHKVK N SK I TG L NIK NSP VFHFSVQSGTDLT I SDI T 123
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22329119 249 I LAP --- M N AP NTDG I D PD SS TN V C I EDCY I ESG DD LV A VK SG wdqygmavarps SNI V I rrisg T TR TC S --- G VG IGS 322
Cdd:pfam00295 124 I DNS agd S N GH NTDG F D VG SS SG V T I SNTN I YNQ DD CI A IN SG ------------ SNI S I ----- T NV TC G ggh G IS IGS 186
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22329119 323 EMSGG --- IF N I TV E D IH V WD S AA G L RIKT DK G RG G YI SNIT FN N VL L EKVKV - P I RF ssgsn D HSDDKWD P KAL P r VK G 398
Cdd:pfam00295 187 VGGRS dnt VK N V TV K D ST V VN S DN G V RIKT IS G AT G TV SNIT YE N IV L SNISK y G I VI ----- D QDYENGE P TGK P - TS G 260
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 22329119 399 IY IS NVV ------ SLN S RKAPML L GVEGT S FQDVCLRN V TLL G LPK T ek W KCK D V SGY AS 452
Cdd:pfam00295 261 VK IS DIT fknvtg TVA S SATAVY L LCGDG S CSGWTWSG V NIT G GKS T -- S KCK N V PSG AS 318
PLN03003
PLN03003 Probable polygalacturonase At3g15720
72-471
1.47e-31
Probable polygalacturonase At3g15720
Pssm-ID: 178580 [Multi-domain]
Cd Length: 456
Bit Score: 126.33
E-value: 1.47e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22329119 72 MSI T D FG G VGDG K T SNTA AF RR A VRHL eg FAAE G GA Q LN VP E G TWL ------- S GS FNL T SN F TLF L er G A L ILG SK --- 141
Cdd:PLN03003 24 LDV T Q FG A VGDG V T DDSQ AF LK A WEAV -- CSGT G DG Q FV VP A G MTF mlqplkf Q GS CKS T PV F VQM L -- G K L VAP SK gnw 99
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22329119 142 -- D L D E W PIIE plpsygrgrerpggrhislihgd NLTNV VI T G e N G T I D GQG KM WWE lwwnrtlv H -- T R GHLIELKNSH 217
Cdd:PLN03003 100 kg D K D Q W ILFT ----------------------- DIEGL VI E G - D G E I N GQG SS WWE -------- H kg S R PTALKFRSCN 147
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22329119 218 N ILI S N LT L L N SP FWT IH PVY C SN V V I RNMT I L AP MNA PNTDGID PDS S T NV C I E DC Y I ES GDD LV A VK SG wdqygmava 297
Cdd:PLN03003 148 N LRL S G LT H L D SP MAH IH ISE C NY V T I SSLR I N AP ESS PNTDGID VGA S S NV V I Q DC I I AT GDD CI A IN SG --------- 218
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22329119 298 rp S SNI vir R ISG T tr T C S --- G VG IGS EMSG G ---- IF N IT V EDIHVWDSAA G L RIKT DK G RG GY ISN ITFN NVL L EK V 370
Cdd:PLN03003 219 -- T SNI --- H ISG I -- D C G pgh G IS IGS LGKD G etat VE N VC V QNCNFRGTMN G A RIKT WQ G GS GY ARM ITFN GIT L DN V 291
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22329119 371 KV PI ---- RFSS G SN D HSD D K w DPK A LPRV K GIYISNVVSLN S RKAPMLLGV E GTSFQDVC LR NVTL ---- L G LPKTEKW 442
Cdd:PLN03003 292 EN PI iidq FYNG G DS D NAK D R - KSS A VEVS K VVFSNFIGTSK S EYGVDFRCS E RVPCTEIF LR DMKI etas S G SGQVAQG 370
410 420 430
....*....|....*....|....*....|
gi 22329119 443 K C KD V S G YASDVF P - L S C PQ L LQKKG S I AQ 471
Cdd:PLN03003 371 Q C LN V R G ASTIAV P g L E C LE L STDMF S S AQ 400
