second and fourth Tudor-like Agenet domains found in the family of Arabidopsis thaliana DUF724 domain-containing proteins (AtDUFs); The family includes a group of AtDUFs (AtDUF1-3 and AtDUF6-8) that may be involved in the polar growth of plant cells via transportation of RNAs. Members of this family have four Tudor-like Agenet domains, except for AtDUF8, which contains only two copies of the Tudor-like Agenet domain. AtDUF4 and AtDUF5 are not included here due to the lack of a Tudor-like Agenet domain. The model corresponds to the second and fourth Tudor-like Agenet domains in AtDUF1-3 and AtDUF6-7, as well as the first Tudor-like Agenet domain in AtDUF8. The Tudor domain binds to proteins with dimethylated arginine or lysine residues, and may also bind methylated histone tails to facilitate protein-protein interactions.

                        10        20        30        40
                ....*....|....*....|....*....|....*....|....*..
gi 30695584  93 EGDVVDAAYKGGWCSGSVVKVLGNRRFLVYLRFQPDVIELLRKDLRP 139
Cdd:cd20406   1 LGDKVDAFYNGGWWPGVVTKVLEDNRYLVYLDATKEELEFEHSDLRP 47

Tudor domain superfamily; The Tudor domain is a conserved structural domain, originally identified in the Tudor protein of Drosophila, that adopts a beta-barrel-like core structure containing four short beta-strands followed by an alpha-helical region. It binds to proteins with dimethylated arginine or lysine residues, and may also bind methylated histone tails to facilitate protein-protein interactions. Tudor domain-containing proteins may mediate protein-protein interactions required for various DNA-templated biological processes, such as RNA metabolism, as well as histone modification and the DNA damage response. Members of this superfamily contain one or more copies of the Tudor domain.

                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 30695584  14 SKGSEIEISSQEYeyGSGNVWYCVILEENLAKskRKKLSVRHLDPLLKYDySPPLIKTTVHRFMR 78
Cdd:cd20405   2 SKGTEVEVSSEEE--GFRGSWYRAIVVKEPEG--EKKFLVKYDELLLDDG-SEPLEETVDLRRVR 61

second and fourth Tudor-like Agenet domains found in the family of Arabidopsis thaliana DUF724 domain-containing proteins (AtDUFs); The family includes a group of AtDUFs (AtDUF1-3 and AtDUF6-8) that may be involved in the polar growth of plant cells via transportation of RNAs. Members of this family have four Tudor-like Agenet domains, except for AtDUF8, which contains only two copies of the Tudor-like Agenet domain. AtDUF4 and AtDUF5 are not included here due to the lack of a Tudor-like Agenet domain. The model corresponds to the second and fourth Tudor-like Agenet domains in AtDUF1-3 and AtDUF6-7, as well as the first Tudor-like Agenet domain in AtDUF8. The Tudor domain binds to proteins with dimethylated arginine or lysine residues, and may also bind methylated histone tails to facilitate protein-protein interactions.

                        10        20        30        40
                ....*....|....*....|....*....|....*....|....*..
gi 30695584  93 EGDVVDAAYKGGWCSGSVVKVLGNRRFLVYLRFQPDVIELLRKDLRP 139
Cdd:cd20406   1 LGDKVDAFYNGGWWPGVVTKVLEDNRYLVYLDATKEELEFEHSDLRP 47

Tudor-like domain present in plant sequences; Domain in plant sequences with possible chromatin-associated functions.

                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*....
gi 30695584    228 RDYKLMENVDALVESGWCPGVVSKVLAGKRYAVDLGPNRESKE--FSRLQLRPSIEWKD 284
Cdd:smart00743   1 SDFKEGDRVEVFSEDSWWEAVVTKVLGDGKYLVEYKGESEPLEltVDWSDLRPHPPWVD 59

first and third Tudor-like Agenet domains found in a family of Arabidopsis thaliana DUF724 domain-containing proteins (AtDUFs); The family includes a group of AtDUFs (AtDUF1-3 and AtDUF6-8) that may be involved in the polar growth of plant cells via transportation of RNAs. Members of this family have four Tudor-like Agenet domains, except for AtDUF8, which contains only two copies of the Tudor-like Agenet domain. AtDUF4 and AtDUF5 are not included here due to the lack of a Tudor-like Agenet domain. The model corresponds to the first and third Tudor-like Agenet domains in AtDUF1-3 and AtDUF6-7, as well as the first Tudor-like Agenet domain in AtDUF8. The Tudor domain binds to proteins with dimethylated arginine or lysine residues, and may also bind methylated histone tails to facilitate protein-protein interactions.

                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 30695584  14 SKGSEIEISSQEYeyGSGNVWYCVILEENLAKskRKKLSVRHLDPLLKYDySPPLIKTTVHRFMR 78
Cdd:cd20405   2 SKGTEVEVSSEEE--GFRGSWYRAIVVKEPEG--EKKFLVKYDELLLDDG-SEPLEETVDLRRVR 61

first and third Tudor-like Agenet domains found in a family of Arabidopsis thaliana DUF724 domain-containing proteins (AtDUFs); The family includes a group of AtDUFs (AtDUF1-3 and AtDUF6-8) that may be involved in the polar growth of plant cells via transportation of RNAs. Members of this family have four Tudor-like Agenet domains, except for AtDUF8, which contains only two copies of the Tudor-like Agenet domain. AtDUF4 and AtDUF5 are not included here due to the lack of a Tudor-like Agenet domain. The model corresponds to the first and third Tudor-like Agenet domains in AtDUF1-3 and AtDUF6-7, as well as the first Tudor-like Agenet domain in AtDUF8. The Tudor domain binds to proteins with dimethylated arginine or lysine residues, and may also bind methylated histone tails to facilitate protein-protein interactions.

