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Conserved domains on  [gi|15234037|ref|NP_195028|]
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ZIP metal ion transporter family [Arabidopsis thaliana]

Protein Classification

ZIP family transporter( domain architecture ID 579)

ZIP family transporter may function as a zinc transporter, mediating the uptake of zinc in bacteria or the transport of zinc from one cellular compartment to another in eukaryotes

Gene Ontology:  GO:0046873|GO:0030001
PubMed:  23046653|10748254
TCDB:  2.A.5

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
Zip super family cl00437
ZIP Zinc transporter; The ZIP family consists of zinc transport proteins and many putative ...
2-344 3.87e-109

ZIP Zinc transporter; The ZIP family consists of zinc transport proteins and many putative metal transporters. The main contribution to this family is from the Arabidopsis thaliana ZIP protein family these proteins are responsible for zinc uptake in the plant. Also found within this family are C. elegans proteins of unknown function which are annotated as being similar to human growth arrest inducible gene product, although this protein in not found within this family.


The actual alignment was detected with superfamily member TIGR00820:

Pssm-ID: 444905  Cd Length: 324  Bit Score: 321.26  E-value: 3.87e-109
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15234037     2 ASILISGAAGVSIPLVGT---LLPLNGGLMRGAKAFAAGVILATGFVHMLSGGSKALSDPCLPEFPWKMFPFPEFFAMVA 78
Cdd:TIGR00820  24 FSILLASVIGVMFPLIGKnvpSLRPEGNFFFVAKAFAAGVILATGFMHVLPEAFEMLSSPCLESTPWGKFPFAGFIAMIS 103
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15234037    79 ALLTLLADFMITGYYERKQEKmmnqsveslgtqvsvmSDPGLESGFLRDQEDGGAlhivgmRAHAEHHRHSLSMGAEGFE 158
Cdd:TIGR00820 104 AILTLLVDLFATSYYERKHGK----------------GDHGSKEIKVGDGEEGTA------GGTKHGHEYYEDHVHTNSE 161
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15234037   159 ALSKrsgvsghghghshghgdvgldsgVRHVVVSQILEMGIVSHSIIIGISLGVSHSPCTIRPLLLALSFHQFFEGFALG 238
Cdd:TIGR00820 162 VVQL-----------------------LRQRVVAQVLELGIIVHSVVIGLSLGASQSPDTIKPLIAALSFHQFFEGLGLG 218
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15234037   239 GCVAEARLTPRGSAMMAFFFAITTPIGVAVGTAIASSYNSYSVAALVAEGVLDSLSAGILVYMALVDLIAADFLSKKMSV 318
Cdd:TIGR00820 219 GCISQAEFKCKSVTIMCTFFAVTTPLGIAIGMGISSSYDDSSPTALIVEGVLNAASAGILIYMALVDLLAADFMHPKMQS 298
                         330       340
                  ....*....|....*....|....*.
gi 15234037   319 DFRVQVVSYCFLFLGAGMMSALAIWA 344
Cdd:TIGR00820 299 NLRLQIMAYIALLLGAGLMSLLAKWA 324
 
Name Accession Description Interval E-value
zip TIGR00820
ZIP zinc/iron transport family; The Zinc (Zn2+)-Iron (Fe2+) Permease (ZIP) Family (TC 2.A.5) ...
2-344 3.87e-109

ZIP zinc/iron transport family; The Zinc (Zn2+)-Iron (Fe2+) Permease (ZIP) Family (TC 2.A.5)Members of the ZIP family consist of proteins with eight putative transmembrane spanners. They are derived from animals, plants and yeast. Theycomprise a diverse family, with several paralogues in any one organism (e.g., at least five in Caenorabditis elegans, at least five in Arabidopsis thaliana and two inSaccharomyces cervisiae. The two S. cerevisiae proteins, Zrt1 and Zrt2, both probably transport Zn2+ with high specificity, but Zrt1 transports Zn2+ with ten-fold higher affinitythan Zrt2. Some members of the ZIP family have been shown to transport Zn2+ while others transport Fe2+, and at least one transports a range of metal ions. The energy source fortransport has not been characterized, but these systems probably function as secondary carriers. [Transport and binding proteins, Cations and iron carrying compounds]