Name
Accession
Description
Interval
E-value
Pgu1
COG5434 Polygalacturonase [Carbohydrate transport and metabolism];
65-433
8.74e-124
Polygalacturonase [Carbohydrate transport and metabolism];
Pssm-ID: 444185 [Multi-domain]
Cd Length: 373
Bit Score: 365.30
E-value: 8.74e-124
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22329119 65 P FP NRIV m S ITDFG GV GDGKT S NTAA FRR A VRHL egf AA E GG AQLN VP E GT W L S G SFN L T SN F TL F LE R GA LI LGS K D LD 144
Cdd:COG5434 4 S FP AKTF - N ITDFG AK GDGKT L NTAA IQK A IDAC --- AA A GG GTVL VP A GT Y L T G PIF L K SN V TL H LE K GA TL LGS T D PA 79
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22329119 145 EW P II E PLPSY G RGRE rpggr HIS LI HGD N LT N VV ITGE n GTIDG Q G KM WW EL -------- W WNRTLVHT - R GH LI E LKN 215
Cdd:COG5434 80 DY P LV E TRWEG G ELKG ----- YSA LI YAE N AE N IA ITGE - GTIDG N G DA WW PW kkearqsg W VPVGAYDY l R PR LI Q LKN 153
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22329119 216 SH N I L ISNL TL L NSPFWTIHP VY C S NV VIRNM TI LA P MN APNTDGIDPDS ST NV C IE D CYI ES GDD LV A V KSG W D QY G MA 295
Cdd:COG5434 154 CK N V L LEGV TL R NSPFWTIHP LG C E NV TVDGV TI DN P AD APNTDGIDPDS CR NV L IE N CYI DT GDD AI A I KSG R D AD G RR 233
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22329119 296 v A RP SS NIVIR RISGTTRTC s G VG IGSE M SGG IF N I TVE DIHVWDSAA GLRIK TDK GRGG YIS NIT FN N VLLEK VK - V PI 374
Cdd:COG5434 234 - N RP TE NIVIR NCTFRSGHG - G IV IGSE T SGG VR N V TVE NCTFDGTDR GLRIK SRR GRGG VVE NIT IR N ITMRN VK g T PI 311
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*....
gi 22329119 375 RFSS gsndh SDDKWDPKAL P RVKG I Y ISNV VSLNSRK A PMLL G VEGTSFQDVC L R NVT L 433
Cdd:COG5434 312 FINL ----- FYEGDRGGPT P TFRN I T ISNV TATGAKS A ILIA G LPEAPIENIT L E NVT I 365
Glyco_hydro_28
pfam00295 Glycosyl hydrolases family 28; Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2. ...
170-452
1.73e-38
Glycosyl hydrolases family 28; Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes is important in cell wall metabolism.
Pssm-ID: 425588 [Multi-domain]
Cd Length: 319
Bit Score: 142.14
E-value: 1.73e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22329119 170 I H G DNL T NVVIT G en GTIDGQG KM WW EL - WWNRTLVHTRGHL I ELKNSH N IL I SN L TLL NSP FWTIHPVYCSNVV I RNM T 248
Cdd:pfam00295 46 I S G SSI T VTGAS G -- GTIDGQG QR WW DG k GTKKNGGKKKPKF I YIHKVK N SK I TG L NIK NSP VFHFSVQSGTDLT I SDI T 123
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22329119 249 I LAP --- M N AP NTDG I D PD SS TN V C I EDCY I ESG DD LV A VK SG wdqygmavarps SNI V I rrisg T TR TC S --- G VG IGS 322
Cdd:pfam00295 124 I DNS agd S N GH NTDG F D VG SS SG V T I SNTN I YNQ DD CI A IN SG ------------ SNI S I ----- T NV TC G ggh G IS IGS 186
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22329119 323 EMSGG --- IF N I TV E D IH V WD S AA G L RIKT DK G RG G YI SNIT FN N VL L EKVKV - P I RF ssgsn D HSDDKWD P KAL P r VK G 398