                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 30695584 161 FSAGKSVEVRTKVDKLGDVWAPAMVIKE-DEDGTMLVKLKTLK-EEEVNCTKISVSYSEIRPSP 222
Cdd:cd20405   1 FSKGTEVEVSSEEEGFRGSWYRAIVVKEpEGEKKFLVKYDELLlDDGSEPLEETVDLRRVRPVP 64

Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];

                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30695584 631 SRIAKILSIKERQTCALEELKAVEEKItenDNKRRKYEEDIVELQRQEVLMKEAKVTLDNEIARMQSQAAVLDQEVQNVD 710
Cdd:COG3883 119 DRLSALSKIADADADLLEELKADKAEL---EAKKAELEAKLAELEALKAELEAAKAELEAQQAEQEALLAQLSAEEAAAE 195

                ....*....
gi 30695584 711 HEFQAILAA 719
Cdd:COG3883 196 AQLAELEAE 204

second and fourth Tudor-like Agenet domains found in the family of Arabidopsis thaliana DUF724 domain-containing proteins (AtDUFs); The family includes a group of AtDUFs (AtDUF1-3 and AtDUF6-8) that may be involved in the polar growth of plant cells via transportation of RNAs. Members of this family have four Tudor-like Agenet domains, except for AtDUF8, which contains only two copies of the Tudor-like Agenet domain. AtDUF4 and AtDUF5 are not included here due to the lack of a Tudor-like Agenet domain. The model corresponds to the second and fourth Tudor-like Agenet domains in AtDUF1-3 and AtDUF6-7, as well as the first Tudor-like Agenet domain in AtDUF8. The Tudor domain binds to proteins with dimethylated arginine or lysine residues, and may also bind methylated histone tails to facilitate protein-protein interactions.

                        10        20        30        40
                ....*....|....*....|....*....|....*....|....*..
gi 30695584  93 EGDVVDAAYKGGWCSGSVVKVLGNRRFLVYLRFQPDVIELLRKDLRP 139
Cdd:cd20406   1 LGDKVDAFYNGGWWPGVVTKVLEDNRYLVYLDATKEELEFEHSDLRP 47

Tudor-like domain present in plant sequences; Domain in plant sequences with possible chromatin-associated functions.

                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*....
gi 30695584    228 RDYKLMENVDALVESGWCPGVVSKVLAGKRYAVDLGPNRESKE--FSRLQLRPSIEWKD 284
Cdd:smart00743   1 SDFKEGDRVEVFSEDSWWEAVVTKVLGDGKYLVEYKGESEPLEltVDWSDLRPHPPWVD 59

first and third Tudor-like Agenet domains found in a family of Arabidopsis thaliana DUF724 domain-containing proteins (AtDUFs); The family includes a group of AtDUFs (AtDUF1-3 and AtDUF6-8) that may be involved in the polar growth of plant cells via transportation of RNAs. Members of this family have four Tudor-like Agenet domains, except for AtDUF8, which contains only two copies of the Tudor-like Agenet domain. AtDUF4 and AtDUF5 are not included here due to the lack of a Tudor-like Agenet domain. The model corresponds to the first and third Tudor-like Agenet domains in AtDUF1-3 and AtDUF6-7, as well as the first Tudor-like Agenet domain in AtDUF8. The Tudor domain binds to proteins with dimethylated arginine or lysine residues, and may also bind methylated histone tails to facilitate protein-protein interactions.

                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 30695584  14 SKGSEIEISSQEYeyGSGNVWYCVILEENLAKskRKKLSVRHLDPLLKYDySPPLIKTTVHRFMR 78
Cdd:cd20405   2 SKGTEVEVSSEEE--GFRGSWYRAIVVKEPEG--EKKFLVKYDELLLDDG-SEPLEETVDLRRVR 61

first and third Tudor-like Agenet domains found in a family of Arabidopsis thaliana DUF724 domain-containing proteins (AtDUFs); The family includes a group of AtDUFs (AtDUF1-3 and AtDUF6-8) that may be involved in the polar growth of plant cells via transportation of RNAs. Members of this family have four Tudor-like Agenet domains, except for AtDUF8, which contains only two copies of the Tudor-like Agenet domain. AtDUF4 and AtDUF5 are not included here due to the lack of a Tudor-like Agenet domain. The model corresponds to the first and third Tudor-like Agenet domains in AtDUF1-3 and AtDUF6-7, as well as the first Tudor-like Agenet domain in AtDUF8. The Tudor domain binds to proteins with dimethylated arginine or lysine residues, and may also bind methylated histone tails to facilitate protein-protein interactions.

                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 30695584 161 FSAGKSVEVRTKVDKLGDVWAPAMVIKE-DEDGTMLVKLKTLK-EEEVNCTKISVSYSEIRPSP 222
Cdd:cd20405   1 FSKGTEVEVSSEEEGFRGSWYRAIVVKEpEGEKKFLVKYDELLlDDGSEPLEETVDLRRVRPVP 64

Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];

                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30695584 631 SRIAKILSIKERQTCALEELKAVEEKItenDNKRRKYEEDIVELQRQEVLMKEAKVTLDNEIARMQSQAAVLDQEVQNVD 710
Cdd:COG3883 119 DRLSALSKIADADADLLEELKADKAEL---EAKKAELEAKLAELEALKAELEAAKAELEAQQAEQEALLAQLSAEEAAAE 195

                ....*....
gi 30695584 711 HEFQAILAA 719
Cdd:COG3883 196 AQLAELEAE 204