Pssm-ID: 273287  Cd Length: 324  Bit Score: 321.26  E-value: 3.87e-109
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15234037     2 ASILISGAAGVSIPLVGT---LLPLNGGLMRGAKAFAAGVILATGFVHMLSGGSKALSDPCLPEFPWKMFPFPEFFAMVA 78
Cdd:TIGR00820  24 FSILLASVIGVMFPLIGKnvpSLRPEGNFFFVAKAFAAGVILATGFMHVLPEAFEMLSSPCLESTPWGKFPFAGFIAMIS 103
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15234037    79 ALLTLLADFMITGYYERKQEKmmnqsveslgtqvsvmSDPGLESGFLRDQEDGGAlhivgmRAHAEHHRHSLSMGAEGFE 158
Cdd:TIGR00820 104 AILTLLVDLFATSYYERKHGK----------------GDHGSKEIKVGDGEEGTA------GGTKHGHEYYEDHVHTNSE 161
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15234037   159 ALSKrsgvsghghghshghgdvgldsgVRHVVVSQILEMGIVSHSIIIGISLGVSHSPCTIRPLLLALSFHQFFEGFALG 238
Cdd:TIGR00820 162 VVQL-----------------------LRQRVVAQVLELGIIVHSVVIGLSLGASQSPDTIKPLIAALSFHQFFEGLGLG 218
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15234037   239 GCVAEARLTPRGSAMMAFFFAITTPIGVAVGTAIASSYNSYSVAALVAEGVLDSLSAGILVYMALVDLIAADFLSKKMSV 318
Cdd:TIGR00820 219 GCISQAEFKCKSVTIMCTFFAVTTPLGIAIGMGISSSYDDSSPTALIVEGVLNAASAGILIYMALVDLLAADFMHPKMQS 298
                         330       340
                  ....*....|....*....|....*.
gi 15234037   319 DFRVQVVSYCFLFLGAGMMSALAIWA 344
Cdd:TIGR00820 299 NLRLQIMAYIALLLGAGLMSLLAKWA 324
PLN02159 PLN02159
Fe(2+) transport protein
3-344 3.59e-62

Fe(2+) transport protein


Pssm-ID: 177818  Cd Length: 337  Bit Score: 201.71  E-value: 3.59e-62
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15234037    3 SILISGAAGVSIPLVGTLLPL---NGGLMRGAKAFAAGVILATGFVHMLSGGSKALSDPCLPEFPWKMFPFPEFFAMVAA 79
Cdd:PLN02159  53 AILTTSMIGVTAPLFSRYVSFlrpDGNIFTIVKCFASGIILGTGFMHVLPDSFEMLSSKCLEDNPWHKFPFAGFVAMLSG 132
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15234037   80 LLTLLADFMITGYYERKQekmmnqsveslgtQVSVMSDpglesgflrdqedggalhivgmraHAEHHRHSLSMGAEgfea 159
Cdd:PLN02159 133 LVTLAIDSMATSLYTSKN-------------SVGPMPD------------------------HGHSHGHGVVLKTK---- 171
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15234037  160 lskrsgvsghghghshghgdvglDSG----VRHVVVSQILEMGIVSHSIIIGISLGVSHSPCTIRPLLLALSFHQFFEGF 235
Cdd:PLN02159 172 -----------------------DDGnaqlLRYRVIAMVLELGIIVHSVVIGLSLGATNDTCTIKGLIAALCFHQMFEGM 228
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15234037  236 ALGGCVAEARLTPRGSAMMAFFFAITTPIGVAVGTAIASSYNSYSVAALVAEGVLDSLSAGILVYMALVDLIAADFLSKK 315
Cdd:PLN02159 229 GLGGCILQAEYTNVKKFLMAFFFAVTTPFGIFLGIALSSIYRDNSPTALITVGLLNACSAGLLIYMALVDLLAAEFMGPK 308
                        330       340
                 ....*....|....*....|....*....
gi 15234037  316 MSVDFRVQVVSYCFLFLGAGMMSALAIWA 344
Cdd:PLN02159 309 LQGSIKLQIKCFFAALLGCGGMSIVAKWA 337
Zip pfam02535
ZIP Zinc transporter; The ZIP family consists of zinc transport proteins and many putative ...
1-341 1.42e-59

ZIP Zinc transporter; The ZIP family consists of zinc transport proteins and many putative metal transporters. The main contribution to this family is from the Arabidopsis thaliana ZIP protein family these proteins are responsible for zinc uptake in the plant. Also found within this family are C. elegans proteins of unknown function which are annotated as being similar to human growth arrest inducible gene product, although this protein in not found within this family.