Cdd:pfam00295 187 VGGRS dnt VK N V TV K D ST V VN S DN G V RIKT IS G AT G TV SNIT YE N IV L SNISK y G I VI ----- D QDYENGE P TGK P - TS G 260
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 22329119 399 IY IS NVV ------ SLN S RKAPML L GVEGT S FQDVCLRN V TLL G LPK T ek W KCK D V SGY AS 452
Cdd:pfam00295 261 VK IS DIT fknvtg TVA S SATAVY L LCGDG S CSGWTWSG V NIT G GKS T -- S KCK N V PSG AS 318
PLN03003
PLN03003 Probable polygalacturonase At3g15720
72-471
1.47e-31
Probable polygalacturonase At3g15720
Pssm-ID: 178580 [Multi-domain]
Cd Length: 456
Bit Score: 126.33
E-value: 1.47e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22329119 72 MSI T D FG G VGDG K T SNTA AF RR A VRHL eg FAAE G GA Q LN VP E G TWL ------- S GS FNL T SN F TLF L er G A L ILG SK --- 141
Cdd:PLN03003 24 LDV T Q FG A VGDG V T DDSQ AF LK A WEAV -- CSGT G DG Q FV VP A G MTF mlqplkf Q GS CKS T PV F VQM L -- G K L VAP SK gnw 99
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22329119 142 -- D L D E W PIIE plpsygrgrerpggrhislihgd NLTNV VI T G e N G T I D GQG KM WWE lwwnrtlv H -- T R GHLIELKNSH 217
Cdd:PLN03003 100 kg D K D Q W ILFT ----------------------- DIEGL VI E G - D G E I N GQG SS WWE -------- H kg S R PTALKFRSCN 147
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22329119 218 N ILI S N LT L L N SP FWT IH PVY C SN V V I RNMT I L AP MNA PNTDGID PDS S T NV C I E DC Y I ES GDD LV A VK SG wdqygmava 297
Cdd:PLN03003 148 N LRL S G LT H L D SP MAH IH ISE C NY V T I SSLR I N AP ESS PNTDGID VGA S S NV V I Q DC I I AT GDD CI A IN SG --------- 218
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22329119 298 rp S SNI vir R ISG T tr T C S --- G VG IGS EMSG G ---- IF N IT V EDIHVWDSAA G L RIKT DK G RG GY ISN ITFN NVL L EK V 370
Cdd:PLN03003 219 -- T SNI --- H ISG I -- D C G pgh G IS IGS LGKD G etat VE N VC V QNCNFRGTMN G A RIKT WQ G GS GY ARM ITFN GIT L DN V 291
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22329119 371 KV PI ---- RFSS G SN D HSD D K w DPK A LPRV K GIYISNVVSLN S RKAPMLLGV E GTSFQDVC LR NVTL ---- L G LPKTEKW 442
Cdd:PLN03003 292 EN PI iidq FYNG G DS D NAK D R - KSS A VEVS K VVFSNFIGTSK S EYGVDFRCS E RVPCTEIF LR DMKI etas S G SGQVAQG 370
410 420 430
....*....|....*....|....*....|
gi 22329119 443 K C KD V S G YASDVF P - L S C PQ L LQKKG S I AQ 471
Cdd:PLN03003 371 Q C LN V R G ASTIAV P g L E C LE L STDMF S S AQ 400
PLN02218
PLN02218 polygalacturonase ADPG
72-436
2.89e-30
polygalacturonase ADPG
Pssm-ID: 177865 [Multi-domain]
Cd Length: 431
Bit Score: 122.06
E-value: 2.89e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22329119 72 M S IT DFG GV GDGKT SN T A AF RR A VR hl EGFAAE G GAQ L N VP E G - T W L SG S FN LT S ------ NFTL F LERG A LILG S -- KD 142
Cdd:PLN02218 68 V S VS DFG AK GDGKT DD T Q AF VN A WK -- KACSSN G AVN L L VP K G n T Y L LK S IQ LT G pcksir TVQI F GTLS A SQKR S dy KD 145
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22329119 143 LDE W PIIEPL psygrgrerpggrhislihg D NL T nv V IT G EN G TI DG Q G KM WW E -- LWW N RTLVH T RG - HLIELK NS HNI 219
Cdd:PLN02218 146 ISK W IMFDGV -------------------- N NL S -- V DG G ST G VV DG N G ET WW Q ns CKR N KAKPC T KA p TALTFY NS KSL 203
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22329119 220 LIS NL TLL N SPFWT I HPVY CSNV VIR N MTIL AP MNA PNTDGI DPDSST N VCIEDCY I ES GDD LVAVK SG wdqygmavarp 299
Cdd:PLN02218 204 IVK NL RVR N AQQIQ I SIEK CSNV QVS N VVVT AP ADS PNTDGI HITNTQ N IRVSNSI I GT GDD CISIE SG ----------- 272
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22329119 300 S S N IV I RR I sgttr TC S --- G VG IGS ---- EMSGGIFNI TV EDIHVWDSAA G L RIKT DK G RG G YI SNI T F N N VLL E K VK V 372
Cdd:PLN02218 273 S Q N VQ I ND I ----- TC G pgh G IS IGS lgdd NSKAFVSGV TV DGAKLSGTDN G V RIKT YQ G GS G TA SNI I F Q N IQM E N VK N 347
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 22329119 373 PI RFSSGSN D H S ddkwdp K ALPRVKGIYIS NVV SL N srkapmllg VE GTS FQ DV ----- C LR N VTLL G L 436
Cdd:PLN02218 348 PI IIDQDYC D K S ------ K CTSQQSAVQVK NVV YR N --------- IS GTS AS DV aitfn C SK N YPCQ G I 401
PLN03010
PLN03010 polygalacturonase
73-453
4.19e-27
polygalacturonase
Pssm-ID: 215540 [Multi-domain]
Cd Length: 409
Bit Score: 112.78
E-value: 4.19e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22329119 73 SITD FG GV GDG K T SNTA AF RR A VR hlegf A AE GG AQ ---- L NV P E G - T W L ------ S G SFNL TS nft LFLERGAL I LGSK 141
Cdd:PLN03010 48 NVLK FG AK GDG Q T DDSN AF LQ A WN ----- A TC GG EG nint L LI P S G k T Y L lqpief K G PCKS TS --- IKVQLDGI I VAPS 119
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22329119 142 DLDE W -- P IIEPLP S Y grgrerpggrhislihg DNLTNVV I T G e N GTIDG Q G KMW WE L wwnrtlvhtrghl IELKNSH N I 219
Cdd:PLN03010 120 NIVA W sn P KSQMWI S F ----------------- STVSGLM I D G - S GTIDG R G SSF WE A ------------- LHISKCD N L 168
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22329119 220 L I SNL T LLN SP FWT I HPVY C SN V V I RNMT ILAP MNA PNTDGID PDS STN VC I E D CY I ES GDD LV A VK SG wdqygmavarp 299
Cdd:PLN03010 169 T I NGI T SID SP KNH I SIKT C NY V A I SKIN ILAP ETS PNTDGID ISY STN IN I F D ST I QT GDD CI A IN SG ----------- 237
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22329119 300 SSNI V I RR I S gttrt C S --- G VGI GS EMSG G I f N IT V E D I HV W ----- DSAA G L RIKT DK G RG GY IS NI T F N N VL L EKV K 371
Cdd:PLN03010 238 SSNI N I TQ I N ----- C G pgh G ISV GS LGAD G A - N AK V S D V HV T hctfn QTTN G A RIKT WQ G GQ GY AR NI S F E N IT L INT K 311
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22329119 372 V PI RFSSGSN D -- HS D DKW D PK - A LPR VK gi Y ISNVVSLNSRK A PM L LGVEG T SFQ DV CLRNVTLL ---- GL PK T E kwk C 444
Cdd:PLN03010 312 N PI IIDQQYI D kg KL D ATK D SA v A ISN VK -- Y VGFRGTTSNEN A IT L KCSAI T HCK DV VMDDIDVT meng EK PK V E --- C 386
....*....