Pssm-ID: 396884 [Multi-domain]  Cd Length: 325  Bit Score: 194.52  E-value: 1.42e-59
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15234037     1 MASILISGAAGVSIPLVGTL---LPLNGGLMRGAKAFAAGVILATGFVHMLSGGSKALSDPCLPEFPWkMFPFPEFFAMV 77
Cdd:pfam02535   8 IFAILIISLIGGLLPLLVPKiskLRPSSKLLSLLLAFASGVLLGTAFLHLLPEALEALESLCLSDHGW-HFPFAGLIVLL 86
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15234037    78 AALLTLLADFMITGYYERKQEKMMNQSVESLGTQVSVMSDPGLESGFLRD---QEDGGALHIVGMRAHAEHHRHSLSMGA 154
Cdd:pfam02535  87 GFLLVLLVEKLLTYYKHRPTPGPADNSHSHLATVKSVSNVEVTESEEGEDhghLHGHDDDSDELLHKGHQGPSDSIHEQS 166
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15234037   155 EGfealskrsgvsghghghshghgdvGLDSGVRHVVVSQILEMGIVSHSIIIGISLGVSHSPCTIRPLLLALSFHQFFEG 234
Cdd:pfam02535 167 DE------------------------DGEPLASQRVRAILLELGIILHSFFEGLALGVSSSSDTGISLFIAILFHKIPEG 222
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15234037   235 FALGGCVAEARLTPRGSAMMAFFFAITTPIGVAVGTAIASSYNSYsvAALVAEGVLDSLSAGILVYMALVDLIAADFLSK 314
Cdd:pfam02535 223 LGLGAILLQAGFSRKKAVLLALLFALTTPLGILIGIGVSSIGNSP--GADITSGILLAFSAGTFLYVALVELLPHELLRN 300
                         330       340
                  ....*....|....*....|....*..
gi 15234037   315 KMSVdfRVQVVSYCFLFLGAGMMSALA 341
Cdd:pfam02535 301 KSSE--KLSLLQLLALLLGFALMALLA 325
ZupT COG0428
Zinc transporter ZupT [Inorganic ion transport and metabolism];
197-307 2.37e-04

Zinc transporter ZupT [Inorganic ion transport and metabolism];


Pssm-ID: 440197 [Multi-domain]  Cd Length: 243  Bit Score: 42.09  E-value: 2.37e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15234037 197 MGIVSHSIIIGISLGVS--HSPCTIRPLLLALSFHQFFEGFALGGCVAEARLTPRGSAMMAFFFAITTPIGVAVGtAIAS 274
Cdd:COG0428 109 LGITLHNFPEGLAIGVAfaADPALGLALALAIALHNIPEGLAVAAPLRAAGYSRRKALLLGLLSGLVEPLGALLG-YLLL 187
                        90       100       110
                ....*....|....*....|....*....|...
gi 15234037 275 SYNSYSVAALVAegvldsLSAGILVYMALVDLI 307
Cdd:COG0428 188 SLSPALLPYLLA------FAAGAMLYVVVDELI 214
 
Name Accession Description Interval E-value
zip TIGR00820
ZIP zinc/iron transport family; The Zinc (Zn2+)-Iron (Fe2+) Permease (ZIP) Family (TC 2.A.5) ...
2-344 3.87e-109

ZIP zinc/iron transport family; The Zinc (Zn2+)-Iron (Fe2+) Permease (ZIP) Family (TC 2.A.5)Members of the ZIP family consist of proteins with eight putative transmembrane spanners. They are derived from animals, plants and yeast. Theycomprise a diverse family, with several paralogues in any one organism (e.g., at least five in Caenorabditis elegans, at least five in Arabidopsis thaliana and two inSaccharomyces cervisiae. The two S. cerevisiae proteins, Zrt1 and Zrt2, both probably transport Zn2+ with high specificity, but Zrt1 transports Zn2+ with ten-fold higher affinitythan Zrt2. Some members of the ZIP family have been shown to transport Zn2+ while others transport Fe2+, and at least one transports a range of metal ions. The energy source fortransport has not been characterized, but these systems probably function as secondary carriers. [Transport and binding proteins, Cations and iron carrying compounds]


Pssm-ID: 273287  Cd Length: 324  Bit Score: 321.26  E-value: 3.87e-109
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15234037     2 ASILISGAAGVSIPLVGT---LLPLNGGLMRGAKAFAAGVILATGFVHMLSGGSKALSDPCLPEFPWKMFPFPEFFAMVA 78
Cdd:TIGR00820  24 FSILLASVIGVMFPLIGKnvpSLRPEGNFFFVAKAFAAGVILATGFMHVLPEAFEMLSSPCLESTPWGKFPFAGFIAMIS 103
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15234037    79 ALLTLLADFMITGYYERKQEKmmnqsveslgtqvsvmSDPGLESGFLRDQEDGGAlhivgmRAHAEHHRHSLSMGAEGFE 158
Cdd:TIGR00820 104 AILTLLVDLFATSYYERKHGK----------------GDHGSKEIKVGDGEEGTA------GGTKHGHEYYEDHVHTNSE 161
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15234037   159 ALSKrsgvsghghghshghgdvgldsgVRHVVVSQILEMGIVSHSIIIGISLGVSHSPCTIRPLLLALSFHQFFEGFALG 238
Cdd:TIGR00820 162 VVQL-----------------------LRQRVVAQVLELGIIVHSVVIGLSLGASQSPDTIKPLIAALSFHQFFEGLGLG 218
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15234037   239 GCVAEARLTPRGSAMMAFFFAITTPIGVAVGTAIASSYNSYSVAALVAEGVLDSLSAGILVYMALVDLIAADFLSKKMSV 318
Cdd:TIGR00820 219 GCISQAEFKCKSVTIMCTFFAVTTPLGIAIGMGISSSYDDSSPTALIVEGVLNAASAGILIYMALVDLLAADFMHPKMQS 298
                         330       340
                  ....*....|....*....|....*.
gi 15234037   319 DFRVQVVSYCFLFLGAGMMSALAIWA 344
Cdd:TIGR00820 299 NLRLQIMAYIALLLGAGLMSLLAKWA 324
PLN02159 PLN02159
Fe(2+) transport protein
3-344 3.59e-62

Fe(2+) transport protein


Pssm-ID: 177818  Cd Length: 337  Bit Score: 201.71  E-value: 3.59e-62
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15234037    3 SILISGAAGVSIPLVGTLLPL---NGGLMRGAKAFAAGVILATGFVHMLSGGSKALSDPCLPEFPWKMFPFPEFFAMVAA 79
Cdd:PLN02159  53 AILTTSMIGVTAPLFSRYVSFlrpDGNIFTIVKCFASGIILGTGFMHVLPDSFEMLSSKCLEDNPWHKFPFAGFVAMLSG 132
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15234037   80 LLTLLADFMITGYYERKQekmmnqsveslgtQVSVMSDpglesgflrdqedggalhivgmraHAEHHRHSLSMGAEgfea 159
Cdd:PLN02159 133 LVTLAIDSMATSLYTSKN-------------SVGPMPD------------------------HGHSHGHGVVLKTK---- 171
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15234037  160 lskrsgvsghghghshghgdvglDSG----VRHVVVSQILEMGIVSHSIIIGISLGVSHSPCTIRPLLLALSFHQFFEGF 235
Cdd:PLN02159 172 -----------------------DDGnaqlLRYRVIAMVLELGIIVHSVVIGLSLGATNDTCTIKGLIAALCFHQMFEGM 228
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15234037  236 ALGGCVAEARLTPRGSAMMAFFFAITTPIGVAVGTAIASSYNSYSVAALVAEGVLDSLSAGILVYMALVDLIAADFLSKK 315
Cdd:PLN02159 229 GLGGCILQAEYTNVKKFLMAFFFAVTTPFGIFLGIALSSIYRDNSPTALITVGLLNACSAGLLIYMALVDLLAAEFMGPK 308
                        330       340
                 ....*....|....*....|....*....
gi 15234037  316 MSVDFRVQVVSYCFLFLGAGMMSALAIWA 344
Cdd:PLN02159 309 LQGSIKLQIKCFFAALLGCGGMSIVAKWA 337
Zip pfam02535
ZIP Zinc transporter; The ZIP family consists of zinc transport proteins and many putative ...
1-341 1.42e-59