gi 22329119 445 KD V S G YA SD 453
Cdd:PLN03010 387 QN V E G ES SD 395
PLN02793
PLN02793 Probable polygalacturonase
22-374
1.12e-23
Probable polygalacturonase
Pssm-ID: 215426 [Multi-domain]
Cd Length: 443
Bit Score: 103.03
E-value: 1.12e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22329119 22 L LL VFT V LAI L SLQISSN SF LP L w IPTS Q YDDPV T csgffnh D P FPN R i V MSIT DFG GV GDG K T SN T A AF RR A VR hl EGF 101
Cdd:PLN02793 12 C LL LLV V ASS L AFVCNQG SF ES L - LQLP Q RQSAR T ------- R P RSE R - V LHVG DFG AK GDG V T DD T Q AF KE A WK -- MAC 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22329119 102 AAEGGAQLNV P E G - T W L SGSFN L T ---- SNF TL FLE rg AL I LGS KD L D E W PIIE P lpsygrgrerpgg R HISLI HG dn LT 176
Cdd:PLN02793 81 SSKVKTRIVI P A G y T F L VRPID L G gpck AKL TL QIS -- GT I IAP KD P D V W KGLN P ------------- R KWLYF HG -- VN 143
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22329119 177 NVVIT G e N GT ID G Q G KM WW E lwwn RTLVHTRGH ------- L I ELKNSHNILIS NL TLLN S PFWT I HPVY C SN V V I RNMTI 249
Cdd:PLN02793 144 HLTVE G - G GT VN G M G HE WW A ---- QSCKINHTN pcrhapt A I TFHKCKDLRVE NL NVID S QQMH I AFTN C RR V T I SGLKV 218
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22329119 250 L AP MNA PNTDGI DPDS S TN V C I E D CYIES GDD LVAVKSG wdqygmavarp SS N I V IR R I S gttrt C S --- G VG IGS ---- 322
Cdd:PLN02793 219 I AP ATS PNTDGI HISA S RG V V I K D SIVRT GDD CISIVGN ----------- SS R I K IR N I A ----- C G pgh G IS IGS lgks 282
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|..
gi 22329119 323 EMSGGIFN ITV EDIHVWDSAA G L RIKT DK G RG G YI S N ITF N N VLL E K V KV PI 374
Cdd:PLN02793 283 NSWSEVRD ITV DGAFLSNTDN G V RIKT WQ G GS G NA S K ITF Q N IFM E N V SN PI 334
PLN02188
PLN02188 polygalacturonase/glycoside hydrolase family protein
56-460
1.48e-21
polygalacturonase/glycoside hydrolase family protein
Pssm-ID: 215120 [Multi-domain]
Cd Length: 404
Bit Score: 96.46
E-value: 1.48e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22329119 56 TCS G FFNHDPFPNRIVMSITD FG GVGD G K T SNTA AF RR A VR hl EGF A AE G GAQ L NV P E GT WLS G SFNL ------ T S NF T L 129
Cdd:PLN02188 21 SSA G GGSVVKGSSTFLFDVRS FG ARAN G H T DDSK AF MA A WK -- AAC A ST G AVT L LI P P GT YYI G PVQF hgpctn V S SL T F 98
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22329119 130 F L E rgalil GSK DL DEW piieplpsygrgrerpg G RHISL I HGDNLTNVVI TG e N GT I DGQG KMW W E lw W N RTLVHTRGH 209
Cdd:PLN02188 99 T L K ------ AAT DL SRY ----------------- G SGNDW I EFGWVNGLTL TG - G GT F DGQG AAA W P -- F N KCPIRKDCK 152
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22329119 210 L ---- IELK N SH N ILISNL T LL NS P F WT I HP V Y C S N VVIRNMT I L AP MNA PNTDGI DPDS S TN V C I E D CY I ES GDD LVAV 285
Cdd:PLN02188 153 L lpts VKFV N MN N TVVRGI T SV NS K F FH I AL V E C R N FKGSGLK I S AP SDS PNTDGI HIER S SG V Y I S D SR I GT GDD CISI 232
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22329119 286 KS G wdqygmavarp S S NIV I R RI sgttr T C S --- G VGI GS ---- EMS G GIFNIT V E D IHVWDSAA G L RIKT DKGRG G -- Y 356
Cdd:PLN02188 233 GQ G ----------- N S QVT I T RI ----- R C G pgh G ISV GS lgry PNE G DVTGLV V R D CTFTGTTN G I RIKT WANSP G ks A 296
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22329119 357 IS N I TF N N VLLEK V KV PI RF ssgsndhs D D K WD P ------ K ALPR V K -- G IY IS N VVSLN S RKAPM LL G - VE G TSF Q D V C 427
Cdd:PLN02188 297 AT N M TF E N IVMNN V TN PI II -------- D Q K YC P fysces K YPSG V T ls D IY FK N IRGTS S SQVAV LL K c SR G VPC Q G V Y 368
410 420 430
....*....|....*....|....*....|....*..