ZIP Zinc transporter; The ZIP family consists of zinc transport proteins and many putative metal transporters. The main contribution to this family is from the Arabidopsis thaliana ZIP protein family these proteins are responsible for zinc uptake in the plant. Also found within this family are C. elegans proteins of unknown function which are annotated as being similar to human growth arrest inducible gene product, although this protein in not found within this family.


Pssm-ID: 396884 [Multi-domain]  Cd Length: 325  Bit Score: 194.52  E-value: 1.42e-59
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15234037     1 MASILISGAAGVSIPLVGTL---LPLNGGLMRGAKAFAAGVILATGFVHMLSGGSKALSDPCLPEFPWkMFPFPEFFAMV 77
Cdd:pfam02535   8 IFAILIISLIGGLLPLLVPKiskLRPSSKLLSLLLAFASGVLLGTAFLHLLPEALEALESLCLSDHGW-HFPFAGLIVLL 86
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15234037    78 AALLTLLADFMITGYYERKQEKMMNQSVESLGTQVSVMSDPGLESGFLRD---QEDGGALHIVGMRAHAEHHRHSLSMGA 154
Cdd:pfam02535  87 GFLLVLLVEKLLTYYKHRPTPGPADNSHSHLATVKSVSNVEVTESEEGEDhghLHGHDDDSDELLHKGHQGPSDSIHEQS 166
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15234037   155 EGfealskrsgvsghghghshghgdvGLDSGVRHVVVSQILEMGIVSHSIIIGISLGVSHSPCTIRPLLLALSFHQFFEG 234
Cdd:pfam02535 167 DE------------------------DGEPLASQRVRAILLELGIILHSFFEGLALGVSSSSDTGISLFIAILFHKIPEG 222
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15234037   235 FALGGCVAEARLTPRGSAMMAFFFAITTPIGVAVGTAIASSYNSYsvAALVAEGVLDSLSAGILVYMALVDLIAADFLSK 314
Cdd:pfam02535 223 LGLGAILLQAGFSRKKAVLLALLFALTTPLGILIGIGVSSIGNSP--GADITSGILLAFSAGTFLYVALVELLPHELLRN 300
                         330       340
                  ....*....|....*....|....*..
gi 15234037   315 KMSVdfRVQVVSYCFLFLGAGMMSALA 341
Cdd:pfam02535 301 KSSE--KLSLLQLLALLLGFALMALLA 325
ZupT COG0428
Zinc transporter ZupT [Inorganic ion transport and metabolism];
197-307 2.37e-04

Zinc transporter ZupT [Inorganic ion transport and metabolism];


Pssm-ID: 440197 [Multi-domain]  Cd Length: 243  Bit Score: 42.09  E-value: 2.37e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15234037 197 MGIVSHSIIIGISLGVS--HSPCTIRPLLLALSFHQFFEGFALGGCVAEARLTPRGSAMMAFFFAITTPIGVAVGtAIAS 274
Cdd:COG0428 109 LGITLHNFPEGLAIGVAfaADPALGLALALAIALHNIPEGLAVAAPLRAAGYSRRKALLLGLLSGLVEPLGALLG-YLLL 187
                        90       100       110
                ....*....|....*....|....*....|...
gi 15234037 275 SYNSYSVAALVAegvldsLSAGILVYMALVDLI 307
Cdd:COG0428 188 SLSPALLPYLLA------FAAGAMLYVVVDELI 214
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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