gi 22329119 428 L RN V T l L G L PKT E KW --- K C KD V SG - Y ASDVF P LS CP 460
Cdd:PLN02188 369 L QD V H - L D L SSG E GG tss S C EN V RA k Y IGTQI P PP CP 404
PLN02155
PLN02155 polygalacturonase
70-374
2.87e-14
polygalacturonase
Pssm-ID: 165802 [Multi-domain]
Cd Length: 394
Bit Score: 74.33
E-value: 2.87e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22329119 70 I V MSITD FG GVG DG K T SN TAAF RR A VRHLE G F A AE gg A QLN VP E GT W L ------------------ S G SFNLTSNFTL F L 131
Cdd:PLN02155 26 N V FNVVS FG AKP DG V T DS TAAF LK A WQGAC G S A SS -- A TVV VP T GT F L lkvitfggpckskitfqv A G TVVAPEDYRT F G 103
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22329119 132 ER G AL IL GS K dldewpiieplpsygrgrerpg GRHI SL I hgdnltnvvitge N GT I D GQGKMW W ELWWNRTLVHTRGHL I 211
Cdd:PLN02155 104 NS G YW IL FN K ---------------------- VNRF SL V ------------- G GT F D ARANGF W SCRKSGQNCPPGVRS I 148
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22329119 212 ELKNSHNIL IS NLTLL NS PFWTIHPVY C S NVV I RN MTIL AP M N A PNTDG IDPDS ST N V CIEDCYIES GDD L VA VKS G wdq 291
Cdd:PLN02155 149 SFNSAKDVI IS GVKSM NS QVSHMTLNG C T NVV V RN VKLV AP G N S PNTDG FHVQF ST G V TFTGSTVQT GDD C VA IGP G --- 225
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22329119 292 ygmavarp SS N IV I RRIS gt TRTCS GV G IGS EM ---- SG G IF N I TV EDIHVWD S AA G L RIK T - DKGRG G YIS N IT F NNVL 366
Cdd:PLN02155 226 -------- TR N FL I TKLA -- CGPGH GV S IGS LA keln ED G VE N V TV SSSVFTG S QN G V RIK S w ARPST G FVR N VF F QDLV 295
....*...
gi 22329119 367 LEK V KV PI 374
Cdd:PLN02155 296 MKN V EN PI 303
Pectate_lyase_3
pfam12708 Pectate lyase superfamily protein; This family of proteins possesses a beta helical structure ...
73-346
2.27e-09
Pectate lyase superfamily protein; This family of proteins possesses a beta helical structure like Pectate lyase. This family is most closely related to glycosyl hydrolase family 28.
Pssm-ID: 403800 [Multi-domain]
Cd Length: 213
Bit Score: 57.33
E-value: 2.27e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22329119 73 SIT D F G GV GDG K T SN TAA FRR A VRH le G F A AEGG A QLNV P E GT W L - S GSFN L T S NFT L F ler G A lilg SKD lde W P IIEP 151
Cdd:pfam12708 3 NVK D Y G AK GDG V T DD TAA IQK A IDD -- G G A TTTP A VVYF P P GT Y L v S SPII L Y S GTV L V --- G D ---- GNN --- P P VLKA 70
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22329119 152 L P SYGR grerpggrhislihgdnltnvvitge N G T IDG QGKMWWELWWNR T LVHT R G hlie LK N shni L ISNL T LLNSPF 231
Cdd:pfam12708 71 A P NFVG -------------------------- A G L IDG DPYTGGGPGIIN T NNFY R Q ---- IR N ---- L VIDI T GVAPGA 116
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22329119 232 WT IH PVYCSNVVIR N MTILAPMNAP N T - D GI DPDSSTNVCIE D CYIES GD DLV AV ksg WD Q Y gmavarpssn IVI R R I sg 310
Cdd:pfam12708 117 TG IH WQVAQATSLQ N VVFEMSFGSG N K h Q GI FMENGSGGFLN D LVFNG GD IGI AV --- GN Q Q ---------- FTT R N I -- 181
250 260 270
....*....|....*....|....*....|....*.
gi 22329119 311 ttr T CSGV G I G SEMSG G I f NI T VEDIHVWDSAA G LR 346
Cdd:pfam12708 182 --- T FHNC G T G IDVLW G W - GW T YSNNNINNCGV G ID 213
Blast search parameters
Data Source:
Precalculated data, version = cdd.v.3.21
Preset Options: Database: CDSEARCH/cdd Low complexity filter: no Composition Based Adjustment: yes E-value threshold: 0.01
